BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780350|ref|YP_003064763.1| hypothetical protein
CLIBASIA_01175 [Candidatus Liberibacter asiaticus str. psy62]
         (431 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254780350|ref|YP_003064763.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040027|gb|ACT56823.1| hypothetical protein CLIBASIA_01175 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 431

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 431/431 (100%), Positives = 431/431 (100%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD
Sbjct: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII
Sbjct: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL
Sbjct: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF
Sbjct: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ
Sbjct: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT
Sbjct: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII
Sbjct: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420

Query: 421 PLPEDHPIDSD 431
           PLPEDHPIDSD
Sbjct: 421 PLPEDHPIDSD 431


>gi|150396039|ref|YP_001326506.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150027554|gb|ABR59671.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 443

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 204/404 (50%), Positives = 277/404 (68%), Gaps = 9/404 (2%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L+EIIN       +D+FD   +R    + S+ P+   ETIA  ++AI  YQ I + GGWP
Sbjct: 37  LNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPETIALLQQAILDYQQIAAAGGWP 96

Query: 96  EL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +     + L LG +  +VQ+LR+RL+ISGDL  S G+S +FD+YV+ AVK FQ RHGL 
Sbjct: 97  MVNPASTQRLELGVNDPAVQQLRQRLMISGDLPQSAGISPSFDSYVDGAVKRFQARHGLP 156

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   +L+A+NV    R+ QL+ NL+R++  +   +G RYV+VNIPAA +EAVENG+
Sbjct: 157 ADGVIGEYSLKALNVDASTRLAQLETNLVRLQS-MSGDLGRRYVMVNIPAAYIEAVENGR 215

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSIIQKD+M L+R+DP YL+ N I 
Sbjct: 216 VALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIIQKDIMPLMRKDPTYLERNAIR 275

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D  G EV  E +DW + + PN +FRQDPGKINAM+STKI F++ +  YMHDTP+  LF
Sbjct: 276 LLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINAMSSTKINFHNEHAVYMHDTPQQGLF 335

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  IE  +K+   TP+KLA EVPV+F Y
Sbjct: 336 NKLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQIEGTIKSGVNTPIKLAEEVPVYFTY 395

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP-----EDHPIDSD 431
           I+AWS KD ++QFRDDIY  D      +           PID+D
Sbjct: 396 ITAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIEQSAGPIDAD 439


>gi|227821529|ref|YP_002825499.1| putative amidase [Sinorhizobium fredii NGR234]
 gi|227340528|gb|ACP24746.1| putative amidase [Sinorhizobium fredii NGR234]
          Length = 442

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 202/403 (50%), Positives = 277/403 (68%), Gaps = 8/403 (1%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L E+IN       +D+FD   +R    + S+ P+   +TI   ++AI  YQ I++ GGWP
Sbjct: 37  LGELINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPQTIGHVQQAIFDYQQIVAAGGWP 96

Query: 96  ELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           ++P     L LG +  SVQ+LR+RL++SGDL  S G+S +FD+YV+ AVK FQ RHGL  
Sbjct: 97  QVPQTGARLELGVTDPSVQQLRQRLMVSGDLPRSAGISSSFDSYVDGAVKRFQARHGLPA 156

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++   + +A+NV    R+ QL+ NL+R++  +   +G RYV+VNIPAA +EAVENG+V
Sbjct: 157 DGVIGEYSFKALNVDAATRLAQLETNLVRLQS-MSGDLGRRYVMVNIPAAYIEAVENGRV 215

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSI+QKD+M L+R+DP YL+ N I +
Sbjct: 216 VLRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIVQKDIMPLMRKDPTYLERNAIRL 275

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           +D  G EV  E VDWN+ + PN +FRQDPGKINAM+STKI F++ ++ YMHDTP+  LFN
Sbjct: 276 LDGSGNEVSPETVDWNAEKAPNLMFRQDPGKINAMSSTKINFHNEHSVYMHDTPQQGLFN 335

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
            ++RFE+SGCVRV+N+ DL  WLLK+TP WSR  IE  +KT   TP+KLA EVPV+F YI
Sbjct: 336 KLMRFESSGCVRVQNVRDLSTWLLKETPGWSRQQIEATIKTGVNTPIKLAEEVPVYFTYI 395

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLP-----EDHPIDSD 431
           +AWS KD ++QFRDDIY  D      +            ID+D
Sbjct: 396 TAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIEQSPGAIDAD 438


>gi|15964960|ref|NP_385313.1| hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|307301031|ref|ZP_07580800.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307317765|ref|ZP_07597203.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|15074139|emb|CAC45786.1| Hypothetical protein SMc01769 [Sinorhizobium meliloti 1021]
 gi|306896527|gb|EFN27275.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306903986|gb|EFN34572.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 443

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 205/404 (50%), Positives = 276/404 (68%), Gaps = 9/404 (2%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           L+EIIN       +D+FD   +R    + S+ P+   ETIA  ++AI  YQ I S GGWP
Sbjct: 37  LNEIINSPRRGSWDDQFDAKASRTATAVLSNTPVFGPETIAHLQQAIFDYQQIASAGGWP 96

Query: 96  EL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +     + L +G +  SVQ+LR+RL+ISGDL  S G+S +FD+YV+ AVK FQ RHGL 
Sbjct: 97  MVTPASTQRLEIGVTDPSVQQLRQRLMISGDLPQSAGISSSFDSYVDGAVKRFQARHGLP 156

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++   +L+AMNV    R+ QL+ NL+R++  +   +G RYV+VNIPAA +EAVENG+
Sbjct: 157 ADGVIGEYSLKAMNVDASTRLAQLETNLVRLQS-MSGDLGRRYVMVNIPAAYIEAVENGR 215

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR T IVG++DRQ+PIL+S+I  ++ NPYW  PRSIIQKD+M L+R+DP YL  N I 
Sbjct: 216 VALRHTAIVGKIDRQSPILNSKIYEVILNPYWTAPRSIIQKDIMPLMRKDPTYLARNAIR 275

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D  G EV  E +DW + + PN +FRQDPGKINAM+STKI F++ +  YMHDTP+  LF
Sbjct: 276 LLDGNGNEVSPETIDWQAEKAPNLMFRQDPGKINAMSSTKINFHNEHAVYMHDTPQQGLF 335

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RFE+SGCVRV+N+ DL  WLLK+TP W+R  IE  +K+   TP+KLA EVPV+F Y
Sbjct: 336 NKLMRFESSGCVRVQNVRDLSTWLLKETPGWARQQIEATIKSGVNTPIKLAEEVPVYFTY 395

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP-----EDHPIDSD 431
           I+AWS KD ++QFRDDIY  D      +           PID+D
Sbjct: 396 ITAWSAKDRVVQFRDDIYQRDGAAELALQTTTGIEQSAGPIDAD 439


>gi|110633486|ref|YP_673694.1| twin-arginine translocation pathway signal [Mesorhizobium sp. BNC1]
 gi|110284470|gb|ABG62529.1| Twin-arginine translocation pathway signal [Chelativorans sp. BNC1]
          Length = 419

 Score =  441 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/380 (47%), Positives = 259/380 (68%), Gaps = 1/380 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           D IIN     + +D+FD  ++     + S +P+++ +T    E+AIA Y +I++ GGWP+
Sbjct: 31  DAIINAPRRGVWDDQFDAQISSGRDRVISYLPVLNPQTAVHVEQAIAGYSNIVASGGWPQ 90

Query: 97  LPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +P  + L LG     V+ LR RL++SGDL P  G+S AFD+YV+ A+K FQ+RHGL   G
Sbjct: 91  VPATKKLQLGVIDPDVEALRRRLMVSGDLSPRAGMSPAFDSYVDQALKRFQVRHGLPADG 150

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +    T  A+NV   +R+ QLQ NL R++++  +++G R+V+VNIPAA +EAVENG+V  
Sbjct: 151 VTGRYTFSALNVSAPVRLGQLQTNLGRLREMTSKQLGNRFVMVNIPAAQIEAVENGRVVS 210

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           R T +VG++DRQTP+L S+IN I+ NPYW  P SI++KD++ L+R+DP YL DNNI MI 
Sbjct: 211 RHTAVVGKIDRQTPVLSSKINEIILNPYWNAPVSIVRKDIIPLMRKDPNYLTDNNIRMIA 270

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             G EV    +DW++ E   + FRQDPGKINAMAS KI F +++  YMHDTP+  LF + 
Sbjct: 271 PDGSEVDPLTIDWSTEEAAKYRFRQDPGKINAMASVKINFPNQHAVYMHDTPQQSLFRDQ 330

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            RF +SGCVRV+N+ DL  WLL+DT  W R  IE  +++++   + +A  VPV+FVY+SA
Sbjct: 331 ERFHSSGCVRVQNVRDLVAWLLRDTQGWDRRRIETTIQSQEDIHINVADPVPVYFVYVSA 390

Query: 396 WSPKDSIIQFRDDIYGLDNV 415
           WS  D ++ FRDDIYG D  
Sbjct: 391 WSTGDGVVHFRDDIYGFDGA 410


>gi|13476933|ref|NP_108502.1| hypothetical protein mlr8397 [Mesorhizobium loti MAFF303099]
 gi|14027695|dbj|BAB54288.1| mlr8397 [Mesorhizobium loti MAFF303099]
          Length = 422

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 189/397 (47%), Positives = 264/397 (66%), Gaps = 3/397 (0%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L     +  +     V+ +I+  S     +D+FD   +     + S +PI S +T+A TE
Sbjct: 19  LLAAAMVAGRASAQDVIGDILKSSARGNWDDQFDARASEGGK-VASTLPIFSTQTVAFTE 77

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +A+A YQ+I+ +GGW E+P  + L LG     V  LR+RL++SGDL  S G+S AFD+YV
Sbjct: 78  QAVAQYQNIVGQGGWVEVPATKKLELGVDDPDVVPLRKRLMVSGDLSQSAGISTAFDSYV 137

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           +SAVK FQ+RHGL   G +   T  AMNV   +R+ QLQ NL R+K+     +G RYVLV
Sbjct: 138 DSAVKRFQLRHGLPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKEK-AGTLGSRYVLV 196

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           +IPAA +EAVEN +V LR T IVG++DRQTPI++S+IN I+ NPYW  P SI++KD++ L
Sbjct: 197 DIPAAQIEAVENDRVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVSIVRKDIIPL 256

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           +R+DP YLK+++I +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S 
Sbjct: 257 MRKDPNYLKNSHIRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSP 316

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +  YMHDTP+  LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + T
Sbjct: 317 DGVYMHDTPQQSLFGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGQNT 376

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           P+++   VPVHF+Y+SAWS    ++QFRDD+Y LD  
Sbjct: 377 PIQVTNPVPVHFLYLSAWSTGPGVVQFRDDVYALDGA 413


>gi|209548779|ref|YP_002280696.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534535|gb|ACI54470.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 433

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 196/392 (50%), Positives = 271/392 (69%), Gaps = 5/392 (1%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAF 84
           +       S +D +IN       +D+FD    +R    + S+ PI+  +++A  ++A+  
Sbjct: 27  IAAPAFAQSAIDTLINAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSLASAQQAVMQ 86

Query: 85  YQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           YQ I + GGWPE+      L LG S  +VQ LR+RL I+GDL    G+S AFD+YV+ AV
Sbjct: 87  YQQIAAAGGWPEVNPGDQKLQLGVSHPAVQALRQRLAITGDLPREAGMSSAFDSYVDGAV 146

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           K FQ RHGL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+V+VNIPA
Sbjct: 147 KRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLNTNIIRLQTFP-EDLGRRHVMVNIPA 205

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
           A +EAVE+G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+D
Sbjct: 206 AYVEAVEDGTVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTSPRSIVEKDIMPLMRKD 265

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           P YL+ N I +ID KG EV  E +DWN  E PN +FRQDPGK NAMASTKI FY++N  Y
Sbjct: 266 PTYLEKNAIRLIDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEY 324

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           MHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  +E+V+ +   TPVKL
Sbjct: 325 MHDTPQQGLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQMEQVIASGVNTPVKL 384

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 385 ATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|222148202|ref|YP_002549159.1| hypothetical protein Avi_1609 [Agrobacterium vitis S4]
 gi|221735190|gb|ACM36153.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 410

 Score =  438 bits (1126), Expect = e-121,   Method: Composition-based stats.
 Identities = 194/385 (50%), Positives = 273/385 (70%), Gaps = 2/385 (0%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +  S +DE+IN       +D+FD   +R    + S+ P++S   +   + AI+ YQ I++
Sbjct: 1   MAQSAVDELINARSRGNWDDQFDAQTSRAVASVTSNSPMLSATNLPNLQLAISAYQQIVA 60

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +GGWP++ P   L LG+    VQ+LR+RL+ISGDL    G+S +FD YV+ AVK FQ RH
Sbjct: 61  QGGWPQVNPSVKLKLGSIDPVVQQLRQRLMISGDLGQEAGMSNSFDTYVDGAVKRFQARH 120

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G +   TL+AMN+  D+R+ QL  NL+R++  +   +G RYV+VNIP+ S+EAVE
Sbjct: 121 GLPTDGALGEYTLKAMNISADVRLNQLNTNLVRLQ-AMSGDLGNRYVMVNIPSMSIEAVE 179

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           N +V LR+  +VGR+DR T  ++S+I  ++ NPYW  PRSI++KD++ L+R+DP YL  N
Sbjct: 180 NDRVALRTNAVVGRIDRPTHSINSKIYEVILNPYWTAPRSIVEKDIVPLMRKDPTYLTRN 239

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           NI + D KG+EV  E VDWN+P+ PN +FRQDPGKINAMASTKI F++ NN Y+HDTP+ 
Sbjct: 240 NIRLFDGKGQEVAPETVDWNAPKAPNLMFRQDPGKINAMASTKINFHNPNNEYLHDTPQQ 299

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGC+RV+N+ DL  WLL+DTP W+R  IE V+ TR+   +KL+ EVPV+
Sbjct: 300 GLFNKLMRFESSGCMRVQNVRDLITWLLRDTPGWNRQEIERVISTRQNNVIKLSQEVPVY 359

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
            VYI+AWS KD+++QFRDDIY  D 
Sbjct: 360 IVYITAWSAKDNVVQFRDDIYKRDG 384


>gi|86357145|ref|YP_469037.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
 gi|86281247|gb|ABC90310.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CFN 42]
          Length = 433

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 200/385 (51%), Positives = 271/385 (70%), Gaps = 5/385 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD +IN       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 34  QSALDTLINAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAA 93

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG SS +VQ LR+RL I+GDL    G+S AFD+YV+ AVK FQ RH
Sbjct: 94  GGWPEVNPGDQRLQLGVSSPAVQVLRQRLAITGDLPREAGMSNAFDSYVDGAVKRFQARH 153

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  NL+R++    + +G R+++VNIPAA +EAVE
Sbjct: 154 GLPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTFP-EDLGRRHLMVNIPAAYVEAVE 212

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 213 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 272

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I +ID KG EV  E +DWN  E PN  FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 273 AIRLIDGKGNEVSPETIDWNG-EAPNLQFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 331

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLATEVPV+
Sbjct: 332 GLFNKLMRFESSGCVRVQNVRDLSTWLLRETPGWSRQQMEQVIASGVNTPIKLATEVPVY 391

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
           FVYISAW   D I+QFRDDIY +D 
Sbjct: 392 FVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|190891191|ref|YP_001977733.1| peptidoglycan binding protein (involved in cell wall degradation)
           [Rhizobium etli CIAT 652]
 gi|190696470|gb|ACE90555.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CIAT 652]
 gi|327192107|gb|EGE59084.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli CNPAF512]
          Length = 434

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 201/385 (52%), Positives = 270/385 (70%), Gaps = 5/385 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    G+S AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGMSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  NL+R++    + +G R+V+VNIPAA +EAVE
Sbjct: 155 GLPSDGVLGEFTLKAMNIPADVRLQQLNTNLVRLQTFP-EDLGRRHVMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 273

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I +ID KG EV  E VDWN  E PN  FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 274 AIRLIDGKGNEVAPETVDWNG-EAPNLQFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 332

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ T   TP+KLATEVPV+
Sbjct: 333 GLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIATGVNTPIKLATEVPVY 392

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
           FVYISAW   D I+QFRDDIY +D 
Sbjct: 393 FVYISAWGMPDGIVQFRDDIYQMDG 417


>gi|241204000|ref|YP_002975096.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857890|gb|ACS55557.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 433

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 199/385 (51%), Positives = 271/385 (70%), Gaps = 5/385 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD +IN       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 34  QSALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPILGPQSVASAQQAIMQYQQIAAA 93

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG SS +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 94  GGWPEVNPGDQRLQLGVSSPAVQALRQRLAITGDLPREAGLSNAFDSYVDGAVKRFQARH 153

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 154 GLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTFP-EDLGRRHLMVNIPAAYVEAVE 212

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 213 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 272

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I ++D KG EV  E +DWN  E PN +FRQDPGK NAMASTKI FY++N  YMHDTP+ 
Sbjct: 273 AIRLLDGKGNEVAPETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEYMHDTPQQ 331

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP W+R  +E+V+ T   TPVKLATEVPV+
Sbjct: 332 GLFNKLMRFESSGCVRVQNVRDLSNWLLRETPGWNRQQMEQVIATGVNTPVKLATEVPVY 391

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
           FVYISAW   D I+QFRDDIY +D 
Sbjct: 392 FVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|239831589|ref|ZP_04679918.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239823856|gb|EEQ95424.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 438

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 193/400 (48%), Positives = 267/400 (66%), Gaps = 3/400 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I        +D+FD   A     + ++ P++S +T+   + AI
Sbjct: 36  ASAMVSSAYAQQVLTDVIAAPRRGNWDDQFDAR-ATGGQRVATNQPVLSPQTVGNLQTAI 94

Query: 83  AFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y DI  RGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS +FD YV++A
Sbjct: 95  AQYTDIAGRGGWPSVPGNAKLQIGVTDPAVQALRKRLMISGDLPQEAGLSSSFDTYVDAA 154

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNI 200
           VK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L +Q     R+V+VNI
Sbjct: 155 VKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLADQGMQEQRFVMVNI 214

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 215 PAARIEAVEGGSVVQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQKDIIPLMR 274

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++++ 
Sbjct: 275 KDPQYLAKNKIRLYDQSGQEVAPETVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNQHQ 334

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R  IE  +K+   TP+
Sbjct: 335 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQTIENTIKSGTNTPI 394

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++A  VP+HFVYISAWS  D ++QFRDDIY +D      +
Sbjct: 395 QVADPVPLHFVYISAWSTGDGVVQFRDDIYKMDGATALAL 434


>gi|153009858|ref|YP_001371073.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561746|gb|ABS15244.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 433

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 193/400 (48%), Positives = 267/400 (66%), Gaps = 3/400 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V        L ++I+ S      D+FD   A     + ++ P++S +T+   + AI
Sbjct: 31  ASAMVSSAYAQQALTDVISSSRRGNWADQFDAR-ATGGQRVATNQPVLSPQTVGNLQTAI 89

Query: 83  AFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y DI  RGGWP +P    L +G +  SVQ LR+RL+ISGDL    GLS +FD YV++A
Sbjct: 90  AQYTDIAGRGGWPSVPGNTKLQIGVTDPSVQALRKRLMISGDLPQEAGLSSSFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           VK FQ RHGL   G++   T  AMNV  + R+ QLQ NL R+  L  Q +   R+V+VNI
Sbjct: 150 VKRFQSRHGLPADGVMGQFTYAAMNVDANTRLGQLQTNLQRLSPLANQGLQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTPIL+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVMQRHTAVVGKIDRQTPILNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKINAM+STKI F+++  
Sbjct: 270 KDPQYLAKNKIRLYDQSGQEVAPESIDWNTDDAVKLMFRQDPGKINAMSSTKINFHNQYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTAGWDRQNIESTIKSGTNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +LA  VP+HFVYI+AWS  D ++QFRDDIY +D      +
Sbjct: 390 QLADPVPLHFVYITAWSTGDGVVQFRDDIYKMDGATELAL 429


>gi|260466848|ref|ZP_05813032.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029350|gb|EEW30642.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 417

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 187/388 (48%), Positives = 262/388 (67%), Gaps = 3/388 (0%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
            +     V+ +I+  S     +D+FD   +     + S +PI S +T+A TE+A+A YQ+
Sbjct: 22  GRASAQDVIGDILKSSARGNWDDQFDARASEGGK-VASTLPIFSPQTVAFTEQAVAQYQN 80

Query: 88  ILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           I+ +GGW ++P  + L LG     V  LR+RL+I+GDL  S G+S AFD+YV+SAVK FQ
Sbjct: 81  IVGQGGWVDVPATKKLELGVDDPDVVPLRKRLMIAGDLSQSAGISTAFDSYVDSAVKRFQ 140

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           +RHGL   G +   T  AMNV   +R+ QLQ NL R+K+     +G RYVLV+IPAA +E
Sbjct: 141 LRHGLPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLKEK-AGTLGSRYVLVDIPAAQIE 199

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
           AVEN +V LR T IVG++DRQTPI++S+IN I+ NPYW  P SI++KD++ L+R+DP YL
Sbjct: 200 AVENDRVVLRHTAIVGKIDRQTPIVNSKINEIIVNPYWNAPVSIVRKDIIPLMRKDPDYL 259

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           K+++I +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDT
Sbjct: 260 KNSHIRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDT 319

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P+  LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   V
Sbjct: 320 PQQSLFGKMMRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGQNTPIQVTNPV 379

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           PVHF+Y+SAWS    ++QFRDD+Y LD 
Sbjct: 380 PVHFLYLSAWSTGPGVVQFRDDVYALDG 407


>gi|116251385|ref|YP_767223.1| hypothetical protein RL1618A [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256033|emb|CAK07114.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 433

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 201/385 (52%), Positives = 271/385 (70%), Gaps = 5/385 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD +IN       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 34  QSALDTLINAPRRGNWDDQFDAKAASRTATAMVSNTPILGPQSVASAQQAIMQYQQIAAA 93

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG SS SVQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 94  GGWPEVNPGDQRLQLGVSSPSVQALRQRLAITGDLPREAGLSNAFDSYVDGAVKRFQARH 153

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 154 GLPADGVLGEFTLKAMNIPADVRLQQLNTNVVRLQTFP-EDLGRRHLMVNIPAAYVEAVE 212

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 213 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 272

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I ++D KG EV  E VDWN  E PN +FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 273 AIRLLDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 331

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ T   TP+KLA EVPV+
Sbjct: 332 GLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIATGVNTPIKLAAEVPVY 391

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDN 414
           FVYISAW   D I+QFRDDIY +D 
Sbjct: 392 FVYISAWGMPDGIVQFRDDIYQMDG 416


>gi|90419407|ref|ZP_01227317.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336344|gb|EAS50085.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 447

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 188/403 (46%), Positives = 259/403 (64%), Gaps = 2/403 (0%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
           F +         L       + L E++        +D+FD   + V   + S+ P+ S+ 
Sbjct: 18  FVLGTAAASAAMLPGAAFAQNALGELLQAPTRGNWDDQFDTRGSNVRQ-VASNSPVFSEN 76

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           TI   ++AI  Y  I+  GGWP +P    L +G  S +V  LR+RL I+GDL  + G S 
Sbjct: 77  TIYSLQEAINSYSAIVQGGGWPMVPEGETLKIGVQSRTVPVLRQRLAIAGDLGNNAGGSP 136

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           AFD YV++AVK FQ RHGL   G+V   T +AMNV  DLR+ QLQ NL R+++ L   +G
Sbjct: 137 AFDTYVDAAVKRFQARHGLPADGVVSGHTYKAMNVGADLRLGQLQTNLQRLREKLATDLG 196

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYV+VNIPAAS+EAVENG+V  R T +VG+VDRQTPIL SRI  +  NPYW  P SI++
Sbjct: 197 QRYVVVNIPAASIEAVENGRVVQRHTAVVGKVDRQTPILDSRITNLNLNPYWHAPVSIVR 256

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           KD++ L+++DP YL+ N I + D  G+E+  + +DWN+ E   ++FRQDPGKINAMAS K
Sbjct: 257 KDIIPLMQKDPTYLERNAIRIFDGNGQEIPPQTIDWNTEEAVKYLFRQDPGKINAMASVK 316

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I F + +  YMHDTP+  LF+ ++RFE+SGCVRV+N+ DL VWL +D P W R  IE+V+
Sbjct: 317 INFPNPHAVYMHDTPQQSLFSELMRFESSGCVRVQNVRDLIVWLARDVPGWDRQRIEQVI 376

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             R+   + L   VPVHF Y++AW+   +++QFRDDIY  D V
Sbjct: 377 AARERQDIDLLNPVPVHFTYVTAWATDPTVVQFRDDIYHRDGV 419


>gi|319784167|ref|YP_004143643.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170055|gb|ADV13593.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 417

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 184/384 (47%), Positives = 259/384 (67%), Gaps = 3/384 (0%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
              V+ +I+  S     +D+FD   +     + S +PI S +T+A TE+A+  YQ+I+ +
Sbjct: 26  AQDVIGDILKSSARGNWDDQFDARASEGGK-VASTLPIFSPQTVAFTEQAVGQYQNIVGQ 84

Query: 92  GGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           GGW E+P  + L LG     V  LR+RL++SGDL  S G+S AFD+YV+SAVK FQ+RHG
Sbjct: 85  GGWVEVPATKKLQLGVDDPDVVPLRKRLMVSGDLSQSAGISTAFDSYVDSAVKRFQLRHG 144

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G +   T  AMNV   +R+ QLQ NL R+++     +G RYVLV+IPAA +EAVEN
Sbjct: 145 LPADGSMGKYTYAAMNVSAQIRLGQLQTNLQRLREK-AGTLGSRYVLVDIPAAQVEAVEN 203

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +V LR T IVG++DRQTPI++S+I  I+ NPYW  P SI++KD++ L+R++P YLK+++
Sbjct: 204 DRVVLRHTAIVGKIDRQTPIVNSKITEIIVNPYWNAPVSIVRKDIIPLMRKNPDYLKNSH 263

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           I +    G EV    VDW++ +   + FRQDPG  NAMAS KI F S +  YMHDTP+  
Sbjct: 264 IRLFAPDGSEVDPMNVDWSTDDAAKYRFRQDPGSENAMASVKINFPSPDGVYMHDTPQQS 323

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF  ++RF++SGCVRV+N+ DL  W+L+DTP W R H E  +KT + TP+++   VPVHF
Sbjct: 324 LFGKMLRFDSSGCVRVQNVRDLVTWILRDTPGWDRQHFEAAIKTGENTPIQVTNPVPVHF 383

Query: 391 VYISAWSPKDSIIQFRDDIYGLDN 414
           +Y+SAWS    ++QFRDD+Y LD 
Sbjct: 384 LYLSAWSTGPGVVQFRDDVYALDG 407


>gi|114704835|ref|ZP_01437743.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
 gi|114539620|gb|EAU42740.1| hypothetical protein FP2506_07861 [Fulvimarina pelagi HTCC2506]
          Length = 444

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 182/396 (45%), Positives = 259/396 (65%), Gaps = 2/396 (0%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            +GL +       S LD ++        +D+FD   +     + S  PI S++T+  T+ 
Sbjct: 23  ALGLGMTGFASAQSGLDGLLGARGRGNWDDQFDTRGSSARE-VSSLNPIFSQQTLYSTQA 81

Query: 81  AIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           A+  Y  I+++GGWP +P R  L LG  +  V+ LR+RL ISGDL P    S AFD YVE
Sbjct: 82  AMQTYNQIVAQGGWPTVPARYVLKLGEVTPDVEVLRQRLAISGDLSPQASRSPAFDTYVE 141

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AVK FQ RHGL   G+V     +A+NVP DLR+ QLQ N  R++  L++++  RYV+VN
Sbjct: 142 AAVKRFQARHGLPADGVVGEHAYKALNVPADLRLFQLQTNAARLQNQLQEQLPYRYVMVN 201

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPAA++EAVENG++  R T +VG+VDRQTPIL S+I  +  NPYW  P SI++KD++ L+
Sbjct: 202 IPAAAIEAVENGQIVQRHTAVVGKVDRQTPILTSKITNLNLNPYWHAPASIVRKDIIPLV 261

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           RQDP YL+ N IH+ +  G+EV  + +DW+S E  +++FRQ+PG  +AMAS KI F + +
Sbjct: 262 RQDPTYLQRNGIHIFNGNGQEVPPQSIDWSSDEAVSYLFRQNPGPNSAMASVKINFPNEH 321

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             YMHDTP+  LF+ ++RFE+SGCVRV+N+ DL VWL +D P W+R  IE V+  R    
Sbjct: 322 AVYMHDTPQKGLFSELMRFESSGCVRVQNVRDLIVWLARDEPNWNRQAIERVISARSRED 381

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + LA  VPV+F Y++ W+   +++QFRDDIY  D  
Sbjct: 382 IDLANPVPVYFTYVTGWATDPNVVQFRDDIYHRDGA 417


>gi|315122226|ref|YP_004062715.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495628|gb|ADR52227.1| hypothetical protein CKC_02390 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 431

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 296/430 (68%), Positives = 360/430 (83%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           M+ YLKI  +++ FF YLIL MGL LV+ P+ A +LDEI  ESYH+ V++RFD  L+R D
Sbjct: 1   MISYLKIINVVHRFFTYLILLMGLFLVKYPVRADILDEITKESYHANVDNRFDTLLSRPD 60

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           +GIDS   I+S ETI  TEKAI FYQDI+SRGGW +L  RPL LG+SSV VQ+LRERLII
Sbjct: 61  IGIDSYAAIVSNETITNTEKAIVFYQDIVSRGGWQQLANRPLRLGDSSVLVQKLRERLII 120

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDLD SKG S  FD+YVESAVK FQ RHGL P G+VD +TL+A+NVP DLR+RQL+VNL
Sbjct: 121 SGDLDSSKGFSSVFDSYVESAVKFFQARHGLFPDGVVDIATLKAINVPADLRLRQLRVNL 180

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +RI  LL++KMG RYVL+NIP+AS+EAVEN KV LRS  IVGR+DRQTPILHS+I+RIM 
Sbjct: 181 LRISNLLKRKMGSRYVLINIPSASMEAVENDKVALRSVAIVGRIDRQTPILHSKIDRIML 240

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NPYWVIPRSII+KD++ L+R+ P+YLK++NIH+I++KGKEV  E+VDWNS + P+FIFRQ
Sbjct: 241 NPYWVIPRSIIKKDLVELVRESPEYLKESNIHIINDKGKEVLPEDVDWNSADLPHFIFRQ 300

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           D GK NAMASTKIEFYS+NN+YMHDTPEP LF+   RFETSGCVRV+NIIDL+VWLLK+ 
Sbjct: 301 DSGKNNAMASTKIEFYSQNNSYMHDTPEPFLFSQTARFETSGCVRVKNIIDLNVWLLKNM 360

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P WSR+ IEEV+KTRKTTPVKL  EV +HFVYISAWS KD ++QFRDD+YGLDNV++  I
Sbjct: 361 PGWSRHDIEEVIKTRKTTPVKLDKEVLIHFVYISAWSTKDLVVQFRDDVYGLDNVYIDSI 420

Query: 421 PLPEDHPIDS 430
           PLP  +P++S
Sbjct: 421 PLPGKYPVNS 430


>gi|260563801|ref|ZP_05834287.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260153817|gb|EEW88909.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 433

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/391 (49%), Positives = 267/391 (68%), Gaps = 3/391 (0%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI  Y
Sbjct: 34  MVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAIVQY 92

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+K 
Sbjct: 93  TDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAALKR 152

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNIPAA 203
           FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIPAA
Sbjct: 153 FQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIPAA 212

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+DP
Sbjct: 213 RIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRKDP 272

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    YM
Sbjct: 273 EYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAVYM 332

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++LA
Sbjct: 333 HDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQLA 392

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 393 DPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|17987476|ref|NP_540110.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|17983172|gb|AAL52374.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 400

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/391 (49%), Positives = 267/391 (68%), Gaps = 3/391 (0%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI  Y
Sbjct: 1   MVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAIVQY 59

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+K 
Sbjct: 60  TDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAALKR 119

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNIPAA 203
           FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIPAA
Sbjct: 120 FQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIPAA 179

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+DP
Sbjct: 180 RIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRKDP 239

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    YM
Sbjct: 240 EYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAVYM 299

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++LA
Sbjct: 300 HDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQLA 359

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 360 DPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 390


>gi|15888502|ref|NP_354183.1| hypothetical protein Atu1164 [Agrobacterium tumefaciens str. C58]
 gi|15156204|gb|AAK86968.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 443

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 192/380 (50%), Positives = 274/380 (72%), Gaps = 3/380 (0%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANTSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P   + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPTSQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+  +   +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQS-MSGDLGQRHMMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S++  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKVYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTTVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ +R  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIASRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AWS KD ++QFRDDIYG D 
Sbjct: 397 AWSAKDGVVQFRDDIYGKDG 416


>gi|161618731|ref|YP_001592618.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|254701537|ref|ZP_05163365.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           5 str. 513]
 gi|254704086|ref|ZP_05165914.1| peptidoglycan binding domain-containing protein [Brucella suis bv.
           3 str. 686]
 gi|254709878|ref|ZP_05171689.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|254713879|ref|ZP_05175690.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M644/93/1]
 gi|254717064|ref|ZP_05178875.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M13/05/1]
 gi|256031370|ref|ZP_05444984.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M292/94/1]
 gi|256060880|ref|ZP_05451040.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|256369195|ref|YP_003106703.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260566666|ref|ZP_05837136.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|261218874|ref|ZP_05933155.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261317420|ref|ZP_05956617.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261321627|ref|ZP_05960824.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261752087|ref|ZP_05995796.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261754746|ref|ZP_05998455.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|161335542|gb|ABX61847.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
 gi|255999355|gb|ACU47754.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260156184|gb|EEW91264.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260923963|gb|EEX90531.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261294317|gb|EEX97813.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261296643|gb|EEY00140.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261741840|gb|EEY29766.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261744499|gb|EEY32425.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 433

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|225852279|ref|YP_002732512.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|256044450|ref|ZP_05447354.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256113294|ref|ZP_05454162.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256264215|ref|ZP_05466747.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|225640644|gb|ACO00558.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|263094459|gb|EEZ18281.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408784|gb|ADZ65849.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538502|gb|ADZ86717.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 433

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/391 (49%), Positives = 267/391 (68%), Gaps = 3/391 (0%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI  Y
Sbjct: 34  MVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAIVQY 92

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+K 
Sbjct: 93  TDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAALKR 152

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNIPAA 203
           FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIPAA
Sbjct: 153 FQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIPAA 212

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+DP
Sbjct: 213 RIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRKDP 272

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    YM
Sbjct: 273 EYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAVYM 332

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++LA
Sbjct: 333 HDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQLA 392

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 393 DPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|148558991|ref|YP_001258743.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261324878|ref|ZP_05964075.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|265988457|ref|ZP_06101014.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|148370248|gb|ABQ60227.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|261300858|gb|EEY04355.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|264660654|gb|EEZ30915.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 446

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 44  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|265990871|ref|ZP_06103428.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265994707|ref|ZP_06107264.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262765820|gb|EEZ11609.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001655|gb|EEZ14230.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 446

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 195/391 (49%), Positives = 267/391 (68%), Gaps = 3/391 (0%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI  Y
Sbjct: 47  MVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAIVQY 105

Query: 86  QDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A+K 
Sbjct: 106 TDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAALKR 165

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNIPAA 203
           FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNIPAA
Sbjct: 166 FQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNIPAA 225

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R+DP
Sbjct: 226 RIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMRKDP 285

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++    YM
Sbjct: 286 EYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYAVYM 345

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP++LA
Sbjct: 346 HDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPIQLA 405

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 406 DPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|254718880|ref|ZP_05180691.1| peptidoglycan binding domain-containing protein [Brucella sp.
           83/13]
 gi|265983867|ref|ZP_06096602.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306838784|ref|ZP_07471617.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
 gi|264662459|gb|EEZ32720.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306406135|gb|EFM62381.1| peptidoglycan-binding protein [Brucella sp. NF 2653]
          Length = 433

 Score =  428 bits (1100), Expect = e-118,   Method: Composition-based stats.
 Identities = 196/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|23501649|ref|NP_697776.1| peptidoglycan-binding protein [Brucella suis 1330]
 gi|23347568|gb|AAN29691.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
          Length = 433

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAACIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|256159492|ref|ZP_05457260.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M490/95/1]
 gi|256254778|ref|ZP_05460314.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260168504|ref|ZP_05755315.1| peptidoglycan-binding protein, putative [Brucella sp. F5/99]
 gi|261757974|ref|ZP_06001683.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261737958|gb|EEY25954.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 433

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|222085506|ref|YP_002544036.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
 gi|221722954|gb|ACM26110.1| peptidoglycan binding protein [Agrobacterium radiobacter K84]
          Length = 437

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 202/393 (51%), Positives = 272/393 (69%), Gaps = 4/393 (1%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMG-IDSDIPIISKETIAQTEKAIAFYQDILSRGGW 94
           LD +IN       +D+FD   A      + S+ PI+  +++   ++AIA YQ+I + GGW
Sbjct: 40  LDALINNRARGNWDDQFDAKAAARTAAAVQSNTPILGPDSVPNIQQAIAQYQNIAANGGW 99

Query: 95  PELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++      L LG +  +VQ LR+ L+++GDL    G+S AFD+YV+ AVK FQ RHGL 
Sbjct: 100 PQITPGDQKLQLGVTDGAVQALRQHLMVTGDLPREAGISSAFDSYVDGAVKRFQARHGLP 159

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P G++   TL+AMN+P ++R++QL  NL+R++      +G R+V+VNIPA  +EAVE+G+
Sbjct: 160 PDGVLGDFTLKAMNIPANVRLQQLNTNLVRLQTFPA-DLGRRHVMVNIPATRVEAVEDGQ 218

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V LR   IVGR  R T +++S+I  ++ NPYW  PRSII KD+M L+R+DP YL  NNI 
Sbjct: 219 VALRHEAIVGRESRPTHLINSKIYEVILNPYWTAPRSIIIKDIMPLMRKDPTYLSKNNIR 278

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++D KG+EV  E +DWNS + PN +FRQDPGK NAMASTKI FY+ NN YMHDTPE  LF
Sbjct: 279 LLDGKGQEVAPETIDWNSDKAPNLMFRQDPGKTNAMASTKINFYNPNNEYMHDTPEQGLF 338

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           N ++RF++SGCVRV+N+ DL  WLL DTP W R HIE+V+ TR  TP+KLATEVPV+FVY
Sbjct: 339 NKLMRFDSSGCVRVQNVRDLATWLLTDTPGWPRQHIEQVISTRVNTPIKLATEVPVYFVY 398

Query: 393 ISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
           ISAWS  D I+QFRDDIY LD      +   + 
Sbjct: 399 ISAWSAADGIVQFRDDIYNLDGNSQLALDTTQG 431


>gi|254707013|ref|ZP_05168841.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M163/99/10]
 gi|261314480|ref|ZP_05953677.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261303506|gb|EEY07003.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
          Length = 433

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E +DWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESMDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|225627262|ref|ZP_03785299.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|261221958|ref|ZP_05936239.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|265997921|ref|ZP_06110478.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|225617267|gb|EEH14312.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|260920542|gb|EEX87195.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|262552389|gb|EEZ08379.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 446

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 44  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +   VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPVVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|306843707|ref|ZP_07476307.1| peptidoglycan-binding protein [Brucella sp. BO1]
 gi|306276017|gb|EFM57726.1| peptidoglycan-binding protein [Brucella sp. BO1]
          Length = 433

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 195/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L        R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDAMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|306841990|ref|ZP_07474664.1| peptidoglycan-binding protein [Brucella sp. BO2]
 gi|306287918|gb|EFM59335.1| peptidoglycan-binding protein [Brucella sp. BO2]
          Length = 433

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 196/394 (49%), Positives = 268/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DPQYL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPQYLTKNKIRLYDQSGQEVLPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|62289715|ref|YP_221508.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
 gi|82699644|ref|YP_414218.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189023964|ref|YP_001934732.1| peptidoglycan binding domain protein [Brucella abortus S19]
 gi|254697160|ref|ZP_05158988.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           2 str. 86/8/59]
 gi|254730056|ref|ZP_05188634.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           4 str. 292]
 gi|260545531|ref|ZP_05821272.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260757741|ref|ZP_05870089.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761566|ref|ZP_05873909.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|62195847|gb|AAX74147.1| peptidoglycan-binding protein, hypothetical [Brucella abortus bv. 1
           str. 9-941]
 gi|82615745|emb|CAJ10741.1| Putative peptidoglycan binding domain 1:Twin-arginine translocation
           pathway signal [Brucella melitensis biovar Abortus 2308]
 gi|189019536|gb|ACD72258.1| Putative peptidoglycan binding domain protein [Brucella abortus
           S19]
 gi|260096938|gb|EEW80813.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260668059|gb|EEX54999.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260671998|gb|EEX58819.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 433

 Score =  427 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|163843034|ref|YP_001627438.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673757|gb|ABY37868.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 433

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 193/394 (48%), Positives = 266/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L        R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTTQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQD GKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDSGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|237815203|ref|ZP_04594201.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
 gi|237790040|gb|EEP64250.1| peptidoglycan-binding protein [Brucella abortus str. 2308 A]
          Length = 446

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 44  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|254693508|ref|ZP_05155336.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           3 str. Tulya]
 gi|261213768|ref|ZP_05928049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915375|gb|EEX82236.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 433

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/394 (49%), Positives = 267/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGLNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|294852125|ref|ZP_06792798.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
 gi|294820714|gb|EFG37713.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
          Length = 433

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 194/394 (49%), Positives = 269/394 (68%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL   G++   T  A+NV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADGVMGQFTYAAVNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV +E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPLESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+TP W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTPGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|325292539|ref|YP_004278403.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
 gi|325060392|gb|ADY64083.1| hypothetical protein AGROH133_05364 [Agrobacterium sp. H13-3]
          Length = 443

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 196/402 (48%), Positives = 278/402 (69%), Gaps = 8/402 (1%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           ++++  S     +D+FD   +R  +G+ S+ P++ +E     ++AI  YQ I+  GGWP+
Sbjct: 38  NDLMGSSRRGNWDDQFDANSSRSAVGVVSNNPVLGREAPVYMQQAIMQYQQIVQNGGWPD 97

Query: 97  LP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +P   + L +G S  SVQ LR+RL++SGDL    G+S AFD+YV+ A+K FQ RHGL   
Sbjct: 98  VPVTQQRLQIGVSDPSVQALRQRLMVSGDLPREAGISSAFDSYVDGALKRFQARHGLPAD 157

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+    T +A+NV   +R+ QLQ NL+RI+  +   +G R+++VNIPAA++EAVEN +V 
Sbjct: 158 GVSGEYTTKALNVSAQIRLAQLQTNLVRIQS-MSGDLGQRHLMVNIPAAAIEAVENERVV 216

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           LR+T +VGR  R T +++S+I  ++ NPYW  PRSI++KD++ L+++DP YL+ NNI +I
Sbjct: 217 LRNTAVVGRASRPTHVINSKIYEVILNPYWTAPRSIVEKDIVPLMQKDPTYLERNNIRLI 276

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           D KG+EV    VDW +P+ PN +FRQDPGKINAM+STKI F++ NN YMHDTP+  LFN 
Sbjct: 277 DGKGQEVSPTAVDWFAPKAPNLMFRQDPGKINAMSSTKINFHNPNNEYMHDTPQQGLFNK 336

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           ++RFE+SGCVRV+N+ DL  WLL+DTP WSR  +E V+ TR  TP+KLA EVPV+FVYI+
Sbjct: 337 LMRFESSGCVRVQNVRDLTSWLLRDTPGWSRQEMERVIATRVNTPIKLAQEVPVYFVYIT 396

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPED-----HPIDSD 431
           AWS KD ++QFRDDIY  D      +           P+D D
Sbjct: 397 AWSAKDGVVQFRDDIYEKDGNAELALNTTTGIEQPAGPVDDD 438


>gi|304391945|ref|ZP_07373887.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296174|gb|EFL90532.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 421

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 182/387 (47%), Positives = 248/387 (64%), Gaps = 3/387 (0%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +  + +D I+N       ND FD   A     + +  PI + +TI   ++AIA Y +I+
Sbjct: 29  ALAETAIDRILNAPNRDSWNDSFD-ATAPTKAKVVTSTPIFAPQTIDSVQQAIAEYSNIV 87

Query: 90  SRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
             GGWP +P    L LG S  +V+ LR+RLIISGDL    G+S  FD YV++AVK FQ R
Sbjct: 88  RNGGWPRVPAGKKLELGVSDDAVRALRQRLIISGDLPRGAGVSPQFDTYVDAAVKRFQAR 147

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   +  A+NV   +R+ QLQ NL+R+K  +   +G RYV+VNIPAA +EAV
Sbjct: 148 HGLPSDGVMGRYSFAALNVSAPIRLGQLQTNLVRLK-AMSGYLGDRYVMVNIPAAEIEAV 206

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E G+V  R T IVGR  RQTPIL+S+I  +  NPYW  P+SII KD++ L+R++P YL +
Sbjct: 207 ELGRVAQRHTAIVGRESRQTPILNSKIYELNLNPYWTAPKSIILKDIIPLMRKNPNYLTE 266

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N I + D   +EV  + V+WN+ E     FRQ+PG+INAM S KI F + +  YMHDTP+
Sbjct: 267 NKILLFDGNSQEVSPQSVNWNTEEAVKLRFRQEPGRINAMGSVKINFPNPHAVYMHDTPQ 326

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             +FN ++RFE+SGCVRV+N+ DL VWL KDTP  SR +IE ++ +   T +KL   VPV
Sbjct: 327 KGIFNKLLRFESSGCVRVKNVRDLLVWLAKDTPGASRSNIESIIASGDRTDLKLTAPVPV 386

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDNV 415
           +F Y+SAWS    +  FRDDIY  D V
Sbjct: 387 YFAYVSAWSNTSGVAHFRDDIYQRDGV 413


>gi|254689025|ref|ZP_05152279.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           6 str. 870]
 gi|256257275|ref|ZP_05462811.1| Putative peptidoglycan binding domain protein [Brucella abortus bv.
           9 str. C68]
 gi|260754520|ref|ZP_05866868.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297248121|ref|ZP_06931839.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|260674628|gb|EEX61449.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|297175290|gb|EFH34637.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
          Length = 433

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 193/394 (48%), Positives = 266/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 31  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 89

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 90  VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 149

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 150 LKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 209

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 210 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 269

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 270 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 329

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 330 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 389

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 390 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 423


>gi|260883548|ref|ZP_05895162.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873076|gb|EEX80145.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 446

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 193/394 (48%), Positives = 266/394 (67%), Gaps = 3/394 (0%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
             ++V       VL ++I+       +D+FD   A     + ++ P++S +T+A  + AI
Sbjct: 44  ASAMVSSAYAQQVLSDVISSPRRGNWDDQFDAR-ATGGRRVATNQPVLSPQTVADIQNAI 102

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y DI SRGGWP +P    L +G +  +VQ LR+RL+ISGDL    GLS AFD YV++A
Sbjct: 103 VQYTDIASRGGWPLVPGNARLQIGVNDPAVQYLRKRLMISGDLPQEAGLSTAFDTYVDAA 162

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM-GLRYVLVNI 200
           +K FQ RHGL    ++   T  AMNV V+ R+ QLQ NL R+  L    M   R+V+VNI
Sbjct: 163 LKRFQARHGLPADAVMGQFTYAAMNVDVNTRLGQLQTNLQRLAPLANDTMQEQRFVMVNI 222

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PAA +EAVE G V  R T +VG++DRQTP+L+S+I+ ++ NPYW  P+SIIQKD++ L+R
Sbjct: 223 PAARIEAVEGGSVIQRHTAVVGKIDRQTPLLNSKIHEVILNPYWTAPKSIIQKDIIPLMR 282

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP+YL  N I + D+ G+EV  E VDWN+ +    +FRQDPGKINAM+STKI F++   
Sbjct: 283 KDPEYLTKNKIRLYDQSGQEVPPESVDWNTDDAVKLMFRQDPGKINAMSSTKINFHNPYA 342

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            YMHDTP+   FN ++RF++SGCVRV+N+ DLDVWLLK+T  W R +IE  +K+   TP+
Sbjct: 343 VYMHDTPQKSYFNKLMRFDSSGCVRVQNVRDLDVWLLKNTLGWDRQNIEATIKSGVNTPI 402

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +LA  VP+HFVYISAWS  D ++QFRDDIY +D 
Sbjct: 403 QLADPVPLHFVYISAWSTGDGVVQFRDDIYKMDG 436


>gi|209965708|ref|YP_002298623.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
 gi|209959174|gb|ACI99810.1| peptidoglycan binding domain protein, putative [Rhodospirillum
           centenum SW]
          Length = 596

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 120/419 (28%), Positives = 193/419 (46%), Gaps = 16/419 (3%)

Query: 20  LPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L  G  L    +  S +D E+I E                A     + +  P        
Sbjct: 152 LLFGRDLAAGRLDPSRIDPELIVERQEPDPQALLRQVAEAADPGGAVRAMAPARP--EYR 209

Query: 77  QTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           +   A+A Y+ + + GGW  +P     L  G S   V  LR RL  +G+L P+       
Sbjct: 210 RLRAALAAYRTLAAAGGWLAVPTGGETLKPGQSDPRVPALRARLAATGELSPAAPAPADP 269

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +E+AV+LFQ R+GL+P G V   ++ A+NV    R+ Q+++N+ R + L    +
Sbjct: 270 QFYDPALEAAVRLFQSRNGLEPDGAVGRQSVAALNVTAQQRVTQIEINMERWRWLPA-DL 328

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  Y++VN+ A  L   E  +    + ++VG    +TP+    +  +  NPYW +P SI 
Sbjct: 329 GPSYLIVNLAAFELAVFEGDRPVHTARIVVGAPFTRTPVFSESMTYLELNPYWNVPPSIA 388

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + ++    R+DP YL      ++ +  +    V    VDW       +  RQ PG  N++
Sbjct: 389 RDEIFPKARKDPGYLARRGYELLSDWSETAVPVDPATVDWRHGNLNRYKVRQKPGDTNSL 448

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--DTPTWSRY 366
              K  F +R N Y+HDTP   LF    R  + GC+RV N +DL   +L+   T  W R 
Sbjct: 449 GRIKFMFPNRFNVYLHDTPSKRLFERANRTFSHGCMRVENPLDLAETVLRLTGTTGWDRA 508

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
            ++  +   +   V+L   +PVH  Y++A+  +D  + FR DIYG D      +  P+ 
Sbjct: 509 RLDAAIAGDQRQVVRLRRPLPVHVTYVTAFVEEDGTVAFRPDIYGRDTTLAAALAAPQG 567


>gi|118587981|ref|ZP_01545391.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
 gi|118439603|gb|EAV46234.1| hypothetical protein SIAM614_10408 [Stappia aggregata IAM 12614]
          Length = 434

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 159/379 (41%), Positives = 245/379 (64%), Gaps = 5/379 (1%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-- 98
            ++      D FD     +   + S  P +S +T      AI  YQ I+  GGW  +   
Sbjct: 50  AQNQQVEWADNFDIATDHITE-VKSSAPTLSPQTADYIAAAIDRYQRIVQAGGWGTVSTG 108

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L +G     V  LR RL++SGDL+   GLS  FD+YV++ ++ FQ+RHGL P G++ 
Sbjct: 109 GKALRIGAKDPRVVELRRRLMVSGDLEQQAGLSDTFDSYVDAGLRRFQLRHGLIPDGVMG 168

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            ST+ A+N+P D+R+RQL+ N++R++ +    +G RYV+VNIPAA +EAVENG V  R T
Sbjct: 169 DSTVTALNIPADVRLRQLETNMIRMRSMSGF-LGDRYVMVNIPAAEIEAVENGMVRSRHT 227

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
            +VG++DRQTPIL+S+I  + FNPYW +P+SII+KD++  +++DPQYL  NNI + D   
Sbjct: 228 AVVGKIDRQTPILNSKIYELNFNPYWTVPKSIIRKDLIPKMKEDPQYLAKNNIRIFDWSN 287

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
            E+  +++DWN+ E   + F QDPG  N++ S +I F++++  Y+HDTP   LF    RF
Sbjct: 288 NELTWQQIDWNTDEATQYRFTQDPGSENSLGSVRINFHNKHQVYLHDTPSKTLFGEANRF 347

Query: 339 ETSGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
            +SGCVRV+N+ +L  WLL+  TP W R  ++ V++T +   VKL +++P++  YI+AW+
Sbjct: 348 HSSGCVRVQNVRELVTWLLQSTTPDWDRGRVDGVIRTGEREDVKLKSQIPLYLTYITAWA 407

Query: 398 PKDSIIQFRDDIYGLDNVH 416
             D ++ FRDDIY  D+++
Sbjct: 408 NADGVVHFRDDIYDRDDLY 426


>gi|182677877|ref|YP_001832023.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633760|gb|ACB94534.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 456

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 169/401 (42%), Positives = 261/401 (65%), Gaps = 10/401 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSI--VNDRFDNFLARVDMGIDSDIPIISKETI 75
           ++L MGL L + P+  S     +   Y S      R+D   A + + + S++P++S +T+
Sbjct: 33  ILLAMGLCLSQLPLQVS---SALAGPYGSQAEWAQRYDTD-ANLAV-LRSNVPVLSVQTL 87

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             TE+AI  Y++I++RGGW  +     L LG ++ +V  LR+RLI +GDLD S G S  F
Sbjct: 88  NATEQAIETYRNIVARGGWNRVSASATLKLGANNAAVTELRKRLIETGDLDASAGTSPIF 147

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+YV++ V+ FQ RHGL  +G+V+  T+ AMNVP D+R+ QL+VNL+R++      +G R
Sbjct: 148 DSYVDAGVRHFQARHGLAETGIVNRETVTAMNVPADVRLHQLEVNLVRLRSY-SGNLGER 206

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V+ NIPA ++E VENG V       VG++DRQ+P++ +R   I FNPYW +P SII+KD
Sbjct: 207 FVMANIPAMAVETVENGVVATHHIAGVGKIDRQSPVMMTRATDINFNPYWTVPASIIRKD 266

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKI 313
           ++  +++DP YL D+ I + ++ G+E+   +V+WNS E  N+ FRQDPG  IN++   +I
Sbjct: 267 LIPRMQKDPNYLSDHKIRIFNKDGQELQSSQVNWNSLEATNYRFRQDPGGDINSLGVVRI 326

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP W R HI+E ++
Sbjct: 327 NIANPYGVYMHDTPEKGVFGDDERFVSSGCIRVQNVRDYVTWLLKDTPGWDRAHIDEAIR 386

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + +    K+ + VPV++VY++AW+  D ++QFR+DIY  D 
Sbjct: 387 SGQRIDAKITSSVPVYWVYVTAWATPDGLVQFREDIYQRDG 427


>gi|328543533|ref|YP_004303642.1| Twin-arginine translocation pathway signal [polymorphum gilvum
           SL003B-26A1]
 gi|326413277|gb|ADZ70340.1| Twin-arginine translocation pathway signal [Polymorphum gilvum
           SL003B-26A1]
          Length = 415

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 171/403 (42%), Positives = 258/403 (64%), Gaps = 5/403 (1%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            G+    + + AS L+ +   +      DRFD         I S  P +S ET      A
Sbjct: 8   FGIGAGVQSVTASPLEALRQYNQRIEWEDRFD-ATMESLEAIKSSKPTLSPETADYLAAA 66

Query: 82  IAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           I  YQ I+ +GGW ++      L +G    SV  LR RLI SGDL+ + GLS  FD+YV+
Sbjct: 67  INRYQFIVQQGGWGKVQSSRHGLRIGAQDASVVALRRRLIASGDLEQTAGLSDTFDSYVD 126

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +AV+ FQ+RHGL P G+V  +T+ A+NVP ++R++QL+ NL+R++ +    +G RYV+VN
Sbjct: 127 AAVRRFQVRHGLIPDGVVGQTTVVALNVPAEVRLQQLETNLVRLRSMSGF-LGDRYVMVN 185

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IPAA +EAVENG+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++  +
Sbjct: 186 IPAAEIEAVENGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKM 245

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           ++DP+YL  N I + D K  E+  +++DWN+ E   + FRQ+PG IN++ S +I F++++
Sbjct: 246 KEDPEYLAKNKIRIFDWKNNELSWQQIDWNTDEATQYQFRQEPGDINSLGSVRINFHNQH 305

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTT 378
             Y+HDTP   LF +  RF +SGCVRV+N+ +L  W+L+  TP WSR  ++E ++     
Sbjct: 306 QVYLHDTPSKSLFGSDYRFHSSGCVRVQNVRELVTWMLESTTPDWSRARVDETIRMGVRE 365

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            VKL T+VP++  Y++AWS  + I+ FRDDIY  D ++   + 
Sbjct: 366 DVKLKTQVPLYMTYVTAWSTDEGIVHFRDDIYNRDGLYANEVA 408


>gi|217978266|ref|YP_002362413.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217503642|gb|ACK51051.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 447

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 168/421 (39%), Positives = 255/421 (60%), Gaps = 17/421 (4%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +   L +G SL    + A   D+            R+D    R+ +   S+ P++S++T+
Sbjct: 18  ILTGLCLGASLPA--LAAGYSDQA-------EWAQRYDAAP-RLAV-TRSNTPVLSQQTL 66

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A TE+AI  Y+ I++ GGW  +P    L LG S  SV  LR+RL+ SGDLD S G S  F
Sbjct: 67  AATEQAIETYRQIVASGGWNMVPASNVLKLGVSGPSVVALRKRLVASGDLDASAGASPVF 126

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D++VE+ VK FQ RHGL  +G+V   T  A+N   DLR+ QL++NL+R++      +G R
Sbjct: 127 DSFVEAGVKHFQARHGLLETGLVSKDTFAALNATADLRLHQLEINLIRLRSY-SGNLGER 185

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V+ NIPA ++E VENG V       VG++DRQ+P++ ++   I FNP+W +P S+I+KD
Sbjct: 186 FVMANIPAMAVETVENGAVATHHAAGVGKIDRQSPVMMTKATDINFNPFWTMPPSLIKKD 245

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKI 313
           ++  ++++P YL ++ I + D+  +EV   ++DW + +  N+ +RQDPG  IN++   +I
Sbjct: 246 LIPRMQKNPDYLTEHKIRIFDKDNQEVPPSQIDWTTNQATNYRYRQDPGGDINSLGVVRI 305

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    YMHDTPE  +F +  RF +SGC+RV+N+ D   WLLKDTP W R HI+E ++
Sbjct: 306 NISNPYGVYMHDTPEKGVFGDDFRFVSSGCIRVQNVRDYVAWLLKDTPGWDREHIDEAIR 365

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN---VHVGIIPLPEDHPIDS 430
           + +    KLAT VPV++VYI+AWS  + +IQFRDDIY  D         +  P +  I  
Sbjct: 366 SGQRIDAKLATPVPVYWVYITAWSTPEGLIQFRDDIYQRDGFGPTASSGVGAPLEQAIQP 425

Query: 431 D 431
           D
Sbjct: 426 D 426


>gi|254502740|ref|ZP_05114891.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222438811|gb|EEE45490.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 408

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 157/376 (41%), Positives = 244/376 (64%), Gaps = 6/376 (1%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--IRP 101
                 D FD     +   + S  P +S  T+     AI  YQ I+  GGW  +    + 
Sbjct: 26  QDLEWADSFDIATDNITE-VKSYAPTLSPTTVDYIGAAITRYQSIVQMGGWGTVSTGGKA 84

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V ++R+RLIISGDL+   GLS  FD+YV++A++ FQ+RHGL P G++  ST
Sbjct: 85  LRIGMKDPRVVQVRQRLIISGDLEQQAGLSDTFDSYVDAALRRFQLRHGLIPDGVMGEST 144

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +EA+N+P  +R+RQL+ NL+R++  +   +G RYV+VNIPAA +EAVE+G+V  R T +V
Sbjct: 145 VEALNIPAYVRLRQLETNLVRVRS-MSGNLGDRYVMVNIPAAEIEAVEDGRVRSRHTAVV 203

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKE 280
           G++DRQTPIL+S+I  + FNPYW +P SII+KD++  +++DP+YL  N I + +    +E
Sbjct: 204 GKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKMKEDPEYLSRNKIRIFNWRDNQE 263

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V  +++DWN+ E   + F QDPG+ N++ S +I F++++  Y+HDTP   LF    RF +
Sbjct: 264 VAWQQIDWNTDEATQYRFTQDPGQENSLGSVRINFHNKHQVYLHDTPSKTLFGEDYRFHS 323

Query: 341 SGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           SGCVRV+N+ +L  WLL+  TP W R  ++ V++T +   VKL   +P++  Y++AW+  
Sbjct: 324 SGCVRVQNVRELVTWLLQSTTPDWDRTKVDSVIRTGEREDVKLKRSIPLYMTYVTAWANA 383

Query: 400 DSIIQFRDDIYGLDNV 415
           D ++ FR+DIY  D++
Sbjct: 384 DGVVHFREDIYNRDDL 399


>gi|218662321|ref|ZP_03518251.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli IE4771]
          Length = 495

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 188/367 (51%), Positives = 258/367 (70%), Gaps = 5/367 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTATAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 155 GLPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTFP-EDLGRRHLMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +G V  R T +VGR+ R T +++S+I  ++ NPYW  PRSI++KD+M L+R+DP YL+ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKN 273

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            I +ID KG EV  E VDWN  E PN +FRQDPGKINAMASTKI FY++N  YMHDTP+ 
Sbjct: 274 AIRLIDGKGNEVAPETVDWNG-EAPNLMFRQDPGKINAMASTKINFYNKNGEYMHDTPQQ 332

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LFN ++RFE+SGCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+
Sbjct: 333 GLFNKLMRFESSGCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVY 392

Query: 390 FVYISAW 396
           FVYISAW
Sbjct: 393 FVYISAW 399


>gi|254469893|ref|ZP_05083298.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
 gi|211961728|gb|EEA96923.1| twin-arginine translocation pathway signal [Pseudovibrio sp. JE062]
          Length = 448

 Score =  412 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 166/380 (43%), Positives = 244/380 (64%), Gaps = 4/380 (1%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-L 102
             +   D FD  ++ ++  ID   PIISK+T      AI  Y+ I   GGWPE+  +  L
Sbjct: 63  QGTEWEDTFDEGVSSLEQ-IDFVAPIISKQTTQYMIDAILDYERIALNGGWPEVSTKKVL 121

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G  + ++  LR+RLI+SGD+    G+S  FD+YV+SAV+ FQ+RHGL P G+V  +T+
Sbjct: 122 RIGMRAPAIASLRQRLIVSGDMAQHAGVSEVFDSYVDSAVRRFQLRHGLTPDGVVGRATV 181

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            AMNVPV++R++QL+ NL R+  L    +   YV VNIPAA +E VENG+V  R T +VG
Sbjct: 182 IAMNVPVEVRLQQLRTNLERVSAL-ADNVSDTYVNVNIPAARIEVVENGRVRSRHTAVVG 240

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           + DRQ+PIL S I  + FNPYW +P SII+KD++  +++DPQYL  NNIH+ D  GKE  
Sbjct: 241 KQDRQSPILSSAIYEVNFNPYWTVPVSIIRKDLIPKMQKDPQYLAKNNIHIFDWYGKEKQ 300

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +E+DWN+ E   + F Q+PG+ N+M S +I F + +  Y+HDTPE  LF    RF +SG
Sbjct: 301 WQEIDWNTDEATKYRFTQEPGEGNSMGSIRINFNNTHQVYLHDTPEQSLFGEGYRFHSSG 360

Query: 343 CVRVRNIIDLDVWLL-KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           CVRV+N+ +L  WLL   TP W+R  ++  + + +   VK+ + +P+H  Y++AW+  D 
Sbjct: 361 CVRVQNVRELVTWLLGSTTPEWTRSRVDATINSGERLDVKMKSRIPLHLSYVTAWALSDG 420

Query: 402 IIQFRDDIYGLDNVHVGIIP 421
           ++ FRDDIY  D ++   + 
Sbjct: 421 MVHFRDDIYDKDGLYSASVD 440


>gi|218515859|ref|ZP_03512699.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli 8C-3]
          Length = 372

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 193/357 (54%), Positives = 257/357 (71%), Gaps = 4/357 (1%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRER 117
              + S+ PI+  +++A  ++AI  YQ I + GGWPE+      L LG S  +VQ LR+R
Sbjct: 1   ASAVVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALRQR 60

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L I+GDL    G+S AFD+YV+ AVK FQ RHGL   G++   TL+AMN+P D+R++QL 
Sbjct: 61  LAITGDLPREAGMSSAFDSYVDGAVKRFQARHGLPSDGVLGEFTLKAMNIPADVRLQQLN 120

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            NL+R++    + +G R+V+VNIPAA +EAVE+G V  R T +VGR+ R T +++S+I  
Sbjct: 121 TNLVRLQTFP-EDLGRRHVMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIYE 179

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           ++ NPYW  PRSI++KD+M L+R+DP YL+ N I +ID KG EV  E VDWN  E PN  
Sbjct: 180 VILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNG-EAPNLQ 238

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           FRQDPGKINAMASTKI FY++N  YMHDTP+  LFN ++RFE+SGCVRV+N+ DL  WLL
Sbjct: 239 FRQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLL 298

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++TP WSR  +E+V+ T   TP+KLATEVPV+FVYISAW   D I+QFRDDIY +D 
Sbjct: 299 RETPGWSRQQMEQVIATGVNTPIKLATEVPVYFVYISAWGMPDGIVQFRDDIYQMDG 355


>gi|323136642|ref|ZP_08071723.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397959|gb|EFY00480.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 435

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 160/402 (39%), Positives = 255/402 (63%), Gaps = 9/402 (2%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
               L +GLSL       +  D        +    R+D   AR+ +   S  PI+S +T+
Sbjct: 5   AIFQLSLGLSLAAGAPAFAGSDY----DGQAEWAQRYDAD-ARLTVS-RSTTPILSTQTV 58

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A TE AI  +++I++ GGWP++P    L LG SS +V  LR+RLI+SGD+    G S  F
Sbjct: 59  AATEAAIEQFREIVANGGWPQVPAGHQLRLGVSSPAVSTLRKRLIVSGDIGHETGTSPIF 118

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+YVE+AV+ FQ RHG+  +G+V+  T  A+NVP + R+RQL+ NL+R++    + +G R
Sbjct: 119 DSYVEAAVRRFQARHGIIETGVVNQQTFAALNVPAETRLRQLETNLVRLRSF-SRDLGNR 177

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YV  NIPAA++E VENG+V       VG++DRQ+P++ ++  ++ FNP+W +P S+I+KD
Sbjct: 178 YVTANIPAATVETVENGQVVTHHIAGVGKIDRQSPVMQTKAIQVNFNPFWTVPASVIRKD 237

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD-PGKINAMASTKI 313
           ++  ++ DP YL DN+I + +++G+E+  E+++W S +  N+ FRQD  G  N++   +I
Sbjct: 238 LIPKMQADPNYLHDNHIRVYNKEGQELQPEQINWRSLDALNYKFRQDIGGDFNSLGVVRI 297

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
           +  +    YMHDTP   +F +  RF +SGC+R++N+ D   +LL++TP W R HI++V+ 
Sbjct: 298 DIANPYGVYMHDTPAKGVFGDDFRFVSSGCIRLQNVRDYVAFLLRETPGWDRDHIDQVIA 357

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           + +   VK+   VPV++VY++AW   D + QFRDDIY  D +
Sbjct: 358 SGERVDVKITPPVPVYWVYVTAWGAPDGVTQFRDDIYQRDGL 399


>gi|304393662|ref|ZP_07375590.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294669|gb|EFL89041.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 527

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 190/409 (46%), Gaps = 9/409 (2%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            L +GL L       SV D  I+ +          +   A     + + +     +   Q
Sbjct: 120 FLKLGLDLYSGFTTPSVSDPNIVIKRKKRDATQWLEGATATGVSAMLTTLRPRHPQ-YGQ 178

Query: 78  TEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             + +A Y+ +++RGGW  +     L  G +   V  +R+ L   G        +  +D 
Sbjct: 179 LRQMLAGYRSLMARGGWQPITEGITLKPGMTDARVNEMRQNLAARGYDVRGVEFADLYDE 238

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  AVK FQ RHGL   G+   ++  A++V    R+ Q+ +NL R + L  + +G  +V
Sbjct: 239 GLVDAVKHFQKRHGLASDGVAGPASFRALSVTAAQRVDQIAINLERWRWLP-RDLGKAHV 297

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           LVN     +  +   ++  +  VIVG+   Q+P+  S I+   FNP W +P SI  K+M+
Sbjct: 298 LVNQAGFEMFTMNGTEIYDKRRVIVGKPFHQSPMFSSSISYAEFNPTWTVPLSIAGKEML 357

Query: 257 ALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
             +R +P YL + N  +    G   +++    VDW++     F +R  Q+PG  NA+   
Sbjct: 358 PKIRNNPAYLVEKNYSLYSGWGNNSQKLNPYAVDWSAVSAKRFPYRIVQEPGPRNALGQV 417

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ + Y+HDTP   LF+   R  + GC+RV   +D    L +     +   +  +
Sbjct: 418 KFIFPNKFSVYLHDTPSRNLFSRTGRAFSHGCIRVDKPLDFARKLYELQGGMNPSQVTPI 477

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++++K   V    ++PVH  Y +AW  +D +  F +D+Y  D +    +
Sbjct: 478 IESKKRKRVNFKRKMPVHLAYFTAWINEDGVPLFYEDVYKRDKLVRKFL 526


>gi|114319260|ref|YP_740943.1| peptidoglycan binding domain-containing protein [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114225654|gb|ABI55453.1| Peptidoglycan-binding domain 1 protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 559

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/420 (30%), Positives = 212/420 (50%), Gaps = 19/420 (4%)

Query: 24  LSLVEKPIHASVLDEIIN---ESYHSIVNDRFDN-----FLARVDMGIDSDIPIISKETI 75
           L L E  +   +  +++    E       D             +   +    P   ++  
Sbjct: 131 LQLAEDALTGQLNPDVVAPDWELQSPPSEDLVQALSQGLAEDDIATAVRQLYP--DQDNY 188

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA- 133
            Q  +A+A +Q +  +G +P +   PL  +G+    V+ LRE+L + GDL+    LS   
Sbjct: 189 HQMRRALARFQALAEQGDYPRMEAGPLLRVGDRDPRVETLREQLRLLGDLEDDAPLSETL 248

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   +E+AV+ FQ RHGL   G+V   T+ A+N P   R  QL+VNL R++ +  + +G 
Sbjct: 249 YGEALEAAVRDFQRRHGLQVDGVVGPRTVAALNTPPADRAEQLRVNLERLRWMP-RDLGD 307

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           RY+LVNI   S+     G+  +R  V+VGR  R+TP+    +  ++ NP W +P  +  +
Sbjct: 308 RYILVNIAGFSMTVHAEGETVMRQRVVVGRDYRRTPVFTGNMTYLVLNPSWEVPHRLATR 367

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFRQDPGKINAM 308
           D++ L+++DP+YL+     ++   G   +E+  E +DW+        +  RQ PG  NAM
Sbjct: 368 DVLPLIQRDPEYLERMGFRVLQGWGADEREIDPESLDWDRYSHRYFPYRLRQLPGPQNAM 427

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +R+N Y+HDTP   LF    R  +SGC+RV   ++L  WLL+D   WS   I
Sbjct: 428 GRVKFMFPNRHNVYLHDTPSRELFQQPRRAFSSGCIRVERPLELAAWLLRDQRQWSPEAI 487

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHP 427
           ++ ++ R+   V L   +PVH  Y +AW   +  + FRDD+Y  D  V   +  LP+  P
Sbjct: 488 DKALEERRERTVPLRRGIPVHLQYWTAWVDAEGTLHFRDDLYDRDTGVAAALAALPKPEP 547


>gi|296444378|ref|ZP_06886343.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296258025|gb|EFH05087.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 443

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/384 (42%), Positives = 248/384 (64%), Gaps = 6/384 (1%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LH 103
            +    R+D    R+ +   S  PI+S +T+A TE AI   QDI++RGGWP +P    L 
Sbjct: 36  QAEWAQRYDADP-RLTVS-RSTTPILSTQTVAATEAAIQQMQDIVARGGWPMVPAGQQLK 93

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG++S +V  LR RL+ISGD+    G S  FD+YVE+AV+ FQ RHG++ +G+V   T  
Sbjct: 94  LGSNSPAVSILRRRLMISGDIGQDAGASPIFDSYVEAAVRRFQARHGVNATGVVAQQTFV 153

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           AMNVP + R+RQL+ NL+R++    + +G RYV  NIPAAS+E VENG V       VG+
Sbjct: 154 AMNVPAEARMRQLETNLIRLRSF-SRDLGNRYVTANIPAASVETVENGYVVTHHIAGVGK 212

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
           +DRQ+P++ ++  +I FNP+W +P S+I+KD++  ++ DP YL  N+I + ++ G E+  
Sbjct: 213 IDRQSPVMQTKAIQINFNPFWTVPASVIRKDLIPKMQADPNYLTANHIRVYNKDGMELAP 272

Query: 284 EEVDWNSPEPPNFIFRQD-PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           E+++WNS +  N+ FRQD  G  N++   +I+  +    YMHDTP   +F +  RF +SG
Sbjct: 273 EQINWNSLDAMNYKFRQDIGGDFNSLGVVRIDIANPYGVYMHDTPAKGIFGDDFRFVSSG 332

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+R++N+ D   WLLK+TP W R HI+EV+++ +   V++   VPV++VY++AW+  D +
Sbjct: 333 CIRLQNVRDYVAWLLKETPGWDRDHIDEVIRSGERVDVRITPAVPVYWVYVTAWAAPDGL 392

Query: 403 IQFRDDIYGLDNV-HVGIIPLPED 425
           IQFRDDIY  D +     +  P+ 
Sbjct: 393 IQFRDDIYQRDGLGLASAVSAPQP 416


>gi|119357927|ref|YP_912571.1| peptidoglycan binding domain-containing protein [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355276|gb|ABL66147.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 563

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/424 (29%), Positives = 205/424 (48%), Gaps = 20/424 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVN---------DRFDNFLARVDMGIDSDIP 68
           L+L      +   +    +   + ES     N           F    A     I   + 
Sbjct: 137 LLLSDAFLTLAYHLRFGKV---LPESLDPDWNVNRTLAKSALEFRLQQAIAAERIAGLLD 193

Query: 69  IISKE--TIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD 125
            +S       + +K +A Y+ I+  GGW ++   + +  G+    V+++R RL  SGDL 
Sbjct: 194 ELSPRHPGYERMKKGLAHYRVIVKTGGWQKVTEGKKIKEGDRDNRVRQIRRRLQESGDLV 253

Query: 126 -PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             S   S  F   +  AV  FQ R+GL   G   + T+  MN+    RI Q+++N+ R +
Sbjct: 254 FRSADTSRVFSKAMADAVVRFQKRNGLSVDGAAGAETIREMNISAAERIEQIRINMERYR 313

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +   +  R VLVNIP  +L+ ++NG+    + VIVG+  R+TP+  + +  I+FNP W
Sbjct: 314 WFI-GDLEQRAVLVNIPGFTLQYIDNGQPRWETRVIVGKTGRETPLFKADMQYIVFNPQW 372

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDP 302
           VIP +I+ KD +  +R+   YL   N+ +ID  G+ V    V+W+     N  +R  Q  
Sbjct: 373 VIPPTILAKDALPGIRKSRSYLYSRNLKVIDRNGRVVDPATVNWSQYTAANLPYRLQQTA 432

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G   ++   K    +++  Y+HDTP   LF    R  +SGC+RV+N ++L   +L+D+  
Sbjct: 433 GDHGSLGRIKFMLPNKHIVYLHDTPHKELFQKSTRNFSSGCIRVQNPLELAELVLQDSVK 492

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W+   I   +KT KT+ V L   +PV+ +Y++A+   D  I FR D+Y  DN  +  +  
Sbjct: 493 WNSDAINAAIKTGKTSNVNLPKHIPVYLLYLTAFPQDD-AIHFRGDVYNRDNDVLKALNK 551

Query: 423 PEDH 426
               
Sbjct: 552 SLPE 555


>gi|332558206|ref|ZP_08412528.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
 gi|332275918|gb|EGJ21233.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides WS8N]
          Length = 536

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 13/409 (3%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I               F A     +DS  P       A+
Sbjct: 124 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAPRGPD--YAR 181

Query: 78  TEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 182 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 239

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R + L     G R++
Sbjct: 240 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERERWL-SIDRGERHI 298

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 299 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 358

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 359 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 417 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTEDPEGLFQSHL 476

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    + 
Sbjct: 477 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALS 525


>gi|194334694|ref|YP_002016554.1| peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312512|gb|ACF46907.1| Peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 565

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 116/387 (29%), Positives = 192/387 (49%), Gaps = 19/387 (4%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP--LHL 104
           +   +       +   ++   P+  K      +KA+A Y+D  S GGWP +P  P   H 
Sbjct: 175 LWRLQNAIEGDSIAAALEQIRPVHPK--YLSLKKALARYRDYESDGGWPSIPAGPSIRHE 232

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPSGMV 157
           G+    +  LR RL I+G+      +          +   +  AV +FQ R+GL+  G+V
Sbjct: 233 GDRDERIPVLRRRLEITGEAVSLATVDTSFADSAMVYSKELVDAVMVFQRRNGLEVDGVV 292

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              TLEA+N+    R+ Q+++NL R +  +  K+   +++VNI   +++ VENG +   S
Sbjct: 293 GPRTLEALNISASQRVEQIRINLERYRWFI-TKLEPTFIMVNIAGFTIQYVENGALTWSS 351

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVG    +TP+  + +  ++FNP W +P  I++K+ +  ++ D  YL  N + +ID  
Sbjct: 352 RVIVGEPFWKTPVFRADMRYLIFNPSWNVPPGILKKEALPSMKSDGGYLSRNGLQVIDRN 411

Query: 278 GKEVFVEEVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           G  V    +DW         +  RQ PG  NA+   K  F +R+  Y+HDTP   LF+  
Sbjct: 412 GNVVDPSSIDWAGYSAGSFPYRLRQPPGVRNALGRVKFMFPNRHFVYLHDTPGKHLFDRS 471

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  + GC+R+ N +DL   LL     WS   IE  + + KT  V L+  +PV  +Y++A
Sbjct: 472 ERAFSHGCIRLENPLDLAGVLL----GWSPEQIESALSSGKTRTVNLSRPIPVFLLYLTA 527

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +  D  + FR+D+Y  D   +  +  
Sbjct: 528 VAEGD-EVLFRNDVYNRDAAVLNALDR 553


>gi|170751743|ref|YP_001758003.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658265|gb|ACB27320.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 432

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 155/390 (39%), Positives = 238/390 (61%), Gaps = 7/390 (1%)

Query: 41  NESYHSIVNDRFDNFLARVD--MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP 98
                +     +    A           +PI+S +T+A TE+ +  Y+DI++RGGW ++ 
Sbjct: 28  ARDQGNYAQAEWAQDYASPAGMQVQRETVPILSPQTVASTEQMVERYKDIVARGGWRQVS 87

Query: 99  -IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+   +V  +R+RLI++GDLDP+ G S  +D+YV + VK FQ RHGL  +G +
Sbjct: 88  GADHLRIGSRGPAVAAIRQRLIVTGDLDPAAGSSGVYDSYVAAGVKRFQARHGLSQTGAM 147

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +T +AMNVP D+R+RQL++N++R++      +G R+V+ NIPAA +E VENG+V    
Sbjct: 148 TMATQQAMNVPADVRLRQLEINVVRLRSY-SGDLGRRFVITNIPAALVETVENGQVVTLH 206

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
              VG++DRQ+PI++++  +I FNP W +P SI++KD++  +++DP YL DN I ++   
Sbjct: 207 AAGVGKIDRQSPIMNTKATQINFNPTWTVPASIVKKDLIPKMQKDPNYLTDNKIRIL-SN 265

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           G EV  + V+W S E   + +RQD G   N+M   +I   +    +MHDT    +F +  
Sbjct: 266 GSEVSPKSVNWFSDEGTRYTYRQDSGADFNSMGIVRINIPNPYGVFMHDTNTKGVFGDDF 325

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           RF +SGCVRV+N+ +   WLLKDTP W R  +EE +++ K     +A  VPV++ YI+AW
Sbjct: 326 RFISSGCVRVQNVREYITWLLKDTPGWDRQKVEEAIESGKRIDANIAQPVPVYWTYITAW 385

Query: 397 SPKDSIIQFRDDIYGLDNVHV-GIIPLPED 425
           S  D I+QFRDDIY  D V+V   I  P  
Sbjct: 386 STPDGIVQFRDDIYKRDGVNVPSTIGAPTP 415


>gi|77463328|ref|YP_352832.1| hypothetical protein RSP_2774 [Rhodobacter sphaeroides 2.4.1]
 gi|126462184|ref|YP_001043298.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|77387746|gb|ABA78931.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126103848|gb|ABN76526.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17029]
          Length = 546

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 13/409 (3%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I               F A     +DS  P       A+
Sbjct: 134 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAPRGPD--YAR 191

Query: 78  TEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 192 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 249

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R + L     G R++
Sbjct: 250 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERERWL-SIDRGERHI 308

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 309 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 368

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 369 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 426

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 427 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHL 486

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    + 
Sbjct: 487 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALS 535


>gi|294677410|ref|YP_003578025.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
 gi|294476230|gb|ADE85618.1| peptidoglycan-binding domain 1 protein [Rhodobacter capsulatus SB
           1003]
          Length = 540

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 193/412 (46%), Gaps = 14/412 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVD--MGIDSDIPIISKETI 75
            L     +    +    +D  I+ E          +  LA       +    P   +   
Sbjct: 125 YLAWARDISSGALEPKKIDAGIVREIRRPDPQALLNGLLASPAPARFLRDLAPKSPR--Y 182

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A   KA    Q  ++ GGW PE+  + L  G+S   V  LR+RLI  G L  S  +S  +
Sbjct: 183 AALVKARLDLQAEIATGGWGPEVAAKRLGPGDSGPGVIALRDRLIRMGYLRRS--VSATY 240

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  AV+ +Q+  G+   G+    TL  +N   + R++ + V L R++ +    +G R
Sbjct: 241 DGDLHRAVQTYQLDQGIKADGVAGEGTLARINRTPEERMKSILVALERLRWMNGLDLGKR 300

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++ VN+P  +   V++GK+   +  +VG    DR+TP     +  ++ NP W +PRSI  
Sbjct: 301 HIWVNLPDFTARIVDDGKMSFETVTVVGMNQGDRRTPEFSDVMEMMVINPSWSVPRSITV 360

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ + +++++P      +I ++D +G+ V  E V++ +    NF F  RQ P   NA+  
Sbjct: 361 KEYLPMMQRNPG--AAGHIQLVDSRGRAVARESVNFAAYNARNFPFAMRQPPSNGNALGL 418

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +  N Y+HDTP   LF   VR  + GC+RV    DL   LL         + + 
Sbjct: 419 VKFLFPNPYNIYLHDTPSKSLFQKDVRAFSHGCIRVGRPFDLAYALLAAQEADPEGYFKS 478

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V+KT   T VKL   VPVH VY +A+      I++RDD+YG D      +  
Sbjct: 479 VLKTGAETTVKLRDPVPVHLVYFTAFPNAQGRIEYRDDVYGRDAALFAALDK 530


>gi|146277082|ref|YP_001167241.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555323|gb|ABP69936.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 544

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 124/410 (30%), Positives = 193/410 (47%), Gaps = 13/410 (3%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I  E            F A     ++   P       A+
Sbjct: 132 LLAWAHDLRGGVLEPGKVDPGIKREVQRLDPRSVLTAFEADPRPFLNGLAPRTP--EYAR 189

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW  ++P   L  G +   V  LR RL++ G L  S   S  +DA
Sbjct: 190 LMRARMELEARIAAGGWGLQVPAGKLRPGATGEGVLALRNRLMVMGYLGRSTVAS--YDA 247

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +E+AV+ FQ+ HGL P G+V   TL AMNV  + R+  + V L R + L     G R++
Sbjct: 248 SIEAAVRAFQIDHGLTPDGVVGEGTLAAMNVSPETRLESVLVALERERWL-AIDRGERHI 306

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   VE GKV   +  ++G+   D+++P     +  ++ NP W +PRSI  K+
Sbjct: 307 WVNLTDFSARIVEGGKVTFETRSVIGKDSPDQRSPEFSDEMEYMVINPSWHVPRSITTKE 366

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+ V    V++N+    NF    RQ P   NA+   K
Sbjct: 367 YLPLLQRNPNAAA--HLKLIDSRGQVVNRGSVNFNAYNARNFPYSMRQPPSDGNALGLVK 424

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +  N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 425 FMFPNPWNIYLHDTPSKSLFDREVRAFSHGCIRLAQPFDFAYALLARQSDDPEGLFQSHL 484

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +T K T V+L   VPVH VY +AW+     + +R DIYG D V +  +  
Sbjct: 485 RTGKETVVRLEEPVPVHLVYSTAWAGPTGRMSYRQDIYGRDGVILEALRA 534


>gi|297568521|ref|YP_003689865.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924436|gb|ADH85246.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 557

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 130/379 (34%), Positives = 195/379 (51%), Gaps = 13/379 (3%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLR 115
                 +   +P   +    +    +A Y+ +  +GGWP++P    L LG+    V  LR
Sbjct: 177 GNPQAILTGLLPQ--QAGYRELRATLADYRRLAEQGGWPQVPGSTTLRLGDRDHRVVTLR 234

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           +RL  S DL  +      FD  +E+AV+ FQ RHGL   G+V   TL A+NVP+++RIRQ
Sbjct: 235 QRLHRSRDLSGTAARGDVFDETLEAAVRSFQQRHGLLADGVVGRQTLAALNVPLEVRIRQ 294

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L++NL R + L  ++ G R++LVN  A  LE +E+ +  L   V+ G   R+TP    R+
Sbjct: 295 LKLNLERWRWL-AEEFGRRHILVNTAANKLELIEDEQAILSMRVVTGTPYRRTPNFSDRV 353

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPE 292
             ++ NPYW IP SI  +D++  L+++P YL  N I ++D        V  + VDW    
Sbjct: 354 TYLVLNPYWNIPASIAAQDILPELQENPDYLAQNGIKVLDGWNADSATVTPDTVDWERLR 413

Query: 293 ----PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +  RQDPG  N +   K  F +  + Y+HDTP   LF+   R  +SGC+R+  
Sbjct: 414 TRPQAFPYRLRQDPGPRNPLGRIKFMFPNAYSVYLHDTPARELFHRQTRNFSSGCIRLER 473

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVV--KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            ++L   LL  TP  S   +   +  +T     V+L + VPVH VY +AW   D  +QFR
Sbjct: 474 PLELAANLLAGTPLDSVGALRRALFDETSHDRHVRLPSPVPVHLVYWTAWVAPDGSVQFR 533

Query: 407 DDIYGLDNVHVGIIPLPED 425
           DDIY  D +    +  P  
Sbjct: 534 DDIYERDGLLAQALTTPPP 552


>gi|126737821|ref|ZP_01753551.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
 gi|126721214|gb|EBA17918.1| peptidoglycan binding protein, putative [Roseobacter sp. SK209-2-6]
          Length = 537

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 192/411 (46%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIA 76
            +     L    +  + +D+ ++ +   S   +  +    A+    + + +P   +    
Sbjct: 124 FVTYAAQLQTGMLQPATIDDGMVRKRRDSDGAELLNGMQQAQPFAYLRALVPASPQ--YR 181

Query: 77  QTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              +     + ++  GGW   +P   L  G+   +V  LR RLI  G L  S   S  +D
Sbjct: 182 ALLREKQRLEQLVEAGGWGTSVPASKLEPGDQGAAVVSLRNRLIKMGFLQRSA--SATYD 239

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E AV+ FQ  HGL+  G+  + TL+ +N PV  R++ + V + R + L  ++ G R+
Sbjct: 240 RNMERAVERFQSEHGLEVDGVAGTGTLKEINRPVQDRLKSVIVAMERERWLAPER-GERH 298

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           VLVN    +   V+NG V   +  ++G+   DR++P     +  ++ NP W +PRSII K
Sbjct: 299 VLVNQTDFTARIVDNGDVTFETRSVIGKNTHDRRSPEFSDTMEHMVINPSWYVPRSIITK 358

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAST 311
           + +  LR +P  +   +I + D +G+ V     D++     NF    +Q P   NA+   
Sbjct: 359 EYLPKLRNNPNAV--GHIQITDSRGRVVNRSTADFSQFTARNFPYAMKQPPSSRNALGLV 416

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     +
Sbjct: 417 KFMFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTEDPKAFFHRI 476

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + K T V+L  +VPVH +Y +A+       +FR D+YG D      +  
Sbjct: 477 LSSGKETKVELEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRDAKVWAALER 527


>gi|254512058|ref|ZP_05124125.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535769|gb|EEE38757.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium KLH11]
          Length = 533

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 209/412 (50%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRF-DNFLARVDMGIDSDIPIISKETI 75
           + +     L    +  + +D  ++ E      ++       +       + +P  S++ I
Sbjct: 119 VFVKYASDLQSGSVRPAQIDAGLVREVERRAADEHLRQLVSSEGAAYFRALMPQ-SRQYI 177

Query: 76  AQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  ++  A  + ++++GGW   +P+  L LG++  +V +LR RL+  G L P+   S  +
Sbjct: 178 ALMKQKKA-LEALIAQGGWGETVPVTKLELGDTGANVIKLRNRLVAMGYLKPTA--SPIY 234

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  AV+ FQ+ HGL+P G+    T+  +N PV  R++ + V L R + L E++ G R
Sbjct: 235 DDELLGAVQAFQIAHGLEPDGVAGKGTITEVNRPVSDRLKAVYVALERERWLPEER-GER 293

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++LVN    S + V++G+V   +  ++G+   DR++P     +  ++ NP W +PRSII 
Sbjct: 294 HILVNQADFSAKIVDDGQVTFETRAVIGKNTHDRRSPEFSDVMEHMVINPSWYVPRSIIT 353

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  LR +P  +   +I + D +G++V    VD+N     NF F  RQ P K NA+  
Sbjct: 354 KEYLPKLRANPNAV--GHIQITDRQGRQVNRGAVDFNQFTARNFPFSMRQPPSKSNALGL 411

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP+  LF+  VR  + GC+R+    +    LL       +     
Sbjct: 412 VKFMFPNKYNIYLHDTPQKSLFSREVRAFSHGCIRLAQPFEFAYALLAKQEENPKAFFHR 471

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V+ T K T VKL  +VPVH +Y +A+      +Q+R D+Y  D      +  
Sbjct: 472 VLNTGKETTVKLDKKVPVHLIYRTAYIGPKGEVQYRRDVYDRDRKIWEALQK 523


>gi|221639179|ref|YP_002525441.1| peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           KD131]
 gi|221159960|gb|ACM00940.1| Peptidoglycan-binding domain 1 protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 518

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 13/409 (3%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           +L     L    +    +D  I               F A     +DS  P       A+
Sbjct: 106 LLAWAHDLHGGALEPGKVDPGIKRAVKRLDPRSVLTAFEANPVHFLDSLAPRGPD--YAR 163

Query: 78  TEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +A    +  ++ GGW   +P   L  G +      LR+RL+  G L  S   S  +DA
Sbjct: 164 LMRARLDLEATVAAGGWGAAVPAGKLKPGATGPGFLALRDRLMAMGYLGRSTAAS--YDA 221

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            V +AV+ FQ  HGL P G+    T+ A+NV  + R++ + V L R + L     G R++
Sbjct: 222 EVAAAVRSFQTDHGLSPDGVAGEGTIAALNVAPEARLKSILVALERERWL-SIDRGERHI 280

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   S   ++NGKV   +  ++G+   D++TP     +  ++ NP W +PRSI  K+
Sbjct: 281 WVNLADFSTRLIDNGKVTFETRSVIGKDSPDQRTPEFSDEMEYMVINPSWHVPRSITTKE 340

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + LL+++P      ++ +ID +G+EV    V++N+    NF F  RQ P   NA+   K
Sbjct: 341 YLPLLQRNPN--AAGHLKLIDSRGREVSRGAVNFNAYNARNFPFSMRQPPSDGNALGLVK 398

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP   LF+  VR  + GC+R+    D    LL           +  +
Sbjct: 399 FMFPNQWNIYLHDTPSKSLFDREVRAFSHGCIRLGRPFDFAYALLAAQTDDPEGLFQSHL 458

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            + + + V+L   VPVH VY +AW+     + +RDDIYG D V    + 
Sbjct: 459 SSGRESVVRLEKPVPVHLVYFTAWAGPTGQMNYRDDIYGRDGVIFDALS 507


>gi|307946606|ref|ZP_07661941.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770270|gb|EFO29496.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 437

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 163/394 (41%), Positives = 250/394 (63%), Gaps = 5/394 (1%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
                 S L  +   +      D F + +  +   ++S  P +S ET      AI  Y  
Sbjct: 35  SSASAESPLQALQQYNQRVEWQDDFQSTVQSL-KALESSAPTLSPETADYMGVAIDRYSR 93

Query: 88  ILS--RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           I+     G      R L +G+    V  LR+RL+ SGDL  + G+S  FD+YV++AV+ F
Sbjct: 94  IVQLGGWGGVTSGGRALRIGSKDNRVVELRQRLMASGDLQQNAGMSSVFDSYVDAAVRRF 153

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q+RHGL P G+V  ST+ A+NVP ++R+RQL+ NL+R++ +    +G RYV+VNIPAA +
Sbjct: 154 QLRHGLLPDGVVGESTIVALNVPANVRLRQLETNLVRLRSMSGF-LGDRYVMVNIPAAEI 212

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           EAVE G+V  R T +VG++DRQTPIL+S+I  + FNPYW +P SII+KD++  ++QDPQY
Sbjct: 213 EAVEYGRVRSRHTAVVGKIDRQTPILNSKIYELNFNPYWTVPVSIIRKDLIPKMKQDPQY 272

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L  N I + D KG E+  +++DWN+ E   + FRQ+PG+IN++ S +I F++++  Y+HD
Sbjct: 273 LAKNRIRIFDWKGNELAWQQIDWNTDEATKYQFRQEPGEINSLGSVRINFHNKHQVYLHD 332

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLAT 384
           TP   LF +  RF +SGCVRV+N+ ++  WLL+  TP W R  +++V++T     V+L +
Sbjct: 333 TPSKTLFGSDYRFHSSGCVRVQNVREMVTWLLQSTTPDWDRARVDQVIRTGAREDVRLKS 392

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +P++  YI+AW+  D +I FRDD+Y  D ++ G
Sbjct: 393 SIPLYLTYITAWANADGVIHFRDDVYNRDGLYNG 426


>gi|260433724|ref|ZP_05787695.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417552|gb|EEX10811.1| peptidoglycan-binding domain 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 535

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 117/410 (28%), Positives = 198/410 (48%), Gaps = 12/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            +     +    +  S +D+ ++ +      +D     LA  D      +   S +  A 
Sbjct: 122 YIRYARDVQTGVLRPSDIDDGLVRQVQKRSGSDLLSALLAGTDGAAIERLAPQSSQYRAL 181

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
            +  +A  Q+++  GGW P +P      G S   V +LR+RL+  G L P+   S  +D+
Sbjct: 182 LKHKLA-LQELMRHGGWGPTVPKGKYEPGASGAGVLKLRDRLVAMGFLKPTA--SPEYDS 238

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +E+AV+ FQ  HGL+P G+    T+  +N     R++ + V + R + L     G R+V
Sbjct: 239 AMEAAVRAFQRAHGLEPDGVAGEGTIAEINRSPTDRLKAVMVAMERERWLPA-DRGQRHV 297

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           LVN    S + V++G V   +  ++G+   DR++P     +  ++ NP W +PRSII K+
Sbjct: 298 LVNQADFSAKIVDDGNVTFETRAVIGKNTHDRRSPEFSDEMEHMVINPSWYVPRSIITKE 357

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            +  LR +P  +   ++ + D +G++V    VD+N     +F F  RQ PG+ NA+   K
Sbjct: 358 YLPKLRANPNAV--RHLEITDSRGRQVNRAAVDFNQFSARSFPFAMRQPPGQSNALGLVK 415

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++
Sbjct: 416 FMFPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLAPQEEDPKAFFHRIL 475

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            T K T V L   VPVH +Y +A+      +Q+R D+YG D      +  
Sbjct: 476 NTGKETKVDLEKPVPVHLIYRTAYIGPKGDVQYRRDVYGRDAKIWEALQK 525


>gi|159044168|ref|YP_001532962.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
 gi|157911928|gb|ABV93361.1| hypothetical protein Dshi_1619 [Dinoroseobacter shibae DFL 12]
          Length = 536

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 118/412 (28%), Positives = 187/412 (45%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     +    +  S +D+ I         +        +     I +  P       
Sbjct: 122 VFLQYAQDVQSGALSPSRIDKTIVRSLPRRDRLAQITAFSKSNASRFIKALPPQ--SNGY 179

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  KA    +  +  GGW P++    L  G S   V  LR+RLI  G L     +S  +
Sbjct: 180 ARLMKAKLEMEKTIGAGGWGPKVTAAALKPGQSGPQVVALRDRLIRMGYLKR--TVSATY 237

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++ AV+ FQ  HGL   G+    TL  +N     R++ + V L R +  +  ++G R
Sbjct: 238 DAALQVAVQRFQQDHGLAADGVAAKITLREINTEPTERLKSIIVGLERERW-MNFELGPR 296

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +++VNIP      +ENGK    + V+VG+   DR+TP     ++ ++ NP W +PRSI  
Sbjct: 297 HIMVNIPDFHARVMENGKEVFATRVVVGKNTSDRRTPEFSDEMDHMVINPTWNVPRSIAT 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  L+++P     + + ++D  G+ V   EVD+      +F F  +Q P   NA+  
Sbjct: 357 KEYLPKLQENPN--AHSYMRLVDASGRTVNRAEVDFTQFNARSFPFDIKQPPSNRNALGL 414

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +++N Y+HDTP   LF    R  + GCVRV +  D    LL           + 
Sbjct: 415 VKFMFPNKHNIYLHDTPAKSLFGRESRAYSHGCVRVADPFDFAYELLSKQERDPEGFFKT 474

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +   K T V L   VPVH VY +A++P     Q+R D+YG D      +  
Sbjct: 475 TLAKGKETWVYLDKPVPVHLVYQTAFAPAKGNTQYRRDVYGRDARLWDALAQ 526


>gi|189501015|ref|YP_001960485.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
 gi|189496456|gb|ACE05004.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeobacteroides
           BS1]
          Length = 566

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 114/382 (29%), Positives = 196/382 (51%), Gaps = 18/382 (4%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL--HLGNSSVS 110
                 +   I    P     + +  ++ +A Y+ + + GGW  +P  P    +G     
Sbjct: 185 ALAGDSLAALIAQLRPKHP--SYSSLKEGLARYRRLAADGGWGTVPEGPTIKEIGQYDAR 242

Query: 111 VQRLRERLIISGDLDPSKGLSVAF-DAY------VESAVKLFQMRHGLDPSGMVDSSTLE 163
           +  LR RL ISG+++    +  ++ D        ++ AVK FQ RHGL   G V   TL 
Sbjct: 243 IPALRGRLEISGEIEQLSKVDTSYADEAMRYSVGLQEAVKKFQNRHGLQEDGEVGPKTLR 302

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A+NVPV+ R+ Q+++NL R +  + QK+   Y+LVNI   ++   E G     S VIVG 
Sbjct: 303 ALNVPVEKRVEQIRINLERYRWFV-QKLEPTYLLVNIAGFNITYFEQGAFKWGSRVIVGE 361

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
              +TP+  +++  ++FNP W +P  I++K+ +  +R+DP YL  + + ++D  G  V  
Sbjct: 362 PFWKTPVFKAQMQYVIFNPSWNVPPGILRKEALPAIRKDPGYLSRHGLQVVDRNGNVVNP 421

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             V+W +    ++  RQ PG  NA+   K  F +++  Y+HDTP   LF+   R  + GC
Sbjct: 422 GSVNW-ASGAQSYRLRQPPGSRNALGRVKFMFPNKHLVYLHDTPGKHLFDKSSRAFSHGC 480

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +R++N +DL   LL     WS   + + V   +T  + L T++PV  +Y++A +  +  +
Sbjct: 481 IRLQNPLDLAELLL----GWSGEKVRQTVSAGRTRRINLPTKLPVFLLYLTAVAEGE-EV 535

Query: 404 QFRDDIYGLDNVHVGIIPLPED 425
           QF++D+Y  D   +  +  P  
Sbjct: 536 QFKNDVYSRDAAVLQALNSPFP 557


>gi|86138266|ref|ZP_01056840.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
 gi|85824791|gb|EAQ44992.1| peptidoglycan binding protein, putative [Roseobacter sp. MED193]
          Length = 541

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 16/410 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLAR---VDMGIDSDIPIISKETI 75
            +     +    +  S +D  +        +        R       + + +P  S +  
Sbjct: 128 FVNYAAMVQTGLLKPSSIDSGMVRERR-DHDGAAALAGMRDNQPFAYLRTLVPA-SPQYR 185

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A   + +   + + + GGW P +P   L  G++  +V  LR RLI  G ++ S   S  +
Sbjct: 186 ALMREKL-RLEQLQAAGGWGPTVPGNKLEPGDTGTNVVALRNRLIALGYMERSATAS--Y 242

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +E AV+ FQ  HGL+  G+    TL+ +N PV  R++ + + + R + L     G R
Sbjct: 243 DRDMERAVESFQADHGLEVDGVAGGGTLKEINRPVRDRLKSVIIAMERERWLTP-DRGER 301

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVN    + + ++NG V   +  ++G+   DR++P     +  ++ NP W +PRSII 
Sbjct: 302 HVLVNQTDFTAKIIDNGDVTFETRSVIGKNQSDRRSPEFSDVMEHLVINPSWHVPRSIIT 361

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  LR +P  +   +I + D +G+ V    VD++     +F F  RQ P   NA+  
Sbjct: 362 KEYLPQLRNNPNAVS--HIQITDSRGRVVNRGSVDFSQYTARSFPFAMRQPPSTRNALGL 419

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +++N Y+HDTP+  LF   VR  + GC+R+    +    LL             
Sbjct: 420 VKFIFPNKHNIYLHDTPQKSLFKREVRAFSHGCIRLAQPFEFAYALLAKQTEDPIDFFHR 479

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++K+ K T V L  +VPVH +Y +A+       +FR D+YG D      +
Sbjct: 480 ILKSGKETKVDLEQQVPVHIIYRTAYVSNKGRAEFRRDVYGRDAKVWAAL 529


>gi|118588095|ref|ZP_01545505.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
 gi|118439717|gb|EAV46348.1| hypothetical protein SIAM614_10978 [Stappia aggregata IAM 12614]
          Length = 535

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 124/410 (30%), Positives = 197/410 (48%), Gaps = 11/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE-SYHSIVNDRFDNFLARVD--MGIDSDIPIISKETI 75
            L     L    +  + +++ +N           F+N    VD    ++S  P    +  
Sbjct: 125 FLRYATHLSSGRVQPNKVNKALNLFPDRPDPQTLFENAEQAVDFGAFLESLAPQT--DNY 182

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+ ++ +A Y++  + GG+ ++P    L  G S   +  LR RL        +      +
Sbjct: 183 ARLKRRLAQYREKAAAGGFAQVPEGEVLKPGMSDPRLTVLRTRLAEEDIPGAADHTGDIY 242

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  AVKLFQ  HGL+  G++   T+  +N+P+  ++ Q+++N+ R + +     G  
Sbjct: 243 DGALVEAVKLFQEYHGLETDGVIGKDTIAQLNIPIQEKLIQMELNMERRRWMP-DDPGQF 301

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YV VN+   +L+ V +GK    + V+VG+    TP+   R+  +  NPYW +P SI  K+
Sbjct: 302 YVFVNLADQNLKVVRDGKTIHTARVVVGKPYHATPVFSDRLEYVEINPYWNVPYSIATKE 361

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTK 312
            +  L+Q+P  L   +I +   +G EV   +V WNS    NF FR  QDPG  NA+   K
Sbjct: 362 YLPKLKQNPTALNGKSIRVFQ-EGNEVAPTQVAWNSYSGGNFPFRLRQDPGADNALGRIK 420

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +R N Y+HDTP   LF    R  + GC+RV +   L   LL D+   +  H E + 
Sbjct: 421 FMFPNRFNIYIHDTPSKSLFARAERAFSHGCIRVSDPFALADVLLVDSDA-TPGHWEAIR 479

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              + T VK   E+ VH  Y++AW  KD    FR DIY  D V +  +  
Sbjct: 480 DGGERTVVKPKVEIDVHLTYLTAWMNKDGSTHFRKDIYNRDKVLLEALRT 529


>gi|188580628|ref|YP_001924073.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179344126|gb|ACB79538.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 434

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 151/365 (41%), Positives = 230/365 (63%), Gaps = 5/365 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
            S  PI+S +TIA TE  +  Y+ I+SRGGW  +     L +G+   +V  +R+RLI++G
Sbjct: 53  RSSTPILSPDTIAATEAMVEKYRAIVSRGGWQAVTGAAGLRVGSRGPAVAAVRQRLIVTG 112

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DLD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP D+R+RQL+ N++R
Sbjct: 113 DLDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPADVRLRQLETNVIR 172

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++   I FNP
Sbjct: 173 LRSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNAKAVEINFNP 231

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD 
Sbjct: 232 TWTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDS 290

Query: 303 GKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G   N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP
Sbjct: 291 GADFNSMGVVRINIPNPHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTP 350

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV-GII 420
            W R H+E+ V++ +    +L   VPV++ YI+AW+  D  +QFRDDIY  D V+V   I
Sbjct: 351 GWDRAHVEQAVESGQRIDARLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNVPSTI 410

Query: 421 PLPED 425
             P  
Sbjct: 411 EAPTP 415


>gi|254464823|ref|ZP_05078234.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
 gi|206685731|gb|EDZ46213.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium Y4I]
          Length = 542

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/408 (27%), Positives = 189/408 (46%), Gaps = 14/408 (3%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD--MGIDSDIPIISKETIAQTE 79
               L    +  S +D+ +    H++    F   +        + S +P  S +      
Sbjct: 132 YATDLQTGLLEPSRIDDGMVRKKHTVDGASFLAGIRDTQPFAYMRSLVPA-SPQYRGLMR 190

Query: 80  KAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + +   + +L+ GGW P +  + L  G    +V  LR RL+  G L  S   S  +DA +
Sbjct: 191 EKL-RLEQVLAAGGWGPAVQAKTLEPGEQGPAVIALRNRLMAMGYLPRSAARS--YDAAM 247

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             AV+ FQ  HGL+  G+  + TL  +N PV  R++ + + + R + L     G R++LV
Sbjct: 248 VQAVQSFQSDHGLETDGVAGAGTLAEVNKPVSDRLKSVIIAMERERWLSP-DRGERHILV 306

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           N    + + V+NG V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +
Sbjct: 307 NQTDFTAKIVDNGDVTFETRSVIGKNTDDRRSPEFSDEMEHMVINPSWYVPRSIITKEYL 366

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIE 314
             LR +P  +   +I + D +G+ V     D++     NF    RQ P   NA+   K  
Sbjct: 367 PKLRNNPNAV--GHIQITDRRGRVVNRSAADFSQYNARNFPYSMRQPPSSSNALGLVKFM 424

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     ++ +
Sbjct: 425 FPNKYNIYLHDTPQKSLFAREVRAFSHGCIRLAQPFEFAYALLARQTEDPKAFFHRILNS 484

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T V+L  +VPVH +Y +A        +FR D+YG D      +  
Sbjct: 485 GQETKVELEQKVPVHIIYRTAVVSSKGRAEFRRDVYGRDAKIWAALER 532


>gi|240137931|ref|YP_002962403.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
 gi|240007900|gb|ACS39126.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           AM1]
          Length = 434

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 149/365 (40%), Positives = 228/365 (62%), Gaps = 5/365 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
            S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++G
Sbjct: 53  RSSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTG 112

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DLD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R
Sbjct: 113 DLDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIR 172

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP
Sbjct: 173 LRSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNP 231

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD 
Sbjct: 232 TWTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDS 290

Query: 303 GKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G   N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP
Sbjct: 291 GADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTP 350

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV-GII 420
            W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V   I
Sbjct: 351 GWDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNVPSTI 410

Query: 421 PLPED 425
             P  
Sbjct: 411 EAPTP 415


>gi|110596970|ref|ZP_01385260.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110341657|gb|EAT60117.1| Peptidoglycan-binding domain 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 560

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 127/420 (30%), Positives = 208/420 (49%), Gaps = 18/420 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINES--------YHSIVNDRFDNFLARVDMGIDSDIPI 69
           L+L      +   +    +D +  +           + +   F    A     I   +  
Sbjct: 141 LLLSDAFLTLATHLRYGKVDPVSLDPNWNINDFHRSTAME--FRLQNAVTAERIAGVLAE 198

Query: 70  ISKE--TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP 126
           +  +     Q  K +   + +   GGWP +P    L  G +   V  LR+RL++SGD+  
Sbjct: 199 LRPQRPEYLQLRKGLIRDRALAKEGGWPVVPDLTGLKEGATDNRVLPLRKRLVVSGDMTA 258

Query: 127 -SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +   S  +D  +  AVK FQ R+G+   G+   +T  AMN+PV+ RI Q+++NL R + 
Sbjct: 259 VANDTSRIYDRRMVEAVKRFQKRNGMVADGVPGPATFRAMNLPVERRIEQIRINLERCRW 318

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            +   +   YVLVNI   SL  VE+G+    + VIVG+  R+TP+  + +  I+FNP WV
Sbjct: 319 FMN-DLEPTYVLVNIAEFSLRYVEHGRNRWGTRVIVGQPYRETPVFKADMQYIIFNPRWV 377

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPG 303
           +P +I+ KD++  +R++  YL    ++++D  G  V    V+W+     NF +R  Q  G
Sbjct: 378 VPPTILAKDVLPAIRKNSSYLSRKKLNILDRNGTVVNPASVNWSQYTGANFPYRLQQTAG 437

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
              A+   K    +R+  Y+HDTP   LF    R  +SGC+RV N  +L   +L+D+  W
Sbjct: 438 DHGALGRIKFMLPNRHTVYLHDTPTKDLFEKSSRTFSSGCIRVENPQELARLVLQDSLKW 497

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           SR  I+  + T KT  V L   +PV  +Y++A++  D  I F DD+Y  D+  +  +  P
Sbjct: 498 SRERIQAAINTGKTATVYLPKRIPVFILYLTAFAEGD-EIVFLDDVYNRDSAVLKALDKP 556


>gi|163850806|ref|YP_001638849.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|218529626|ref|YP_002420442.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254560490|ref|YP_003067585.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|163662411|gb|ABY29778.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
 gi|218521929|gb|ACK82514.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254267768|emb|CAX23615.1| putative Peptidoglycan-binding protein [Methylobacterium extorquens
           DM4]
          Length = 434

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 149/365 (40%), Positives = 228/365 (62%), Gaps = 5/365 (1%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
            S  PI+S +TIA TE     Y+ I+SRGGW  +     L +G+   +V  +R+RLI++G
Sbjct: 53  RSSTPILSPDTIAATESMAEKYRAIVSRGGWQNVSGAAGLRVGSRGPAVAAVRQRLIVTG 112

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DLD + G +  +D+YV + VK FQ RHGL  +G +  +T  AMNVP ++R+RQL+ N++R
Sbjct: 113 DLDATAGGAGVYDSYVAAGVKRFQARHGLSQTGQMSPATQAAMNVPAEVRLRQLETNVIR 172

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I FNP
Sbjct: 173 LRSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQINFNP 231

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI++KD++  +++DP YL DN I ++   G+E+    V+WNS E   + +RQD 
Sbjct: 232 TWTVPASIVRKDLIPKMQKDPNYLTDNKIRILSG-GQEISPRSVNWNSDEGTRYTYRQDS 290

Query: 303 GKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           G   N+M   +I   + +  +MHDT    +F +  RF +SGCVRV+N+ +   WLLKDTP
Sbjct: 291 GADFNSMGVVRINIPNAHGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLKDTP 350

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV-GII 420
            W R  +E+ V++ +     L   VPV++ YI+AW+  D  +QFRDDIY  D V+V   I
Sbjct: 351 GWDRTRVEQAVESGQRIDATLTQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNVPSTI 410

Query: 421 PLPED 425
             P  
Sbjct: 411 EAPTP 415


>gi|126736346|ref|ZP_01752088.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
 gi|126714167|gb|EBA11036.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           CCS2]
          Length = 536

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 182/411 (44%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     +    +  S +D  I+      S ++       +     + +  P  S     
Sbjct: 123 FLDYARDIQTGLLTPSRIDSAIHRQVPVRSRLSTMRAFAQSNPSAFMRALAP--SAPEYT 180

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +        + ++ +GGW P +P R    G+S   V  LR RLI  G L  +      +D
Sbjct: 181 RLMSEKMRMERLIGQGGWGPTVPGRKYERGDSGAGVVALRNRLIAMGYLPRTNT--QTYD 238

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +  A+  FQ  HGL   G   + TL+ +NV  + R+R + V + R + +  +  G R+
Sbjct: 239 DAIYGAITRFQQAHGLAIDGTAGAGTLDEINVQPEARLRSIIVAMERERWI-NRPRGERH 297

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQK 253
           V VNI   + +  +NG     +  +VG  DR   TP     +  ++ NP W +PRSII K
Sbjct: 298 VWVNITDFTAKIYDNGVETFSTRSVVGARDRDRVTPEFSDVMEFMVINPSWYVPRSIITK 357

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAST 311
           + +  L+ +P  +   N+ + D  G+ V     D++   P NF   FR+ P + NA+   
Sbjct: 358 EFLPQLQANPNAV--RNLVITDRNGRVVDRSTADFSQYTPTNFPYSFREPPSQGNALGLV 415

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +R N Y+HDTP   LF    R  + GCVR+ +  D    LL           +  
Sbjct: 416 KFMFPNRYNIYLHDTPSKSLFGRETRAYSHGCVRLADPFDFAYALLARQVGNPEEVFQGH 475

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++ +   V L T VPVH VY +A  P D  +QFR D+YG D      +  
Sbjct: 476 LRSGRERRVDLETPVPVHLVYRTAIVPADGKVQFRRDVYGRDGRIWNALAR 526


>gi|189347548|ref|YP_001944077.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
 gi|189341695|gb|ACD91098.1| Peptidoglycan-binding domain 1 protein [Chlorobium limicola DSM
           245]
          Length = 560

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 195/380 (51%), Gaps = 8/380 (2%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSV 109
           +      R    +D   P  S    A+ +K +A Y+ I   GGW ++P       G    
Sbjct: 177 QNALAAGRPKAALDELRPKHS--GYAELKKGLARYRVIARAGGWQKVPEGDSFREGVRDS 234

Query: 110 SVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V  LR+RL  SGDL      S   + A + +AVK FQ R+GL   G+  ++T+  +N+ 
Sbjct: 235 RVPLLRKRLQQSGDLPGGVTDSSKVYTAAMANAVKRFQKRNGLSVDGVAGTATIGEINIS 294

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R+ Q+++NL R +  +   +   YVLVNI   +L+ +ENG+    + VIVG+  R+T
Sbjct: 295 AAERVDQIRLNLERYRWFVN-DLEPTYVLVNIAGFTLQYIENGRYRWGTRVIVGQPYRET 353

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+  + +  I+FNP WVIP +I+ +D +  +R    YL    + +ID +G+ V    V+W
Sbjct: 354 PVFKADMQYIVFNPQWVIPPTILAEDALPAIRNSRSYLDRKKLRVIDSRGRVVDPASVNW 413

Query: 289 NSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +     NF +R  Q  G   A+   K    +++  Y+HDTP   LF    R  +SGC+RV
Sbjct: 414 SGYSAANFPYRLQQTAGDHGALGRIKFMMPNKHVIYLHDTPTKNLFEKSERTFSSGCIRV 473

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
            N +DL   +L+D+  W++  I+  + T KT+ V L   +PV  +Y++A +  +  IQFR
Sbjct: 474 ENPLDLAQLVLQDSVKWNKTSIDSTIGTGKTSTVNLPKRIPVFLLYLTAIAEGE-EIQFR 532

Query: 407 DDIYGLDNVHVGIIPLPEDH 426
            D+Y  D+     +  P   
Sbjct: 533 RDVYNRDDRLRKALDSPVPQ 552


>gi|120555804|ref|YP_960155.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325653|gb|ABM19968.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 560

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 123/420 (29%), Positives = 197/420 (46%), Gaps = 17/420 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD------EIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS 71
           L+L     L+   +H   ++      E         +       LA   +          
Sbjct: 122 LVLSDAFLLLASHLHHGKVNPTTIHAEWTANRQQREMQSVLSEALASGTVYTTLQDLKPR 181

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD---PS 127
                Q  +      +++S   WP +   P +  G++   +  +R RL + GDL    P 
Sbjct: 182 SAAYHQLVQRRKALGELISA-DWPAIVSGPSIRPGDTDNRIPDIRRRLALLGDLSGDSPE 240

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +D  + +A+ LFQ RHGL+P G+V   TL A+N+    RI +L  NL R + L 
Sbjct: 241 ASNHQHYDDALATAIPLFQARHGLEPDGIVGRDTLTALNLLPLERIYRLDANLERWRWLP 300

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G  YV+VNI    L  VE+G+   R  VIVGR  RQTP+   RI  ++FNP W +P
Sbjct: 301 -ESLGETYVVVNIAGFELVLVESGEQVHRQRVIVGRPYRQTPVFSDRIRYLVFNPTWTVP 359

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSP--EPPNFIFRQDP 302
           R ++ +D + ++R DP+YL+     +    G    EV   E+DW         +   Q P
Sbjct: 360 RKLMIEDQLPIIRSDPEYLERLGFKVFRGWGANQSEVDPAEIDWTELSKNNFPYQLIQQP 419

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  NA+   K  F ++ + Y+HDTP   LF+ + R  +SGC+R+    +L   LL +T  
Sbjct: 420 GPQNALGQVKFMFPNQYDIYLHDTPAQSLFSRLERTLSSGCIRLERPFELAERLLANTNG 479

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W++  IE+ + T +   V L+  VPV+  Y + W     ++QFR+D+Y  D   +  +  
Sbjct: 480 WNKKRIEQTLATAEPATVVLSEPVPVYLQYWTTWIDPAGVLQFRNDVYDRDRRLLQALRA 539


>gi|163736471|ref|ZP_02143890.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
 gi|161390341|gb|EDQ14691.1| Peptidoglycan-binding domain 1 [Phaeobacter gallaeciensis BS107]
          Length = 544

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIA 76
           ++     L    +    +D+ I+ + +             +     + S  P  ++    
Sbjct: 131 LVGYASDLQTGLLQPRQIDDGIVRKKHQPDFAAYLAGIRDQAPVAYLRSLAPQSAQ--YQ 188

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              +     + +   GGW P++  + L  G+S  +V  LR RLI  G L  S      +D
Sbjct: 189 ALLREKMRLEALQRAGGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAAR--RYD 246

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E AV+ FQ  HGL   G+    TL  +N PV  R++ + V + R + L  ++ G R+
Sbjct: 247 GALERAVQAFQSDHGLTADGVAGGGTLAEINKPVSARLKSVLVAMERERWLTPER-GTRH 305

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           VLVN    + + ++NG+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K
Sbjct: 306 VLVNQTDFTAKIIDNGEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTK 365

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + +  LR +P  +   +I + D +G++V     D++      F F  RQ P + NA+   
Sbjct: 366 EYLPKLRNNPNAV--GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLV 423

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     +
Sbjct: 424 KFMFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRI 483

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + K T V L  +VPVH +Y +A+       ++R DIYG D      +  
Sbjct: 484 LNSGKETKVVLDQKVPVHIIYRTAFVTPKGQPEYRRDIYGRDAKVWAALER 534


>gi|163793880|ref|ZP_02187854.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
 gi|159180991|gb|EDP65508.1| Peptidoglycan-binding domain 1 protein [alpha proteobacterium
           BAL199]
          Length = 515

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 123/413 (29%), Positives = 197/413 (47%), Gaps = 13/413 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID---SDIPIISKETI 75
           +L     L    +     D  + +  H +   +  + +A  D  +       P  S    
Sbjct: 103 LLRFLTDLRSGRLAPHEADPDLFQERHLVDGKQLLSQVADADDPVRAIEQAGP--SNPIY 160

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            +  + +A Y+ +   GGWP +P    L  G     V  +R RL++S  L  +      +
Sbjct: 161 HRLRRLLANYRGLAVHGGWPSVPVGDALKPGMRDPRVAAIRTRLMLSESLTLTSDDPEFY 220

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D     A++ FQ RHGL+  G+V + TL A+NVP++ RI Q+ VN+ R + + ++  G  
Sbjct: 221 DDGFGLAMRGFQRRHGLEDDGVVGTRTLAALNVPIEHRIEQIVVNMERFRWMPDE-FGDD 279

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V VN+    L+ V  G V +   V+VGR  R+TP+   RI  +  NP W +P  I  +D
Sbjct: 280 HVFVNLADFMLDYVRRGLVAMSMRVVVGRQYRETPVFSDRIRYLELNPTWTVPAKIASED 339

Query: 255 MMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           +++ +R +P YL      +          +    VDW+S     F +  RQ PG+ NA+ 
Sbjct: 340 LLSKIRANPSYLSSAGFEVFAGSRDNATLIDPASVDWSSLAKGRFPYTLRQQPGRQNALG 399

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +R + Y+HDTP   LF   VR  +SGC+R+   +DL   LL          I 
Sbjct: 400 RVKFMFPNRFDIYLHDTPARELFRRSVRTFSSGCIRLEKPLDLASRLLVAD-GQDPDRIG 458

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            V+++ KTT + L   V VH  Y++AW  +   ++FRDD+YG D +    + L
Sbjct: 459 SVLESAKTTRINLREPVAVHLTYLTAWVGEGGTVEFRDDVYGRDALLAKALGL 511


>gi|220925145|ref|YP_002500447.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949752|gb|ACL60144.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 426

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 154/365 (42%), Positives = 235/365 (64%), Gaps = 4/365 (1%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSV 111
           +   A       S+ PI+S +T+A TE+ I  Y+DI++RGGW  +     L +G  S +V
Sbjct: 38  NYDSASTMRVQRSNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGAERLRVGARSPAV 97

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             LR+RLI SGDLDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ +T++AMNVP D+
Sbjct: 98  VALRQRLITSGDLDPAAGSSPVYDSYVEAGVRRFQARHGLNQTGAMNITTVQAMNVPADV 157

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R+RQL++N +R++      +G RYV+VNIPAA +E VE   V  R    VG++DRQ+PI+
Sbjct: 158 RLRQLELNAVRLRSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAAGVGKIDRQSPIM 216

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
           +++I  + FNPYW +P SII+KD++  ++++P YL DN I + D   +E+   +V+W S 
Sbjct: 217 NAKIQEVNFNPYWTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGD-REIPPSQVNWRSD 275

Query: 292 EPPNFIFRQDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           E   + FRQDPG   N+M   +I   + +  YMHDTP   +F +  RF +SGCVRV+N+ 
Sbjct: 276 EATRYRFRQDPGVDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRFVSSGCVRVQNVR 335

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           D   W+L+ TP  +   IE ++++ +    +    +PV++ YI+AWS  D ++QFRDDIY
Sbjct: 336 DYVAWILQGTPQGNPETIEAIIQSGQRVDARPVAPIPVYWTYITAWSTPDGLVQFRDDIY 395

Query: 411 GLDNV 415
             D V
Sbjct: 396 KRDGV 400


>gi|163743284|ref|ZP_02150665.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161383472|gb|EDQ07860.1| peptidoglycan binding protein, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 544

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/411 (26%), Positives = 190/411 (46%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIA 76
           ++     L    +    +D+ I+ + +             +     + S  P  ++    
Sbjct: 131 LVGYASDLQTGLLQPRQIDDGIVRKKHQPDFAAYLAGIRDQAPVAYLRSLAPQSAQ--YQ 188

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              +     + +   GGW P++  + L  G+S  +V  LR RLI  G L  S      +D
Sbjct: 189 ALLREKMRLESLQRAGGWGPQVAAKKLESGDSGPAVIALRNRLIAMGYLPRSAAR--RYD 246

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E AV+ FQ  HGL   G+    TL  +N PV  R++ + V + R + L  ++ G R+
Sbjct: 247 GALERAVQAFQSDHGLTADGVAGGGTLAEINKPVSARLKSVLVAMERERWLTPER-GTRH 305

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           VLVN    + + ++NG+V   +  ++G+   DR++P     +  ++ NP W +PRSI+ K
Sbjct: 306 VLVNQTDFTAKIIDNGEVTFVTRSVIGKDNADRRSPEFSDEMEHMVINPSWYVPRSIVTK 365

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + +  LR +P  +   +I + D +G++V     D++      F F  RQ P + NA+   
Sbjct: 366 EYLPKLRNNPNAV--GHIEITDSRGRKVNRATADFSKYTARTFPFAMRQPPSRKNALGLV 423

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     +
Sbjct: 424 KFMFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLARQTENPKDFFHRI 483

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + K T V L  +VPVH +Y +A+       ++R DIYG D      +  
Sbjct: 484 LNSGKETKVVLDQKVPVHIIYRTAFVTPKGQPEYRRDIYGRDAKVWAALER 534


>gi|254476277|ref|ZP_05089663.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
 gi|214030520|gb|EEB71355.1| peptidoglycan-binding domain 1 [Ruegeria sp. R11]
          Length = 539

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/411 (26%), Positives = 194/411 (47%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIA 76
           ++     L    +    +DE I+ + +             +     + S  P   +    
Sbjct: 126 LVNYAADLQTGLLEPRRIDEGIVRKKHQPDFASYLTGIRDQAPVAFLRSLAPQNPQ--YQ 183

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              +     + + + GGW P +  + L  G+   +V  LR RLI  G L+ S   S+ +D
Sbjct: 184 ALLREKMRLEALQAAGGWGPTVSAKKLERGDQGGAVIALRNRLIEMGYLERSA--SLRYD 241

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E AV+ FQ  HGL+  G+  + T+  +N PV  R++ + V + R + L     G R+
Sbjct: 242 TALEGAVQKFQAAHGLEADGVAGAGTISEINKPVSARLKSVLVAMERERWLTP-DRGERH 300

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +LVN    + + ++NG+V  ++  ++G+   DR++P     +  ++ NP W +PRSII K
Sbjct: 301 ILVNQTDFTAKIIDNGEVTFQTRSVIGKDHSDRRSPEFSDVMEHMVINPSWYVPRSIITK 360

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAST 311
           + +  L+ +P  +   +I + D +G++V     D++     NF    RQ P + NA+   
Sbjct: 361 EYLPKLKANPNAV--GHIEITDSRGRKVNRSTADFSQYTARNFPYAMRQPPSRKNALGLV 418

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +   + +
Sbjct: 419 KFMFPNKYNIYLHDTPQKSLFQREVRAFSHGCIRLAQPFEFAYALLAKQTENPKQFFDRI 478

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + K T V L  +VPVH +Y +A+   +   ++R D+YG D      +  
Sbjct: 479 LSSGKETKVDLEQQVPVHLIYRTAFVTPEGRAEYRRDVYGRDAKVWAALER 529


>gi|149915292|ref|ZP_01903820.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
 gi|149811013|gb|EDM70852.1| peptidoglycan binding domain protein, putative [Roseobacter sp.
           AzwK-3b]
          Length = 536

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 110/412 (26%), Positives = 195/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L +   +    +    +D+ I     Y   ++   +   +       +  P       
Sbjct: 122 VFLRLSRDMQTGLLVPGQVDDDIKRQVPYRERLSYLTNFMQSSPSAFFRALPPQ--SNEY 179

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  K     + +  RGGW P +    +  G S  +V  LR+RL+  G LD S      +
Sbjct: 180 ARLMKEKLRLERLADRGGWGPTVSAESVKPGQSGAAVTALRDRLVAMGFLDRSAT--QLY 237

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +  AV+ FQ+ HGL P G+    TL  +NVPV  R++ L V + R + +    +G R
Sbjct: 238 DETMLHAVQRFQLAHGLTPDGVAGPGTLAEINVPVQERLKSLIVAMERERWINMA-LGER 296

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++LVN+       +++G V   + V++G+   DR++P     ++ ++ NP W +PRSI  
Sbjct: 297 HILVNLTDFHARIIDDGAVSFETRVVIGKNTGDRRSPEFSDEMDHMVINPTWHVPRSIAV 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            + +  ++++P  +   ++ + + +G++V    V++ +    NF F  +Q P + NA+  
Sbjct: 357 GEYLPKMKRNPNAVS--HLKLYNNRGQQVSRGAVNFAAYNASNFPFSIKQPPSQSNALGL 414

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF   VR  + GCVRV+   +L   LL    T  +     
Sbjct: 415 VKFMFPNKYNIYLHDTPAKDLFGREVRAYSHGCVRVQKPFELAYELLSKQETDPKRTFHS 474

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           ++ T +   V L   VPVH +Y +A++     +Q+R DIYG D      +  
Sbjct: 475 ILDTGREKRVNLEQVVPVHIIYRTAFTQAKGPVQYRRDIYGRDGRIWDALDK 526


>gi|308273623|emb|CBX30225.1| hypothetical protein N47_D30340 [uncultured Desulfobacterium sp.]
          Length = 564

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 119/430 (27%), Positives = 203/430 (47%), Gaps = 16/430 (3%)

Query: 13  CFFVYLILPMGLSLVEKPIHASVL-------DEIINESYHSIVNDRFDNFLARVDMGIDS 65
              + L+L     L    + A  +       D  I   +  +V    D            
Sbjct: 134 MVELELLLSDAFFLYASHLTAGRVNPENIRTDWTIKTKHLDLVPILLDALAKGNISYALE 193

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL 124
            +   S +   + + A   Y+     GGWP++P  P +  G+    +  L  RL ISGDL
Sbjct: 194 KVNQQSPD-YQRLKIASQSYKKFSENGGWPQIPAGPKMKKGDRGARIAILHSRLQISGDL 252

Query: 125 D-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
               K     F   +E AV  FQ RHGL   G+V  +TL  +NV    R +Q+ VN+ R+
Sbjct: 253 SKTDKKDPGVFGDILEKAVLRFQSRHGLTEDGIVGHATLYELNVSALARFKQIMVNMERL 312

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L ++  G RY+ VNI    L  V+     L+  V+VG+  RQTP+   ++  ++ NP+
Sbjct: 313 RWL-QRDFGPRYLFVNIADFKLSVVDENASILKMRVVVGKDYRQTPVFEGKMTYLVINPF 371

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIF 298
           W IP  + ++D++ L+++D + +K   I + +      +E+    V+W      N  +  
Sbjct: 372 WTIPPKLAEEDLLPLIKEDIEVIKRKKIRIYESWKENAREIDPGSVNWKMVNADNFSYKL 431

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q+PG +NA+   K  F ++ + Y+HDTP   LF+   R  +SGC+R+   ++L  +LL 
Sbjct: 432 VQEPGPLNALGRIKFIFPNKFDIYLHDTPARNLFSREKRNFSSGCIRIEKPLELATYLLH 491

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
             P W++  + +V+ + +T  V ++  + V  +Y +AW  +  I+QFR+DIY  D     
Sbjct: 492 GNPNWTKQKLLDVIDSHETQIVGISNPIAVKILYFTAWVDEQGIVQFRNDIYQRDKKLAK 551

Query: 419 IIPLPEDHPI 428
            +       I
Sbjct: 552 ALEEKPPQDI 561


>gi|194337477|ref|YP_002019271.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309954|gb|ACF44654.1| Peptidoglycan-binding domain 1 protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 549

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/425 (31%), Positives = 213/425 (50%), Gaps = 14/425 (3%)

Query: 13  CFFVYL---ILPMGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMG-IDS 65
           C+ V +   +L + + L    +    LD   N       SIV ++  + +A   +     
Sbjct: 120 CYDVLMTNSLLSLAVHLRYGRVDPETLDTHWNSRQTRNGSIVENKLHHAIASGHIADALK 179

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL 124
           ++ +   +   Q  K +  Y+ I   GGWP L   P L  G     V  LR+RL +SGD+
Sbjct: 180 ELRLQHPK-YEQLRKGLVRYRTIARAGGWPVLAEGPKLQEGARGKRVMLLRQRLRVSGDI 238

Query: 125 DP-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
              +   S  ++  V  AVK FQ R+G+   G+V ++TL  MN+PV+ RI ++++NL R 
Sbjct: 239 AVLNTDTSTVYNREVVEAVKHFQKRNGMVADGVVGATTLRVMNIPVERRIDEIRLNLERY 298

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  L + +    ++VNIP  +L+ +ENG+    + VI G+  R+TP+  + +  ++ NP 
Sbjct: 299 RWFL-RDLEPTAIMVNIPRFTLQYIENGQDKWETRVITGKPPRETPLFKADMQYVILNPR 357

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QD 301
           WVIP +I+ KD +  LR+   YL    + +ID  G  +    V+W+     NF +R  Q 
Sbjct: 358 WVIPPTILAKDALPALRKSNSYLNRKRLTIIDRNGAVIDPVSVNWSQYSGGNFPYRLQQS 417

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
            G   A+   K    +R   Y+HDTP   LF    R  +SGCVRV N +DL   +L+D+ 
Sbjct: 418 SGDHGALGRIKFLLPNRYIVYLHDTPNKELFAASKRLFSSGCVRVENPVDLATLVLQDSV 477

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            WS+  I   +K+ KT  V L   +PV+ +Y++     D  + FRDD+Y  D   +  + 
Sbjct: 478 RWSKVKILSAIKSGKTKTVLLPKRIPVYLLYLTVTPEGD-ELFFRDDVYNRDERLLKALN 536

Query: 422 LPEDH 426
            P   
Sbjct: 537 KPLPQ 541


>gi|78186201|ref|YP_374244.1| hypothetical protein Plut_0313 [Chlorobium luteolum DSM 273]
 gi|78166103|gb|ABB23201.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 546

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 133/428 (31%), Positives = 205/428 (47%), Gaps = 27/428 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLAR--------------VDMGI 63
           L+L      +   +    +D           +  F     R                  +
Sbjct: 119 LLLSDAFLTLAAHLRYGKVD-----PLRLDPHWNFPGSGVRSAIGPGMHREPGEEGPAAL 173

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG 122
             +  +   +      +A+A Y+ I + GGWP LP  P L  G  S  V  LR RL I G
Sbjct: 174 LQEFRLRHPK-YRMLRRALARYRAIAASGGWPVLPPGPALTPGMQSSRVPALRRRLAIVG 232

Query: 123 DLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           DL+ +     S  FD  +  AV+ FQ RHG+   G+    T  AMNVP  +R+  L+VNL
Sbjct: 233 DLESTLIRDSSTVFDPELSLAVRRFQERHGITVDGVPGLETRSAMNVPASVRVECLKVNL 292

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R +  L   +   YVLVNI   SL+ VE+G+    + VIVGR  R+TP+  + +  ++F
Sbjct: 293 ERYRWFLS-DLDSTYVLVNIAGFSLQYVEDGEFRWATRVIVGRPYRKTPVFKADMKAVVF 351

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR- 299
           NP WV+P +I+++D +  +R+DP +L+ N+I +ID  G+ V    VDW++     F +R 
Sbjct: 352 NPRWVVPPTILKQDALPAIRKDPGWLRANHISVIDRNGRTVDPISVDWSARSAATFPYRL 411

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q  G   A+   K    +    Y+HDTP+  LF    R  +SGC+RV N   L   +L 
Sbjct: 412 QQAAGDDGALGRLKFLLPNPYLVYLHDTPKRELFLQSARTFSSGCIRVENPRRLAQLVLA 471

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           D+  WS   I+  + T +T  + L   VPV  +Y++A +  +  + FR+D+Y  D   + 
Sbjct: 472 DSVRWSPEQIDAQIDTGRTRTISLPKPVPVLILYLAAMAEGE-RVLFRNDVYRRDTAVLQ 530

Query: 419 IIPLPEDH 426
            +  P  H
Sbjct: 531 ALQAPLPH 538


>gi|170741295|ref|YP_001769950.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195569|gb|ACA17516.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 426

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 154/377 (40%), Positives = 239/377 (63%), Gaps = 6/377 (1%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-I 99
                +     +D+          S+ PI+S +T+A TE+ I  Y+DI++RGGW  +   
Sbjct: 28  RGLAQAEWAQNYDSAATMRVQ--RSNTPILSPQTLAATEQMIERYRDIVARGGWQPVSGA 85

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G  S +V  LR+RLI+SGDLDP+ G S  +D+YVE+ V+ FQ RHGL+ +G ++ 
Sbjct: 86  DRLRVGTKSPAVVALRQRLIVSGDLDPAAGSSPIYDSYVEAGVRRFQARHGLNETGAMNL 145

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +T++AMNVP D+R+RQL++N +R++      +G RYV+VNIPAA +E VE   V  R   
Sbjct: 146 TTVQAMNVPADVRLRQLELNAVRLRSY-SGNLGARYVIVNIPAALVETVEGDHVATRHAA 204

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            VG++DRQ+PI++++I  + FNPYW +P SII+KD++  ++++P YL DN I + D + +
Sbjct: 205 GVGKIDRQSPIMNAKIQEVNFNPYWTVPASIIKKDLIPKMQKEPNYLTDNKIRIFDGE-R 263

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           E+   +V+W S E   + FRQDPG   N+M   +I   + +  YMHDTP   +F +  RF
Sbjct: 264 EIAPSQVNWRSDEATRYRFRQDPGVDLNSMGFVRINIPNPHGVYMHDTPAKGIFGDDFRF 323

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV+N+ D   W+L+ TP  +   IE ++++ +    +    +PV++ YI+AWS 
Sbjct: 324 VSSGCVRVQNVRDYVAWILQGTPQGNPETIEAIIQSGQRVDARPLAPIPVYWTYITAWST 383

Query: 399 KDSIIQFRDDIYGLDNV 415
            D ++QFRDDIY  D V
Sbjct: 384 PDGLVQFRDDIYKRDGV 400


>gi|56696802|ref|YP_167164.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
 gi|56678539|gb|AAV95205.1| peptidoglycan binding protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 537

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 113/408 (27%), Positives = 187/408 (45%), Gaps = 14/408 (3%)

Query: 22  MGLSLVEKPIHASVLDE-IINESYHSIVNDRF-DNFLARVDMGIDSDIPIISKETIAQTE 79
               L    +  S +D+ ++             +   A     +    P  S+       
Sbjct: 127 FARDLQTGLLTPSQIDDGMVRVVERRGAEAYLSELQAAEPGRYMRMLAPNTSQ--YRALL 184

Query: 80  KAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           K     +  L+ GGW P +    L  G+    V  LR RLI  G +D S   S  +D  +
Sbjct: 185 KLKLDLEQALATGGWGPTVAGGKLAPGDGGPRVVALRNRLIAMGFMDRSAVAS--YDGTL 242

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           + AV+ FQ+ HGL+  G+    TL+ +N  V  R++ + V L R + L  +  G R++LV
Sbjct: 243 QKAVQAFQLAHGLEADGVAGDGTLDEINKSVADRLKSVIVALERERWLP-RDRGERHILV 301

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           N    + + V++G+V   +  ++G+   DR++P     +  ++ NP W +PRSII K+ +
Sbjct: 302 NQTDFTAKIVDHGRVTFETRSVIGKNVSDRRSPEFSDEMEHMVINPSWYVPRSIITKEYL 361

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIE 314
             LR +P  +   ++ + D +G++V    VD++     +F F  RQ PGK NA+   K  
Sbjct: 362 PKLRANPNAV--RHLEITDSRGRQVNRGAVDFSQFSSRSFPFAMRQPPGKSNALGLVKFM 419

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F ++ N Y+HDTP+  LF   VR  + GC+R+    +    LL       +     V+ T
Sbjct: 420 FPNKYNIYLHDTPQKDLFAREVRAYSHGCIRLAQPFEFAYALLALQEADPKSFFHNVLNT 479

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T V L   VPVH +Y +A         +R D+YG D      +  
Sbjct: 480 GRETKVDLERHVPVHIIYRTAVVDDRGQAGYRRDVYGRDAKIWEALSR 527


>gi|259419164|ref|ZP_05743081.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
 gi|259345386|gb|EEW57240.1| peptidoglycan-binding domain 1 [Silicibacter sp. TrichCH4B]
          Length = 540

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 116/418 (27%), Positives = 201/418 (48%), Gaps = 20/418 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDE-------IINESYHSIVNDRFDNFL-ARVDMGIDSDIPI 69
           + L   L      +   ++D        I+ + +        +     R    +   +P 
Sbjct: 120 VALSRALVDYATDLQTGLIDAPARIDDGIVRKKHQVDAASFLEGISKDRPAAFLQKLVPA 179

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
             +       +     + +++ GGW   +P+R +  G+S  +V  LR+RL+  G L P+ 
Sbjct: 180 SPQ--YRALLREKMRLETLMNAGGWGATVPVRKMEPGDSGPNVIALRDRLVSMGYLQPTA 237

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                +D  +E AV+ FQ  HGL+  G+    TL  +N PV  RI+ + V + R + L  
Sbjct: 238 TR--TYDLSLEDAVRRFQGEHGLEVDGVAGEGTLTEINRPVTDRIKSVLVAMERERWLTP 295

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVI 246
           ++ G R++LVN+   S + V++G++   +  ++G  R DR+TP     ++ ++ NP W +
Sbjct: 296 ER-GPRHILVNLTDFSAKIVDDGEISFETRSVIGSNRSDRRTPEFSDEMDHMVINPSWYV 354

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGK 304
           PRSI+ K+ +  L+ +P     + I + D +G+ V    VD++     +F F  RQ P  
Sbjct: 355 PRSIVTKEYLPKLKNNPN--AHSYIEITDNRGRVVNRNSVDFSQFTARSFPFAMRQPPSS 412

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++ N Y+HDTP+  LF   VR  + GC+R++   D    LL       
Sbjct: 413 RNALGLVKFMFPNKYNIYLHDTPQKSLFGREVRAYSHGCIRLQKPFDFAYALLAPQTENP 472

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + +   V+ + K T V L T+VPVH +Y +A+  +D   +FR DIYG D      +  
Sbjct: 473 KDYFHRVLNSGKETKVSLETKVPVHLIYRTAFVSQDGRAEFRRDIYGRDAKIWSALER 530


>gi|99081059|ref|YP_613213.1| peptidoglycan binding domain-containing protein [Ruegeria sp.
           TM1040]
 gi|99037339|gb|ABF63951.1| Peptidoglycan-binding domain 1 [Ruegeria sp. TM1040]
          Length = 540

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 120/418 (28%), Positives = 201/418 (48%), Gaps = 20/418 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD-------EIINESYHSIVNDRFDN-FLARVDMGIDSDIPI 69
           + L   L      +   ++D        I+ E +        +     R    +   +P 
Sbjct: 120 VALSRALVDYATDLQTGLIDTPVRIDEGIVREKHKVDATRFLEGIATDRPAAFLQDLVPT 179

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
            S+       +     + +L  GGW   +P+R +  G++  SV  LR RL+  G L P+ 
Sbjct: 180 SSQ--YRALLREKMRLEALLQAGGWGATVPVRKIEPGDTGQSVLALRNRLVSMGYLAPTA 237

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             S  +D  VE AV+ FQ  HGL+  G+    TL+ +N PV  RI+ + V + R + L  
Sbjct: 238 TRS--YDLDVEDAVRRFQSEHGLEVDGVAGEGTLKELNRPVSDRIKSVLVAMERERWLTP 295

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVI 246
           ++ GLR++LVN+   S + ++ G++   +  ++G  + DR+TP     ++ ++ NP W +
Sbjct: 296 ER-GLRHILVNLTDFSAKIMDEGEISFETRSVIGSTKSDRRTPEFSDEMDHMVINPSWYV 354

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGK 304
           PRSII K+ +  L+ +P     + I + D +G+ V    VD++     +F F  RQ P  
Sbjct: 355 PRSIITKEYLPKLKNNPN--AHSYIEITDNRGRVVNRNNVDFSQFTARSFPFAMRQPPSS 412

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++ N Y+HDTP+  LF   VR  + GCVR+    +    LL       
Sbjct: 413 RNALGLVKFMFPNKYNIYLHDTPQKHLFGREVRAFSHGCVRLHQPFEFAYELLTPQTENP 472

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + +   V+ + K T V L T+VPVH +Y +A+  +D   +FR D+YG D      +  
Sbjct: 473 KDYFHRVLNSGKETKVPLETKVPVHLIYRTAFVSQDGRAEFRRDVYGRDAKIWSALER 530


>gi|77918680|ref|YP_356495.1| hypothetical protein Pcar_1075 [Pelobacter carbinolicus DSM 2380]
 gi|77544763|gb|ABA88325.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 598

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/358 (30%), Positives = 184/358 (51%), Gaps = 8/358 (2%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +    +    +A Y+ +   GGWP L   P +  G+    +  LR  L++ GDL+ S+  
Sbjct: 210 RAGYQRLAVYLAHYRQLALGGGWPVLADGPPVRPGDRDARLPALRRFLVLVGDLESSRQS 269

Query: 131 SV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           S    DA   +A+K FQ+RHGL   G++   TL  +NVPV  RI QL +NL R +   +Q
Sbjct: 270 SGWRMDAVTVAALKRFQVRHGLRADGVLGKDTLAQINVPVGRRIEQLGLNLERERW-PKQ 328

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             G RY+ V+I   +L  V+ G+  +R  V+VG   R+TP+  + +  ++F PYW +P +
Sbjct: 329 DAGDRYLQVDITDFTLTLVDGGREIMRMPVVVGTSFRRTPVFSALMTYLVFAPYWTVPPT 388

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNFI--FRQDPGK 304
           I+++D + +++ +P YL  ++  ++       + +    +DW +    +F    RQ PG 
Sbjct: 389 ILEQDKLPVIKANPDYLDSHHYEIVAWGKDPNRTIDAASIDWKTITAKSFPGMLRQKPGP 448

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N +   K  F +  + Y+HDTP   LF    R  +SGC+R+   ++L ++LL     W 
Sbjct: 449 WNPLGKVKFMFPNAYHVYLHDTPAQYLFAKQQRTFSSGCIRIARPLELAIYLLDGQKGWD 508

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              I++ +   K   V+L   +PVH +Y +AW      +QFR+D+Y  D      +  
Sbjct: 509 SERIKKEMAASKPYTVRLKNPIPVHILYRTAWVDVQGRLQFRNDVYERDQELQAALKQ 566


>gi|83647078|ref|YP_435513.1| hypothetical protein HCH_04383 [Hahella chejuensis KCTC 2396]
 gi|83635121|gb|ABC31088.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 560

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 24/421 (5%)

Query: 14  FFVYLILPMG-LSLVEKPIH----ASVLDEIINESY---HSIVNDRFDNFLARVDMGIDS 65
           F + L+L    ++L    +        +D +  E                  R+   +++
Sbjct: 123 FELELLLTDAMVALSSDRLTGRFDPRSIDSVWREERTTGELAPRLYQALAEDRLLEDMNA 182

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDL 124
            +P    E      + +   ++  ++GGWP +   P L  G S   V  LR RLI SGD+
Sbjct: 183 MVPT--PEVYKGLSQLLTDLRETEAQGGWPMVSYGPTLRPGQSDSRVIELRRRLIASGDM 240

Query: 125 DP------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           +              FD  +  AV+ FQ RHGL P  +V   TL  +N P+  RI Q++ 
Sbjct: 241 ERPVIDTSEGDDETLFDEGLVKAVRFFQERHGLKPDAIVGKETLAMLNTPISERIEQVRS 300

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL R +      +G RYV+VNI    L+ V++G+  L   V+VG+  R+TP     +  +
Sbjct: 301 NLERRRWTP-TNLGDRYVVVNIADYRLDLVDHGRTELSMRVVVGKPYRRTPAFSGLMTYL 359

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPPN 295
           + NP W +P  I ++DM+    +DP+++      +    G+E   +  E ++W   +   
Sbjct: 360 VVNPLWEVPTQIAEEDMLERFIEDPEFINKMGFRVYKGWGREEAALDPETINWEEVKGGK 419

Query: 296 FIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           F +R  Q  G +NA+   K  F +  N Y+HDTP   LF    R  +SGC+R+   ++L 
Sbjct: 420 FPYRLQQAAGPMNALGRIKFMFPNEFNVYLHDTPSRSLFYKSQRAFSSGCIRLERPLELA 479

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             L+  +   +   +++++ + + T ++L   VPVH  Y +AW     + QFR D+YG D
Sbjct: 480 AALI-GSKRKTGIELDKILASGEPTTLRLPRPVPVHLQYWTAWMDDSGVAQFRKDVYGRD 538

Query: 414 N 414
            
Sbjct: 539 A 539


>gi|145219195|ref|YP_001129904.1| peptidoglycan binding domain-containing protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205359|gb|ABP36402.1| Peptidoglycan-binding domain 1 protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 550

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 120/390 (30%), Positives = 189/390 (48%), Gaps = 8/390 (2%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR 100
                  +  +       +   +    P   K       +A+A Y+ I   GGWP +P  
Sbjct: 157 KRLAELQLQLQKALASGSILTALQKMRPEYFK--YGLEREALARYRQIEQAGGWPVVPGG 214

Query: 101 -PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPSGMVD 158
             +  G S   V  +R RL ++GD +     S    D+ + +A++ FQ RH L   G+  
Sbjct: 215 QAIRPGQSDPRVPLIRRRLSVTGDFEGRGKESSVVLDSELAAAIRNFQKRHALQADGVAG 274

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +TL AMNV    R++QL+VNL R +  + Q +   +VLVNI   SL+ V  G +   + 
Sbjct: 275 GATLAAMNVTARERVQQLRVNLERYRWFVGQ-LEPTFVLVNIAGFSLQYVHEGSLRWSTR 333

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           VIVG+  R+TP+  + +  ++FNP WV+P +I+ +D +  +RQDP YL    + +ID KG
Sbjct: 334 VIVGQPYRKTPVFKADMYSVLFNPRWVVPPTILAEDALPAIRQDPGYLSRKQLQVIDGKG 393

Query: 279 KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             V    ++WN+     F +R  Q  G   A+   K    +R+  Y+HDTP   LF    
Sbjct: 394 SPVDPSSINWNAFGAAAFPYRLQQKAGDHGALGRIKFVMPNRHIVYLHDTPTKDLFEKSS 453

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N   L   +L D+  W+   I   + T KT    L   +PV  +Y++A 
Sbjct: 454 RTFSSGCIRVENPARLAELVLDDSLKWNGGAIRSAIATGKTHSEPLPRRIPVFILYLTAV 513

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           + +D  + F +DIY  D   +  +  P   
Sbjct: 514 AERD-EVFFLEDIYDRDGAVLKALNAPTQK 542


>gi|84684826|ref|ZP_01012726.1| peptidoglycan binding protein, putative [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667161|gb|EAQ13631.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 539

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 110/412 (26%), Positives = 188/412 (45%), Gaps = 15/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           L L     +    +  + +D+ I                  A+    + +  P    E  
Sbjct: 126 LFLTYAKYIQTGILTPAAVDDGIKREVPLKDRTELLKAFSQAQPAPFLRTLPP--KSEEY 183

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  +     + + + GGW P +    L  G+   +V +LR RL+  G +D S      +
Sbjct: 184 ARLMREKLRLERVRAEGGWGPTVQAGSLRPGDQGQAVIQLRNRLVTMGYMDRSAT--QTY 241

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  ++ AV+ FQ  HGL   G+    T++A+N PV+ R+ ++ V + R +  +  + G R
Sbjct: 242 DENIQRAVQRFQTNHGLTADGVAGGDTVKAINTPVEDRLERIIVAMERERW-MNIERGDR 300

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQ 252
           YV VN+   +   V+ GKV   +  +VG+     +TP     +  ++ NP W +PRSII 
Sbjct: 301 YVWVNLTTFTARVVDGGKVTFETRSVVGQNLSTHRTPEFSDMMEHMVINPSWYVPRSIIV 360

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            + +  LR +       ++ + D +G+ V     D++     NF F  RQ PG  NA+  
Sbjct: 361 NEYLPALRANSG--AAGHLLITDARGRTVSRAT-DFSQYSARNFPFDMRQPPGPGNALGY 417

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF   VR  + GCVR++   D    +L           + 
Sbjct: 418 VKFMFPNQYNIYLHDTPSKSLFGREVRTFSHGCVRLQQPFDFAYTMLAPQEADPEGFFQS 477

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++T + T V+L   VPVH VY +A++     + +R+D+YG D      +  
Sbjct: 478 ILRTGQETKVELDEPVPVHLVYRTAFTDTRGEMNYRNDMYGRDARIWAALQA 529


>gi|163731883|ref|ZP_02139330.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
 gi|161395337|gb|EDQ19659.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
          Length = 537

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 184/411 (44%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     +    +  S +D+ I     Y    +   +   +       +  P        
Sbjct: 124 FLQYARDVQTGALVPSRVDKNIVRQVPYRDRKSYLTNFAKSSPKGFFKALPPQTG--EYN 181

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              K     + ++++GGW P +  + L  G+S  SV  LR+RL+  G L  +      +D
Sbjct: 182 ALRKQKLVLEGLIAKGGWGPTVKAKKLEPGDSGASVVALRDRLVRMGYLKRTAT--GTYD 239

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           + +  AV  FQ  HGL   G+V   TL  +N  V+ R++ + V + R +  + +  G R+
Sbjct: 240 STMTDAVMRFQADHGLAQDGVVGQGTLAEINTSVEKRLQSVIVAMERERW-VNKDRGKRH 298

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           + VN+   + + ++NGKV   +  ++G  D  RQ+P     +  ++ NP W +PRSI   
Sbjct: 299 IEVNLTDFTAKIIDNGKVTFTTRSVIGARDAKRQSPEFSDVMEFMVINPSWFVPRSIAIG 358

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMAST 311
           + +  L+Q+P  +  N++ + D  G+++    VD+         +  RQ P + NA+   
Sbjct: 359 EYLPELQQNPNAV--NHLIITDRSGRQIDRTNVDFTKYTARTFPYAMRQPPSRSNALGLV 416

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF    R  + GC+R+ +  +    LL           ++ 
Sbjct: 417 KFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRLADPFEFAYALLAKQSNDPEGLFKKT 476

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + +   T + L   VPVH +Y +A +     IQ+R D+YG D      +  
Sbjct: 477 LASGTETQLNLKKPVPVHIIYRTALANSKGQIQYRRDVYGRDGRIWNALSQ 527


>gi|126726524|ref|ZP_01742365.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
 gi|126704387|gb|EBA03479.1| peptidoglycan binding protein, putative [Rhodobacterales bacterium
           HTCC2150]
          Length = 535

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 12/410 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIIN--ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     +    +  S ++ +I          +       +     + S +P  S E  A
Sbjct: 122 FLRYAHDIQSGILTPSSVNSLIARKAPRRGDQDLLEALMKSNPSRFMKSLVPS-SPEYTA 180

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             +   +  + I S G  P +  + L  G S   V  LR R+I  G L  S   S  +D 
Sbjct: 181 LLKAKRSLERAIGSTGWGPTVRAKSLKPGQSGAEVVALRNRMIRMGYLRKSA--SQKYDT 238

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  A++LFQ  +GL P G+  + T++ +NV  + R++Q+ V + R + L    +G R+V
Sbjct: 239 NLTKAIQLFQQDNGLLPDGVSGADTIKVVNVSANTRLQQVIVAMERRRWL-NIDLGKRHV 297

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+       + NGKV   +  +VG+   DR+TP     +  ++ NP W +PRSI  K+
Sbjct: 298 FVNLADFRASIINNGKVEFSTRAVVGKNISDRRTPEFSDVMTHMIINPTWHVPRSIAVKE 357

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTK 312
            + +L+++P  +   ++ M+D  G+ V    VD+ +    +F F  +Q P   NA+   K
Sbjct: 358 YLPMLKKNPGAVS--HLRMVDASGRTVSRTNVDFTAYTTKSFPFNLKQPPSNGNALGRVK 415

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +++N Y+HDTP   LF   VR  + GC+R+ +  D    LL    +  + + +  +
Sbjct: 416 FMFPNKHNIYLHDTPAKSLFARNVRAYSHGCIRLADPFDFAYALLSKEMSNGKDYFQRTL 475

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           KT+  T   L + + VH  Y +AW P    + +R DIYG D +    +  
Sbjct: 476 KTKVETQYTLKSSLKVHIDYRTAWVPAKGRVNYRRDIYGRDALIFKALAK 525


>gi|260427999|ref|ZP_05781978.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
 gi|260422491|gb|EEX15742.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
          Length = 544

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 182/411 (44%), Gaps = 13/411 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF--DNFLARVDMGIDSDIPIISKETI 75
             L     L    +    +D  I      + ++    D         +    P       
Sbjct: 129 TFLKYAHDLNGGMLDGRRIDSGIKRPPQRLASEGLLQDLARRDPRAVLRDLAP--HSPEY 186

Query: 76  AQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+        +  ++ GGW   +    L  G +   V  LR+RL+    L PS  LS  +
Sbjct: 187 ARLMHEKLTLEHRIAHGGWGATVRSGKLEPGQTGADVVALRDRLVAMNYLAPS--LSARY 244

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGL 193
           D  + +AV  FQ  HGL   G+  SSTL A+NV  + R++ + V + R + L + + +G 
Sbjct: 245 DDAIVAAVSRFQEDHGLKVDGVAGSSTLSAINVGPEERLKSVIVAMERERWLNMPEGLGA 304

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSII 251
           R++LVN+       +++GKV   +  +VG    DR+TP    R+  ++ NP W +PRSI+
Sbjct: 305 RHILVNLVDFHARIIDDGKVSFETRSVVGHQDPDRRTPEFSDRMEFMVINPSWYVPRSIV 364

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE-VDWNSPEPPNFIFRQDPGKINAMAS 310
             + +  LR++P  +   ++ + D  G+ V         S     +  RQ PG  NA+ +
Sbjct: 365 VNEYLPQLRRNPGAVS--HLEITDSSGRRVNRGRGFAQYSAASFPYAMRQPPGPRNALGT 422

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LFN   R  + GC+R+ +  D    LL           + 
Sbjct: 423 VKFMFPNKYNIYLHDTPSKSLFNQNQRTYSHGCIRLGDPHDFAYALLARQTDDPVGFFQS 482

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            ++T   T V L   VPVH +Y +A++     + +R D+YG D      + 
Sbjct: 483 RLRTGSETRVNLDEPVPVHLIYRTAFTKAKGQVNYRPDVYGRDARIWAALA 533


>gi|294636885|ref|ZP_06715215.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
 gi|291089915|gb|EFE22476.1| cell wall degradation protein [Edwardsiella tarda ATCC 23685]
          Length = 550

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 119/407 (29%), Positives = 185/407 (45%), Gaps = 15/407 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+    +          +      +V++ +       + + I S  P   +   
Sbjct: 134 YLQYVAGVGANGESWLYGGKRYTLATPPTGLVDNWQRALHQGTLTVFIRSLAPSSPQ--Y 191

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS-KGLSVA 133
                A+A    +     WP+LP  P +  G+SS ++  LRE L  SG L  +       
Sbjct: 192 PAMRAALATL--LGESQPWPKLPSGPTIRPGDSSPALPILREILRRSGVLSANQADEGEV 249

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + +AVK FQ   GL P G++   T   +NV   LR   L +N+ R++ L       
Sbjct: 250 YTPALVAAVKRFQRDQGLTPDGVIGPRTYAWLNVTPQLRAALLALNIQRLRILPAAM--Q 307

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL    +GK  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++
Sbjct: 308 TGIMVNIPNYSLIYYRDGKDVLASRVIVGRPSRKTPLMNSELNNVVVNPPWNVPTKLVRE 367

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFI--FRQDPGKINAM 308
           D++    +DP Y   +   ++       + +    +DWNS    NF    RQ PG  N++
Sbjct: 368 DIVPKAMRDPGYFDRHGYTLLSGWSSDAQVINPYMIDWNSVSARNFPYRVRQAPGASNSL 427

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S++  Y+HDTP   LFN  +R  +SGCVRV     L   LL D   WS   +
Sbjct: 428 GRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVRVNKASTLADMLLADA-GWSDQRV 486

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              ++   T  V +   +PV   Y +AW   D   QFR DIY  D +
Sbjct: 487 AAALQAGNTQYVPIRQRIPVRLYYQTAWVDGDGAPQFRTDIYNYDQL 533


>gi|85860925|ref|YP_463127.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
 gi|85724016|gb|ABC78959.1| peptidoglycan binding protein [Syntrophus aciditrophicus SB]
          Length = 567

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 125/415 (30%), Positives = 192/415 (46%), Gaps = 14/415 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
                  L    ++   +D           N       A     ++S +  ++  +   A
Sbjct: 148 FFLYAAHLASGKVNPETVDAQWFLRKRPSPNLLRTLEQALSSAEVESILENLAPSSPAYA 207

Query: 77  QTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--- 132
              KA++ Y+DI  R  WP  +    L  G+ S  V  LRERL +       +       
Sbjct: 208 NLRKALSKYRDIERRRKWPVMMEGIRLKKGDRSEQVALLRERLDVPEVFPFWEDREDGEG 267

Query: 133 --AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              FD Y+E AVK FQ  HGL   G+  S TLEAMNV    R+RQ++VNL R++ +    
Sbjct: 268 KYLFDEYLERAVKAFQKSHGLIADGVAGSETLEAMNVTAAERVRQIKVNLERLRWIP-DD 326

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G R V++NIP   L  +E  K    S ++VG+  + TP+  SRI   + NPYW +PRSI
Sbjct: 327 PGDRAVIINIPEFRLRVLEKEKEVFNSRIVVGKYAQNTPVFGSRITHFILNPYWHVPRSI 386

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFRQDPGKI 305
             ++++ L++Q P+YL   ++ ++   G   + V    +DW +      N+  RQDPG  
Sbjct: 387 AVEEILPLIKQSPEYLNWEDMKVLSGSGAKTRIVPPWTIDWENMTAREFNYHLRQDPGPR 446

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N +   K  F +  + Y+HDTP   LF    R  + GC+RV N ++L V LL      +R
Sbjct: 447 NPLGRIKFYFPNPYDVYLHDTPYLHLFEQKKRNFSHGCIRVENPVELAVVLLGGNSIETR 506

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             +   ++T K    +L   V +   Y + W+  D  + FR DIY  D      +
Sbjct: 507 KQLLSAIETGKRKQFQLRQPVSIRVFYFTTWAEADGTVHFRKDIYNHDLPLQKAL 561


>gi|83942461|ref|ZP_00954922.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
 gi|83846554|gb|EAP84430.1| peptidoglycan binding protein, putative [Sulfitobacter sp. EE-36]
          Length = 528

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 196/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     L    +  S +D  I     Y        D   +     + +  P       
Sbjct: 114 VFLQYARDLQTGVLVPSRIDPSIVREVPYRDRQTYITDFISSDPTPFLRNLRPRT--MEY 171

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               +     + +L++GGW P +P   L  G     V  LR RL+  G L  S  +   +
Sbjct: 172 NALMREKLRMEHLLTQGGWGPAVPASSLKPGAQGTQVVALRNRLMSMGYLKRSNVM--TY 229

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++ AV+ FQ  HGL+  G+  S T+  +N  V+ R++ + V + R + L +++ G R
Sbjct: 230 DATLQEAVRSFQKDHGLNEDGVAGSGTMAEINKSVETRLQSVIVAMERERWLNKER-GAR 288

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVNIPA +   V+NG+V   +  +VG  + DR TP     +  I+ NP W +PRSI+ 
Sbjct: 289 HVLVNIPAFTASVVDNGQVTFETRSVVGANQSDRLTPEFSDVMEYIVINPTWTVPRSIVT 348

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAS 310
           K+ +  ++++P      +I +ID +G+ +    V+++      F    RQ PG+ NA+  
Sbjct: 349 KEYLPSMQRNPN--AAGHIDLIDNRGRIISRGSVNFSRYTARTFPYGMRQKPGRTNALGL 406

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +  D    LL         + + 
Sbjct: 407 VKFIFPNKYNIYLHDTPSKSLFDRDVRAFSHGCVRLADPFDFAYTLLAPQAADPVAYFKR 466

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T + T V L TEVPVH +Y +A++      Q+R DIYG D      +  
Sbjct: 467 QLATGRETFVHLDTEVPVHIIYRTAFTTPRGHTQYRADIYGRDGRIWDALSK 518


>gi|83953680|ref|ZP_00962401.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
 gi|83841625|gb|EAP80794.1| peptidoglycan binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
          Length = 528

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 196/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     L    +  S +D  I     Y        D   +     + +  P       
Sbjct: 114 VFLQYARDLQTGVLVPSRIDPSIVREVPYRDRQTYITDFISSDPTPFLRNLRPRT--MEY 171

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               +     + +L++GGW P +P   L  G     V  LR RL+  G L  S  +   +
Sbjct: 172 NALMREKLRMEHLLTQGGWGPAVPASSLKPGAQGTQVVALRNRLMSMGYLKRSNVM--TY 229

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++ AV+ FQ  HGL+  G+  S T+  +N  V+ R++ + V + R + L +++ G R
Sbjct: 230 DATLQEAVRSFQKDHGLNEDGVAGSGTMAEINKSVETRLQSVIVAMERERWLNKER-GAR 288

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVNIPA +   V+NG+V   +  +VG  + DR TP     +  I+ NP W +PRSI+ 
Sbjct: 289 HVLVNIPAFTASVVDNGQVTFETRSVVGANQSDRLTPEFSDVMEYIVINPTWTVPRSIVT 348

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAS 310
           K+ +  ++++P      +I +ID +G+ +    V+++      F    RQ PG+ NA+  
Sbjct: 349 KEYLPSMQRNPN--AAGHIDLIDNRGRIISRGSVNFSRYTARTFPYGMRQKPGQTNALGL 406

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +  D    LL         + + 
Sbjct: 407 VKFIFPNKYNIYLHDTPSKSLFDRDVRAFSHGCVRLADPFDFAYTLLAPQAADPVAYFKR 466

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T + T V L TEVPVH +Y +A++      Q+R DIYG D      +  
Sbjct: 467 QLATGRETFVHLDTEVPVHIIYRTAFTTPRGHTQYRADIYGRDGRIWDALSK 518


>gi|149203870|ref|ZP_01880839.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
 gi|149142987|gb|EDM31029.1| peptidoglycan binding protein, putative [Roseovarius sp. TM1035]
          Length = 522

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/409 (26%), Positives = 194/409 (47%), Gaps = 12/409 (2%)

Query: 18  LILPMGLSLVEKPIHASV-LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
             L     +    +  S  + +I  E          +  LA+    +  ++   S E   
Sbjct: 108 TYLRYAHDVQSGVLVPSKVIGDIKREVVRQESGALLNEILAKEPSRVMRNLAPRSNEYAR 167

Query: 77  QTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             ++ +   + +++ GGW   +    L  G+S  +V  LR RLI  G LD S      +D
Sbjct: 168 LLKQKL-RLEQLVAEGGWGAAVSAEKLRPGDSGPAVIALRNRLIAMGYLDRSAA--QTYD 224

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             ++ AV+ FQ  HGL+  G+  S+TL A+N P   R++ + V + R + L E++ G R+
Sbjct: 225 MRLQQAVQAFQGDHGLETDGIAGSTTLAAVNTPATERLKSVIVAMERERWLSEER-GQRH 283

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +LVN+   S   ++N  V   +  ++G+ D  R++P     +  ++ NP W +P SI   
Sbjct: 284 ILVNLTDFSARILDNDSVTFATRAVIGKNDQNRRSPEFSDEMEYMVINPTWHVPYSIAVN 343

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + +  ++++P      ++ + +  G+EV    V++ +    NF F  +Q P + NA+   
Sbjct: 344 EYLPQMQRNPGAAS--HLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPPSERNALGLV 401

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP+  LF+   R  + GC+R+    D    LL    +  +     V
Sbjct: 402 KFMFPNKYNIYLHDTPQKALFDLEKRDFSHGCIRLHQPFDFAYALLGRQESDPKAFFHSV 461

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           + T + T V+L   VPVH +Y +A++      Q+R D+YG D      +
Sbjct: 462 LGTGRETYVQLEQHVPVHIIYRTAFTQAQGRPQYRGDVYGRDARIWEAL 510


>gi|110679848|ref|YP_682855.1| peptidoglycan binding domain-containing protein [Roseobacter
           denitrificans OCh 114]
 gi|109455964|gb|ABG32169.1| peptidoglycan binding domain protein, putative [Roseobacter
           denitrificans OCh 114]
          Length = 537

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 14/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     +    +  S +D+ I     Y    +   +   +       +  P    E  A
Sbjct: 124 FLQYARDIQTGALVPSRVDKNIVRQVPYRDRKSYLTNFAKSSPKGFFKALPPQTG-EYNA 182

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             ++ +   + ++++GGW P +  + L  G+   SV  LR+RLI  G L  S      +D
Sbjct: 183 LMKQKLV-LEGLVAKGGWGPTVKAKKLEPGDQGASVVALRDRLIRMGYLKRSAAS--TYD 239

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A + +AV  FQ  HGL   G+V   TL  +N  V  R++ + V + R + + +++ G R+
Sbjct: 240 AAMTAAVVRFQADHGLAQDGIVGRGTLAEINTSVRKRLQAVIVAMERERWVNKER-GTRH 298

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           + VN+   + + ++ GKV   +  ++G  D  RQ+P     +  ++ NP W +PRSI   
Sbjct: 299 IEVNLTDFTAKIIDKGKVTFSTRSVIGARDAKRQSPEFSDVMEFMVINPSWFVPRSIATG 358

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMAST 311
           + +  L+QDP  +  N++ + D  G+++    VD+         +  RQ P + NA+   
Sbjct: 359 EYLPELQQDPNAV--NHLIITDRSGRQIDRANVDFTKYTERTFPYAMRQPPSRSNALGLV 416

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF    R  + GC+R+ +  +    LL           ++ 
Sbjct: 417 KFMFPNKYNIYLHDTPAKNLFGRETRAYSHGCIRLADPFEFAYALLAKQSGDPEGLFQKT 476

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + T K T + L   VPVH +Y +A +     IQ+R D+YG D      +  
Sbjct: 477 LATGKETQLNLKKPVPVHIIYRTAVADSKGRIQYRRDVYGRDGRIWEALSQ 527


>gi|78189746|ref|YP_380084.1| hypothetical protein Cag_1790 [Chlorobium chlorochromatii CaD3]
 gi|78171945|gb|ABB29041.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 563

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 19/420 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD--------EIINESYHSIVNDRFD--NFLARVDMGIDSDI 67
           ++       +   +    LD           +       ++              ++  +
Sbjct: 147 VLATRAFLTLATHLRYGKLDPVRFEPTWNFSSPPNLFHFDELLARTLQRTSPSEVLNGLL 206

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDP 126
           P          +K +A Y++I   GGW  +P   L   G+    V  LR+RL  SGD+  
Sbjct: 207 PRDP--GYDVLKKELARYREIAKNGGWSAIPAGTLLQEGSRDARVPLLRQRLAASGDISS 264

Query: 127 SKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           S        ++  V  AVK FQ +HGL   G+V ++TL A+NV  D RI QL+VNL R +
Sbjct: 265 SAVADTTTLYNPDVTKAVKRFQQQHGLWSDGVVGATTLRAINVSADERIGQLRVNLERCR 324

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            LL   +    V+VNIPA +L   E G     + VIVG+  R TP+  + +  ++ NP W
Sbjct: 325 WLL-HDISPTSVIVNIPAYTLHYFEQGDRRWSTRVIVGQPKRPTPVFRADMQLLILNPRW 383

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDP 302
           V+P +++ KD++  + +DP YL+   + ++DE G  +    + W+S       +R  Q  
Sbjct: 384 VVPSTVLAKDVLPAVIKDPAYLRKKKLRVVDENGTIIDPATIKWSSYSASTLPYRLQQKS 443

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G   A+   K    +R   Y+HDTP+  LF    R  +SGC+RV++  +L   +L+ +  
Sbjct: 444 GDDGALGRIKFLMPNRYTIYLHDTPDKALFQKTQRAFSSGCIRVQHPEELARLVLRHSNR 503

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            SR  +E  +K+  T+ ++L  ++PV+ +Y++A    ++  +FR+DIY  D   +  +  
Sbjct: 504 ESRPSLESRIKSGATSTIRLPQQIPVYLIYLTALP-CNNKAEFREDIYHRDPQILKALDA 562


>gi|254503422|ref|ZP_05115573.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439493|gb|EEE46172.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 562

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 116/411 (28%), Positives = 190/411 (46%), Gaps = 13/411 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE-SYHSIVNDRFDNF--LARVDMGIDSDIPIISKETI 75
            L     L    +  + +++ +N            +           ++   P    +  
Sbjct: 152 YLRYATHLSSGRVQPNKVNKALNLFPDRPDPTMLLEQAVEAIDFSAFLEGLAPR--SDNY 209

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VA 133
           A+ ++ +A Y++  + G +  +P    L  G S   V  LR+RLI   D+  +   S   
Sbjct: 210 ARLKRRLAQYREKAATGPFTSVPDGDVLKPGMSDTRVAALRQRLIEE-DIPGAAEHSGDV 268

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  +  AV  FQ  HGL   G++   TL  +N+P++ ++ Q+++N+ R +  +   +G 
Sbjct: 269 YDGVLVEAVTTFQDHHGLANDGVIGKETLARLNIPLEEKLVQMELNMERRRW-MRDDLGS 327

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            YV VN+    L+ V+ GK    + V+VG+    TP+    ++ +  NP+W +P SI   
Sbjct: 328 FYVFVNLADQELKVVKEGKTIHTAPVVVGKPYHATPVFSDTLDYVEINPFWNVPYSIATS 387

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
           + +  L+Q+P  L   NI +    G E+   ++ WNS    NF FR  QDPG  NA+   
Sbjct: 388 EYLPKLKQNPSALSSKNIRVFR-DGTEIAPTQIAWNSYARGNFPFRLRQDPGNSNALGRI 446

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  N Y+HDTP   LF+   R  + GC+RV +   L   LL      +  H E+V
Sbjct: 447 KFMFPNEFNIYIHDTPSKSLFSRAERAFSHGCIRVSDPFALADVLLAHKNA-NEGHWEKV 505

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             T K T VK +  + VH  Y++AW  KD    FR DIY  D   +  +  
Sbjct: 506 RDTEKRTVVKPSVPIEVHLTYLTAWMNKDGSTHFRKDIYRRDEKLLEALRT 556


>gi|255263285|ref|ZP_05342627.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
 gi|255105620|gb|EET48294.1| peptidoglycan-binding domain 1 protein [Thalassiobium sp. R2A62]
          Length = 533

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 180/411 (43%), Gaps = 13/411 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           L L     +    +  S +D  I     Y            +     + S  P       
Sbjct: 120 LFLQYARDVQTGVLVPSRVDREIKREVPYRGRAQTLAAFAQSTPAAFLRSLPPAAP--EY 177

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           ++  +     + +L++GG+       L  G S   V  LR RLI  G L+ +      +D
Sbjct: 178 SRLMREKLRLEQLLAQGGFGARVSGTLAPGTSGQQVVNLRNRLIAMGFLEGNAT--QTYD 235

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A +++AV+ FQ  HGL+  G     T+  +N   + R++ + V + R + +  +  G R+
Sbjct: 236 ANIQAAVQRFQTAHGLNADGSAGQGTVTELNKSAESRLQAVIVAMERERWI-NRPRGTRH 294

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           V VN+   +   ++N  V  ++  ++G  D  R++P     +  ++ NP W +PRSI  K
Sbjct: 295 VWVNLTDFTASIIDNDAVTFQTRSVIGANDSNRRSPEFSDVMEFMVINPSWYVPRSIATK 354

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + +  L+ +P  +   ++ + D +G+ V    V+++      F F  RQ P + NA+   
Sbjct: 355 EYLPRLQSNPNAVS--HLEITDSRGRVVNRSSVNFSQYSARTFPFNMRQPPSRGNALGLV 412

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF   VR  + GC+R+ +  D    LL           +  
Sbjct: 413 KFMFPNQYNIYLHDTPAKNLFGREVRAYSHGCIRLNDPFDFAYALLAKQTADPEGFFQAK 472

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           ++T     V L   VPVH VY +A++     + FR DIYG D      +  
Sbjct: 473 LRTAAEARVNLNQPVPVHIVYRTAFTDVRGTLNFRRDIYGRDGKIWNALSR 523


>gi|144899601|emb|CAM76465.1| protein conserved in bacteria [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 532

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 114/374 (30%), Positives = 194/374 (51%), Gaps = 10/374 (2%)

Query: 54  NFLARVDMGIDSDIPIISK-ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSV 111
             LA       + IP+        + + A+A Y+ + + GGW  +P  P +  G     +
Sbjct: 148 RELAAGRELAATLIPVQPAYAGYHRLKVALARYEKLAADGGWSVIPDGPSIKAGMEDARL 207

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +R+RLI++G+L  ++      DA +  AVK FQ RHG+DP G +   TL A+N+  + 
Sbjct: 208 PLVRKRLIVTGELATNQSQGNTLDAPLIEAVKRFQGRHGIDPDGAIGKQTLTALNISAEE 267

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R+RQ+  NL R + +  +++   ++ VN+PAA  E V  G++ +   V+VG +  QTP +
Sbjct: 268 RVRQVAANLERWRWMP-RRLDSTHIAVNLPAAHFELVREGRIDMAMRVVVGDIQHQTPTM 326

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE---VDW 288
            + +  ++ NP W +P SI  K+++  LR+DP YL +NN+ ++D    +    +   +DW
Sbjct: 327 ATTMTSVVINPTWTVPPSIATKEILPKLRKDPGYLANNNMRILDAFDGDFEKSQGLGIDW 386

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +      +  RQ PG  NA+   K    + ++ Y+HDTP+   F  + R  + GCVR+  
Sbjct: 387 SKYSKFPYRLRQKPGSDNALGQVKFNLDNGDDIYLHDTPKRQYFGRIFRALSHGCVRLER 446

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             DL   LL          ++E V    T  VKL   + V+ +Y++AWS +D  + FR+D
Sbjct: 447 PTDLAKLLLPAQ----ADKLDEWVLDDTTRTVKLDKPLTVYLMYMTAWSDEDGTVHFRED 502

Query: 409 IYGLDNVHVGIIPL 422
           +YG D+     +  
Sbjct: 503 LYGHDSRLKTALKR 516


>gi|163746379|ref|ZP_02153737.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
 gi|161380264|gb|EDQ04675.1| peptidoglycan binding domain protein, putative [Oceanibulbus
           indolifex HEL-45]
          Length = 583

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 116/412 (28%), Positives = 197/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVL-DEIINE-SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     +    +    +  +I+ E  Y        D           +  P  S E  
Sbjct: 169 VFLRYARDVQTGVLIPKRIISQIVREIPYRDRKTYLQDLPKTSPAAYFRAL-PPRSLEYN 227

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A  ++ I   + +LS+GGW P +P   L  G++   V  LR RLI  G L+ S  +   +
Sbjct: 228 ALLKEKIV-MEKLLSQGGWGPSVPAGKLEPGDTGNDVIALRNRLIAMGYLERSNAVG--Y 284

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +  AV+ FQ  HGL+  G+   +T++ +N+ V+ R++ + V L R +       G R
Sbjct: 285 DATLTDAVRQFQEAHGLNTDGVAGPATMKQINIGVEQRLQSVMVALERERWF-NTDRGKR 343

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++LVNIP  S + +++GK   ++  +VG  R DR TP     +  ++ NP W +PRSI+ 
Sbjct: 344 HILVNIPDFSAKIIDDGKTTFQTRSVVGAAREDRPTPEFSDVMEHMVVNPSWYVPRSIVT 403

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            + +  L+Q+   +   +I + D  G++V    V+++      F F  RQ P   NA+  
Sbjct: 404 GEYLPQLKQNRNAVS--HIEITDRSGRKVNRGAVNFSKYTARTFPFSMRQPPSNTNALGL 461

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF+  VR  + GCVR+    +    LL           + 
Sbjct: 462 VKFMFPNKYNIYLHDTPAKSLFDRDVRAFSHGCVRLAEPFEFAYALLAPQSADPEGDFQA 521

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V+++ + T + L  +VPVH +Y +A +      ++RDD+YG D +    +  
Sbjct: 522 VLRSGRETRIVLEEQVPVHLIYRTAVTNARGHTEYRDDVYGRDALIWNALAK 573


>gi|238920326|ref|YP_002933841.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
 gi|238869895|gb|ACR69606.1| peptidoglycan-binding domain 1 protein [Edwardsiella ictaluri
           93-146]
          Length = 544

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 185/407 (45%), Gaps = 15/407 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G++              +      +V++ +      ++ + I S  P   +   
Sbjct: 128 YLQYVAGVTANGDAWLYGNKSYTLAAPPVGLVDNWQRALRQGKLTVFIRSLAPSNPQ--Y 185

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP-SKGLSVA 133
                A+     +     WP++P  P L  G+SS +V  LRE L+ SG L    +G    
Sbjct: 186 LAMRSALERL--LADTTPWPQMPGGPTLRPGDSSPAVAPLREILLRSGALPATDEGDGNV 243

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + +AVK FQ   GL P G++   T   +NV   +R   L +N+ R++ L       
Sbjct: 244 YTPALVAAVKRFQSGQGLTPDGVIGPRTYAWLNVTPSMRASLLALNIQRLRLLPASVY-- 301

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  S+     GK  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++
Sbjct: 302 TGIMVNIPNYSMTYFREGKDVLSSRVIVGRPARKTPLMNSELNNVVVNPPWNVPTKLVRE 361

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFI--FRQDPGKINAM 308
           D++    +DP Y + +   ++       + +    +DW+S    NF    RQ PG  N++
Sbjct: 362 DIVPKAMRDPGYFERHGYTLLSGWSGDVQVINPYMLDWSSVSARNFPYRVRQAPGAGNSL 421

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S++  Y+HDTP   LFN  +R  +SGCVR+     L   LL D   WS   +
Sbjct: 422 GRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVRINKASTLADMLLADA-GWSPERV 480

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              ++   T  V +   +PV   Y + W       QFR DIY  D +
Sbjct: 481 ASALQAGNTQYVPIRQRIPVRLYYQTVWVSDGGEPQFRTDIYNYDQL 527


>gi|328544358|ref|YP_004304467.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414100|gb|ADZ71163.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 543

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 118/407 (28%), Positives = 181/407 (44%), Gaps = 11/407 (2%)

Query: 22  MGLSLVEKPIHASVLDEIINE-SYHSIVNDRFDN--FLARVDMGIDSDIPIISKETIAQT 78
               LV   +  + +++ +N   +     D  +           +D   P       A+ 
Sbjct: 136 YATHLVSGRVQPNAVNKALNIFPHVPDAGDLLEAVAEAPDFGAFLDGLSPNTP--NYARL 193

Query: 79  EKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           ++A+A Y+   + GG+  +P    L  G S   +  LR R+     L P       +D  
Sbjct: 194 KQALAAYRAKAAAGGFTPVPDGAVLKPGMSDPRLDVLRRRMEQQDYLAPGAHAGDVYDGA 253

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AVK FQ  HGL   G+V   TL  MNVP+  R+ Q+++N+ R + +    +G  YV 
Sbjct: 254 LVEAVKTFQDYHGLAVDGVVGKDTLAEMNVPIGRRLIQMELNMERRRWMP-DDLGEAYVF 312

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VN+   +L+ V +GK    + V+VG+    TP+    +  +  NPYW +P SI   + + 
Sbjct: 313 VNLADQNLKVVRDGKTVHTARVVVGKPYHATPVFSKDMTYVEVNPYWNVPPSIATNEYLP 372

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEF 315
            L  +P+ L   NI +      EV   ++ W S     F F  RQDPG  NA+   K  F
Sbjct: 373 KLISNPRALDGQNIRVFSGD-AEVSPHQIAWASYSGGPFPFKLRQDPGDGNALGRIKFMF 431

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  N Y+HDTP   LF    R  + GC+RV +   L   LL D     R  ++    + 
Sbjct: 432 PNEFNIYIHDTPSRALFERAQRSFSHGCIRVSDPFALAEVLLADQ-GLDRAALDRAKASG 490

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
               + L   +PVH  Y++AW  KD    FR DIYG D V    +  
Sbjct: 491 DRQVITLRRPIPVHLTYLTAWMNKDGSTHFRKDIYGRDEVLQKALAR 537


>gi|254487232|ref|ZP_05100437.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214044101|gb|EEB84739.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 516

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 195/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     L    +  S +D  +     Y        D   +     + +  P       
Sbjct: 102 VFLQYARDLQTGILIPSRIDSSMVREVPYRDRQAYLTDFIKSDPMPFLRNLRPRT--MEY 159

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               +     + +L+ GGW P +    L  G    +V  LR RLI  G L  + G+S  +
Sbjct: 160 NALMREKLEMEKLLATGGWGPVVSASTLKPGAQGAAVVSLRNRLIRMGYLKRTNGIS--Y 217

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +E+AV+ FQ  HGL+  G+  S T+  +N  V+ R++ + V + R + L +++ G R
Sbjct: 218 DATMEAAVREFQKDHGLNTDGVAGSGTITELNKSVETRLKSVIVAMERERWLNKER-GAR 276

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVNIPA +   ++NG+V   +  +VG  +  R TP     +  I+ NP W +PRSI+ 
Sbjct: 277 HVLVNIPAFTAAIIDNGRVTFETKSVVGATKDGRYTPEFSDTMEYIVINPTWNVPRSIVT 336

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  ++ +P      +I +ID  G+ V    V+++S     F F  RQ PG+ NA+  
Sbjct: 337 KEYLPSMKNNPN--AAGHIDLIDRSGRIVPRGAVNFSSYTEQTFPFSMRQRPGRSNALGL 394

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF   +R  + GCVR+ +  D    LL    +      + 
Sbjct: 395 VKFIFPNKYNIYLHDTPSKSLFARDMRAFSHGCVRLADPFDFAYTLLAAQTSDPVGFFKS 454

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T + T V L  E+PVH +Y +A++      Q+R DIYG D      +  
Sbjct: 455 KLATGRETFVHLDNELPVHLIYRTAFTTPRGHTQYRADIYGRDAKIWNALSK 506


>gi|269139502|ref|YP_003296203.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|267985163|gb|ACY84992.1| hypothetical protein ETAE_2157 [Edwardsiella tarda EIB202]
 gi|304559391|gb|ADM42055.1| L,D-transpeptidase YcbB [Edwardsiella tarda FL6-60]
          Length = 544

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 114/407 (28%), Positives = 184/407 (45%), Gaps = 15/407 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G++              +      +V++ +       + + I S  P   +   
Sbjct: 128 YLQYVAGVAANGDAWLYGNKSYTLAAPPAGLVDNWQRALRQGTLTVFIRSLAPSNPQ--Y 185

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD-PSKGLSVA 133
                A+     +     WP++P  P L  G+SS ++  LR  L+ SG L     G    
Sbjct: 186 PAMRTALETL--LADTQPWPQMPSGPTLRSGDSSPAIATLRAILLRSGALSTAEAGDGDV 243

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + +AVK FQ   GL P G++   T   +NV   +R   L +N+ R++ L       
Sbjct: 244 YTPALVAAVKRFQSGQGLTPDGVIGPRTYAWLNVTPSMRAALLALNIQRLRLLPASV--H 301

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  S+    +GK  L S VIVGR  R+TP+++S +N ++ NP W +P  ++++
Sbjct: 302 TGIMVNIPNYSMTYYRDGKDVLSSRVIVGRPARKTPLMNSELNNVVVNPPWNVPTKLVRE 361

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFI--FRQDPGKINAM 308
           D++    +DP Y + +   ++       + +    +DWNS    NF    RQ PG  N++
Sbjct: 362 DIVPKAMRDPGYFERHGYTLLSGWSGDVQVINPYMIDWNSVSARNFPYRVRQAPGASNSL 421

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S++  Y+HDTP   LFN  +R  +SGCVR+     L   LL D   WS   +
Sbjct: 422 GRFKFNMPSQDAIYLHDTPNHALFNQDIRALSSGCVRINKASTLADMLLADA-GWSPERV 480

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              ++   T  V +   +PV   Y +AW       QFR DIY  D +
Sbjct: 481 ASALQAGNTQYVPIRQRIPVRLYYQTAWVSDGGEPQFRTDIYNYDQL 527


>gi|85702799|ref|ZP_01033903.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
 gi|85671727|gb|EAQ26584.1| peptidoglycan binding protein, putative [Roseovarius sp. 217]
          Length = 541

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 111/412 (26%), Positives = 193/412 (46%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
             L     +    +  S +D  I     Y           L      + S  P  S E  
Sbjct: 127 TYLQYARDVQSGVLIPSRVDSDIKRDIVYRDASTLMSQIVLGDAFKVMRS-FPPHSNE-Y 184

Query: 76  AQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  K     + +++ GGW   +P   L  G++  SV  LR RLI  G +  S   S  +
Sbjct: 185 ARLLKEKLRLERLIALGGWGGAVPAETLRPGDTGQSVVALRNRLIAMGYVTRSA--SQTY 242

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++ AV+ FQ  HGLD  G+   +T+ A+N     R++ + V + R + L  +  G R
Sbjct: 243 DARLQQAVQAFQTDHGLDADGVAGGATMAALNTSASERLKSVIVAMERERWLT-EDRGTR 301

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++LVN+   S   ++N +V   +  ++G+ D  R++P     +  ++ NP W +P SI  
Sbjct: 302 HILVNLTDFSARILDNDQVTFATRAVIGKNDAGRRSPEFSDEMEHMVVNPTWHVPYSIAV 361

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            + +  ++++P      ++ + +  G+EV    V++ +    NF F  +Q P + NA+  
Sbjct: 362 NEYLPQMQRNPGAAS--HLKLYNRNGREVSRGAVNFGAYNARNFPFAIKQPPSERNALGL 419

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP+  LF+   R  + GC+R+    D    LL    +  + + + 
Sbjct: 420 VKFMFPNKYNIYLHDTPQKALFDLEKRDFSHGCIRLHQPFDFAYALLAKQESDPQAYFKS 479

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V+ TR+ T V+L   VPVH +Y +A++      Q+R D+YG D      +  
Sbjct: 480 VLDTRRETYVQLEQHVPVHIIYRTAFTQAQGRPQYRGDVYGRDGRIWDALQK 531


>gi|21674674|ref|NP_662739.1| hypothetical protein CT1862 [Chlorobium tepidum TLS]
 gi|21647879|gb|AAM73081.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 571

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 123/368 (33%), Positives = 182/368 (49%), Gaps = 19/368 (5%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSK 128
                    K +  Y+ I   GGW  +   P    +G     +  +R+RLI+SGDL   K
Sbjct: 193 PSPEYVLLRKNLLRYRKIAENGGWQPVYQGPNIEKVGQVDKRMPLIRQRLILSGDLAADK 252

Query: 129 ---------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
                               +   +  AV  FQ  HGL   G++   TL AMN P +LR 
Sbjct: 253 LVAPADSSLSSAAPVPSDQVYTQELFDAVLAFQQSHGLSADGIIGLETLNAMNYPAELRA 312

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            Q++VNL R +      +G  YV+VNIPA SL+ V++ +V  +S VIVG+ D QTPI  +
Sbjct: 313 DQIRVNLERERWYG-GILGGTYVMVNIPAFSLKYVKDNEVRWKSRVIVGKPDTQTPIFAA 371

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +I  + FNP+WVIP  I+ K+ +  +R+D  YL  + + ++D  GK V    V+W S   
Sbjct: 372 QIQSVTFNPHWVIPPGILSKEAIPAIRKDIGYLAKHQLTVVDSNGKPVDPSRVNWYSDGG 431

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +   Q  G   ++   K    +R   YMHDTP   LF   +R  + GCVRV    +L 
Sbjct: 432 FPYRLVQASGDDGSLGRIKFNMPNRFMVYMHDTPTKPLFERSMRAYSHGCVRVDRPYELA 491

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             L++D+  WS   IE  + T KT  + L  +VPV+F Y +A++  +  I FR+DIY  D
Sbjct: 492 EQLMRDSKNWSLSKIEAAINTGKTRTIPLTVKVPVYFFYQTAFADGN-KIGFRNDIYDRD 550

Query: 414 NVHVGIIP 421
              +  + 
Sbjct: 551 KKLLDALN 558


>gi|311695538|gb|ADP98411.1| peptidoglycan-binding domain 1 protein [marine bacterium HP15]
          Length = 550

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/420 (30%), Positives = 194/420 (46%), Gaps = 19/420 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD------EIINESYHSIVNDRFDNFL--ARVDMGIDSDIPI 69
           L+      ++   +    ++      E         +     + L  + +   +DS  P 
Sbjct: 111 LLFSDAFLMLSSHMLVGKVNPQTVHAEWTANRRQRQMESVLKDALQRSDITGTLDSLRPA 170

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK- 128
                  +   A      +L +   P      +  G+    +  +R RL + G+L  S  
Sbjct: 171 DPA--YRKLMAARQDLTRLLGQPWLPLALSPTIRPGDRDERLNEVRRRLSLLGELAESPA 228

Query: 129 --GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +DA +ESAV  FQ RHGL+  G++   TL A+NV    R+R +   L R + L
Sbjct: 229 TFSDPRDYDAELESAVMRFQARHGLEADGLIGKDTLTALNVIPVERLRHIDATLERWRWL 288

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             + +G  YVLVNI    L+ VENG   LR  VIVG+  RQTP+   RI  ++FNP W +
Sbjct: 289 P-ESLGDTYVLVNIAGFELKMVENGAEVLRKRVIVGQPFRQTPVFSDRIRYLVFNPTWTV 347

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPE--PPNFIFRQD 301
           PR+++ +D +  + +DP YL   NI +    G   + V   EVDW S       +   Q+
Sbjct: 348 PRTLMIQDQLPRILRDPNYLSRLNISVYRGWGADRERVDPLEVDWPSLNRNNFPYQLVQE 407

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  NA+   K  F ++ + Y+HDTP   LF+   R  +SGC+RV    DL   LL   P
Sbjct: 408 PGPQNALGQIKFMFPNQYDVYLHDTPGRGLFSRAERSFSSGCIRVEQPFDLAERLLASAP 467

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            WSR  I+ VV   +   V L   VPVH  Y ++W   +  +QFR+D+Y  D   +  + 
Sbjct: 468 DWSREKIDRVVSEAQPQTVVLPEPVPVHIQYWTSWVDNEGRLQFRNDLYNRDARLIDQLR 527


>gi|254462001|ref|ZP_05075417.1| peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2083]
 gi|206678590|gb|EDZ43077.1| peptidoglycan-binding domain 1 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 536

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + L     L    +  S +D  I         V+   +   +          P       
Sbjct: 122 IFLQYSRDLQTGVLTPSKVDREIVRQVPLRDRVSYLTNFTKSSPKRFFQVLAP--KAPEY 179

Query: 76  AQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  K     +  L++GGW + +P + L  G +  +V  LR RL + G L  S   S  +
Sbjct: 180 ARLMKTKLMMERQLAKGGWGQKVPQKSLKPGQTGNAVVILRNRLQVMGYLKRSS--SQTY 237

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA ++SA++ FQ+  GL+P G+    T+  +N P++  ++ + V + R +  + +  G R
Sbjct: 238 DAAMQSAMQQFQLSRGLNPDGIAGPGTMAEINRPIESHLQAIMVAMERERW-MNRPRGKR 296

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           ++ VN+   S   ++NGK   RS  ++G+   DR++P     +  ++ NP W +PRSI  
Sbjct: 297 HIWVNLTDFSATIIDNGKESFRSRSVIGKNQRDRRSPEFSDVMEFLVVNPTWNVPRSIAT 356

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ + LL+++P  +   ++ ++D +G+ V     ++       F F  +Q P   NA+  
Sbjct: 357 KEYLPLLKKNPNAV--GHLRIVDSRGRTVSRSAANFGEYSAKTFPFSIKQPPSNSNALGL 414

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +R+N Y+HDTP   LF+  VR  + GC+R+    +    LL    +  +   + 
Sbjct: 415 VKFMFPNRHNIYLHDTPAKNLFSREVRAYSHGCIRLHQPFEFAYALLAKQTSDPKGFFQS 474

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + T   T V L   VPVH VY +A+   +    +R DIYG D      +  
Sbjct: 475 KLSTGTETQVNLNAPVPVHIVYRTAFVTANGTANYRRDIYGRDAKIFAALAK 526


>gi|320355292|ref|YP_004196631.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
 gi|320123794|gb|ADW19340.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobulbus propionicus DSM
           2032]
          Length = 636

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 114/390 (29%), Positives = 196/390 (50%), Gaps = 13/390 (3%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISK--ETIAQTEKAIAFYQDILSRGGWPELPI 99
               S ++       A     I + +  +S   +     ++A+  Y+ I S+GGWP++P+
Sbjct: 205 TPRTSPIDTYL---TAIRTGAIQATLDKLSPHHKAYVNLKEALIRYKQIASKGGWPQVPM 261

Query: 100 RP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMV 157
            P L  G     V  +R RL I+     + G +   +D+++ +AVK FQ RH L+P G+V
Sbjct: 262 GPSLRPGAHDDRVPAIRRRLAITDHYHATGGGNAKQYDSHLVAAVKAFQARHHLEPDGVV 321

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             ST+ AMNV V  RI+QL+VNL R + ++   M    ++V+I    L+   +      S
Sbjct: 322 GKSTVMAMNVTVAERIKQLRVNLERTRWVI-HDMPSSNLIVDIAGFMLQYYHDNAPVWTS 380

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG+   QTPI  S I  I+ NP W I   I++ + +  + +DP YL    + ++D  
Sbjct: 381 KVMVGQPFHQTPIFRSAITYIVLNPTWTITPDIVKNETVPSIIKDPGYLAKQRLRVLDRN 440

Query: 278 GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
           G  V    + W   +     +  RQD G+ N++   K  F +  + Y+HDTP   LF   
Sbjct: 441 GNAVDPNTIPWTQYQGRYFPYTLRQDAGRDNSLGLIKFLFPNPYHVYLHDTPSKSLFGRT 500

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWS--RYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
            R  + GC+RV+N ++L   +L + P        +++++ + KTT V L   +P++ +Y+
Sbjct: 501 RRAFSHGCIRVQNPLELGRMILANDPGNPTTPAKMDQILASGKTTTVILKQPLPIYLMYL 560

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           +A    D+ + F+ D+Y  D   +  +  P
Sbjct: 561 TANVQ-DNKVMFKPDLYSRDEGILTALNTP 589


>gi|83952122|ref|ZP_00960854.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
 gi|83837128|gb|EAP76425.1| peptidoglycan binding protein, putative [Roseovarius nubinhibens
           ISM]
          Length = 523

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 108/412 (26%), Positives = 197/412 (47%), Gaps = 14/412 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
            +L +   L    +  + +D  I     Y S V    +   +       S  P       
Sbjct: 109 TMLLLARDLQTGMLVPAKVDREIVRQVPYRSRVAHLTNFSTSNPRGFFRSLPP--KNAEY 166

Query: 76  AQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           ++  +     + ++ +GG+ PE+P + L  G S  +V  +R RL+I G +  S   S  +
Sbjct: 167 SRLLREKLRLEALMLQGGFGPEVPAKSLKRGQSGPAVVAMRNRLVIMGFMPRSA--SQEY 224

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +  AV+ FQ  HGL   G   ++T+  +N  V+ R++ + V + R + +  Q  G R
Sbjct: 225 DAKLAEAVQAFQAAHGLVADGDAGAATVAEINTSVETRLKSILVAMERERWI-NQPRGDR 283

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVN+   S   V++ +V  ++  ++G    DR++P     +  +  NP W +PRSI  
Sbjct: 284 HVLVNLTDFSARIVDHDEVTFQTRAVIGLNDSDRRSPEFSDVMEYMEINPTWNVPRSITV 343

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
           K+ +  ++++P      ++ + + +G++V    V++N+     F F  +Q P   NA+  
Sbjct: 344 KEYLPQMQRNPN--AAGHLKLYNSRGQQVSRANVNFNAYTARTFPFALKQPPSNRNALGL 401

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F ++ N Y+HDTP   LF    R  + GC+R+++  D    LL       +     
Sbjct: 402 VKFMFPNKYNIYLHDTPAKSLFQRNKRDFSHGCIRLQDPFDFAYALLARQEEDPKGFFHR 461

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V+ T + T V+L  +VPVH +Y +A++     +Q+R+D+YG D      +  
Sbjct: 462 VLNTGQQTQVRLKKQVPVHIIYRTAFTQAKGPMQYRNDVYGRDARIWSALQQ 513


>gi|260575117|ref|ZP_05843118.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
 gi|259022739|gb|EEW26034.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
          Length = 531

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 185/410 (45%), Gaps = 14/410 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           +L     L    +  S +D  I      H    +            +    P        
Sbjct: 118 LLDYARDLQTGALVPSEIDPGIKREVPVHDRHANLVAFETGNPVAFLRGLAPT--ATAYP 175

Query: 77  QTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           Q  KA    +  ++ GGW   +P   L  G    +V  LR+RLI  G L  +      +D
Sbjct: 176 QLMKAKLDLEAQIASGGWGAAVPSGALKPGQDGPAVVALRDRLIRMGYLHRTATA--IYD 233

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A ++ AV+ FQ+ HGL   G+  + T+E +N+  + R + + V + R +  +    G R+
Sbjct: 234 ADMQKAVQAFQLAHGLTADGVAGTGTIEQINIGPEARWQSVVVAMERERW-MNIDRGHRH 292

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           + VN+   + + +++GKV   S  ++G+   DR++P     +  ++ NP W +PRSI  +
Sbjct: 293 IWVNLTDFTAKIIDDGKVTFTSRSVIGKNAADRRSPEFSDMMEFMVINPSWSVPRSITTR 352

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + + +++++P      ++ +ID  G+ V    VD+      NF F  RQ P   NA+   
Sbjct: 353 EYLPMMQRNPN--AAGHLKLIDRAGRVVSRASVDFTRYTAANFPFAMRQAPSSGNALGLV 410

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F +  N Y+HDTP   LF N VR  + GC+R+ +  D    LL       +   E+ 
Sbjct: 411 KFMFPNPYNIYLHDTPSKSLFANEVRDFSHGCIRLGSPFDFAYALLARQTDDPKGLFEQH 470

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +     + + LA  VPVH VY +A+      + +R D+YG D +    + 
Sbjct: 471 LNGGGESRLDLAAPVPVHLVYFTAFPGAKGQMNYRRDVYGRDALIFDALS 520


>gi|220931487|ref|YP_002508395.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
 gi|219992797|gb|ACL69400.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
          Length = 547

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 124/426 (29%), Positives = 209/426 (49%), Gaps = 25/426 (5%)

Query: 5   LKINKILYCFFVYLILPMGLSLVEKPIHASVLD------EIINESYHSIVNDRFDNFLAR 58
            ++          + L   L L+       + +      E+I +   +I  +        
Sbjct: 123 REVALSFELLMTKVYLDYTLDLLTGYTRNGMFNKMYDKHELIKKLNRAIEQE-------S 175

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRER 117
           +        P   +E   +  KA++  ++I S+  WP +   P L  G+ S  +  LR R
Sbjct: 176 LGKFFIDLYP--GQELYFRMRKALSHLRNISSK-DWPRVGYGPPLQRGDYSKRIIELRRR 232

Query: 118 LIISGDLDPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           L +SGDL   +  +  + D  +E AV+ FQ RHGL  SG+VD  T+EA+N+PV  +I ++
Sbjct: 233 LYLSGDLSEEQLNTGTYFDRELEKAVRKFQRRHGLKDSGIVDDKTIEALNIPVKEKINKI 292

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N+ R++ L         V+VNIP   L+ +   KV L S VIVG  + QTP  +  I 
Sbjct: 293 IINMERLRWLPRDN-PDLCVMVNIPEYKLKVIREDKVILESKVIVGSRENQTPSFNDSIE 351

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV---FVEEVDWNSPEP 293
            I+ NPYW IP +I + +++  +++DP YL  +NI ++     EV     ++++W+   P
Sbjct: 352 YIVLNPYWYIPDNITRYELLPQIKKDPDYLDKHNIQILSGFEGEVKIIPEDQINWDEVTP 411

Query: 294 --PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
              ++  RQ PG  N++ S K  F +  N Y+HDTP   LF    R  + GC+RV   ++
Sbjct: 412 ENFSYKLRQKPGPGNSLGSIKFLFPNDFNVYLHDTPSRGLFEYRERALSHGCIRVERPLE 471

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   +L     WS   +  ++ +     ++L   VP++ +Y++ W   D +I +R+DIY 
Sbjct: 472 LAK-VLISQSNWSYNEVISIINSGNREVIELKNPVPIYLIYLTVWVDDDGVIHYREDIYQ 530

Query: 412 LDNVHV 417
            D   V
Sbjct: 531 RDKKLV 536


>gi|254454682|ref|ZP_05068119.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
 gi|198269088|gb|EDY93358.1| hypothetical protein OA238_5313 [Octadecabacter antarcticus 238]
          Length = 535

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 113/411 (27%), Positives = 190/411 (46%), Gaps = 12/411 (2%)

Query: 18  LILPMGLSLVEKPIHA-SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L L     +    +   SV+ EI  E            FLA       + +P  S E  A
Sbjct: 121 LFLSYARDVQTGILTPRSVVSEIRREVPLRSRLGYLQGFLASTPASYLATLPPNSPE-YA 179

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +  +     + +L++GGW P +    L +G S V+V  LR+RL+  G ++ S      +D
Sbjct: 180 RLLREKMSLERLLAQGGWGPAVSSGSLAVGASGVAVVALRDRLVAMGYMERSAT--QIYD 237

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A ++ AV+ FQ  HGL   G   + TL  +NVP   R++Q+ V + R +  + +  G R+
Sbjct: 238 ATIQEAVQRFQQTHGLAEDGEAGAGTLTEINVPAASRLQQIIVAMERERW-MNRPRGERH 296

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           V VN+   S   ++N +V  ++  ++G     RQTP     +  ++ NP W +PRSI+  
Sbjct: 297 VWVNLVDFSAAIMDNDRVTFQTRSVIGATGSNRQTPEFSDVMEYMVINPSWYVPRSIVVN 356

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMAST 311
           + +  L+ +   +   +I + D  G+ +    V+++        +  RQ P + NA+   
Sbjct: 357 EYLPALQSNRNAVS--HIEITDSNGRAINRSNVNFSQFNSRTFPYSMRQPPSRGNALGLV 414

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF   VR  + GC+R+ +  D    LL           +  
Sbjct: 415 KFIFPNQYNIYLHDTPAKSLFGREVRAFSHGCIRLNDPFDFAYALLAAQEDDPEGVFQSH 474

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + T + T V L   VPVH VY +A++     + FR D+Y  D+     +  
Sbjct: 475 LDTGRETRVNLDEPVPVHLVYRTAFTHTTGQLNFRRDVYDRDSRIWDALAN 525


>gi|154253343|ref|YP_001414167.1| peptidoglycan-binding domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154157293|gb|ABS64510.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 399

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/384 (37%), Positives = 210/384 (54%), Gaps = 8/384 (2%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHL 104
                     +A       S  P++S ET+     AI  Y+ I + GGW  +     L L
Sbjct: 17  DPWQAETGAAVAEAPPFERSSAPVLSAETLLPLTHAIETYRVIANLGGWGYVASGERLEL 76

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V ++RERL  +GDL      +  +DA V  AV+ +Q+R+GL+P G+V   T+ A
Sbjct: 77  GVRDPRVVQVRERLTATGDLTVPAQDAELYDANVYEAVRRYQVRNGLEPDGIVGRRTIAA 136

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           MNV V  RIRQL++NL R+   +   +  RYV VNI    +EAV NG V  R  VIVG+ 
Sbjct: 137 MNVRVQTRIRQLELNLRRLSAAVPA-LPDRYVFVNIAGQEVEAVNNGIVEFREPVIVGKQ 195

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEV 281
           DRQTP + S +N I FNPYW +P+SI   DM+  +R +P YL+   I ++       +E+
Sbjct: 196 DRQTPEITSEVNSITFNPYWYVPKSIAMADMLPKIRANPDYLQRQGIRVLQGWDTNIREL 255

Query: 282 FVEEVDWNSPE-PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
               +DW++P     + FRQDPG  N++ S KI F +    ++HDTP   LF    R  +
Sbjct: 256 NPRNIDWSNPRINEAYYFRQDPGPGNSLGSLKINFPNNQAIFLHDTPTKTLFGRQERNFS 315

Query: 341 SGCVRVRNIIDLDVWLLK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           SGCVRV+N+  L  WL++ D+  W    +   V +R+   V LAT VP++ +Y++AW   
Sbjct: 316 SGCVRVQNVRGLVSWLMQGDSSEWDAARVARSVDSRQYRNVSLATPVPIYLMYLTAWVTP 375

Query: 400 DSIIQFRDDIYGLD-NVHVGIIPL 422
           + I+ FRDD+Y  D +V+   +  
Sbjct: 376 EGIVNFRDDVYDRDGSVNTSALEN 399


>gi|251789271|ref|YP_003003992.1| hypothetical protein Dd1591_1660 [Dickeya zeae Ech1591]
 gi|247537892|gb|ACT06513.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 563

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 114/428 (26%), Positives = 192/428 (44%), Gaps = 29/428 (6%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           YL    G+           +   +     +++        +      I S  P  S+   
Sbjct: 135 YLQFVAGVEKNGGNWLYGSVPYKLAAPSAAMIEQWQQAITSGNGAAFIASLAPRHSQ--Y 192

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-- 132
            +   A+     +     WP+L     L  G+ S ++  L+E L+ +G L          
Sbjct: 193 EKMHTALKNM--LTDNRPWPKLVLADSLRPGDESNALPVLQEILLRTGMLSQDSAAMPLF 250

Query: 133 ------------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
                        +D  +  AVK FQ   GL   G++   T + +NV   +R   L +N+
Sbjct: 251 NDATAAGNTAALRYDGEMVEAVKRFQHSQGLLDDGVIGKRTRDWLNVSSQMRAALLALNI 310

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R++ + ++      ++VNIP  SL   +NG   L S VIVG+  R+TP++ S ++ ++ 
Sbjct: 311 QRLRLVPDKV--SSGIVVNIPNYSLSYYQNGAEILSSRVIVGQPKRKTPLMSSSLSNVVM 368

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFI 297
           NP W +P ++ ++D++  + QDP YL+ +   ++       + +    +DW      NF 
Sbjct: 369 NPPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSGWTDSAQPIDPSMIDWPMMSAGNFP 428

Query: 298 FR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +R  Q PG  N++   K    + ++ Y+HDTP   LF   +R  +SGCVRV    +L   
Sbjct: 429 YRLRQAPGDSNSLGRYKFNMPNTDSIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAAL 488

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN- 414
           LL+D   W+   I   ++   TT V +   VPV+F Y++AW   D   QFR DIY  D+ 
Sbjct: 489 LLQDA-GWNNARISSTLEQGNTTYVAVRQRVPVNFYYLTAWVADDGKPQFRTDIYNYDDT 547

Query: 415 VHVGIIPL 422
           V  G + L
Sbjct: 548 VKTGTLAL 555


>gi|126729661|ref|ZP_01745474.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
 gi|126709780|gb|EBA08833.1| peptidoglycan binding protein, putative [Sagittula stellata E-37]
          Length = 540

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 108/413 (26%), Positives = 190/413 (46%), Gaps = 14/413 (3%)

Query: 18  LILPMGLSLVEKPIH--ASVLDEIINESYHSIVNDRFDNFLARVDMGI-DSDIPIISKET 74
           L +     L    +    +V+ +I  E       +            +  S +P      
Sbjct: 123 LFISFANDLQTGVLDDPGAVISDIKREVPRRAPEELLSRLTTERPDAVFRSLVP--PTAE 180

Query: 75  IAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            ++  +A    +  +  GGW P +    L  G S  +V  LR RL+    L PS      
Sbjct: 181 YSRLMRAKLMLEHRIRHGGWGPVVQASSLEPGESGQAVVALRNRLVAMNYLKPSLT--TR 238

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL-EQKMG 192
           +D  + +AV+  Q  HGL+  G+  +STL A+N   + R++ + V + R + L   +  G
Sbjct: 239 YDEDMTAAVRAVQEDHGLNVDGVAGASTLRAINAAPEERLKSIMVAMERERWLNSPEGRG 298

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSI 250
            R+VLVN+     + +++ KV   +  ++G+     +TP     +  ++ NPYW +PRSI
Sbjct: 299 KRHVLVNLVDFHAQIIDDDKVTFETRSVIGQNQSTHRTPEFSDTMEHMVINPYWYVPRSI 358

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPPNFIFRQDPGKINAMA 309
           I  + + LLR +P      ++ +ID +G+ V   +     S     +  RQ PG  NA+ 
Sbjct: 359 IVNEYLPLLRSNPG--AAGHLEIIDGRGRVVSRGQSFAQYSGRSFPYSMRQRPGPRNALG 416

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           + K  F ++ N Y+HDTP   LF+  VR  + GCVR+ +  D    LL           +
Sbjct: 417 TVKFMFPNKYNIYLHDTPSQSLFSREVRTFSHGCVRLNDPHDFAYALLSRQERDPVNFFQ 476

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            ++++ + T V LA  +PVH +Y +A++     + +R+D+YG D +    +  
Sbjct: 477 SILRSGQNTKVPLAEPIPVHLIYRTAFTQAKGNVNYRNDVYGRDEILWRALQN 529


>gi|193212014|ref|YP_001997967.1| peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085491|gb|ACF10767.1| Peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
          Length = 583

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/434 (29%), Positives = 204/434 (47%), Gaps = 28/434 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIV---NDRFDNFLARV--DMGIDSDIPIISKE 73
           +  +   +    +    LD   N          +D   + +        I S  P     
Sbjct: 138 LFTLLSHMRAGKVVPKSLDSNWNLPLSGPAKNSDDMLKSAVMDAKFPEMIASLRPSTP-- 195

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPL--HLGNSSVSVQRLRERLIISGDL------- 124
                 K +A Y+ + + GGW  +P  P    +G     +  +R+RL+++GDL       
Sbjct: 196 EYRLLRKGLAKYRKVAAAGGWKPVPAGPRIGDVGQIDERMPLIRKRLVVTGDLIEDGLTI 255

Query: 125 --------DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
                     +   +  + A +  AVK FQ RHGL+  G++ + T  AM VPV+  I Q+
Sbjct: 256 SAPANSADSTAARQAFVYTAELFDAVKAFQERHGLEVDGIIGTETAGAMAVPVEEWIDQI 315

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           ++NL R +      +G  YV+VNIP+ S+E V +  V  +S VIVG+ + QTP+  + I 
Sbjct: 316 RINLERYRWYSS-SLGSTYVMVNIPSFSVEFVRDDSVRWKSRVIVGKPNLQTPVFKAEIQ 374

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            ++FNP WVIP  I+ K+ +  ++++  YL  + + +++ +GK V    V+W + +   F
Sbjct: 375 SVIFNPRWVIPSGILAKEALPAIKKNLDYLSRHQLTVVNNQGKPVDPSSVNWAAYQGRGF 434

Query: 297 IFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            +R  Q  G   A+   K    +R   YMHDTP   LF    R  + GCVRV+N  +L V
Sbjct: 435 PYRLVQASGDDGALGRIKFNMPNRFTVYMHDTPTKPLFERSYRAFSHGCVRVQNPNELGV 494

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            L  D   W    IE ++ T KT  + L   +PV+F+Y +A+   D+ I FR D+Y  D 
Sbjct: 495 LLFNDPVKWDMNRIEAMIDTGKTRTINLPERIPVYFMYQTAFPDGDN-IDFRYDVYDRDP 553

Query: 415 VHVGIIPLPEDHPI 428
                +    +  I
Sbjct: 554 DLQKALDSTRERVI 567


>gi|114767686|ref|ZP_01446383.1| peptidoglycan binding protein, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114540304|gb|EAU43401.1| peptidoglycan binding protein, putative [Roseovarius sp. HTCC2601]
          Length = 525

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/403 (27%), Positives = 176/403 (43%), Gaps = 13/403 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINES--YHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     L    +    +D  I          +                  P        
Sbjct: 111 YLQFARDLSGGALDGRRIDSGIKREPARRGSEDLLEALATGEPRAVFRDLAPKTP--EYT 168

Query: 77  QTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +  +     + +++RGGW   + +  L  G+S   V  LR+RLI  G L P   LS  +D
Sbjct: 169 RLMREKLSLERVIARGGWGAPVTVGKLDPGDSGPGVVILRDRLIEMGYLKP--TLSARYD 226

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL-LEQKMGLR 194
             +  AV  FQ  HGL+  G+  SSTL A+NVP   R++ + V + R + +     +G R
Sbjct: 227 DALRDAVLAFQGDHGLEADGVAGSSTLSAVNVPATERLKSVIVAMERERWINFADGLGER 286

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +VLVNI       +++GKV   +  +VG    DR+TP     +  ++ NP W +PRSI+ 
Sbjct: 287 HVLVNIVDFHARIIDDGKVTFETRSVVGHQDPDRRTPEFSDVMEFMVINPSWYVPRSIVV 346

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE-VDWNSPEPPNFIFRQDPGKINAMAST 311
            + + LLR++P  +   ++ + D +G+ V         S     F  RQ PG  NA+   
Sbjct: 347 NEYLPLLRRNPGAVS--HLVITDSRGRRVNRGNGFAQYSAASFPFAMRQPPGPKNALGQV 404

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF    R  + GC+R+ +  D    LL              
Sbjct: 405 KFMFPNKYNIYLHDTPSKHLFARGQRTFSHGCIRLGDPKDFAYALLALQTDDPEGFFASR 464

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++    + V L   VPVH +Y +A++     + +R D+YG D 
Sbjct: 465 LRGGSESRVNLEQPVPVHLIYRTAFTQAKGRVNYRADVYGRDA 507


>gi|188591281|ref|YP_001795881.1| hypothetical protein RALTA_A0493 [Cupriavidus taiwanensis LMG
           19424]
 gi|170938175|emb|CAP63161.1| conserved hypothetical protein, COG2989; putative exported protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 529

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 118/425 (27%), Positives = 189/425 (44%), Gaps = 27/425 (6%)

Query: 29  KPIHASVLD-EIINESYHSIVNDRFDNF--------LARVDMGIDSDIPIISKETIAQTE 79
             +H   ++   ++ ++       FD            R+   I    P           
Sbjct: 103 SDLHGGRINPRAVHANFAPPAERPFDAATWLRDAVAQHRLPDAIRQAAPTFP--LYGTLR 160

Query: 80  KAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +A+A Y+DI  +  W    P LP   L  G        L  RL+  GDL         ++
Sbjct: 161 QALARYRDIARQPVWQQPLPPLPASKLTPGQPWAGAAALTARLVALGDLPAGTQPPARYE 220

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +   VK FQ RHGL   G++ ++TL  +N+P+  R+RQ+++ + R++       G R 
Sbjct: 221 GALVDGVKAFQSRHGLQADGVIGAATLAQLNLPIADRVRQIELTMERLRWTPLD--GPRM 278

Query: 196 VLVNIPAASLEAVE----NGKVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSI 250
           ++VN+P   L A E       + L   VIVG+  D +TP+    +  I F+PYW IP SI
Sbjct: 279 IVVNVPEFMLRAYEIRDGKLDIKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSI 338

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPPNFIFRQDPGKINAMA 309
            +++ +  LR+DP Y     +  +   GK V    E + ++    +   RQ PG +NA+ 
Sbjct: 339 ARRETVPRLRRDPGYFSRQGLEFVGGDGKAVTTLSEENLDAVLNGSLRIRQRPGPLNALG 398

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L D P W+   I 
Sbjct: 399 DIKFVFPNNENIYLHHTPSPQLFKRDRRDFSHGCIRVEAPVALAQFVLHDMPDWNEARIR 458

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP----LPED 425
           E +   K+  V+L   +PV   Y +  +  D  + F+ DIYG D +    +      P+ 
Sbjct: 459 EAMARGKSNTVRLQQPLPVVLAYGTVIARADGRVSFQPDIYGHDKLLDKALRQRTGRPQP 518

Query: 426 HPIDS 430
             I S
Sbjct: 519 RAIAS 523


>gi|84503420|ref|ZP_01001480.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
 gi|84388207|gb|EAQ01159.1| peptidoglycan binding protein, putative [Oceanicola batsensis
           HTCC2597]
          Length = 539

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 104/415 (25%), Positives = 191/415 (46%), Gaps = 20/415 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINE-----SYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
           L L   + +    +  S +D  I            +        A     + S  P   +
Sbjct: 125 LFLRYAVDVQTGVLKPSDVDSGIVRKVPLRDRRGYLEGI---TSADPAAFVASLPPQ--R 179

Query: 73  ETIAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               +  +     + +++ GG+   +  + L  G++  +V  LR RL+  G L    G+ 
Sbjct: 180 LEYTRLMREKLRLERLIASGGFGATVQAQSLEPGDTGEAVVALRNRLMTMGYLPRRVGV- 238

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +ESAV  FQ  HGL   G+  ++T+  +NVPV+ R++ + V + R + +  + +
Sbjct: 239 -TYDRDMESAVLRFQADHGLSEDGVAGTATIAEINVPVEERLKSVIVAMERERWI-NRDL 296

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRS 249
           G R+VLVN+       +ENGK+  ++  ++G+     +TP     +  ++ NP W +PRS
Sbjct: 297 GDRHVLVNLTDFHARIMENGKIYFKTRSVIGKNLSTHRTPEFSDVMEHMIVNPTWNVPRS 356

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINA 307
           I   + +   +++P    ++++ +ID +G+ V    V++ +    NF F  +Q P   NA
Sbjct: 357 IAVSEYLPAFKRNPY--SNSHLKLIDARGRVVDRGSVNFAAYSKRNFPFDLKQPPSSRNA 414

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F + +N Y+HDTP   LF+  VR  + GC+R+    +    LL          
Sbjct: 415 LGLVKFMFPNVHNIYLHDTPAKSLFSRDVRAFSHGCIRLNEPFEFAHALLAWQSDDPEGL 474

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
               + T + T + LA+ +PVH +Y +A S     + +R D+YG D      +  
Sbjct: 475 FRSTLNTGRETKIDLASPLPVHLIYRTAMSQPKGQMSYRRDVYGRDGRIWEALAR 529


>gi|152993980|ref|YP_001359701.1| hypothetical protein SUN_2408 [Sulfurovum sp. NBC37-1]
 gi|151425841|dbj|BAF73344.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 558

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 123/432 (28%), Positives = 201/432 (46%), Gaps = 20/432 (4%)

Query: 6   KINKILYCFFVYLILPMGL------SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV 59
           ++ +    + +Y  +  G       +L    I A  +          +        +  +
Sbjct: 131 QLYEEYANYVIYGSINWGALQARLSNLRVSAITAGWITY--KPDSSPLQVAENAVLMGSL 188

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERL 118
                   P   K       K +  Y  I   GGWP +     L  G+ + +V  LRERL
Sbjct: 189 KKAFQEAEPR--KYHYRALRKYLDKYIAIKENGGWPTVNIKGVLRPGHRNPAVPDLRERL 246

Query: 119 IISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           +I+GD  P      S  +D  ++ AV  FQ R+GL   G++  +TL+A+N  VD RI  +
Sbjct: 247 LITGDYIPCDESDESDLYDNCLKKAVIRFQKRNGLSAKGVIGKNTLKALNQTVDERITII 306

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           ++NL RIK L  ++   R++++NIP   L    NGK+ +   VIVG+    TPI  +R+ 
Sbjct: 307 KINLDRIKWL-HERPDNRHIIINIPDYRLYYEVNGKLKMTMKVIVGKRKNPTPIFSNRVK 365

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP 293
            ++ NPYW +P+SIIQK+M+  L ++P  +    I +    GK   +V    V+W     
Sbjct: 366 SVVLNPYWNVPKSIIQKEMIPKLLRNPHAMAGQGIDIYTGWGKDAKKVSGGSVNWAQYRY 425

Query: 294 P---NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                + F Q PG  NA+   K  F ++ + YMHDTP   LF    R  + GC+R+    
Sbjct: 426 SKTVPYRFAQRPGNRNALGRIKFLFPNQFHVYMHDTPTKYLFKRDKRSYSHGCIRLEKPK 485

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            +   +    P+       +++K++K T   L   +P+  VY++AW   D  +QFRDD+Y
Sbjct: 486 LMMETIASFNPSLELDKAYKILKSKKNTYFSLENTIPIDVVYLTAWVDYDGKLQFRDDVY 545

Query: 411 GLDNVHVGIIPL 422
             D + +  +  
Sbjct: 546 KYDELMIASVRR 557


>gi|304393082|ref|ZP_07375011.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294847|gb|EFL89218.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 492

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 176/362 (48%), Gaps = 9/362 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                  I FY  I   GGWP++P    L +G     V  LR+RL I+GD       S  
Sbjct: 50  YRGLATGITFYTQIAQSGGWPQVPEGGTLSVGVDDPRVPILRQRLYITGDYLGEDTQSTM 109

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FDA ++ AV  FQ R+G +P G V  +TL +MNVPV+ R+ QL++N  R   +    +G 
Sbjct: 110 FDAALKEAVVAFQNRNGQEPDGAVGPATLASMNVPVEKRLEQLRINQRRWDNMPA-SLGD 168

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R+VLVN+    LE +E  K  L   V+VG+    TP     I  I  NPYW +P SI  K
Sbjct: 169 RFVLVNMAGFELEVIEGEKTVLDMKVVVGKDYHSTPEFSDLIKTIEINPYWNVPASIANK 228

Query: 254 DMMA---LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           ++                    +++   + V V ++ W   +  N  FR  Q PG  NA+
Sbjct: 229 ELKLDYMKGAATLAKADSQGYEVVNGD-QVVPVSQIAWTKYKDDNLPFRIRQRPGPSNAL 287

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +++N Y+HDT    LF+  VR  + GCVR+    +L  +LL     W R  I
Sbjct: 288 GDMKFLFPNKHNVYLHDTQAKSLFSKTVRAFSHGCVRLHRPRELAEYLLA-ANGWDRAKI 346

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
           +EVV + + T VKL    PVH  Y++AW  +   IQFR DIYG D      +  P     
Sbjct: 347 DEVVASGERTRVKLEQPTPVHLAYMTAWLGRQGFIQFRPDIYGRDAEDAQQLAPPPSDDF 406

Query: 429 DS 430
           +S
Sbjct: 407 NS 408


>gi|309389689|gb|ADO77569.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium praevalens DSM
           2228]
          Length = 546

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 120/409 (29%), Positives = 205/409 (50%), Gaps = 18/409 (4%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVN-----DRFDNFLA--RVDMGIDSDIPIISKETIA 76
           L L    ++  +  EII E  +   +        +  LA   ++  ++S++P    +   
Sbjct: 133 LDLASDYLNGKINAEIIIEDNNYQADSLQSKKLLNALLAKENIEESLNSNLPKT--KAYQ 190

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAF 134
           +  + + +Y+D      WP++  +  L   +  V V+ LR+ L     L  +       F
Sbjct: 191 KLREKLFYYRDSGQINAWPQIKGKQILTKNSKGVRVKELRQNLKAKNYLTENNSKQDYIF 250

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              ++ AV  FQ+ +GL P G+V   TL+A+N+P+  RI+QL VN+ R + L  + +G R
Sbjct: 251 TEQLKEAVMKFQVDYGLTPDGVVGPKTLKALNIPLSERIKQLIVNMERWRWLP-ENLGDR 309

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y+ VNI    L+  E  +  +    IVG+  R TP+    I  ++ NPYW +P +I  +D
Sbjct: 310 YIYVNIANYKLKLYEEQQKIMEMKTIVGKKQRSTPVFSDEIKYLVLNPYWYVPHTIAVED 369

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGK----EVFVEEVDWNSP--EPPNFIFRQDPGKINAM 308
            + L+++D  YL+D N  +    G     ++   +VDW     +  N++ RQ+PG  NA+
Sbjct: 370 KLPLIKKDLNYLEDKNYSLFKYIGNNRLEKIDPTKVDWTKITKDNFNYLLRQNPGDQNAL 429

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++ + Y+HDTP   LF+   R  +SGC+R+   I+L  +LL D   W R +I
Sbjct: 430 GRIKFMFPNKFSIYLHDTPSQYLFSEQERSFSSGCIRIEKPINLAEYLLIDQEKWGRENI 489

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           E  +K  K   V L   + ++  Y +AW  K++ + FR+DIY  D   +
Sbjct: 490 EAAIKKDKEKIVYLKKPIKIYLQYNTAWVDKENNLNFREDIYNRDQKII 538


>gi|85857899|ref|YP_460101.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
 gi|85720990|gb|ABC75933.1| cell wall degradation protein [Syntrophus aciditrophicus SB]
          Length = 625

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 127/376 (33%), Positives = 200/376 (53%), Gaps = 12/376 (3%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV 111
               + ++  ++   P        +  + +  Y DI   GGW ++P   PL  G     V
Sbjct: 238 ALESSEMEATLNEVAPRF--YGYMKLRERLNEYIDIAEAGGWRKIPAGRPLMKGMRDKRV 295

Query: 112 QRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           + LR+RLI +G            FD  +E+AV+ FQ +HGL   G+V  +TL  +NVPV+
Sbjct: 296 RTLRKRLISTGMASLSQAKTDTYFDLDLETAVRRFQRQHGLREDGIVGRTTLVELNVPVE 355

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
           +RI Q+ VNL R++ L   ++G R++L+NIP  +LE VE+ +V +    IVG+ D++T +
Sbjct: 356 VRICQMAVNLDRLRWLP-YELGDRHILINIPDFNLEIVEDKRVVMHIRAIVGKTDKRTNL 414

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDW 288
           L SRI  I  NPYW IP+SI  ++ +  L+++P+YL    I +     +   V    + W
Sbjct: 415 LSSRITAIELNPYWKIPKSIAVEEFLPQLKRNPRYLGKK-IKVFAGDYQTNPVSPTSIKW 473

Query: 289 NSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +     NF +  RQ+PG  N +   K  F +  + Y+HDTP   LF    R  + GCVR+
Sbjct: 474 SRVTAENFPYFLRQEPGSDNPLGRVKFVFSNEADIYIHDTPTRNLFTQDKRSFSHGCVRI 533

Query: 347 RNIIDLDVWLLKDTP--TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
              +DL  +LLK  P   WS  +I+  ++  K  P+ L   VPVH VY + W  ++  + 
Sbjct: 534 EKPVDLAAYLLKIQPNNRWSSQNIQAEIRKGKNLPLPLNERVPVHIVYQTVWIDREGNLN 593

Query: 405 FRDDIYGLDNVHVGII 420
           FR DIY +DN+   ++
Sbjct: 594 FRPDIYDIDNIPANLL 609


>gi|242239070|ref|YP_002987251.1| hypothetical protein Dd703_1632 [Dickeya dadantii Ech703]
 gi|242131127|gb|ACS85429.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 564

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 186/420 (44%), Gaps = 31/420 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           Y+    G+           +   +     S                   + S  P  S+ 
Sbjct: 137 YMQFVAGVEKNGSHWLYGNVSYTLAAPPSSMVAQWQQAIHE--GSSAAFVASLAPRHSQ- 193

Query: 74  TIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD------- 125
             A+  +A+     +     WP L     L  G+ S ++  LR+ L+ +G L+       
Sbjct: 194 -YAKMHQALKDM--LTDNRPWPRLVLGETLRPGDESPALPVLRDILLRTGALNQGNVSMP 250

Query: 126 ------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
                 PS   ++ +D  +  AVK FQ   GL   G +   T + +NV    R   L +N
Sbjct: 251 LFNEAQPSGPEALRYDGELVEAVKRFQRLQGLQDDGSIGKRTRDWLNVSSQTRATLLALN 310

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + R++ + +       ++VNIP  SL    NG V L S VIVG+  R+TP++ S ++ ++
Sbjct: 311 IQRLRLVPDNV--NTGIMVNIPNYSLSYYLNGSVILSSRVIVGQPKRKTPLMSSSLSNVV 368

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSP--EPP 294
            NP W +P ++ ++D++  + QDP YL+ +   ++       +++    +DW        
Sbjct: 369 MNPPWNVPTTLTRQDIIPKVIQDPAYLQKHGYVLLSGWSEDAQQIDPAMIDWPMVSANNF 428

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            +  RQ PG  N++   K    + +  Y+HDTP   LF   +R  +SGCVRV    +L  
Sbjct: 429 PYRLRQAPGDNNSLGRYKFNMPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAA 488

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            LL+D   W+   I   ++   TT V +   +PV+F Y++AW   D   QFR DIY  D+
Sbjct: 489 LLLQDA-GWNNARISSTLEQGNTTYVSIRQRIPVNFYYLTAWVADDGKPQFRTDIYNYDD 547


>gi|295096375|emb|CBK85465.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 607

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 125/448 (27%), Positives = 197/448 (43%), Gaps = 43/448 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+S+       S     +     S++N  +       +   I S  P   +   
Sbjct: 165 YLQFVAGISVNGNRWLYSSKPYKLATPALSVINQWQLSLDNGELPRFIASLAPAHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
           A   +++   + +     WP+L     L  G  S  V  +RE +  SG LD    +    
Sbjct: 223 ATMHQSL--LELVADSRPWPQLRGTTTLRPGQWSSDVPAIREIMKRSGILDSGPKIALPG 280

Query: 131 -------------------------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                      A+D  + +AVK FQ   GL   G++  ST + +
Sbjct: 281 DETQNAVVSPSAPVKEKTAVALSNKPAAYDRELVAAVKQFQAAQGLGADGVIGPSTRDWL 340

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV    R   L +N+ R++ L         ++VNIPA SL   ++G   L S VIVGR D
Sbjct: 341 NVSPAQRAGVLALNIQRLRLLPGTL--STGIMVNIPAYSLVYYQDGSEVLASRVIVGRPD 398

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFV 283
           R+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +N  ++     +  +  
Sbjct: 399 RKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHNYTVMRGWNSKEAIDP 458

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             VDW++  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +S
Sbjct: 459 WMVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSS 518

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D 
Sbjct: 519 GCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRHNIPVNLYYLTAFVGADG 577

Query: 402 IIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             Q+R DIY  D     G   LP+   +
Sbjct: 578 RTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|256419987|ref|YP_003120640.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256034895|gb|ACU58439.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 549

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 175/407 (42%), Gaps = 12/407 (2%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
               G  +       S    E         +    D+ + +       + P+  +     
Sbjct: 146 FFAYGNKVWSGLTSDSAKSLEWFIPRKKINMESLLDSMVNKPASA--FEEPVNRQ--YKL 201

Query: 78  TEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
               +    D+     W  L    +      S   V  +++RL + GDL      S  F 
Sbjct: 202 LRNQLKKLSDLEKM-PWDSLKASRKLYKKEESDPLVTSVKQRLHLLGDL-ALADTSQLFT 259

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             ++SA++ FQ R GL   G + +  L A+NV    RIRQ+ +N+ RI+ +  +     Y
Sbjct: 260 PALDSAIRNFQDRTGLKTDGTIQAPLLNALNVTPRQRIRQILINMERIRWVPAEPPAE-Y 318

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +LVNIPA  L    N K+     V+VG+    T I  + +  ++F PYW +P  I+  ++
Sbjct: 319 LLVNIPAFKLYVYNNNKLDWTCNVVVGKPGANTVIFSNEVKYVVFAPYWNVPPGILVNEV 378

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKI 313
           +  ++++  YL   N+ ++   G  V    ++W      NF    RQ PG  NA+   K 
Sbjct: 379 LPAMKRNTGYLARQNMEVVTGSGSPVNAGSLNWARYSGGNFPYIIRQKPGGHNALGKVKF 438

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F +  N Y+HDTP   LF    R  + GC+RV     L  WLL+   TW++  I E + 
Sbjct: 439 LFPNEYNIYLHDTPSKGLFGENKRTFSHGCIRVSEPQHLAEWLLRKDSTWTQKKIVEAMN 498

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             K   V L   VPV+  Y +A+   D  + FRDD+YG D      +
Sbjct: 499 GSKEKFVTLKERVPVYIGYFTAFVDSDGRLNFRDDVYGHDAKLAATL 545


>gi|307131496|ref|YP_003883512.1| putative carboxypeptidase [Dickeya dadantii 3937]
 gi|306529025|gb|ADM98955.1| predicted carboxypeptidase [Dickeya dadantii 3937]
          Length = 562

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 115/427 (26%), Positives = 198/427 (46%), Gaps = 28/427 (6%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           Y+    G+         S +   ++    +++   +           + S  P  S+   
Sbjct: 135 YMQFVAGVEKNGNSWLYSSVPYKLSMPSAAMIEQWQQAVASGNGLAFMASLAPRHSQ--Y 192

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+   A+     +     WP+L     L  G+ S ++  L+E L+ +G L+        F
Sbjct: 193 AKMHDALKTM--LTDNRPWPKLILADSLRPGDESSALPVLKEILLRTGMLNQDGAAMPLF 250

Query: 135 DA-------------YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +               V  AVK FQ   GL   G++   T + +NV   +R   L +N+ 
Sbjct: 251 NEASSGNVSPLRYEGEVVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQMRATLLALNIQ 310

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ + ++      ++VNIP  SL   +NG   L S VIVG+  R+TP+++S ++ ++ N
Sbjct: 311 RLRLVPDKV--SSGIVVNIPNYSLSYYQNGAEILSSRVIVGQPKRKTPLMNSSLSNVVMN 368

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIF 298
           P W +P ++ ++D++  + QDP YL+ +   ++ +     + +    +DW      NF +
Sbjct: 369 PPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSAGNFPY 428

Query: 299 R--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           R  Q PG  N++   K    + +  Y+HDTP   LF   +R  +SGCVRV    +L   L
Sbjct: 429 RLRQAPGDSNSLGRYKFNMPNTDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASELAALL 488

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-V 415
           L+D   W+   I   ++   TT V +   VPV+F Y++AW   D   QFR DIY  D+ V
Sbjct: 489 LQDA-GWNNARISSTLEQGNTTYVAVRQRVPVNFYYLTAWVADDGKPQFRTDIYNYDDTV 547

Query: 416 HVGIIPL 422
            +G + L
Sbjct: 548 KIGALAL 554


>gi|237730888|ref|ZP_04561369.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906427|gb|EEH92345.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 622

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 117/408 (28%), Positives = 187/408 (45%), Gaps = 18/408 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   + S  P   +   
Sbjct: 204 YLHFIANIPVKGNRWLYSDKPYALTTPPISVINQWQVALDNGQLTSFVASLAPQHPQ--Y 261

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-- 132
           A   +++     +     WP+L     L  G  S  +  LRE L  +G L+P+   S   
Sbjct: 262 AAMHESLLKL--VGDTRPWPQLTSTATLRPGEWSNDIPALREILRRTGMLEPAVSTSGKE 319

Query: 133 ---AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L  +
Sbjct: 320 GRGTYDRELVDAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPSE 379

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 380 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 437

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++        +   +VDW +    N  FR  Q PG  
Sbjct: 438 LARKDILPKVWNDPGYLERHGYTVMRGWNSKETIDPWQVDWATITASNLPFRFQQAPGAR 497

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 498 NSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSGCVRVNKASELANMLLQDA-GWND 556

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 557 TRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGPDGRTQYRTDIYNYD 604


>gi|307545799|ref|YP_003898278.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
 gi|307217823|emb|CBV43093.1| hypothetical protein HELO_3209 [Halomonas elongata DSM 2581]
          Length = 546

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 117/424 (27%), Positives = 189/424 (44%), Gaps = 26/424 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDE----IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
            +L     L    +    +++     I      +           V   ID   P     
Sbjct: 126 TLLTALTHLQRGKVDPQRINDEWDLSIEPPSLDLAAISRALDDGDVSAAIDLARPPYEP- 184

Query: 74  TIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLII----------S 121
              Q  + +A Y++I  +GGWP L     PL  G++   V  LRERL             
Sbjct: 185 -YEQLREGLAHYREIKRQGGWPALMNVEDPLRPGDTGTEVTALRERLAAIGNDQLVAADE 243

Query: 122 GDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           G              +D  +  AV+ FQ  H L   G+V   TL+A+N+ V+ RI Q++ 
Sbjct: 244 GYYPTIELQAPEPRVYDEALVEAVRRFQRHHLLADDGVVGPRTLKALNMSVERRIDQIRA 303

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           N+ R + LL   +   +VLV+I    L          R+ ++VG+  R+TP L S I  +
Sbjct: 304 NMERARWLL-HGLPESFVLVDIAGYDLRYFRPNGDTWRARIVVGQPYRRTPSLRSEITHL 362

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W +P +I+++D++  +R+DP YL   N+ ++   GK++    VDW+   P   + 
Sbjct: 363 TINPTWTVPPTIMREDVLPKVRRDPGYLATKNLSVLSPSGKQLDPASVDWS--NPGGVML 420

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           RQ  G  N +    + F + +  Y+HDTP   LF+   R  +SGC+RV  +++L   L  
Sbjct: 421 RQQAGPNNPLGQLVVRFPNDHLVYLHDTPSRGLFSRSQRALSSGCIRVEGVLELAQLLFD 480

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           DT   ++ ++  ++   KT  V LA  VPV   Y +     D  + FR DIY  D+  + 
Sbjct: 481 DTG--TQANVRRLIADGKTRNVLLARHVPVVLHYWTVQPEPDGELAFRPDIYDRDDALIE 538

Query: 419 IIPL 422
            +  
Sbjct: 539 ALDR 542


>gi|28898690|ref|NP_798295.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
 gi|28806908|dbj|BAC60179.1| putative amidase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 529

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/397 (25%), Positives = 172/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    LD+ +        ++  F+   A +        P   ++ ++     
Sbjct: 159 TLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLS----- 213

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ I G D+         +D  +E 
Sbjct: 214 ---------------------RVGDPIENKSTLVERMAIVGVDVSYIDSEIPQYDENLEL 252

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL+  G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 253 AVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALNAERSRIWAKER--DNVVFVNV 310

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 311 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVK 370

Query: 261 QDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 371 RNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMP 430

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV N   L   L K      R   +       
Sbjct: 431 NPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSS 490

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 491 TTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 526


>gi|73537776|ref|YP_298143.1| hypothetical protein Reut_B3942 [Ralstonia eutropha JMP134]
 gi|72121113|gb|AAZ63299.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 557

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 106/421 (25%), Positives = 181/421 (42%), Gaps = 21/421 (4%)

Query: 20  LPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDN--------FLARVDMGIDSDIPII 70
           L   +      +H+  +D   ++ ++ +  +  F+            R+   I    P  
Sbjct: 104 LSDAMRRYLSDLHSGRVDPRKVHANFTAPPSTAFEPDSYLRAAVAGHRLPEAIREAAPSF 163

Query: 71  SKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
                     A+A Y+ + ++ GW    P LP   L  G +   +  +  RL   GD+  
Sbjct: 164 P--LYGTLRDALAHYRTLAAQPGWDRTLPALPGGKLTSGQAYSGLAEMARRLQALGDMPA 221

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +   V   VK FQ RHGL+  G++ + TL  +N     R+RQ+++ + R++  
Sbjct: 222 DAPAPKRYSGAVVDGVKAFQARHGLEADGVIGAGTLAQLNTTPAARVRQIELTMERLRWT 281

Query: 187 LEQKMGLRYVLVNIPAASLEAVENG----KVGLRSTVIVGRV-DRQTPILHSRINRIMFN 241
                  R ++VNIP   L A +       + L   VIVG+  D +TP+    +  I F+
Sbjct: 282 PLTDSP-RMIVVNIPEFMLRAYDYNGGKLDIKLEMKVIVGKALDTRTPLFKEDMRYIEFS 340

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           PYW +P SI + + +  LR+DP Y        +        + + + ++        RQ 
Sbjct: 341 PYWNVPPSIARSETIPRLRRDPAYFTQQGFEFVSNGKAVTTLSDANLDAVLNGRMRIRQR 400

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG +NA+   K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L+D P
Sbjct: 401 PGPMNALGDIKFVFPNNQNIYLHHTPTPQLFKRDRRDFSHGCIRVEEPVALAKFVLQDMP 460

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W+   I + +   ++  V L   +PV   Y +A +  D  + F  DIYG D +    + 
Sbjct: 461 GWTEERIRQAMTKGQSNTVALQQPLPVVLAYGTAIARADGRVYFLPDIYGQDKLLDQALS 520

Query: 422 L 422
            
Sbjct: 521 Q 521


>gi|328474745|gb|EGF45550.1| putative amidase [Vibrio parahaemolyticus 10329]
          Length = 513

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 103/397 (25%), Positives = 171/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    LD+ +      +  +  F+   A +        P   ++        
Sbjct: 143 TLSVLSNEITVGKLDQFLASLRSPLQKDASFNTVFASLSEFSQYQYPFYEQK-------- 194

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                               L +G+   +   L ER+ I G D+         +D  +E 
Sbjct: 195 ------------------GLLRIGDPIENKSTLVERMAIVGVDVSYIDSEIPQYDENLEL 236

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL+  G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 237 AVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALNAERSRIWAKER--DNVVFVNV 294

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 295 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVK 354

Query: 261 QDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 355 RNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMP 414

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV N   L   L K      R   +       
Sbjct: 415 NPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSS 474

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 475 TTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|227329504|ref|ZP_03833528.1| hypothetical protein PcarcW_20031 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 579

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 109/431 (25%), Positives = 181/431 (41%), Gaps = 40/431 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +IV+  +           + S  P  S+   
Sbjct: 139 YLQFVSGVENSGNDWLYSSVPYRLQSPALNIVSQWQQAVKSGTSAAYVVSLAPQHSQ--Y 196

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A+  +A+     +     WP L     L     S  +  LRE L  +G L          
Sbjct: 197 AKMHEALKTM--LTDNRPWPSLSLAESLRPEQQSRELAVLREILQRTGMLSSTESITLFN 254

Query: 127 ------------------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                             S      +   +  AVK FQ   GL+  G++   T + +NV 
Sbjct: 255 ENTAATTVSTGQVPLVDGSGTSDDRYTGELVDAVKRFQHWQGLEDDGVIGKRTRDWLNVS 314

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +R   L +N+ R++ L +       ++VNIP  SL   ++G   L S VIVG+  R+T
Sbjct: 315 PQMRATLLALNIQRLRLLPDNV--HTGIMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKT 372

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEE 285
           P++ S +  ++ NP W +P ++ ++D++  + +DP YL+ +   ++    +    +    
Sbjct: 373 PLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEAIDPSM 432

Query: 286 VDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           +DW         +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +SGC
Sbjct: 433 IDWQMVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGC 492

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VRV    +L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D   
Sbjct: 493 VRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRP 551

Query: 404 QFRDDIYGLDN 414
           QFR DIY  D+
Sbjct: 552 QFRTDIYNYDD 562


>gi|260363711|ref|ZP_05776495.1| putative amidase [Vibrio parahaemolyticus K5030]
 gi|260879722|ref|ZP_05892077.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|260898804|ref|ZP_05907245.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|260901617|ref|ZP_05910012.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308086665|gb|EFO36360.1| putative amidase [Vibrio parahaemolyticus Peru-466]
 gi|308093310|gb|EFO43005.1| putative amidase [Vibrio parahaemolyticus AN-5034]
 gi|308108675|gb|EFO46215.1| putative amidase [Vibrio parahaemolyticus AQ4037]
 gi|308113388|gb|EFO50928.1| putative amidase [Vibrio parahaemolyticus K5030]
          Length = 513

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/397 (25%), Positives = 172/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    LD+ +        ++  F+   A +        P   ++ ++     
Sbjct: 143 TLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLS----- 197

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ I G D+         +D  +E 
Sbjct: 198 ---------------------RVGDPIENKSTLVERMAIVGVDVSYIDSEIPQYDENLEL 236

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL+  G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 237 AVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALNAERSRIWAKER--DNVVFVNV 294

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 295 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVK 354

Query: 261 QDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 355 RNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMP 414

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV N   L   L K      R   +       
Sbjct: 415 NPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSS 474

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 475 TTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|317491480|ref|ZP_07949916.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316921027|gb|EFV42350.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 608

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 123/458 (26%), Positives = 189/458 (41%), Gaps = 67/458 (14%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+S  +     S +   I E   ++VN+ +      R+   + S  P   +   
Sbjct: 140 YLQFVSGVSATKGSWLYSSVPYAIAEPPATLVNNWQLSVRDGRLATFVQSLAPSHPQ--Y 197

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   KA+     +     WP +   P L  G+ S  +  LRE L  +G L          
Sbjct: 198 AAMHKALKDL--LADTRPWPTVNDGPSLKPGDLSPDMPALREVLQRTGMLTEKGNVKSPT 255

Query: 126 --------------------------------------------PSKGLSVAFDAYVESA 141
                                                       P       +   +  A
Sbjct: 256 PVPEAQPLQSPASQEPNAVISPSTTAVSELTQQPTPEATPAKTMPVSATDNRYTPELVEA 315

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ   GL   G++   T E +NV    R   L +N+ R++ L  +      ++VNIP
Sbjct: 316 VKRFQQWQGLASDGVIGKRTREWLNVSPQTRATLLALNIQRLRILPGEV--DTGIMVNIP 373

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             SL   +NG   L S VIVGR  R+TP+++S +N ++ NP W +P ++I++D++    +
Sbjct: 374 NYSLIYYQNGTEVLTSRVIVGRPTRKTPLMNSELNNVVVNPPWNVPTTLIREDIVPKAMR 433

Query: 262 DPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFY 316
           DP Y + +   +          V    +DW S  P NF +R  Q PG  N++   K    
Sbjct: 434 DPGYFERHGYRLFSGWSNDAEVVDPYMIDWASVSPRNFPYRIQQAPGVNNSLGRYKFNMP 493

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           S++  Y+HDTP   LF   +R  +SGCVRV     L   LL+D   W+   +   +K   
Sbjct: 494 SQDAIYLHDTPNHGLFEKDIRALSSGCVRVNKASTLANMLLQDA-GWNDARVSSALKEGN 552

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           T  V +   +PV   Y++AW  +D   QFR DIY  D+
Sbjct: 553 TKYVPIRHRIPVRLYYLTAWVSEDGKPQFRTDIYNYDD 590


>gi|296103072|ref|YP_003613218.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057531|gb|ADF62269.1| hypothetical protein ECL_02728 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 607

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 124/448 (27%), Positives = 196/448 (43%), Gaps = 43/448 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+ +       S     +     S++N  +       +   I S  P   +   
Sbjct: 165 YLQFVAGIPVNGNRWLYSQKPYKLATPALSVINQWQLALDNGDLPRFIASLAPAHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
           A   +++   + +     WP++     L  G  S  V  +RE +  SG L+    +    
Sbjct: 223 ATMHQSL--LELVADSRPWPQVRGTTTLRPGQWSSDVPAIREIMKRSGILESGPKIALPG 280

Query: 131 -------------------------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                      A+D  + +AVK FQ   GL   G++  ST + +
Sbjct: 281 DDTQSAVVSPSAPVKEKKAVAQSNKPAAYDRELVAAVKQFQAAQGLGADGVIGPSTRDWL 340

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV    R   L +N+ R++ L         ++VNIPA SL   +NG   L S VIVGR D
Sbjct: 341 NVSPAQRAGVLALNIQRLRLLPGTL--STGIMVNIPAYSLVYYQNGSEVLASRVIVGRPD 398

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFV 283
           R+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +N  +I        +  
Sbjct: 399 RKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHNYTVIRGWNSKETIDP 458

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             VDW++  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +S
Sbjct: 459 WMVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSS 518

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  +D 
Sbjct: 519 GCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRHNIPVNLYYLTAFVGEDG 577

Query: 402 IIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             Q+R DIY  D     G   LP+   +
Sbjct: 578 RTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|152991962|ref|YP_001357683.1| hypothetical protein SUN_0366 [Sulfurovum sp. NBC37-1]
 gi|151423823|dbj|BAF71326.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 712

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/351 (32%), Positives = 186/351 (52%), Gaps = 8/351 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLD-PSKGLSV 132
             +  +A+  Y++I   GGW +LP  + L  G SS  V  LRERL I GD    S     
Sbjct: 354 YDRMLQALKRYKEIAENGGWKKLPEFKNLKPGMSSSVVPALRERLAIEGDYVCDSNETGN 413

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   +  AVK FQ RHGL+ +G +   T +A+NV  + ++++L++NL RIK + ++   
Sbjct: 414 RYRGCLVDAVKKFQARHGLEAAGFIGKMTRKALNVSAEEKVKKLKLNLDRIKWI-KRDNE 472

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             ++ VNIP+  +   ++ ++     VI GR   +TPI + R+  I+ NPYW IP SII+
Sbjct: 473 RYHIYVNIPSFHMYMYDDKEMIRTMRVITGRKGHETPIFYGRVRTIVLNPYWRIPPSIIR 532

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSP--EPPNFIFRQDPGKINA 307
            + +  L++DP Y    NI +     +   +V   +V+W+    + P + F Q PG+ NA
Sbjct: 533 HETIPKLQKDPGYTNKKNIEIHTGYSEHSPKVNPYKVNWHKYGRKLPPYRFMQSPGEKNA 592

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F ++ + YMHDT +  LF    R  + GCVR++   +L     +  P      
Sbjct: 593 LGKVKYLFPNKYSVYMHDTNQRYLFVKDYRALSHGCVRLQKPFELLETFAEIEPKIDYER 652

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +E++   K TP +L+  +PV  VY++A   K+  + F DD+YG D + + 
Sbjct: 653 SKEILDENKKTPYRLSKSIPVDIVYLTALVSKEGTVMFYDDVYGYDRMQMA 703


>gi|283784752|ref|YP_003364617.1| hypothetical protein ROD_09941 [Citrobacter rodentium ICC168]
 gi|282948206|emb|CBG87773.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 624

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 124/432 (28%), Positives = 191/432 (44%), Gaps = 42/432 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+ +       S     +     S++N  +       +   I S  P   +   
Sbjct: 182 YLQFVAGIPVNGNRWLYSNKPYKLATPALSVINQWQLALDNGELPRFIASLAPAHPQ--Y 239

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
           A+  +++     +     WP+L     L  G  S  V  LRE L  SG LD    +    
Sbjct: 240 ARMHQSLLAL--VGDSRPWPQLRSAATLRPGQWSSDVPALREILKRSGMLDGGPKIALPG 297

Query: 131 -------------------------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                      A+D  + +AVK FQ   GL   G +  +T   M
Sbjct: 298 DDAQNVVVSPSAPVKEKQAAVVSNKPAAYDRELVAAVKQFQAWQGLGADGAIGPATRYWM 357

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L S VIVGR D
Sbjct: 358 NVTPAQRAGGLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGSQVLASRVIVGRPD 415

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFV 283
           R+TP++ S +N ++ NP W +P ++ +KD++  L  DP YL+ +   ++     +  +  
Sbjct: 416 RKTPMMSSALNNVVVNPPWNVPPTLARKDILPKLWNDPGYLERHGYTVMRGWNSKDAIDP 475

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            +VDW++  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF+   R  +S
Sbjct: 476 WQVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFSKDARALSS 535

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D 
Sbjct: 536 GCVRVNKASELANMLLQDA-GWNDTRISDALKQGNTRYVTIRQTIPVNLYYLTAFVGADG 594

Query: 402 IIQFRDDIYGLD 413
             Q+R DIY  D
Sbjct: 595 RTQYRTDIYNYD 606


>gi|153839457|ref|ZP_01992124.1| putative amidase [Vibrio parahaemolyticus AQ3810]
 gi|149747014|gb|EDM58002.1| putative amidase [Vibrio parahaemolyticus AQ3810]
          Length = 509

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/397 (25%), Positives = 172/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    LD+ +        ++  F+   A +        P   ++ ++     
Sbjct: 139 TLSVLSNEITVGKLDQFLASLRSPLQMDASFNTVFASLSEFSQYQYPFYEQKGLS----- 193

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ I G D+         +D  +E 
Sbjct: 194 ---------------------RVGDPIENKSTLVERMAIVGVDVSYIDSEIPQYDENLEL 232

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL+  G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 233 AVKEFQRIHGLNQDGVIGPNTIRWINFSPQQRLHLLALNAERSRIWAKER--DNVVFVNV 290

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 291 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVK 350

Query: 261 QDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 351 RNPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQASGSHNALGLYKFNMP 410

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV N   L   L K      R   +       
Sbjct: 411 NPQAIYLHDTPSKNLFQQDRRAFSSGCVRVENADQLAELLFKTQGLEERLEKKRESARSS 470

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           TT V L   +PVH +Y +AW  ++  + +RDDIY  D
Sbjct: 471 TTSVPLGERIPVHIIYQTAWL-EEGTLYYRDDIYKYD 506


>gi|269961715|ref|ZP_06176076.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833580|gb|EEZ87678.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 530

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/398 (25%), Positives = 176/398 (44%), Gaps = 34/398 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LSL+   I    LDE +NE      +++ F+   A +      + P+  ++      + 
Sbjct: 159 TLSLLSNEITVGKLDEFLNELRSPLQMDESFNTAYASLSTYAKFEFPLYQQD------QR 212

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
           +A                    +G+       +  R+ I G D+      +  +D  +E 
Sbjct: 213 LAR-------------------VGDELFDKASMIARMQIVGVDVGHLDTETTLYDENLEL 253

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV  FQ  HGL   G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 254 AVMEFQRIHGLKQDGIIGPNTIRWINFSPQQRLHSLALNAERSRIWAKER--DNVVFVNV 311

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VG+  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 312 PGYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTLDSVILNPTWNVPWKIMVKDIIPKVK 371

Query: 261 QDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL  +NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 372 RNPMYLMQHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQSSGSHNALGLYKFNMP 431

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LFN   R  +SGCVRV +   L   L K      R   +     R 
Sbjct: 432 NPQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRQNGRRS 491

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            T V L+  + VH +Y +AW  ++  + +RDDIY  D+
Sbjct: 492 NTSVPLSERIQVHIIYQTAWL-EEGTLYYRDDIYQYDD 528


>gi|311747884|ref|ZP_07721669.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
 gi|126575878|gb|EAZ80188.1| putative peptidoglycan binding protein [Algoriphagus sp. PR1]
          Length = 548

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 195/419 (46%), Gaps = 17/419 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD------EIINESYHSIVN--DRFDNFLAR--VDMGIDSDI 67
           + L      + + +    +D      +          +     +  +A   +   ++S  
Sbjct: 133 IFLSDAFFKLARNLEIGKVDPSQFGEDWEIARKEPTNDYPTLLEKAVATKAIRKSLESLY 192

Query: 68  PIISKETIAQTEKAIAFYQDILSRGG--WPELP-IRPLHLGNSSVSVQRLRERLIISGDL 124
           P  S     +  + I    + +      W ++   + +H+G+S+  + RLRERLI    L
Sbjct: 193 PKFS--IYKKGREVIRELSEKVKEDTLNWKKVKISKSIHVGDSNSDIPRLRERLIYWELL 250

Query: 125 DPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           +         +D+ +   +K FQ  HGLD  G++   T +A N     R+ + +VN+ R+
Sbjct: 251 EEYAVQDEKVYDSIMMDGIKDFQGTHGLDIDGVIGPQTAQAFNDSPKDRLNKARVNMERL 310

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L +      ++LVN+    L+ ++N    +   VIVGR   ++PI  + ++ I+F+PY
Sbjct: 311 RWLPDTVKNAEFILVNLANFQLDYLKNLDTLISERVIVGRKYHESPIFMAEMSYIVFSPY 370

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W IP SI   +++  +R++P Y+   N+ ++   GK +    ++WNS +   ++ RQ PG
Sbjct: 371 WNIPYSITHSEIIPSVRKNPNYIAAKNMEVVTSSGKVLDPSTINWNS-KSFPYMVRQKPG 429

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   K  F +++N Y+HDT    LF    R  + GC+R++N  D    LL   P W
Sbjct: 430 PGNSLGLVKFMFPNKHNVYIHDTNARSLFALDDRARSHGCIRIQNPQDFAKELLSYDPYW 489

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +   I+E +       V+L   +PV  VY++ W+       FR+DIY  D   +  +  
Sbjct: 490 TSEKIDEAMHQTHEKVVQLDRHIPVVLVYLTFWADSKGEAHFREDIYERDEEVLVALGK 548


>gi|271500170|ref|YP_003333195.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270343725|gb|ACZ76490.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 567

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 28/429 (6%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           Y+    G+           +   +     +++   +           I S  P  S+   
Sbjct: 140 YMQFVAGVEKNGNSWLYGSVPYKLALPPVAMMEQWQRAMASGNGAAFIASLAPHHSQ--Y 197

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+   A+     ++ +  WP+L     L  G+ S  +  LRE L+ +G L  +      F
Sbjct: 198 AKMHVALKDM--LMDKRPWPKLMLADSLRPGDESNGLPVLREILLRTGMLSQNSAAMPLF 255

Query: 135 DA-------------YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +               +  AVK FQ   GL   G++   T + +NV   +R   L +N+ 
Sbjct: 256 NEASPGNASPLRYEGELVEAVKRFQHSQGLQDDGVIGKRTRDWLNVSSQMRATLLALNIQ 315

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ + +       ++VNIP  SL   ++G   L S VIVG+  R+TP++ + ++ ++ N
Sbjct: 316 RLRLVPDNV--NSGIMVNIPNYSLIYYQHGAEILSSRVIVGQPKRKTPLMSTSLSNVVMN 373

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNF 296
           P W +P ++ ++D++  + QDP YL+ +   ++ +     + +    +DW         +
Sbjct: 374 PPWNVPTTLTRQDIIPKVIQDPGYLQRHGYTVLSDWTESAQPIDPSMIDWPMVSASNFPY 433

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    + ++ Y+HDTP   LF   +R  +SGCVRV    +L   L
Sbjct: 434 RLRQAPGDSNSLGRYKFNIPNTDSIYLHDTPNHALFQKDIRALSSGCVRVNKASELAALL 493

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-V 415
           L+D   W+   I   ++   TT V +   +PV+F Y++AW   D   QFR DIY  D+ V
Sbjct: 494 LQDA-GWNNARISSTLEQGNTTYVAVRQRIPVNFYYLTAWVADDGKPQFRTDIYNYDDTV 552

Query: 416 HVGIIPLPE 424
             G + L +
Sbjct: 553 KTGALALSK 561


>gi|253688167|ref|YP_003017357.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251754745|gb|ACT12821.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 576

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 110/428 (25%), Positives = 186/428 (43%), Gaps = 37/428 (8%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +IV+  +           + S  P  S+   
Sbjct: 139 YLQFVSGVERNGNDWLYSSVPYRLQSPALNIVSQWQQAVKSGTSAAYVVSLAPQHSQ--Y 196

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           A+  +A+     +     WP L     L     S  +  LRE L  +G L  ++ ++   
Sbjct: 197 AKMHEALKTM--LTDNRPWPSLNLTESLRPEQQSRELAVLREILQRTGMLSSTESITLFN 254

Query: 132 --------------------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                                 +   +  AVK FQ   GL+  G++   T + +NV   +
Sbjct: 255 ENTAATTIPTGQSPLVENGAAIYTGELVEAVKRFQHWQGLEDDGVIGKRTRDWLNVSPQM 314

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R   L +N+ R++ L +       ++VNIP  SL   ++G   L S VIVG+  R+TP++
Sbjct: 315 RATLLALNIQRLRLLPDNV--HTGIMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTPLM 372

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDW 288
            S +  ++ NP W +P ++I++D++  + +DP YL+ +   ++    +    +    +DW
Sbjct: 373 SSSLYNVVVNPPWNVPTTLIRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEVIDPSMIDW 432

Query: 289 NSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
               P    +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +SGCVRV
Sbjct: 433 QIVSPERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCVRV 492

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
               +L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D   QFR
Sbjct: 493 NKASELASMLLQDA-GWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQFR 551

Query: 407 DDIYGLDN 414
            DIY  D+
Sbjct: 552 TDIYNYDD 559


>gi|296446244|ref|ZP_06888191.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296256281|gb|EFH03361.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 476

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 128/354 (36%), Positives = 195/354 (55%), Gaps = 7/354 (1%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
            P +  ET   T  A   Y  I   GGWP++    L  G+S  +V  LR+RL + GDL  
Sbjct: 118 TPALQPETFFTTSLASERYAAIADAGGWPKV-GAALKPGSSGRAVAALRKRLAVEGDLPS 176

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +      +D  +  AVK FQ R GL  +G+V  +TL  ++VP ++R RQL  +  R+   
Sbjct: 177 AAAAGEGWDGALTQAVKHFQFRMGLKQTGVVAGATLRELDVPANVRFRQLASSAQRLAG- 235

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                G RY++VNIP+A+++AVENG+V  R T IVG VD  +P + +R+  +  NP W +
Sbjct: 236 NNFPFGPRYIVVNIPSAAVDAVENGRVVRRYTAIVGGVDHPSPEVEARVGAVNLNPTWTV 295

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SII+ ++M  ++++P YL    I ++D  G EV  + ++W +    N+  RQD G  N
Sbjct: 296 PVSIIKNEIMPKMQKNPSYLAKLRIRVLDNHGAEVDPKTINWANERAANYTLRQDSGAGN 355

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT---- 362
           ++ S +I   +++  YMHDTP   LF +  RF + GCVRV  + DL  WLL+        
Sbjct: 356 SLGSIRIAMPNKHAVYMHDTPSKRLFASDYRFLSHGCVRVEGVYDLAAWLLQGASGSPSG 415

Query: 363 -WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            W +  I   +   +   V L   VPV +VY++ W+  D  + FR+D+YG+D V
Sbjct: 416 QWDKAAILAKIAGGERQDVALPKPVPVVWVYMTGWASADGTVHFRNDVYGVDAV 469


>gi|114047885|ref|YP_738435.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889327|gb|ABI43378.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 560

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 212/438 (48%), Gaps = 25/438 (5%)

Query: 14  FFVYL---ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRF-----DNFLARVDMGID 64
           F V L   I+   + L+   ++ S+L +  N +  H   +              V   I 
Sbjct: 120 FEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDETHLDFDTTLKQLEEHIKAHTVADAIA 179

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
              P I+     Q ++ +A Y+D+ +R  +  +P    +  G++S SVQ +  RL   G 
Sbjct: 180 GLAPKIAP--YQQLKQYLAQYKDLAARYPFSPIPYTEVIKPGSTSPSVQGIATRLTELGY 237

Query: 124 LDPSKGLSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L  S              +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP   R+ Q
Sbjct: 238 LAASAPADNSAAVSQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQRVEQ 297

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +++NL R + L    +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++
Sbjct: 298 IRINLERARWL-SANLRANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKL 356

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EP 293
             ++ NP W +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S   + 
Sbjct: 357 KYVVVNPTWTVPRSI-STEIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKN 415

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             + F Q+PG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L 
Sbjct: 416 FPYWFVQEPGEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLA 475

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL     WS   +   +   KT  + L   + +  +Y +    KD  I+F +D+Y  D
Sbjct: 476 DKLLSANANWSSNTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYNDVYKRD 534

Query: 414 NVHVGIIPLPEDHPIDSD 431
            V +  +  P    + +D
Sbjct: 535 PVLIEALNRPTYEGVLAD 552


>gi|312114029|ref|YP_004011625.1| peptidoglycan-binding protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219158|gb|ADP70526.1| Peptidoglycan-binding domain 1 protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 428

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/390 (38%), Positives = 219/390 (56%), Gaps = 9/390 (2%)

Query: 34  SVLDEIINESYHSI-VND-RFDNFLAR-VDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           S +D+ +              D    R  +   +   P ++KE IA T+ AI  Y +I++
Sbjct: 33  SSIDDWLGFDQSDDSWEQPMRDRAFQREWETQPERGFPTLAKENIATTKTAIKQYAEIVA 92

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RGGWP+LP   L  G S  +V +LR RL ++GDL    G    FD+YVE AVK  Q RHG
Sbjct: 93  RGGWPQLPPIELRTGMSHPAVVQLRTRLQVTGDLQAYGGYPEVFDSYVEQAVKRAQERHG 152

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           + P+G +D +T+EA+NVP   R+RQL+ NL R++ L+      +YV+VNIPAA +EAV N
Sbjct: 153 IPPTGFLDQTTIEALNVPASARLRQLRTNLARLQSLVPGTPAGKYVIVNIPAAQIEAVNN 212

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +V  R   +VG+ DR +P+L+S I  I FN  WV+P ++++ D++   R     L    
Sbjct: 213 NQVISRHAGVVGKPDRPSPLLNSAIEEINFNKEWVVPPTVLKYDLVPKGRGGQDVLAKYK 272

Query: 271 IHMI-----DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           I         +KGK++   ++DW+S  P  + + Q PG  N +   KI F S    YMHD
Sbjct: 273 IDAYATHEDYQKGKKLDASQIDWSSDAPLRYFYVQAPGDENPLGFAKINFASPQGVYMHD 332

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   +F    R ++SGC+RV+NI  L  WLL+D   WS   +  + ++ +   V+L   
Sbjct: 333 TPGQSVFQRSFRADSSGCIRVQNIHQLVAWLLEDN-GWSVQQVLRMKQSGERLFVRLKKR 391

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           VP+++ YI+AWS  D  +QFR DIY  D V
Sbjct: 392 VPLYWTYITAWSTPDGTVQFRRDIYRKDGV 421


>gi|89068811|ref|ZP_01156194.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
 gi|89045581|gb|EAR51644.1| hypothetical protein OG2516_03630 [Oceanicola granulosus HTCC2516]
          Length = 550

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/402 (28%), Positives = 187/402 (46%), Gaps = 12/402 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE--SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
            L     L    +    +  +I     Y   +              + +  P  S E   
Sbjct: 137 FLAFARDLQSGVLDPGEVIPLIKREVLYMDPLEVLKGFADGNPMGYLRALAPT-SPEYQR 195

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
                +   + + + G  P +    L  G +   V  LR+RL   G L PS  +S+ FDA
Sbjct: 196 LLRARMEMQRQLNAGGYGPTVSA-SLERGATGEQVVALRDRLTAMGFLAPS--VSMEFDA 252

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +E+AV+ FQ+  GL   G+V  +TL+A+NVP++ R+R + V + R + +   + G R++
Sbjct: 253 ALEAAVRRFQVSVGLTADGVVGGATLDAINVPLEERLRMVLVAMERERWMNNLERGQRHI 312

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            VN+   +   V+ G V  R+  ++G    DRQTP     ++ ++ NP W +PRSI   +
Sbjct: 313 WVNLVDYTAAVVDEGHVTFRTKSVIGAGDADRQTPEFSDVMDHMVINPSWYVPRSITVNE 372

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTK 312
            +  LR++   +   ++ +ID  G+ V    V+++        +  RQ PG  NA+   K
Sbjct: 373 YLPSLRRNRNAVS--HLQVIDRNGRVVNRNSVNFSQYNARTFPYSMRQPPGSSNALGQVK 430

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +R N Y+HDTP   LF+  VR  + GC+R+ +  +    LL           +  +
Sbjct: 431 FMFPNRYNIYLHDTPSQHLFSETVRTFSHGCIRLDDPYEFAHALLAAQEDDPVGFFQTRL 490

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +   T V L T VPVH VY +A++  D ++ FR D YG D 
Sbjct: 491 DSGNETRVNLETPVPVHLVYRTAFTTADGVVNFRPDAYGRDG 532


>gi|218781317|ref|YP_002432635.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762701|gb|ACL05167.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 563

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 116/413 (28%), Positives = 191/413 (46%), Gaps = 13/413 (3%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNF--LARVDMGIDSDIPIISKETI 75
            L  G  L+   ++   ++ +       + +            V+  + S  P       
Sbjct: 149 FLIYGAHLLGGKVNPETIEPDWTAGKREADLPALLAEALKTNDVEKALKSLAPQ--DVAY 206

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VA 133
              +  +   +    +     +       LG        LR RL  +G L          
Sbjct: 207 RSMQDLLKQLRAAAPQPSVRLVQTAPSFKLGYRGPQTAALRARLAAAGFLGQDSEQDKEV 266

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           F+  +E+A+K FQ   GL+  G+   +TL A+N      I  ++ NL R + +  Q +G 
Sbjct: 267 FNESLEAALKKFQASWGLEADGVCGPATLHAVNRSEKDNIAAIRANLERWRWMP-QNLGD 325

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++LVNI    L  VENG+  L    IVG++ R+TP+   R+  ++ +PYW +P SI +K
Sbjct: 326 RHILVNIADFHLAVVENGEELLAMKAIVGKLYRKTPVFSGRLTYLVISPYWDVPPSIARK 385

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSP--EPPNFIFRQDPGKINAM 308
           D + L+++DP Y   N+  +    G   +E+    VDW +       +  RQ PG  NA+
Sbjct: 386 DKLPLMQKDPNYFTANHFLVYQGWGADSREIDPASVDWKALGPNNFPYRLRQKPGPGNAL 445

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +++N Y+HDTP   LF    R  +SGC+R+++ I L  +LLKD P W+R  I
Sbjct: 446 GRIKFMFPNKHNVYIHDTPSHDLFAKSQRNFSSGCIRIQDPIGLAEYLLKDAPGWNREAI 505

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           E+ V  +    V L+  +PVH +Y +A+      + FR+DIYG D   +  + 
Sbjct: 506 EDAVDNKIEKTVSLSRPIPVHIMYFTAFGDTRGAVHFRNDIYGRDARLLEALD 558


>gi|27377895|ref|NP_769424.1| hypothetical protein bll2784 [Bradyrhizobium japonicum USDA 110]
 gi|27351041|dbj|BAC48049.1| bll2784 [Bradyrhizobium japonicum USDA 110]
          Length = 449

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 3/363 (0%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRE 116
                  +  P   + +  + + A   Y D+  RGGWP +P      LG    +   LR+
Sbjct: 67  SAAALAMTHEPTYDEGSAQRIKDAALSYSDLAVRGGWPTIPADAKFALGVQGANDDLLRK 126

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RLI+SGDL      S AFD  +  AVK FQ RHGL P+GMV   TL AMNV V  RIRQL
Sbjct: 127 RLIVSGDLSAD-KASGAFDQDLADAVKRFQARHGLAPTGMVTPRTLAAMNVSVQKRIRQL 185

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           + +L R++  +    G RYV+VNIPAA  EAVEN  V  R  VIVG+ ++ +P L ++I 
Sbjct: 186 EASLQRLEN-MNFGFGQRYVVVNIPAAFAEAVENDVVVRRYRVIVGKTEKPSPTLTAQIT 244

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            ++ NP W +P SI + ++ A +R+DP YL   ++ ++D     +    VDW+    PNF
Sbjct: 245 SVVLNPTWTVPSSIAKTEISAHMRKDPTYLSRMHMEVLDAHDNPIDPHSVDWSGTHTPNF 304

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ  G  NA+ + KI+  +  + YMHDT +  LF++  RF++ GC RV N+ DL  WL
Sbjct: 305 TVRQQNGTFNALGAVKIDMPNAYSVYMHDTNQRNLFSDDYRFDSHGCSRVDNVRDLAAWL 364

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           LKD P WSR  I+  + T +   V +A +VPV + Y++AW  KD  +QFR+D+Y  D   
Sbjct: 365 LKDQPKWSRAAIDAEIATGQHLDVAMAKKVPVAWTYLTAWMTKDQTVQFRNDVYNQDEQL 424

Query: 417 VGI 419
           +  
Sbjct: 425 LEA 427


>gi|113970655|ref|YP_734448.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885339|gb|ABI39391.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 560

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 213/438 (48%), Gaps = 25/438 (5%)

Query: 14  FFVYL---ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRF-----DNFLARVDMGID 64
           F V L   I+   + L+   ++ S+L +  N +  H   +              V   I 
Sbjct: 120 FEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDETHLDFDTTLKQLEEHIKAHTVADAIA 179

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGD 123
              P I+     Q ++ +A Y+D+++R  +  +P    +  G++S SVQ +  RL   G 
Sbjct: 180 GLAPKIAP--YQQLKQYLAQYKDLVTRYPFSPIPYTEVIKPGSTSPSVQGIATRLTELGY 237

Query: 124 LDPSKGLSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L  S              +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP   R+ Q
Sbjct: 238 LAASAPADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQRVEQ 297

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +++NL R + L    +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S++
Sbjct: 298 IRINLERARWL-SANLPANYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKSKL 356

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EP 293
             ++ NP W +PRSI   +++  LR+DP YL+  +  +++  G  V    +DW+S   + 
Sbjct: 357 KYVVVNPTWTVPRSI-STEIINHLRKDPDYLQKKHFKVVEGSGTPVDASGIDWHSMTRKN 415

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             + F Q+PG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + L 
Sbjct: 416 FPYWFVQEPGEDNSLGVVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLVLA 475

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL     WS   +   +   KT  + L   + +  +Y +    KD  I+F +D+Y  D
Sbjct: 476 DKLLSANANWSSNTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYNDVYKRD 534

Query: 414 NVHVGIIPLPEDHPIDSD 431
            V +  +  P    + +D
Sbjct: 535 PVLIEALNRPTYEGVLAD 552


>gi|283833784|ref|ZP_06353525.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
 gi|291070449|gb|EFE08558.1| putative periplasmic protein [Citrobacter youngae ATCC 29220]
          Length = 583

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 185/408 (45%), Gaps = 18/408 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S    ++     S++N  +      ++   I    P   +   
Sbjct: 165 YLHFIANIPVKGNHWLYSNKPYVLATPPISVINQWQVALDNGQLTSFIAGLAPQHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           A   +++     +     WP+L     L  G  S  +  LRE L  +G L+     +   
Sbjct: 223 AAMHESLLKL--VSDTRPWPQLTSTSTLRPGEWSNDIPALREILRRTGMLESVVSTAAKE 280

Query: 132 --VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
              A+ + +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++ L   
Sbjct: 281 GRSAYGSELVEAVKRFQTWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPGD 340

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 341 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 398

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++        +   +VDW +    N  FR  Q PG  
Sbjct: 399 LARKDILPKVWNDPGYLERHGYTVMRGWNSKETIDPWQVDWATITASNLPFRFQQAPGAR 458

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 459 NSLGRYKFNMPSSDAIYLHDTPNHNLFQKDTRALSSGCVRVNKASELANMLLQDA-GWND 517

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 518 TRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRTQYRTDIYNYD 565


>gi|227111943|ref|ZP_03825599.1| hypothetical protein PcarbP_03208 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 578

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 39/430 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     ++V+  +           + S  P  S+   
Sbjct: 139 YLQFVSGVERSGNDWLYSSVPYRLQSPTLNVVSQWQQAVKSGTSAAYVVSLAPQHSQ--Y 196

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPS------- 127
           A+  +A+     +     WP L     L     S  +  LRE L  +G L  +       
Sbjct: 197 AKMHEALKTM--LTDNRPWPSLNLAESLRPEQQSRELAVLREILQRTGMLSSTESITLFN 254

Query: 128 ------------------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                               +   +   +  AVK FQ   GL+  G++   T + +NV  
Sbjct: 255 ENTAATTVSTGQAPLVEGGAIDDRYTGELVDAVKRFQHWQGLEDDGVIGKRTRDWLNVSP 314

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +R   L +N+ R++ L +       ++VNIP  SL   ++G   L S VIVG+  R+TP
Sbjct: 315 QMRATLLALNIQRLRLLPDNV--HTGIMVNIPNYSLIYYQDGAERLSSRVIVGQPKRKTP 372

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEV 286
           ++ S +  ++ NP W +P ++ ++D++  + +DP YL+ +   ++    +    +    +
Sbjct: 373 LMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEAIDPSMI 432

Query: 287 DWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           DW         +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +SGCV
Sbjct: 433 DWPMVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSGCV 492

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV    +L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D   Q
Sbjct: 493 RVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGRPQ 551

Query: 405 FRDDIYGLDN 414
           FR DIY  D+
Sbjct: 552 FRTDIYNYDD 561


>gi|156974988|ref|YP_001445895.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
 gi|156526582|gb|ABU71668.1| hypothetical protein VIBHAR_02710 [Vibrio harveyi ATCC BAA-1116]
          Length = 530

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 32/396 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LSL+   I    LD+ + +      +++ F+   + +      + P+  ++      + 
Sbjct: 159 TLSLLSNEITVGKLDQFLTDLRSPLQMDESFNTAFSSLSTYAKFEFPLYQQD------QR 212

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A   D                L + S  + R++   +  G LD        +D  +E A
Sbjct: 213 LARVGD---------------ELFDKSSLIARMQIVGVEVGHLDTET---TLYDENLELA 254

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           V  FQ  HGL   G++  +TL  +N     R+  L +N  R +   +++     V VN+P
Sbjct: 255 VMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALNAERSRIWSKER--DNVVFVNVP 312

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +    +G+    S V+VG+  R+TPI+   ++ ++ NP W +P  I+ KD++  +++
Sbjct: 313 GYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVILNPTWNVPWKIMVKDIIPKVKR 372

Query: 262 DPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYS 317
           +P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    +
Sbjct: 373 NPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQSSGSHNALGLYKFNMPN 432

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP   LFN   R  +SGCVRV +   L   L K      R   +     R  
Sbjct: 433 PQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRQSGRRSN 492

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 493 TSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 527


>gi|226330682|ref|ZP_03806200.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
 gi|225201477|gb|EEG83831.1| hypothetical protein PROPEN_04602 [Proteus penneri ATCC 35198]
          Length = 575

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 188/420 (44%), Gaps = 19/420 (4%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFDNFLARVDMGIDSDIPIISK 72
           F  Y+     ++     +      ++++     S++  + +     +   + S  P    
Sbjct: 154 FLGYISFVEQVNKSGTSLLYRSATQVLSAPSDSSVIELQQNIQNNTLGSFVISYAPSHP- 212

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
              A  ++ +     + S   WPE+     L    SS  V  LR+ L     +       
Sbjct: 213 -YYALMKEELRK--QLHSSVVWPEMKGTTSLKPNQSSQEVVPLRQILRNLKLIPELAVNE 269

Query: 132 V-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +DA + +AVKLFQ  HGL+P G++   T   +N+    R   + +N+ R++  
Sbjct: 270 QEIATTVYDASLVAAVKLFQTAHGLEPDGIIGRQTRTWLNITPAQRASIMALNIQRLRLT 329

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +G   + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +N ++ NP W +
Sbjct: 330 PA--IGDTGIWVNIPDFSLYFYANNELILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNV 387

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QD 301
           P S+ +KD++   + DP Y       +    G     +   ++DW +    NF +R  Q 
Sbjct: 388 PTSMTRKDIVPRGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWQNVSANNFPYRIWQA 447

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    + +  Y+HDTP   LF+  +R  +SGC+RV    +L   LL D  
Sbjct: 448 PGPTNSLGRYKFNMPNSDAIYLHDTPNHSLFSKNMRAISSGCIRVNKASELASILLGDA- 506

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W +  I+  +K   T    +   +PV+  Y +AW  +++  Q+R DIYG D       P
Sbjct: 507 GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAQENAPQYRADIYGYDKSISNAEP 566


>gi|261339259|ref|ZP_05967117.1| hypothetical protein ENTCAN_05495 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319116|gb|EFC58054.1| putative periplasmic protein [Enterobacter cancerogenus ATCC 35316]
          Length = 607

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 124/448 (27%), Positives = 193/448 (43%), Gaps = 43/448 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+ +       S     +     S++N  +       +   I S  P   +   
Sbjct: 165 YLQFVAGIPVNGNRWLYSQKPYKLATPALSVINQWQLSLDNGDLPRFIASLAPAHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
           A   +++     +     WP+L     L  G  S  V  LRE L  SG LD    +    
Sbjct: 223 ATMHQSLLAL--VADSRPWPQLRATATLRPGQWSSDVPALREILSRSGILDGGPNIALPG 280

Query: 131 -------------------------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                      A+D  + +AVK FQ   GL   G++  ST + +
Sbjct: 281 DDSQNVVVSPSAPVKEKKAVGLNNKPAAYDRELVAAVKQFQAAQGLGADGVIGQSTRDWL 340

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV    R   L +N+ R++ L         ++VNIPA SL   ++G   L S VIVGR D
Sbjct: 341 NVSPAQRAGVLALNIQRLRLLPGTL--STGIMVNIPAYSLVYYQDGNEVLASRVIVGRPD 398

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFV 283
           R+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +  +  
Sbjct: 399 RKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDP 458

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +S
Sbjct: 459 YMVDWSTITASNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQKDTRALSS 518

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D 
Sbjct: 519 GCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRHNIPVNLYYLTAFVGADG 577

Query: 402 IIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             Q+R DIY  D     G   LP+   +
Sbjct: 578 RTQYRTDIYNYDLPARSGAQILPKAEQL 605


>gi|153835596|ref|ZP_01988263.1| cell wall degradation protein [Vibrio harveyi HY01]
 gi|148867813|gb|EDL67053.1| cell wall degradation protein [Vibrio harveyi HY01]
          Length = 515

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 101/396 (25%), Positives = 175/396 (44%), Gaps = 32/396 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LSL+   I    LD+ + +      +++ F+   + +      + P+  ++      + 
Sbjct: 144 TLSLLSNEITVGKLDQFLTDLRSPLQMDESFNTAFSSLSTYAKFEFPLYQQD------QR 197

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A   D                L + S  + R++   +  G LD        +D  +E A
Sbjct: 198 LARVGD---------------ELFDKSSLIARMQIVGVEVGHLDTET---TLYDENLELA 239

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           V  FQ  HGL   G++  +TL  +N     R+  L +N  R +   +++     V VN+P
Sbjct: 240 VMEFQRIHGLKQDGIIGPNTLRWINFSPQQRLHSLALNAERSRIWSKER--DNVVFVNVP 297

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +    +G+    S V+VG+  R+TPI+   ++ ++ NP W +P  I+ KD++  +++
Sbjct: 298 GYEVTYWHDGQPLFESKVVVGKASRKTPIMTGTMDSVILNPTWNVPWKIMVKDIIPKVKR 357

Query: 262 DPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYS 317
           +P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    +
Sbjct: 358 NPMYLMEHNIQIIRSWTSREIIDPTTINWATVNPRTFPYRMRQSSGSHNALGLYKFNMPN 417

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP   LFN   R  +SGCVRV +   L   L K      R   +     R  
Sbjct: 418 PQAIYLHDTPSKNLFNQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRQSGRRSN 477

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 478 TSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 512


>gi|90022535|ref|YP_528362.1| hypothetical protein Sde_2893 [Saccharophagus degradans 2-40]
 gi|89952135|gb|ABD82150.1| Peptidoglycan-binding domain 1 [Saccharophagus degradans 2-40]
          Length = 563

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 122/417 (29%), Positives = 200/417 (47%), Gaps = 16/417 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS------ 71
           L+L      + + I A  +D     +      +  D     +   + S++PI        
Sbjct: 150 LVLTDAFLFLAQHILAGKVDPETLTNEWKPAKEVVDARA--LLTKVASNVPIADIVQSLR 207

Query: 72  --KETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK 128
             +   A+  K +A+  +      W  L + P +  G +   +  + ERL   GDL  S+
Sbjct: 208 PRQPRYARLVKTLAWL-NSTQAPDWEPLALSPAIKKGMADTRLSPIAERLRFWGDLSESE 266

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                ++  +  AV  FQ RHGL+P G+V  +TL A+NV    R   + VNL R + L +
Sbjct: 267 ETFTHYEGELMEAVTRFQRRHGLEPDGVVGKNTLLALNVSPVQRANDVVVNLERWRWL-D 325

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           Q MG  +++VNI    L   ++ ++ ++  VIVGR  R+TP+   +I  ++FNP W +P+
Sbjct: 326 QNMGDYFIVVNIANFDLRVYKSNELVMQKPVIVGRNYRKTPVFSDKIRFLVFNPTWTVPQ 385

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSP-EPPNFIFRQDPGKIN 306
            +  +D +  +++D  YL+     +    +   V   +V+W+   +   +   Q PG +N
Sbjct: 386 KLAVQDKLPEIKKDISYLEKYGFTLYALGENTVVNPADVEWDKLHKRFPYRMVQAPGPLN 445

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F +  + Y+HDTP   LF+   R  +SGC+RV + I+L   LL+        
Sbjct: 446 ALGQVKFMFPNAYDVYLHDTPSRELFSKTERAFSSGCIRVSDPIELASKLLEPN-GMGID 504

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
            I EV+ + KTT V L T VPVH  Y +AW      +QFR+DIY  D      + LP
Sbjct: 505 QINEVLSSAKTTTVNLKTPVPVHIEYWTAWVDSSGKLQFRNDIYERDKPLFSALTLP 561


>gi|146311101|ref|YP_001176175.1| hypothetical protein Ent638_1444 [Enterobacter sp. 638]
 gi|145317977|gb|ABP60124.1| Peptidoglycan-binding domain 1 protein [Enterobacter sp. 638]
          Length = 607

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 127/448 (28%), Positives = 196/448 (43%), Gaps = 43/448 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+ +       S     +     S++N  +       +   I S  P   +   
Sbjct: 165 YLQFIAGIPVNGNRWLYSDKAYKLATPALSVINQWQLALDQGTLPRFIASLAPAHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGD----------- 123
           A   +++     +     WP+L     L  G  S  V  LRE L+ SG            
Sbjct: 223 ATMHQSLLKL--VADTRPWPQLRGTATLRPGQWSSDVPALREILLRSGATGAEPKIALPG 280

Query: 124 -------LDPSKGLSVA-----------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  + PS                 +D  + +AVK FQM  GL   G++  ST + +
Sbjct: 281 DDPQGVVVSPSAPAPEVKAALPTGKPAAYDRELVAAVKTFQMTQGLGADGVIGPSTRDWL 340

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV    R   L +N+ R++ L         ++VNIPA SL   +NG   L S VIVGR D
Sbjct: 341 NVSPAQRAGVLALNIQRLRLLPGTL--STGIMVNIPAYSLVYYQNGSEVLASRVIVGRPD 398

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFV 283
           R+TP++ S +N ++ NP W +P ++ +KD++  L  DP YL+ +   ++      + +  
Sbjct: 399 RKTPMMSSALNNVVVNPPWNVPPTLARKDILPKLWDDPGYLERHGYTVMRGWNSSQAIDP 458

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            +VDW +  P N  FR  Q PG+ N++   K    S +  Y+HDTP   LF    R  +S
Sbjct: 459 YQVDWATITPSNLPFRFQQAPGERNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDARALSS 518

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL D   W+   I + +K   T  V +   +PV+  Y++A+  +D 
Sbjct: 519 GCVRVNKASELANMLLGDA-GWNDTRISDTLKEGNTRYVNIRHNIPVNLYYLTAFVGEDG 577

Query: 402 IIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             Q+R DIY  D     G   LP+   +
Sbjct: 578 RTQYRTDIYNYDLTARSGAQILPKAEQL 605


>gi|53804877|ref|YP_113480.1| hypothetical protein MCA1003 [Methylococcus capsulatus str. Bath]
 gi|53758638|gb|AAU92929.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 554

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 114/426 (26%), Positives = 197/426 (46%), Gaps = 23/426 (5%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSI------VNDRFDNFLARVDMGIDSDIPIISK 72
           ++  G +L    +H       ++ +   +       +   D +      G++S +P+   
Sbjct: 134 LMRYGSNLARGRVHPRAAGFALDVASKRLDLPALVQHLARDPWPCEAIAGLESKLPL--- 190

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDL--DPSKG 129
                 + A+  Y+ +        L     L  G+    V  LR+RL   G L  + S  
Sbjct: 191 --YRNLKAALPRYRGLAENNDVSALALPPKLSPGDRHGEVPALRKRLAALGFLWQESSSK 248

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AV  FQ RHGL P G++   TL A+NVP   R+RQ+++ L R++ L  +
Sbjct: 249 EPEVYAGDLVEAVARFQERHGLAPDGVIGKGTLAALNVPPAARLRQIRLGLERLRWLP-E 307

Query: 190 KMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWV 245
           +    ++LVNIP+  L     +  +  +   V+VGR      TP+ HS +  ++F PYW 
Sbjct: 308 RFEGPFILVNIPSFRLYGYGQDPERPEVSMNVVVGRSSGGHNTPVFHSDMTYVVFRPYWN 367

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFRQDP 302
           +PR+I  K+M+  + +DP YL  +N+ ++   G   +               +   RQ P
Sbjct: 368 LPRAITVKEMLPGILRDPGYLARHNLELVPSFGNGSQVYEPSLESLEMLSAGSLKLRQRP 427

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT-P 361
           G  NA+   K  F + +N Y+H TP   LF    R  + GC+RV++ + L  ++LK    
Sbjct: 428 GPKNALGLVKFAFPNNDNIYLHGTPSVNLFQRARRDFSHGCIRVQDPVGLAEFVLKREGE 487

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           TW++  IEE +   ++  V L   +PV+  Y +  +  D  ++F +DIYGLD V   ++ 
Sbjct: 488 TWTQERIEEAMNGAQSRTVTLKQPLPVYIYYSTVLAEPDGTVRFFEDIYGLDRVLEQLLE 547

Query: 422 LPEDHP 427
               +P
Sbjct: 548 KGFPYP 553


>gi|325981933|ref|YP_004294335.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325531452|gb|ADZ26173.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 543

 Score =  365 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 111/409 (27%), Positives = 203/409 (49%), Gaps = 18/409 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L +   L      A+  D   +       +       A     ++  +  +S +T    
Sbjct: 130 VLKLATDLSRGRFSATATDPDWHIPRA-DFDAVAFLQAAIYAGHLEDSLQKLSPQTLNYQ 188

Query: 77  QTEKAIAFYQDILSRGG-WPELPIRP-LHLGNSSVSVQRLRERLIIS----GDLDPS--K 128
             ++ +A YQ +L     W  +P  P L  G++  S+  +R+R+  +    G L+ +   
Sbjct: 189 LLKRTLAHYQILLKNTPEWIRIPSSPSLRPGDTYPSIPLIRQRIAQAYAADGLLEFNLIP 248

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +  +D  + +A+K FQ +HGL+  G++  +T+ A+N+P++ +IRQL++N+ R++ L  
Sbjct: 249 NANQLYDTELVAAIKAFQAQHGLNTDGIIGKNTINALNIPLEWKIRQLRINMERLRWLP- 307

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G R++LVN     L A+EN +  L   +IVGR  R TP  +  ++ ++ NPYW +P 
Sbjct: 308 RNLGQRHLLVNTAGFYLTAIENDEPVLNMRIIVGRDYRSTPSFNGTLSHMVLNPYWNVPA 367

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPE-PPNFIFRQDPGK 304
           SI +KD++   +QDP Y       +    +   + +    +DW+  +    +  RQDPG 
Sbjct: 368 SIARKDLLPKQQQDPTYFTTAGFKVYPAQERGAQAIDPGMIDWHELKQRFPYFLRQDPGT 427

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F +  + Y+HDTP   LF   +R  +SGC+R+    +L  + L + P+  
Sbjct: 428 HNALGKIKFMFSNPFSIYLHDTPSKSLFRKDIRTFSSGCIRLEKPFELAAFAL-NQPSLP 486

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                  +++ KT    L   +P++ VYI+AW+ +   + F  DIY  D
Sbjct: 487 -EKFSADLESDKTITTHLPKPLPIYLVYITAWADEHHKVYFYPDIYDRD 534


>gi|156934583|ref|YP_001438499.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532837|gb|ABU77663.1| hypothetical protein ESA_02417 [Cronobacter sakazakii ATCC BAA-894]
          Length = 664

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 119/418 (28%), Positives = 184/418 (44%), Gaps = 45/418 (10%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLG 105
                 DN    V   + S  P   +   A    ++     +     WP++  +  L  G
Sbjct: 254 QWQVALDN--GSVPAFVRSLAPAHPQ--YAAMHASLLQL--VADTRPWPQMTGKEKLRPG 307

Query: 106 NSSVSVQRLRERLIISGDLD-----------------------------PSKGLSVAFDA 136
             S  +  L+E L  +G LD                               K     +D 
Sbjct: 308 QWSSDIPALKEILQRTGMLDGGPDIALPGDNNGVVSPSAAPQTASQTRSTPKPTRAVYDK 367

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            + +AVK FQ   GL   G++  ST + +NV    R   L +N+ R++ L  +      +
Sbjct: 368 DLVAAVKRFQKWQGLGADGVIGESTRDWLNVTPAQRAALLALNIQRLRLLPGKL--STGI 425

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VNIP  SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++
Sbjct: 426 MVNIPEYSLVYYQNGNQVLASRVIVGRPDRKTPLMSSALNNVVVNPPWNVPPTLARKDIL 485

Query: 257 ALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QDPGKINAMAST 311
             +  DP YL+ +   +++  G     V    VDW +  P N  FR  Q PG  N++   
Sbjct: 486 PKVWNDPGYLESHGYTVLNGWGSNADVVDPWMVDWATITPSNLPFRFQQAPGAHNSLGRY 545

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+   I + 
Sbjct: 546 KFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDSRISQT 604

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
           +K   T  V +   +PV+  Y++A+  +D   Q+R DIY  D     G   LP+   +
Sbjct: 605 LKEGNTRYVNIPQTIPVNLYYLTAFIGEDGRPQYRTDIYNYDHTARSGAQILPKVEQL 662


>gi|50121470|ref|YP_050637.1| hypothetical protein ECA2546 [Pectobacterium atrosepticum SCRI1043]
 gi|49611996|emb|CAG75445.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 580

 Score =  365 bits (937), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 183/432 (42%), Gaps = 41/432 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +IV   +    L      + S  P  S+   
Sbjct: 139 YLQFVSGVERSGNDWLYSNVPYRLQSPAANIVAQWQQAVKLGTSAAYVLSLAPQHSQ--Y 196

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
           A+  +A+     +     WP L     L     S  +  LRE L  +G L  ++ +    
Sbjct: 197 AKMHEALKTM--LTDNRPWPSLNLTESLRPEQQSQGLTVLREILQRTGMLSSTESITLFN 254

Query: 131 -----------------------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                                     +   +  AVK FQ   GL+  G++   T + +NV
Sbjct: 255 ENTAATTTSLTGQAPVVDGTTNADDRYTGELVDAVKRFQHWQGLEDDGVIGKRTRDWLNV 314

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
              +R   L +N+ R++ L         ++VNIP  SL   ++G   L S VIVG+  R+
Sbjct: 315 SPQMRATLLALNIQRLRLLPGNV--HTGIMVNIPNYSLIYYQDGAERLSSRVIVGQPKRK 372

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVE 284
           TP++ S +  ++ NP W +P ++I++D++  + +DP YL  +   ++    +    +   
Sbjct: 373 TPLMSSSLYNVVVNPPWNVPTTLIRQDIIPKVVRDPGYLARHGYTVLSGWSQDAEVIDPS 432

Query: 285 EVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            +DW    P    +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +SG
Sbjct: 433 MIDWQVVSPERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALSSG 492

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV    +L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D  
Sbjct: 493 CVRVNKASELASMLLQDA-GWNNNRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAEDGR 551

Query: 403 IQFRDDIYGLDN 414
            QFR DIY  D+
Sbjct: 552 PQFRTDIYNYDD 563


>gi|83311306|ref|YP_421570.1| hypothetical protein amb2207 [Magnetospirillum magneticum AMB-1]
 gi|82946147|dbj|BAE51011.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
           magneticum AMB-1]
          Length = 535

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 123/419 (29%), Positives = 193/419 (46%), Gaps = 12/419 (2%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--I 75
            +L  G  L    +  +              +             +   +  IS +    
Sbjct: 115 TLLRFGRDLAIGGVLPARNVGGFGAETRGEFDGARFLKALAEGKPLAEQMEAISPQYVGY 174

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            +    +   + I + GGWP +P    L  G +   V  LR RLI SGDL         +
Sbjct: 175 IRLRDGLERARAIAAAGGWPTIPDGAKLVPGETDERVPLLRRRLIASGDLADGLAEGKIY 234

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           DA +  AVK FQ RHGLDP   V   TL  +NVP D R+RQ+  NL R + +  +  G  
Sbjct: 235 DATLAEAVKRFQARHGLDPDATVGGKTLAHLNVPADARVRQITANLERWRWMP-RSFGRH 293

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V VNI A  +E VE+G V +   V+VG     TP +++ ++ ++ NP W +P SI  K+
Sbjct: 294 HVAVNIAAQQMEVVEDGSVAMVMRVVVGDTKHPTPSMNTTMSSVVLNPAWRVPTSIANKE 353

Query: 255 MMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMAST 311
           ++  LR+DP YL  + + ++D      E   + VDWN+  +   +  RQ PG  NA+   
Sbjct: 354 ILPKLRKDPNYLTSSKLQIVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNALGQL 413

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K      ++ YMHDTP    F+   R  + GCVR+   ++L   +L     W      ++
Sbjct: 414 KFNLTDSDDIYMHDTPNRRAFSRSYRALSHGCVRLERPVELGELMLG--ARWQGKLAHDI 471

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII---PLPEDHP 427
              R T  + L   +PV+ +Y +AW+ ++  + FRDD+YG D   +  +    +P   P
Sbjct: 472 NANRSTRTLMLERTIPVYLMYWTAWADENGNLHFRDDLYGHDRRLMTALERARIPAQRP 530


>gi|24373464|ref|NP_717507.1| hypothetical protein SO_1899 [Shewanella oneidensis MR-1]
 gi|24347755|gb|AAN54951.1|AE015633_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 571

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 111/441 (25%), Positives = 211/441 (47%), Gaps = 26/441 (5%)

Query: 12  YCFFVYL---ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRF-----DNFLARVDMG 62
             F V L   I+   + L+   ++ S+L +  N +  H   +              V   
Sbjct: 128 SIFEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDEAHLDFDTTLKQLEEHIKAHTVAEA 187

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIIS 121
           I+   P I+     Q ++ +A Y+D+ +R  +  +P    +  G +S S++ +  RL   
Sbjct: 188 INGLAPKITP--YHQLKQYLAHYKDLAARYPFTTIPYTEVIKPGTTSPSIKGIAARLKEQ 245

Query: 122 GDLDPSKGLSV---------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           G LD +  +            +D  +E+A++ FQ  H L   G++ + T+ A+NVP   R
Sbjct: 246 GYLDANATVQDATLVANAPLLYDNILEAAIRQFQADHSLKADGVIGAGTMAALNVPYAQR 305

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + Q+++NL R + L    +   Y++VN+    L   ++  +  R+ +I+G++D +TP+  
Sbjct: 306 VEQIRINLERARWL-SANLSANYLIVNLAGYELLLFKDNNLSWRTDIIIGKIDSKTPLFK 364

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S++  ++ NP W +P SI   +++   R+DP YL   +  +++  G  V    +DW+S  
Sbjct: 365 SKLKYVVVNPTWTVPNSI-STEIINHQRKDPDYLHKKHFKVVESSGTPVDASGIDWHSMT 423

Query: 292 -EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +   + F Q+PG  N++   K  F ++ + Y+HDTP   LF+   R  + GC+RV++ +
Sbjct: 424 RKNFPYWFVQEPGADNSLGLVKFIFPNQYSIYLHDTPSKNLFDKTDRAFSHGCIRVKDPL 483

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LL     WS   +   +   KT  + L   + +  +Y +A   K+  I+F +D+Y
Sbjct: 484 VLADKLLSANANWSSETLNNKLAEGKTENLFLDEPLDILIMYWTATI-KNGKIKFYNDVY 542

Query: 411 GLDNVHVGIIPLPEDHPIDSD 431
             D V +  +  P    + +D
Sbjct: 543 TRDPVLIEALNRPTYEGVLAD 563


>gi|312144057|ref|YP_003995503.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
 gi|311904708|gb|ADQ15149.1| ErfK/YbiS/YcfS/YnhG family protein [Halanaerobium sp.
           'sapolanicus']
          Length = 545

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 13/409 (3%)

Query: 19  ILPMGLSLVEKPIHASVL-DEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETIA 76
              +    +   +   V+ ++          ++ F+   +  + + + S +P    +   
Sbjct: 134 YFSLATDYLSGKLDPEVILEDGDFSRNRIDNSEIFEGLKSENITVNLQSKLP--ESDYYQ 191

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAF- 134
           + +  +  Y+D      WPE+    L   G   + V +L + LI  G L         + 
Sbjct: 192 RLKHKLYIYRDSGEVEQWPEVDSGSLLAQGAEGIRVSQLSDNLINRGYLSEENIDDKYYF 251

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
            + + +AVK FQ  HGL   G+V   TLEA+N+P + RI+Q+ +N+ R + L +  +G R
Sbjct: 252 GSQLNAAVKEFQFNHGLSDDGIVGPQTLEALNIPYEKRIKQIMINMERWRWLPK-DLGER 310

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y+ VNI   SL   E+  + +    IVG   R TP+    I  ++FNPYW +P+SI  +D
Sbjct: 311 YIYVNISDYSLNVYEDNNIIMNMKTIVGNEQRSTPVFSDEIRYLVFNPYWYVPKSIAVED 370

Query: 255 MMALLRQDPQYLKDNNIHMIDEKG----KEVFVEEVDWNSPE--PPNFIFRQDPGKINAM 308
           ++  ++ D  YL +NN  +         +++   E++W + +    NF+ RQ+PG  NA+
Sbjct: 371 ILPSVKNDIDYLDENNYKIFAYNNNNTLRKIDASEIEWENIDEDNFNFLVRQEPGDENAL 430

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +R N Y+HDTP   LF+   R  +SGC+R+   I+L ++LLKD   W R  +
Sbjct: 431 GRVKFMFPNRFNVYLHDTPSKYLFDETERGFSSGCIRIEKPIELALYLLKDQEEWDRETL 490

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           EE++K      + L   +P++  Y +AW      + FR DIY  D + +
Sbjct: 491 EEIMKEDNEKTIYLDETIPIYLQYNTAWVDNFGNLNFRKDIYNRDKILI 539


>gi|163803521|ref|ZP_02197391.1| GTP cyclohydrolase II [Vibrio sp. AND4]
 gi|159172697|gb|EDP57548.1| GTP cyclohydrolase II [Vibrio sp. AND4]
          Length = 521

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 103/397 (25%), Positives = 172/397 (43%), Gaps = 34/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LSL+   I    LD+ +        + D F+   A +        P   ++      K 
Sbjct: 150 TLSLLSNEITVGKLDQFLAGLRSPLQMEDSFNTAFASLSTYAKFKFPRYQQD------KR 203

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
           +A                    +G++      L  R+ I G ++      S  +D  +E 
Sbjct: 204 LAR-------------------VGDALFDKASLIARMQIVGVEVGHLDTESRLYDDNLEL 244

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV  FQ  HGL   G++  +TL  +N     R+  L +N  R +   +++     V VN+
Sbjct: 245 AVMEFQRIHGLKQDGVIGPNTLRWVNFSPQQRLHSLALNAERSRIWSKKR--DNVVFVNV 302

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VG+  R+TPI+   ++ ++ NP W +P  I+ KD++  ++
Sbjct: 303 PGYEVTYWHDGRPLFESKVVVGKASRKTPIMTGTMDSVILNPTWNVPWKIMVKDIIPKVK 362

Query: 261 QDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I        +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 363 RNPMYLIEHNIQIIRSWSSREVIDPTTINWATVNPKTFPYRMRQSSGSHNALGLYKFNMP 422

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LFN   R  +SGCVRV +   L   L K     +R   +     R 
Sbjct: 423 NPQAIYLHDTPSKNLFNEDRRAFSSGCVRVEHADQLAELLFKTQGLEARLERKRQSGRRS 482

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 483 NTSVPLTERIQVHIIYQTAWL-EEGTLYYRDDIYQYD 518


>gi|224369240|ref|YP_002603404.1| hypothetical protein HRM2_21420 [Desulfobacterium autotrophicum
           HRM2]
 gi|223691957|gb|ACN15240.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 549

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 108/379 (28%), Positives = 177/379 (46%), Gaps = 16/379 (4%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQ 112
                +D    S  P   +       K +  Y  +   G W +L     +  G+    + 
Sbjct: 172 LATENLDEFFQSLPPQHHQ--YRGLRKGLLHYGLLKYSGKWKDLSGTESIRPGDEDERIV 229

Query: 113 RLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +R+R+ +      ++  S   S  +D  +   V LFQ  HGL   G++  +T++ +N  
Sbjct: 230 EIRKRIALLENDNKEISKSAEPS-VYDHELLKKVVLFQQTHGLVQDGIIGRNTIQELNKS 288

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            + R+ Q+++N+ R +   +  +G +Y+LVNI   SL A + G++     VIVG+   QT
Sbjct: 289 PEDRVDQIKINMARWRWQ-DHGLGDKYILVNIANYSLYACKTGELKFSMPVIVGKFQHQT 347

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEE 285
           P+   +I  +  NPYW +P SI   + +  LR++P YL + NI +       G E+    
Sbjct: 348 PVFSDKIKYLELNPYWNVPSSIAVNEDLPGLRKNPSYLVEKNIRLFSNWQKDGVEIDSTA 407

Query: 286 VDWNSPEPP---NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
           ++W    P     F  RQDPG  NA+   K  F +  + Y+HD+P   LF+   R  + G
Sbjct: 408 INWKRVTPSEMARFKLRQDPGPTNALGRVKFVFPNHYSVYLHDSPAKRLFSEQKRSFSHG 467

Query: 343 CVRVRNIIDLDVWLLKDT-PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           C+RV     L V+LL +    W+   I +++   K   +K+   VPVH  Y +AW  KD 
Sbjct: 468 CIRVSEPEKLAVFLLDEEGSEWNIEQIHDLISQGKRKVLKIRLPVPVHITYQTAWVDKDD 527

Query: 402 IIQFRDDIYGLDNVHVGII 420
            I F  D+YG D      +
Sbjct: 528 EILFNGDVYGRDEKLYKAL 546


>gi|119383985|ref|YP_915041.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119373752|gb|ABL69345.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 535

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 172/412 (41%), Gaps = 9/412 (2%)

Query: 15  FVYLILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISK 72
           F          +    +    ++  I  E       D    F A  D + + + +P    
Sbjct: 115 FARAFADWSRDVSGGILDPRRVEPGIKREVQRPRTGDLLRAFAAAADPVAMLAALPPQDA 174

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
                  +A+A    +++ G  P +       G S  +V  LR RL   G      G  +
Sbjct: 175 R-YEALRQALARQSQLVAPGDAPRVAEGLWREGTSDPAVAALRVRLASVGFAAAPMGSPL 233

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  +  AV  +Q   GL   G+    T+  +N         + V L R++ +    + 
Sbjct: 234 TYDGALAQAVAAYQKAAGLPADGVAGPRTVARLNRGTGPEAEAILVALERMRWMRGHDLN 293

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSI 250
            R+V VN+P  +    ENG+    + V++G+ +R+  TP     +  ++ NP W +PRSI
Sbjct: 294 ARHVWVNLPEFNARIYENGREVFETRVVIGKANREFETPEFSETMKYMVVNPRWNVPRSI 353

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAM 308
             K+ +  L+ +   +   ++ ++D  G  +  + +D+         +  RQ P   NA+
Sbjct: 354 TVKEYLPRLQANRHAV--GHLDVVDGAGNVIARDRIDFRKYSAKTFPYRMRQKPSDDNAL 411

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F +  N Y+HDTP   LFN   R  + GC+RV   +DL   LLK          
Sbjct: 412 GQVKFMFPNPWNIYLHDTPTKHLFNQSSRAYSHGCIRVGRPVDLAHELLKGQVESPEAVF 471

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + +K+ + T + L   VPVH VY +A+  +   I+   DIYG D +    +
Sbjct: 472 SKALKSGRETYLNLRPPVPVHLVYFTAFPDESGQIRRFPDIYGRDALVHAAL 523


>gi|94312745|ref|YP_585954.1| hypothetical protein Rmet_3815 [Cupriavidus metallidurans CH34]
 gi|93356597|gb|ABF10685.1| conserved hypothetical protein (peptidoglycan-binding domain)
           [Cupriavidus metallidurans CH34]
          Length = 540

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 104/424 (24%), Positives = 180/424 (42%), Gaps = 21/424 (4%)

Query: 20  LPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDN--------FLARVDMGIDSDIPII 70
           L + +      +H   +D   I+ ++       FD            R+   I    P  
Sbjct: 106 LTVAMRQYLSDLHKGRIDPRQIHVNFSVADETPFDPDSYLHAAVAANRLPAAIHEAAPSF 165

Query: 71  SKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
                     A++ Y+ + ++  W    P  P   L +G     + ++ +RL   GDL  
Sbjct: 166 P--LYPTLRDALSRYRALATQPLWNTPLPTPPGNKLAIGQPYDGLAQMAQRLEALGDLPQ 223

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
              +   ++  + +AV+ FQ RHGLD  G++   TL  +N     R++Q+ + + R++  
Sbjct: 224 GTPVPKKYEGALVTAVESFQKRHGLDADGVIGQGTLAQLNTTPSERVKQIALTMERLRWT 283

Query: 187 LEQKMGLRYVLVNIPAASLEAVE----NGKVGLRSTVIVGRVDR-QTPILHSRINRIMFN 241
                G R ++VNIP   L A +       + L   VIVG+    +TP+    +  I F+
Sbjct: 284 P-LTAGPRVIVVNIPEFMLRAYDYVDGKLDIKLEMKVIVGKALNTRTPMFREDMRYIEFS 342

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           PYW +P SI + +++   R+DP Y        +        +   + ++        RQ 
Sbjct: 343 PYWNVPPSIARSEVVPKSRRDPGYFTRQGFEFVSGGQAITTLSSANLDAVLNGQMRIRQR 402

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG +NA+   K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L+D P
Sbjct: 403 PGPLNALGDIKFVFPNNQNIYLHHTPTPQLFQRGRRDFSHGCIRVEEPVQLAKFVLQDMP 462

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W+   I + +   K+  + L   +PV   Y +A +  D  + F  DIYG D +    + 
Sbjct: 463 EWTEERIRQAMSKGKSNTIALKQPLPVVLAYGTAIARADGRVYFLPDIYGQDKLLEQALR 522

Query: 422 LPED 425
               
Sbjct: 523 QRNP 526


>gi|168243764|ref|ZP_02668696.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194449643|ref|YP_002044987.1| hypothetical protein SeHA_C1093 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407947|gb|ACF68166.1| YcbB [Salmonella enterica subsp. enterica serovar Heidelberg str.
           SL476]
 gi|205337184|gb|EDZ23948.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 606

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 120/435 (27%), Positives = 189/435 (43%), Gaps = 45/435 (10%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ------------------------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                                       + A+D  +  AVK FQ   GL   G++  +T 
Sbjct: 277 DNTTDSAVVSPSAVVDEQTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPATR 336

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L S VIVG
Sbjct: 337 NWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVLASRVIVG 394

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE-- 280
           R DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++     +  
Sbjct: 395 RPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEA 454

Query: 281 VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R 
Sbjct: 455 IDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARA 514

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+  Y++A+  
Sbjct: 515 LSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVG 573

Query: 399 KDSIIQFRDDIYGLD 413
            D  +Q+R DIY  D
Sbjct: 574 ADGRMQYRTDIYNYD 588


>gi|226946156|ref|YP_002801229.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
 gi|226721083|gb|ACO80254.1| petidoglycan binding protein [Azotobacter vinelandii DJ]
          Length = 530

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 110/406 (27%), Positives = 174/406 (42%), Gaps = 16/406 (3%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK---------ETIAQTE 79
           + +    LD+   E      +       A       + +  +           E      
Sbjct: 127 RHLAYGRLDQARVEPLWRAPDSPAPASPALFPAFAVTRLDDLPAAFAEARPDFEPYRALR 186

Query: 80  KAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG--LSVAFDA 136
            A A  +    R  W  +P   L   G +   V  L +RL   G L           +  
Sbjct: 187 HAYAELRRNAPR-AWRLVPDGSLLRPGMTDERVPLLEQRLAAEGYLSERASGRDRQRYTP 245

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  A+K FQ +H LD  G+V  +TL  +NV    R+ Q++VNL R + L  + M    +
Sbjct: 246 QLVEAMKRFQAKHFLDDDGVVGPATLTELNVTPAERLAQVRVNLERFRWLARE-MEPTLL 304

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           LV++  A L    + +   ++   VGR  R TP+L S++  +  NP W +P +I+++D +
Sbjct: 305 LVDVAGAQLTFFHDHQPRWQTRTQVGRPTRPTPLLKSQVTHLTLNPTWTVPPTILREDKL 364

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
             +R++  +L   N+ +ID +GKE+    VDW+   P   + RQDPG  N +    I F 
Sbjct: 365 PRIRRNIGFLASQNLRVIDRQGKELNPRNVDWH--NPSGIMLRQDPGPHNPLGRIAIRFP 422

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV   + L   LL+      R   EE++ + K
Sbjct: 423 NPFAVYLHDTPSQHLFAKETRTLSSGCVRVERAMQLTDLLLEGASPAERQRFEEILASGK 482

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           T  + L   VP+   Y +        + FR DIY  D   V  +  
Sbjct: 483 TRNLNLPRPVPILLAYWTVQVDDGGQLVFRPDIYAHDGKLVAALNA 528


>gi|121606474|ref|YP_983803.1| peptidoglycan-binding domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120595443|gb|ABM38882.1| Peptidoglycan-binding domain 1 protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 525

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 119/428 (27%), Positives = 193/428 (45%), Gaps = 26/428 (6%)

Query: 20  LPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLA--------RVDMGIDSDIPII 70
           L   +      +H   +D + I+ ++     + FD            R+        P +
Sbjct: 92  LSTAMERYLSDVHRGRIDPQKIHHNFSPPQREAFDAAAYLQAALAARRLTDAASEAAPRL 151

Query: 71  SKETIAQTEKAIAFYQDILSRGGW----PELP---IRPLHLGNSSVSVQRLRERLIISGD 123
                AQ  +A+A Y++ ++   W    P LP      L  G S   +  L ERL   GD
Sbjct: 152 P--IYAQLREALARYRERVNHPAWRQPLPRLPGGKAGKLAPGQSYAGLALLAERLTALGD 209

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           + P   L   ++  +  A K FQ RHGL   G++  +TL  + V    R+RQ+++ L R+
Sbjct: 210 MAPGLPLPARYEGPLVDAAKAFQQRHGLAADGVIGKTTLAQLQVMPAARVRQIELALERL 269

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE--NGK--VGLRSTVIVGRV-DRQTPILHSRINRI 238
           +     + G R ++VNIP   L A E  +G+  V     ++VG+  D +TP+    +  I
Sbjct: 270 RWTPLLQ-GPRMIVVNIPEFVLRAYEVQDGQIHVQQEMKIVVGKALDTRTPLFDEDMRFI 328

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW-NSPEPPNFI 297
            F+PYW +P SI + +++  LR+DP YL   N+  +   G+           +       
Sbjct: 329 EFSPYWNVPPSIARAEIVPRLRRDPGYLARENMEFVSAGGRVDKTVSAGLLEAVLAGQSR 388

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  NA+   K  F + +N Y+H TP   LF    R  + GC+RV + + L  ++L
Sbjct: 389 IRQRPGPKNALGDIKFVFPNSDNIYLHHTPATQLFERARRDFSHGCIRVEHPVALAKFVL 448

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
           K+ P W+   I+  +   ++  ++LA  VPV   Y +    KD    F DDIYGLD +  
Sbjct: 449 KNMPEWTPERIQNAMSRGESATLRLAEPVPVLIAYGTTLV-KDGRTFFFDDIYGLDRLLD 507

Query: 418 GIIPLPED 425
             +     
Sbjct: 508 AALRKHSG 515


>gi|16128892|ref|NP_415445.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107775|ref|AP_001555.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080583|ref|YP_001729903.1| carboxypeptidase [Escherichia coli str. K-12 substr. DH10B]
 gi|238900183|ref|YP_002925979.1| putative carboxypeptidase [Escherichia coli BW2952]
 gi|2506630|sp|P22525|YCBB_ECOLI RecName: Full=Probable L,D-transpeptidase YcbB
 gi|1787155|gb|AAC74011.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062492|dbj|BAA35671.1| predicted carboxypeptidase [Escherichia coli str. K12 substr.
           W3110]
 gi|169888418|gb|ACB02125.1| predicted carboxypeptidase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238862186|gb|ACR64184.1| predicted carboxypeptidase [Escherichia coli BW2952]
 gi|260449929|gb|ACX40351.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|315135573|dbj|BAJ42732.1| hypothetical protein ECDH1ME8569_0876 [Escherichia coli DH1]
          Length = 615

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|157160446|ref|YP_001457764.1| hypothetical protein EcHS_A1032 [Escherichia coli HS]
 gi|170020673|ref|YP_001725627.1| hypothetical protein EcolC_2671 [Escherichia coli ATCC 8739]
 gi|188494298|ref|ZP_03001568.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194438718|ref|ZP_03070805.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|253774046|ref|YP_003036877.1| hypothetical protein ECBD_2670 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161039|ref|YP_003044147.1| hypothetical protein ECB_00929 [Escherichia coli B str. REL606]
 gi|256023374|ref|ZP_05437239.1| hypothetical protein E4_08369 [Escherichia sp. 4_1_40B]
 gi|297521034|ref|ZP_06939420.1| hypothetical protein EcolOP_25597 [Escherichia coli OP50]
 gi|300929620|ref|ZP_07145082.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300949712|ref|ZP_07163691.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300955427|ref|ZP_07167801.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|301022419|ref|ZP_07186302.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301643445|ref|ZP_07243493.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307137554|ref|ZP_07496910.1| hypothetical protein EcolH7_05406 [Escherichia coli H736]
 gi|331641451|ref|ZP_08342586.1| putative amidase [Escherichia coli H736]
 gi|157066126|gb|ABV05381.1| putative peptidoglycan binding domain [Escherichia coli HS]
 gi|169755601|gb|ACA78300.1| Peptidoglycan-binding domain 1 protein [Escherichia coli ATCC 8739]
 gi|188489497|gb|EDU64600.1| putative peptidoglycan binding domain [Escherichia coli 53638]
 gi|194422350|gb|EDX38350.1| putative peptidoglycan binding domain protein [Escherichia coli
           101-1]
 gi|242376740|emb|CAQ31453.1| L,D-transpeptidase YcbB [Escherichia coli BL21(DE3)]
 gi|253325090|gb|ACT29692.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972940|gb|ACT38611.1| predicted carboxypeptidase [Escherichia coli B str. REL606]
 gi|253977154|gb|ACT42824.1| predicted carboxypeptidase [Escherichia coli BL21(DE3)]
 gi|299881260|gb|EFI89471.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300317650|gb|EFJ67434.1| hypothetical protein HMPREF9547_01312 [Escherichia coli MS 175-1]
 gi|300450893|gb|EFK14513.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300462457|gb|EFK25950.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|301078159|gb|EFK92965.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|315619119|gb|EFU99699.1| putative peptidoglycan binding domain protein [Escherichia coli
           3431]
 gi|323938031|gb|EGB34293.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942841|gb|EGB39006.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323962917|gb|EGB58491.1| ykud domain-containing protein [Escherichia coli H489]
 gi|331038249|gb|EGI10469.1| putative amidase [Escherichia coli H736]
 gi|332342367|gb|AEE55701.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 615

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|261821332|ref|YP_003259438.1| hypothetical protein Pecwa_2052 [Pectobacterium wasabiae WPP163]
 gi|261605345|gb|ACX87831.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 575

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 105/434 (24%), Positives = 179/434 (41%), Gaps = 45/434 (10%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYH---SIVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL    G+         S +   +        S      ++        + S  P  S+ 
Sbjct: 134 YLQFVSGVERNGNNWLYSSVPYRLQSPAVNIVSQWQQAVNS--GTSAAYVASLTPSHSQ- 190

Query: 74  TIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPS----- 127
             A+  +A+     +     WP L     L     S  +  LRE L  +G L  +     
Sbjct: 191 -YAKMHEALKTM--LTDNRPWPSLNLAESLRPEQQSRELVALREILQRTGMLSLTESITL 247

Query: 128 ----------------------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                       +   +  AVK FQ   GL+  G++   T + +
Sbjct: 248 FNENVSATTTPLTEQTPVDNGVANADDRYSGDLVEAVKRFQHWQGLEGDGVIGKRTRDWL 307

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           NV   +R   L +N+ R++ + +       ++VNIP  SL   ++G   L S VIVG+  
Sbjct: 308 NVSPQMRATLLALNIQRLRLVPDNV--HTGIMVNIPNYSLIYYQDGAERLSSRVIVGQPK 365

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVF 282
           R+TP++ S +  ++ NP W +P ++ ++D++  + +DP YL+ +   ++    +    + 
Sbjct: 366 RKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGWSQDAEAID 425

Query: 283 VEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              ++W         +  RQ PG  N++   K    +    Y+HDTP   LF   +R  +
Sbjct: 426 PSMIEWQGVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRDIRALS 485

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGCVRV    +L   LL+D   W+   I   +    TT V +   +PV+  Y++AW  +D
Sbjct: 486 SGCVRVNKASELASMLLQDA-GWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAWVAED 544

Query: 401 SIIQFRDDIYGLDN 414
              QFR DIY  D+
Sbjct: 545 GRPQFRTDIYNYDD 558


>gi|56413956|ref|YP_151031.1| hypothetical protein SPA1803 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362879|ref|YP_002142516.1| hypothetical protein SSPA1676 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128213|gb|AAV77719.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094356|emb|CAR59868.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 615

 Score =  362 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAIVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|91210027|ref|YP_540013.1| hypothetical protein UTI89_C0997 [Escherichia coli UTI89]
 gi|117623143|ref|YP_852056.1| hypothetical protein APECO1_37 [Escherichia coli APEC O1]
 gi|218557830|ref|YP_002390743.1| hypothetical protein ECS88_0953 [Escherichia coli S88]
 gi|237707087|ref|ZP_04537568.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|91071601|gb|ABE06482.1| hypothetical protein YcbB [Escherichia coli UTI89]
 gi|115512267|gb|ABJ00342.1| YcbB [Escherichia coli APEC O1]
 gi|218364599|emb|CAR02285.1| putative exported enzyme [Escherichia coli S88]
 gi|226898297|gb|EEH84556.1| YcbB [Escherichia sp. 3_2_53FAA]
 gi|294493685|gb|ADE92441.1| putative peptidoglycan binding domain protein [Escherichia coli
           IHE3034]
 gi|307627648|gb|ADN71952.1| hypothetical protein UM146_12925 [Escherichia coli UM146]
 gi|315287548|gb|EFU46954.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323953367|gb|EGB49233.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323958230|gb|EGB53939.1| ykud domain-containing protein [Escherichia coli H263]
          Length = 615

 Score =  362 bits (928), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDQGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKLMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|168822072|ref|ZP_02834072.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|205341461|gb|EDZ28225.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|320085238|emb|CBY95023.1| Uncharacterized protein ycbB [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|262393898|ref|YP_003285752.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
 gi|262337492|gb|ACY51287.1| L,D-transpeptidase YcbB [Vibrio sp. Ex25]
          Length = 513

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 172/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    L + +      +  ++ F +  + +        PI  +  +A     
Sbjct: 143 TLSVLSNEITVGKLSQFLASLRSPLQTDEAFYSAYSSLSEHAKYQYPIYEQTGLA----- 197

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ + G D+      +  +D  +E 
Sbjct: 198 ---------------------RVGDQLENKPLLIERMEVVGVDVSYLDITTQQYDEELEL 236

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ  HGL   G++  +T+  +N     R+  L +N  R +   + +     V VN+
Sbjct: 237 AVKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKDR--DNVVFVNV 294

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P +I+ KD++  ++
Sbjct: 295 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMSGTLDSVILNPTWNVPWTIMVKDIIPKVK 354

Query: 261 QDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I      + +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 355 RNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLHNALGLYKFNMP 414

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV +   L   L K      R   +     R 
Sbjct: 415 NPQAIYLHDTPSKNLFERDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESTRRS 474

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 475 NTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|309795089|ref|ZP_07689509.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308121393|gb|EFO58655.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|281178056|dbj|BAI54386.1| putative amidase [Escherichia coli SE15]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKLMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|331662339|ref|ZP_08363262.1| putative amidase [Escherichia coli TA143]
 gi|331060761|gb|EGI32725.1| putative amidase [Escherichia coli TA143]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|227356807|ref|ZP_03841192.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
 gi|227163097|gb|EEI48032.1| peptidoglycan binding domain protein [Proteus mirabilis ATCC 29906]
          Length = 571

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 104/418 (24%), Positives = 174/418 (41%), Gaps = 19/418 (4%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISK 72
           F  Y+     ++     +      + +       V   + +     +   + S  P    
Sbjct: 150 FLGYISFVEQINQSGTTLLYRAAIQALPAPTVQAVEHFQLNLQQNTLGRFVVSFAPSHP- 208

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                 ++ +     +     WP +  +  L    S+  V  LR+ L     L       
Sbjct: 209 -YYPLMKEEVRK--QLHQEVIWPVMEGKNSLKPNQSAEEVIALRQILRNLNLLPQLAENE 265

Query: 132 V-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +D  + +AVK FQ  HGL+  G++   T   +N+    R   + +N+ R++  
Sbjct: 266 QEVATTIYDEPLIAAVKSFQAAHGLETDGIIGRQTRNWLNMTPIQRAGIMALNIQRLRLT 325

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +G   + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +N ++ NP W +
Sbjct: 326 PP--IGDTGIWVNIPDYSLYFYANNQLILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNV 383

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QD 301
           P S+ +KD++   + DP Y       +    G     +   ++DW +    NF +R  Q 
Sbjct: 384 PTSMTRKDIVPKGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWENISAANFPYRIWQA 443

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    +    Y+HDTP   LF   +R  +SGC+RV     L   LL D  
Sbjct: 444 PGPTNSLGRYKFNMPNSEAIYLHDTPNHNLFTKNMRAISSGCIRVNKAAQLATILLGDA- 502

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            W +  I+  +K   T    +   +PV+  Y +AW  +++  Q+R DIY  D      
Sbjct: 503 GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAEENAPQYRADIYNYDQSINNA 560


>gi|331672461|ref|ZP_08373251.1| putative amidase [Escherichia coli TA280]
 gi|284920776|emb|CBG33839.1| putative exported protein [Escherichia coli 042]
 gi|331070367|gb|EGI41732.1| putative amidase [Escherichia coli TA280]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|168233416|ref|ZP_02658474.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194468577|ref|ZP_03074561.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|194454941|gb|EDX43780.1| YcbB [Salmonella enterica subsp. enterica serovar Kentucky str.
           CVM29188]
 gi|205332469|gb|EDZ19233.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
          Length = 615

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTSDSAVVSPSAVVDETSVAQPVDEQTARSSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|188584494|ref|YP_001927939.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179347992|gb|ACB83404.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 602

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 135/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 128 LPTYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHPAIPSLRHHLTLTGDLP 187

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  +D  + +AVK FQ RHGL  +G++   TL A+NVP D R RQL+ +  R+  
Sbjct: 188 ADAPPSDRYDPPLVAAVKAFQARHGLPDAGILGRLTLNALNVPADTRQRQLRASAQRLMG 247

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP W 
Sbjct: 248 -SNFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNLNPTWT 306

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD G  
Sbjct: 307 VPVSVIRNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPTTIDWNTQKAVNYTLRQDSGLD 366

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T     
Sbjct: 367 NSLGQIRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNG 426

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 427 AGSTWGPIEIETAIAAGERRDVKLVKPTPVAFVYLTGYATSDGRVHFRDDIYGLD 481


>gi|157157051|ref|YP_001462144.1| hypothetical protein EcE24377A_1024 [Escherichia coli E24377A]
 gi|256020947|ref|ZP_05434812.1| hypothetical protein ShiD9_18662 [Shigella sp. D9]
 gi|301326639|ref|ZP_07219969.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332282170|ref|ZP_08394583.1| conserved hypothetical protein [Shigella sp. D9]
 gi|157079081|gb|ABV18789.1| putative peptidoglycan binding domain [Escherichia coli E24377A]
 gi|300846684|gb|EFK74444.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|332104522|gb|EGJ07868.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323185369|gb|EFZ70733.1| putative peptidoglycan binding domain protein [Escherichia coli
           1357]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  ++D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRASYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|290473860|ref|YP_003466734.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
 gi|289173167|emb|CBJ79940.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           bovienii SS-2004]
          Length = 572

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 111/405 (27%), Positives = 176/405 (43%), Gaps = 14/405 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           YL     +         S     IN     +++          D  + S I  +S     
Sbjct: 154 YLHFVNDVKKKGDSWLYSKKSYKINLPPPDLIDKW---QQHITDNNVFSYITALSPNNPM 210

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--A 133
                    + +  +  W +      L  G +S SV  LRE LI S  LD          
Sbjct: 211 YKNMRKEMLKQLADKQQWSDFSMKGTLRPGQNSESVVALREILIRSDTLDSLTVKPENKV 270

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           ++  + +AVK FQ  HGL   G++  ST   +N     R R + +N+ R++ + +     
Sbjct: 271 YNKELVAAVKRFQALHGLSADGVIGQSTKVWLNTTPQTRARIMALNIQRLRIIPDNIP-- 328

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             +LVNIP  SL    +GK  L S V+VGR  R+TPI+ S +N ++ NP W +P S+ +K
Sbjct: 329 TGILVNIPNYSLFYYLDGKEVLNSKVVVGRPSRKTPIMSSNLNNVVINPPWTVPTSMTRK 388

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWN--SPEPPNFIFRQDPGKINAM 308
           D+     +DP Y +     +        K +    ++W+  +P    +  RQ PG  N++
Sbjct: 389 DIAPRAMRDPSYFRSRGYTVFSSWSNDAKVIDPSSINWDVTTPNNFPYRIRQAPGPTNSL 448

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    +    Y+HDTP    F   +R  +SGCVRV    +L   LL +   W++  +
Sbjct: 449 GRFKFNMPNSEAIYLHDTPNQASFGREMRAVSSGCVRVNKAPELANMLLGNA-GWNKDRV 507

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +KT  T  V +  ++PV   Y +AW  +  + Q+R DIY  D
Sbjct: 508 SNSLKTWTTAYVNIPKKIPVFLYYQTAWVDEGGVPQYRADIYDYD 552


>gi|82544667|ref|YP_408614.1| hypothetical protein SBO_2216 [Shigella boydii Sb227]
 gi|191166981|ref|ZP_03028804.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|193064628|ref|ZP_03045707.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|193070734|ref|ZP_03051669.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194428336|ref|ZP_03060877.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209918175|ref|YP_002292259.1| hypothetical protein ECSE_0984 [Escherichia coli SE11]
 gi|218553512|ref|YP_002386425.1| hypothetical protein ECIAI1_0966 [Escherichia coli IAI1]
 gi|218694399|ref|YP_002402066.1| hypothetical protein EC55989_0971 [Escherichia coli 55989]
 gi|260843174|ref|YP_003220952.1| putative carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|260854216|ref|YP_003228107.1| putative carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|293433222|ref|ZP_06661650.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300816970|ref|ZP_07097189.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300823665|ref|ZP_07103792.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300902916|ref|ZP_07120861.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300921037|ref|ZP_07137424.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|301302465|ref|ZP_07208596.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|307311688|ref|ZP_07591328.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|331667303|ref|ZP_08368168.1| putative amidase [Escherichia coli TA271]
 gi|331676713|ref|ZP_08377409.1| putative amidase [Escherichia coli H591]
 gi|81246078|gb|ABB66786.1| putative amidase [Shigella boydii Sb227]
 gi|190902975|gb|EDV62701.1| putative peptidoglycan binding domain [Escherichia coli B7A]
 gi|192927685|gb|EDV82300.1| putative peptidoglycan binding domain [Escherichia coli E22]
 gi|192955927|gb|EDV86395.1| putative peptidoglycan binding domain [Escherichia coli E110019]
 gi|194413551|gb|EDX29832.1| putative peptidoglycan binding domain protein [Escherichia coli
           B171]
 gi|209911434|dbj|BAG76508.1| putative amidase [Escherichia coli SE11]
 gi|218351131|emb|CAU96835.1| putative exported enzyme [Escherichia coli 55989]
 gi|218360280|emb|CAQ97830.1| putative exported enzyme [Escherichia coli IAI1]
 gi|257752865|dbj|BAI24367.1| predicted carboxypeptidase [Escherichia coli O26:H11 str. 11368]
 gi|257758321|dbj|BAI29818.1| predicted carboxypeptidase [Escherichia coli O103:H2 str. 12009]
 gi|291324041|gb|EFE63463.1| hypothetical protein ECCG_01347 [Escherichia coli B088]
 gi|300405058|gb|EFJ88596.1| hypothetical protein HMPREF9536_01061 [Escherichia coli MS 84-1]
 gi|300412028|gb|EFJ95338.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300523865|gb|EFK44934.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|300530322|gb|EFK51384.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300842304|gb|EFK70064.1| hypothetical protein HMPREF9347_01042 [Escherichia coli MS 124-1]
 gi|306908243|gb|EFN38742.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|315060210|gb|ADT74537.1| murein L,D-transpeptidase [Escherichia coli W]
 gi|315257966|gb|EFU37934.1| putative amidase [Escherichia coli MS 85-1]
 gi|320183824|gb|EFW58657.1| L,D-transpeptidase YcbB [Shigella flexneri CDC 796-83]
 gi|323157188|gb|EFZ43311.1| putative peptidoglycan binding domain protein [Escherichia coli
           EPECa14]
 gi|323159552|gb|EFZ45532.1| putative peptidoglycan binding domain protein [Escherichia coli
           E128010]
 gi|323379230|gb|ADX51498.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323947286|gb|EGB43294.1| ykud domain-containing protein [Escherichia coli H120]
 gi|324117210|gb|EGC11118.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331065659|gb|EGI37552.1| putative amidase [Escherichia coli TA271]
 gi|331075402|gb|EGI46700.1| putative amidase [Escherichia coli H591]
 gi|332093526|gb|EGI98584.1| putative peptidoglycan binding domain protein [Shigella boydii
           3594-74]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|238893981|ref|YP_002918715.1| hypothetical protein KP1_1925 [Klebsiella pneumoniae NTUH-K2044]
 gi|238546297|dbj|BAH62648.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 596

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 184/422 (43%), Gaps = 32/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S     +     S++N  +       +   I    P   +   
Sbjct: 164 YLHFISGIPTQGTRWLYSSTPYKMATPPLSVINQWQLALDNGSLPAFIAGLAPRHPQ--Y 221

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK------ 128
               +++     +     WP++     L  G  S  +  LRE L  +G L+ S       
Sbjct: 222 EAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGALREILQRTGMLENSANIVLPG 279

Query: 129 -------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                             +D  +   VK FQ   GL   G++  ST + +NV    R   
Sbjct: 280 DVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGV 339

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++ L  +      ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +
Sbjct: 340 LALNIQRLRLLPGKL--STGIMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSAL 397

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP 293
           N ++ NP W +P ++ +KD++  +R +P YL+ +   ++        +    VDW++   
Sbjct: 398 NNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITE 457

Query: 294 PNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +
Sbjct: 458 NNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASE 517

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY 
Sbjct: 518 LANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYN 576

Query: 412 LD 413
            D
Sbjct: 577 YD 578


>gi|323973200|gb|EGB68392.1| ykud domain-containing protein [Escherichia coli TA007]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|320202321|gb|EFW76892.1| L,D-transpeptidase YcbB [Escherichia coli EC4100B]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|74311483|ref|YP_309902.1| hypothetical protein SSON_0928 [Shigella sonnei Ss046]
 gi|73854960|gb|AAZ87667.1| putative amidase [Shigella sonnei Ss046]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|222032656|emb|CAP75395.1| Uncharacterized protein ycbB [Escherichia coli LF82]
 gi|312945445|gb|ADR26272.1| hypothetical protein NRG857_04220 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|16764355|ref|NP_459970.1| hypothetical protein STM0995 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167994946|ref|ZP_02576036.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|16419508|gb|AAL19929.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|205327278|gb|EDZ14042.1| YcbB [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|267992734|gb|ACY87619.1| hypothetical protein STM14_1125 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157538|emb|CBW17028.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911981|dbj|BAJ35955.1| hypothetical protein STMDT12_C10120 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223319|gb|EFX48388.1| L,D-transpeptidase YcbB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129260|gb|ADX16690.1| putative L,D-transpeptidase YcbB [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332987886|gb|AEF06869.1| hypothetical protein STMUK_0961 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 613

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/442 (27%), Positives = 189/442 (42%), Gaps = 52/442 (11%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 -------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                                              + A+D  +  AVK FQ   GL   G
Sbjct: 277 DNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADG 336

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L
Sbjct: 337 VIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVL 394

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++ 
Sbjct: 395 ASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMR 454

Query: 276 EKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
               +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   L
Sbjct: 455 GWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTL 514

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+  
Sbjct: 515 FQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNLY 573

Query: 392 YISAWSPKDSIIQFRDDIYGLD 413
           Y++A+   D  +Q+R DIY  D
Sbjct: 574 YLTAFVGADGRMQYRTDIYNYD 595


>gi|16759864|ref|NP_455481.1| hypothetical protein STY0997 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142363|ref|NP_805705.1| hypothetical protein t1939 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213424610|ref|ZP_03357393.1| hypothetical protein SentesTyphi_02366 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213650528|ref|ZP_03380581.1| hypothetical protein SentesTy_26793 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|25367958|pir||AI0615 probable exported protein STY0997 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502157|emb|CAD05395.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137993|gb|AAO69554.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|152969509|ref|YP_001334618.1| hypothetical protein KPN_00952 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150954358|gb|ABR76388.1| putative amidase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 577

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 183/422 (43%), Gaps = 32/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S     +     S++N  +       +   I    P   +   
Sbjct: 145 YLHFISGIPTQGTRWLYSSTPYKMATPPLSVINQWQLALDNGSLPAFIAGLAPRHPQ--Y 202

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK------ 128
               +++     +     WP++     L  G  S  +  LRE L  +G L  S       
Sbjct: 203 EAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGALREILQRTGMLKNSANIVLPG 260

Query: 129 -------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                             +D  +   VK FQ   GL   G++  ST + +NV    R   
Sbjct: 261 DVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGV 320

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++ L  +      ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +
Sbjct: 321 LALNIQRLRLLPGKL--STGIMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSAL 378

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP 293
           N ++ NP W +P ++ +KD++  +R +P YL+ +   ++        +    VDW++   
Sbjct: 379 NNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITE 438

Query: 294 PNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +
Sbjct: 439 NNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASE 498

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY 
Sbjct: 499 LANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYN 557

Query: 412 LD 413
            D
Sbjct: 558 YD 559


>gi|324019066|gb|EGB88285.1| hypothetical protein HMPREF9542_02261 [Escherichia coli MS 117-3]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--SSGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|260867097|ref|YP_003233499.1| putative carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|257763453|dbj|BAI34948.1| predicted carboxypeptidase [Escherichia coli O111:H- str. 11128]
 gi|323175452|gb|EFZ61047.1| putative peptidoglycan binding domain protein [Escherichia coli
           1180]
          Length = 615

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYKNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|220924541|ref|YP_002499843.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949148|gb|ACL59540.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 540

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 136/364 (37%), Positives = 202/364 (55%), Gaps = 9/364 (2%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRER 117
           +        P ++  T   T +    YQ I+  GGWP +P    L  G+ + +V  LR R
Sbjct: 114 LAKISQDPTPTLAPSTFLDTLRMADRYQAIVQAGGWPGVPANLSLKPGDRNPAVALLRRR 173

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L ++ DL      S   D  + +A+K FQ RHGL  +G++   T++A+NVP   R RQL 
Sbjct: 174 LAVTEDLAADAPASDVMDEALVAALKRFQQRHGLPDTGLLGPMTVKALNVPASTRQRQLA 233

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            +  R+        G RYV+ NIP+A++EAVE G V  R   +VG+ DR +P++ +RI  
Sbjct: 234 ASASRLMG-SRFPFGERYVVANIPSATVEAVERGTVARRYVAVVGKPDRASPLVETRITN 292

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           + FNP W +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+ 
Sbjct: 293 VNFNPTWTVPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYT 352

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQDPG  N++   +I+  +R+  YMHDTP   LF+   RF +SGCVRV  +  L  WLL
Sbjct: 353 LRQDPGFDNSLGQVRIDMPNRHAVYMHDTPSKNLFSRTARFHSSGCVRVAEVKGLVGWLL 412

Query: 358 KDTPTWSRY-------HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           + TP             IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y
Sbjct: 413 EGTPGPGGPGTVWGPMEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVY 472

Query: 411 GLDN 414
            LD 
Sbjct: 473 SLDG 476


>gi|204929796|ref|ZP_03220817.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204320790|gb|EDZ05991.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322616425|gb|EFY13334.1| hypothetical protein SEEM315_12488 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619675|gb|EFY16550.1| hypothetical protein SEEM971_17482 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622629|gb|EFY19474.1| hypothetical protein SEEM973_13475 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629778|gb|EFY26553.1| hypothetical protein SEEM974_05176 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632500|gb|EFY29246.1| hypothetical protein SEEM201_14855 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637005|gb|EFY33708.1| hypothetical protein SEEM202_02080 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641456|gb|EFY38094.1| hypothetical protein SEEM954_01508 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646078|gb|EFY42594.1| hypothetical protein SEEM054_01025 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649619|gb|EFY46050.1| hypothetical protein SEEM675_16024 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654079|gb|EFY50402.1| hypothetical protein SEEM965_12727 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658611|gb|EFY54873.1| hypothetical protein SEEM19N_16592 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663468|gb|EFY59670.1| hypothetical protein SEEM801_11882 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670204|gb|EFY66344.1| hypothetical protein SEEM507_18659 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671440|gb|EFY67562.1| hypothetical protein SEEM877_09668 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676796|gb|EFY72863.1| hypothetical protein SEEM867_07816 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682720|gb|EFY78739.1| hypothetical protein SEEM180_06862 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686400|gb|EFY82382.1| hypothetical protein SEEM600_05845 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195923|gb|EFZ81090.1| hypothetical protein SEEM581_13131 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199789|gb|EFZ84878.1| hypothetical protein SEEM501_09363 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202782|gb|EFZ87818.1| hypothetical protein SEEM460_08299 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209053|gb|EFZ93990.1| hypothetical protein SEEM020_20065 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323209978|gb|EFZ94885.1| hypothetical protein SEEM6152_04835 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217987|gb|EGA02702.1| hypothetical protein SEEM0077_06119 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219019|gb|EGA03526.1| hypothetical protein SEEM0047_21870 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226592|gb|EGA10797.1| hypothetical protein SEEM0055_10100 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229788|gb|EGA13911.1| hypothetical protein SEEM0052_13157 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233013|gb|EGA17109.1| hypothetical protein SEEM3312_03109 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240748|gb|EGA24790.1| hypothetical protein SEEM5258_12719 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243064|gb|EGA27085.1| hypothetical protein SEEM1156_20569 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323249773|gb|EGA33675.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252754|gb|EGA36592.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259168|gb|EGA42812.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259991|gb|EGA43619.1| hypothetical protein SEEM8284_18068 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323268008|gb|EGA51487.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269856|gb|EGA53305.1| murein L,D-transpeptidase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 615

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDDGPKMALPG 276

Query: 126 --------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEQTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|167553003|ref|ZP_02346753.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
 gi|194442554|ref|YP_002040193.1| hypothetical protein SNSL254_A1028 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194401217|gb|ACF61439.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL254]
 gi|205322472|gb|EDZ10311.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA29]
          Length = 615

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|200389383|ref|ZP_03215994.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199601828|gb|EDZ00374.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAVVDETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|218704353|ref|YP_002411872.1| hypothetical protein ECUMN_1119 [Escherichia coli UMN026]
 gi|293404229|ref|ZP_06648223.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298380010|ref|ZP_06989615.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300901645|ref|ZP_07119705.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|218431450|emb|CAR12328.1| putative exported enzyme [Escherichia coli UMN026]
 gi|291428815|gb|EFF01840.1| hypothetical protein ECGG_02618 [Escherichia coli FVEC1412]
 gi|298279708|gb|EFI21216.1| hypothetical protein ECFG_02813 [Escherichia coli FVEC1302]
 gi|300354938|gb|EFJ70808.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVAALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|197284624|ref|YP_002150496.1| hypothetical protein PMI0730 [Proteus mirabilis HI4320]
 gi|194682111|emb|CAR41705.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 571

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 105/418 (25%), Positives = 175/418 (41%), Gaps = 19/418 (4%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISK 72
           F  Y+     ++     +      + +       V   + +     +   + S  P    
Sbjct: 150 FLGYISFVEQINQSGTTLLYRAAIQALPAPTVQAVEHFQLNLQQNTLGRFVVSFAPSHP- 208

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                 ++ +     +     WP +  +  L    S+  V  LR+ L     L       
Sbjct: 209 -YYPLMKEEVRK--QLHQEVIWPVMEGKNSLKPNQSAEEVIALRQILRNLNLLPQLAESE 265

Query: 132 V-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +DA + +AVK FQ  HGL+  G++   T   +N+    R   + +N+ R++  
Sbjct: 266 QEVATTIYDAPLIAAVKSFQAAHGLETDGIIGRQTRNWLNMTPIQRAGIMALNIQRLRLT 325

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +G   + VNIP  SL    N ++ L S VIVGR DR+TPI+ S +N ++ NP W +
Sbjct: 326 PP--IGDTGIWVNIPDYSLYFYANNQLILDSKVIVGRPDRKTPIMSSALNNVVVNPPWNV 383

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFIFR--QD 301
           P S+ +KD++   + DP Y       +    G     +   ++DW +    NF +R  Q 
Sbjct: 384 PTSMTRKDIVPKGKADPSYFSRKGYTIYSGWGNDAYPINPYDIDWENISAANFPYRIWQA 443

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    +    Y+HDTP   LF   +R  +SGC+RV     L   LL D  
Sbjct: 444 PGPTNSLGRYKFNMPNSEAIYLHDTPNHNLFTKNMRAISSGCIRVNKAAQLATILLGDA- 502

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            W +  I+  +K   T    +   +PV+  Y +AW  +++  Q+R DIY  D      
Sbjct: 503 GWKQDRIDAALKRGSTQYAPIPERIPVYLYYQTAWVAEENAPQYRADIYNYDQSINNA 560


>gi|26246952|ref|NP_752992.1| hypothetical protein c1067 [Escherichia coli CFT073]
 gi|227884110|ref|ZP_04001915.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300978416|ref|ZP_07174264.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301047814|ref|ZP_07194866.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|331656996|ref|ZP_08357958.1| putative amidase [Escherichia coli TA206]
 gi|26107352|gb|AAN79535.1|AE016758_139 Hypothetical protein ycbB [Escherichia coli CFT073]
 gi|227838862|gb|EEJ49328.1| peptidoglycan binding domain protein [Escherichia coli 83972]
 gi|300300306|gb|EFJ56691.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300409658|gb|EFJ93196.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307552764|gb|ADN45539.1| putative peptidoglycan binding domain protein [Escherichia coli ABU
           83972]
 gi|315291223|gb|EFU50583.1| conserved hypothetical protein [Escherichia coli MS 153-1]
 gi|331055244|gb|EGI27253.1| putative amidase [Escherichia coli TA206]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVVGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|300937730|ref|ZP_07152531.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300457237|gb|EFK20730.1| conserved hypothetical protein [Escherichia coli MS 21-1]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|331682434|ref|ZP_08383053.1| putative amidase [Escherichia coli H299]
 gi|331080065|gb|EGI51244.1| putative amidase [Escherichia coli H299]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVVGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|197248211|ref|YP_002145913.1| hypothetical protein SeAg_B1001 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197211914|gb|ACH49311.1| YcbB [Salmonella enterica subsp. enterica serovar Agona str. SL483]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|293414205|ref|ZP_06656854.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331651945|ref|ZP_08352964.1| putative amidase [Escherichia coli M718]
 gi|291434263|gb|EFF07236.1| hypothetical protein ECDG_00758 [Escherichia coli B185]
 gi|331050223|gb|EGI22281.1| putative amidase [Escherichia coli M718]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170683737|ref|YP_001744245.1| hypothetical protein EcSMS35_2195 [Escherichia coli SMS-3-5]
 gi|170521455|gb|ACB19633.1| putative peptidoglycan binding domain [Escherichia coli SMS-3-5]
          Length = 615

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|168466590|ref|ZP_02700452.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
 gi|195631019|gb|EDX49605.1| YcbB [Salmonella enterica subsp. enterica serovar Newport str.
           SL317]
          Length = 614

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 121/443 (27%), Positives = 191/443 (43%), Gaps = 53/443 (11%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 126 -------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                                          P+  +  A+D  +  AVK FQ   GL   
Sbjct: 277 DNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPSVRAAYDRELVEAVKRFQAWQGLGAD 336

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   
Sbjct: 337 GVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQV 394

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++
Sbjct: 395 LASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVM 454

Query: 275 DEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
                +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   
Sbjct: 455 RGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHT 514

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+ 
Sbjct: 515 LFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNL 573

Query: 391 VYISAWSPKDSIIQFRDDIYGLD 413
            Y++A+   D  +Q+R DIY  D
Sbjct: 574 YYLTAFVGADGRMQYRTDIYNYD 596


>gi|161503876|ref|YP_001570988.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865223|gb|ABX21846.1| hypothetical protein SARI_01965 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 644

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 191/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S    ++     S++N  +      ++   + S  P   +   
Sbjct: 189 YLHFIANIPVKGNRWLYSNKPYVLATPPVSVINQWQIALEEGQLPTFVASLAPQNPQ--Y 246

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 247 APMHEALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 304

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 305 DDTSDSAVVSPSAVEVETLVAQPVAEQTARRSKPAPAVRAAYDRELVEAVKRFQAWQGLG 364

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 365 ADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGN 422

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   
Sbjct: 423 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYT 482

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 483 VMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPN 542

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV
Sbjct: 543 HNLFQRDARALSSGCVRVNKAPELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPV 601

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D  +Q+R DIY  D
Sbjct: 602 NLYYLTAFVGADGRMQYRTDIYNYD 626


>gi|168237100|ref|ZP_02662158.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734245|ref|YP_002114048.1| hypothetical protein SeSA_A1110 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194709747|gb|ACF88968.1| YcbB [Salmonella enterica subsp. enterica serovar Schwarzengrund
           str. CVM19633]
 gi|197289807|gb|EDY29168.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
          Length = 615

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 190/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGTLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEQTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|238913232|ref|ZP_04657069.1| hypothetical protein SentesTe_19204 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 615

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEPTARHSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|215486050|ref|YP_002328481.1| hypothetical protein E2348C_0918 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264122|emb|CAS08466.1| predicted carboxypeptidase [Escherichia coli O127:H6 str. E2348/69]
          Length = 615

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 LMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|306812622|ref|ZP_07446815.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
 gi|305853385|gb|EFM53824.1| hypothetical protein ECNC101_11937 [Escherichia coli NC101]
          Length = 615

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|331646190|ref|ZP_08347293.1| putative amidase [Escherichia coli M605]
 gi|330910705|gb|EGH39215.1| l,D-transpeptidase YcbB [Escherichia coli AA86]
 gi|331044942|gb|EGI17069.1| putative amidase [Escherichia coli M605]
          Length = 615

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQITSRSKPAPVVRAAYDNELVEAVKRFQTWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|187731093|ref|YP_001880874.1| hypothetical protein SbBS512_E2393 [Shigella boydii CDC 3083-94]
 gi|187428085|gb|ACD07359.1| putative peptidoglycan binding domain [Shigella boydii CDC 3083-94]
          Length = 615

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L LG  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRLGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|323967172|gb|EGB62596.1| ykud domain-containing protein [Escherichia coli M863]
 gi|327253715|gb|EGE65344.1| putative peptidoglycan binding domain protein [Escherichia coli
           STEC_7v]
          Length = 615

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLFYLTAFVGADGRTQYRTDIYNYD 597


>gi|110641122|ref|YP_668852.1| hypothetical protein ECP_0936 [Escherichia coli 536]
 gi|191172097|ref|ZP_03033641.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300983088|ref|ZP_07176432.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|110342714|gb|ABG68951.1| hypothetical protein YcbB [Escherichia coli 536]
 gi|190907624|gb|EDV67219.1| putative peptidoglycan binding domain [Escherichia coli F11]
 gi|300306992|gb|EFJ61512.1| hypothetical protein HMPREF9553_02391 [Escherichia coli MS 200-1]
 gi|324009854|gb|EGB79073.1| hypothetical protein HMPREF9532_00405 [Escherichia coli MS 57-2]
 gi|324012952|gb|EGB82171.1| hypothetical protein HMPREF9533_03020 [Escherichia coli MS 60-1]
          Length = 615

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVVGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD    ++   
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 132 ---------------------------------------VAFDAYVESAVKLFQMRHGLD 152
                                                   A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPVPVVRAAYDNELVEAVKRFQTWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|312969009|ref|ZP_07783216.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
 gi|312286411|gb|EFR14324.1| putative peptidoglycan binding domain protein [Escherichia coli
           2362-75]
          Length = 611

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 LMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|309701201|emb|CBJ00501.1| putative exported protein [Escherichia coli ETEC H10407]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 188/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LCDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q  G  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQASGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|325106518|ref|YP_004276172.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324975366|gb|ADY54350.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 548

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 23/390 (5%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLAR-VDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
            AS   +          +D  D+ L     +      P+  +      +  +  Y+++ S
Sbjct: 171 KASKSVQWYVPRKKVSYSDLLDSLLTNKSSVYTVEGRPVYRQ--YMLLKSFLTKYRELES 228

Query: 91  RGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +     +      +   +G+SS ++ ++R+RL   GD   S  LS  +DA ++ AV  FQ
Sbjct: 229 QREVTTIGLDAGKKSYKIGDSSDNIVKIRKRLHFLGDYKESDTLSALYDANLKEAVSNFQ 288

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            RHGL   G++ + T++ MNVP+  R++ + VN+ R + +    +   Y+ VNIP   L 
Sbjct: 289 ERHGLTNDGVIGAGTIKEMNVPLRDRVKTIIVNMERFRWVPAG-LNKEYLGVNIPEYKLH 347

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
                 +     V+VG+   +T +    +  I+F+PYW +P SI++ +++  + ++  YL
Sbjct: 348 VYNADSLLWSCNVVVGKELHKTVVFQGDLKYIVFSPYWNVPPSIVRNEILPAMNRNAGYL 407

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           K +N+ +                  E    + RQ PGK N++   K  F +  N Y+HDT
Sbjct: 408 KQHNMEI---------------TGHENGLPVIRQLPGKDNSLGLVKFLFPNNFNIYLHDT 452

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF+   R  + GC+RV     L  +LLKD   W    I++ +   K   V L   V
Sbjct: 453 PAKSLFSMEDRAFSHGCIRVSEPKKLAEFLLKDDKAWDSISIDKAMHQTKEKWVTLKNPV 512

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           PV   Y +A+  +   I FR DIY  D+  
Sbjct: 513 PVFISYFTAFVDRKGQINFRKDIYDRDSAL 542


>gi|315296218|gb|EFU55525.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD    ++   
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 132 ---------------------------------------VAFDAYVESAVKLFQMRHGLD 152
                                                   A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPVPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|320177116|gb|EFW52131.1| L,D-transpeptidase YcbB [Shigella dysenteriae CDC 74-1112]
          Length = 611

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPT 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|260597325|ref|YP_003209896.1| murein L,D-transpeptidase [Cronobacter turicensis z3032]
 gi|260216502|emb|CBA29674.1| Uncharacterized protein ycbB [Cronobacter turicensis z3032]
          Length = 521

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 123/448 (27%), Positives = 192/448 (42%), Gaps = 43/448 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S           +++N  +       V   + S  P+      
Sbjct: 79  YLQFISGIPSQGNRWLYSEKPYKPEMPALNVLNQWQVALDNGSVPAFVRSLAPVHP--HY 136

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    ++     +     WP++  +  L  G  S  V  L+E L  +G LD         
Sbjct: 137 AAMHASLLQL--VADTRPWPQMTGKEKLRPGQWSSDVPALKEILQRTGMLDGGPDIVLPG 194

Query: 126 -------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                                K     +D  + +AVK FQ   GL   G++  ST + +N
Sbjct: 195 DNNGVVSPSAASQPASQTSTPKPARAVYDKDLVAAVKRFQKWQGLGADGVIGQSTRDWLN 254

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           V    R   L +N+ R++ L  +      ++VNIP  SL   +NG   L S VIVGR DR
Sbjct: 255 VTPAQRAALLALNIQRLRLLPGKL--STGIMVNIPEYSLVYYQNGSPVLASRVIVGRPDR 312

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFV 283
           +TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +++  G     V  
Sbjct: 313 KTPLMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLESHGYTVLNGWGSNADVVDP 372

Query: 284 EEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   LF    R  +S
Sbjct: 373 WMVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDSRALSS 432

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+  +D 
Sbjct: 433 GCVRVNKASELANMLLQDA-GWNDSRISQTLKEGNTRYVNIPQTIPVNLYYLTAFIGEDG 491

Query: 402 IIQFRDDIYGLD-NVHVGIIPLPEDHPI 428
             Q+R DIY  D     G   LP+   +
Sbjct: 492 RPQYRTDIYNYDHTARSGAQILPKVEQL 519


>gi|301023047|ref|ZP_07186856.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300397253|gb|EFJ80791.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKDQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|293409302|ref|ZP_06652878.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
 gi|291469770|gb|EFF12254.1| hypothetical protein ECEG_00235 [Escherichia coli B354]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITDSNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170742780|ref|YP_001771435.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168197054|gb|ACA19001.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 545

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 138/357 (38%), Positives = 200/357 (56%), Gaps = 9/357 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
            P ++  T   T +    YQ I+  GGWP +P    L  G+    V  LR RL  + DL 
Sbjct: 127 TPTLTPATFLDTLRMADRYQAIVQAGGWPSVPASLSLKPGDRHPGVLALRRRLAATEDLP 186

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +S   D  + +AV  FQ RHGL  +G+V + T++A+NVP  +R RQL  +  R+  
Sbjct: 187 ADAPVSDRMDEALVAAVTRFQHRHGLPETGLVGAMTVKALNVPASVRQRQLAASAARLMG 246

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV+ NIPAA++EAVE G V  R   +VG+ DR +P++ +RI  + FNP W 
Sbjct: 247 -SRFPFGERYVVANIPAAAVEAVERGAVVRRYVAVVGKPDRASPMVETRITNVNFNPTWT 305

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+KD++  +R+DP YL   +I M+D +G EV    +DW++ +  N+  RQDPG  
Sbjct: 306 VPVSLIKKDIIPHMRKDPGYLAKMHIRMLDGQGNEVQPTAIDWSTEKAVNYTVRQDPGFD 365

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   +I+  +R+  YMHDTP   LF   +RF +SGCVRV  +  L  WLL+ TP    
Sbjct: 366 NSLGQVRIDMPNRHAVYMHDTPSKSLFTRTIRFHSSGCVRVAEVKGLVAWLLEGTPGPGG 425

Query: 366 Y-------HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                    IE  + T +   +KLA  VPV FVY++ ++  D    FRDD+Y LD  
Sbjct: 426 PGTVWGPIEIETGIATGERRDIKLAKPVPVTFVYLTGYATPDGRAHFRDDVYNLDGA 482


>gi|300925397|ref|ZP_07141282.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
 gi|300418467|gb|EFK01778.1| hypothetical protein HMPREF9548_03475 [Escherichia coli MS 182-1]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVENPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|205360811|ref|ZP_02686636.2| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205346897|gb|EDZ33528.1| putative peptidoglycan binding domain protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 640

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 185 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 242

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 243 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 300

Query: 126 ----------PSKGLSVA-----------------------FDAYVESAVKLFQMRHGLD 152
                     PS  +                          +D  +  AVK FQ   GL 
Sbjct: 301 DNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 360

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 361 ADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGN 418

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   
Sbjct: 419 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYT 478

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 479 VMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPN 538

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV
Sbjct: 539 HTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPV 597

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D  +Q+R DIY  D
Sbjct: 598 NLYYLTAFVGADGRMQYRTDIYNYD 622


>gi|161614766|ref|YP_001588731.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161364130|gb|ABX67898.1| hypothetical protein SPAB_02518 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 615

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAVADETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 515 TLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|255035938|ref|YP_003086559.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254948694|gb|ACT93394.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 540

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 114/410 (27%), Positives = 182/410 (44%), Gaps = 31/410 (7%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
           FF Y  L        K I+   L+  I            D+ L      + +  P+    
Sbjct: 145 FFRYTDLAYSGD---KRINTQELNWFI-PRRKLNPEVFLDSLLKNKGQNVAAYEPV--NR 198

Query: 74  TIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
                ++ +  Y  I   G    +   +    G+    +  L+ RL + GDL        
Sbjct: 199 HYNLLKQKVLEYYTITKNGEPAAVDTDKKFREGDRDTLITALKTRLHLLGDLPEPDSTP- 257

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            FD  + +AVK FQ R G   +G+   +  + +NVPV  RIRQ+ +N+ RI+ +      
Sbjct: 258 VFDTTLTAAVKHFQQRVGQKQTGVTGPAFFKELNVPVTARIRQMLINMERIRWMPAAPPT 317

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             Y+LVNIP  +L A E+GK+     V+VG     T I    +N+++F+PYW +P SI++
Sbjct: 318 D-YILVNIPEFTLHAYEDGKLSFDMVVVVGSEANSTVIFSGTLNQVVFSPYWNVPTSILK 376

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+++  ++++P YL  +N+                WN         RQ PGK N++   K
Sbjct: 377 KEVLPGIKKNPNYLARHNME---------------WNGGS-----VRQKPGKSNSLGLVK 416

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             F +  + Y HDTP   LF    R  + GC+R+     +  WLL+   TW+   I   +
Sbjct: 417 FLFPNSYSIYFHDTPSKSLFKESQRAFSHGCIRLAEPKKMAEWLLRRDSTWTSEKITAAM 476

Query: 373 KTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            + K   V+L    EVPV   Y ++W  +   +QFR D+YG D      +
Sbjct: 477 NSGKEKYVRLRGKNEVPVFIGYFTSWVDQHGNLQFRKDVYGHDRRMEERL 526


>gi|206576426|ref|YP_002239427.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288936277|ref|YP_003440336.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206565484|gb|ACI07260.1| putative peptidoglycan binding protein [Klebsiella pneumoniae 342]
 gi|288890986|gb|ADC59304.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 596

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 184/422 (43%), Gaps = 32/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S     +     S++N  +       +   I    P   +   
Sbjct: 164 YLHFISGIPTQGTRWLYSSTPYKMATPPLSVINQWQLALDNGSLPAFIAGLAPHHPQ--Y 221

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK------ 128
               +++     +     WP++     L  G  S  +  LRE L  +G LD +       
Sbjct: 222 EAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGALREILQRTGMLDNTANIVLPG 279

Query: 129 -------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                             +D  +   VK FQ   GL   G++  ST + +NV    R   
Sbjct: 280 DVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGV 339

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++ L  +      ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +
Sbjct: 340 LALNIQRLRLLPGKL--STGIMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSAL 397

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP 293
           N ++ NP W +P ++ +KD++  +R +P YL+ +   ++        +    VDW++   
Sbjct: 398 NNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITE 457

Query: 294 PNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +
Sbjct: 458 NNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASE 517

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY 
Sbjct: 518 LANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYN 576

Query: 412 LD 413
            D
Sbjct: 577 YD 578


>gi|30250492|ref|NP_842562.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
 gi|30139333|emb|CAD86485.1| putative periplasmic protein [Nitrosomonas europaea ATCC 19718]
          Length = 578

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 112/427 (26%), Positives = 208/427 (48%), Gaps = 22/427 (5%)

Query: 19  ILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLARVDMG-----IDSDIPIISK 72
           +L +   L    + A++ D +           +     +A VD       + + +P    
Sbjct: 150 LLALVHDLSNGRLTATLADPDWYVPQRRLDPVNFLQQSIASVDSAEQLEQVLASLPPNMP 209

Query: 73  ETIAQTEKAIAFYQDILSRGG-WPELPIR--PLHLGNSSVSVQRLRERLIIS------GD 123
           +     ++ +   + +++ G  W  +P     +H      ++  +R+R+  +       +
Sbjct: 210 Q-YHTLKRLLVRLRILVAAGTVWTRIPDDIPSIHPRTRHAAIPLIRQRIREAYSVFEKPE 268

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            D +   S  +D  +E+A+K FQ ++GL+  G+V  +T  AMN+     I+QL++ L R+
Sbjct: 269 YDIASDDSELYDDQLETAIKAFQYQYGLNTDGVVGKNTRRAMNMTAVEHIQQLRITLERL 328

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L  +    RY+LVNI   +L A+ N    L   ++VGR  R TP  +SRI+ ++ NPY
Sbjct: 329 RWLPRE-FSNRYILVNIAGFNLAAIRNNVRVLNMRIVVGRDYRSTPSFNSRISHLVLNPY 387

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV--FVEEVDWNSPE-PPNFIFRQ 300
           W +P SI  KD++   + +P Y     I +  +   E+    + +DW++      ++ RQ
Sbjct: 388 WNVPASIASKDLLPKQKHNPDYFASEGIRVFSDYHYELELDPDAIDWHAFSRSFPYVLRQ 447

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPGK NA+ + K  F +  + Y+HDTP   LF   +R  +SGC+R+   + L  ++L   
Sbjct: 448 DPGKRNALGTIKFMFPNPFSIYLHDTPSKSLFQRDIRTFSSGCIRLEKPMQLAEFVLG-- 505

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P++ + +I E + + KT  V L   +PV+ +Y++AW+     + F  D+YG D   +   
Sbjct: 506 PSFEKANILEKIDSGKTQTVHLPEPIPVYLLYLTAWNDGQGEVHFSADVYGRDKRALAYA 565

Query: 421 PLPEDHP 427
              +  P
Sbjct: 566 RWLQPEP 572


>gi|284007574|emb|CBA73124.1| conserved hypothetical protein [Arsenophonus nasoniae]
          Length = 563

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 17/384 (4%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HL 104
           S      ++   ++   I +  P  +  +       +  Y  +  +  WP++    L   
Sbjct: 178 SQWQTAINSK--QLASWIKTLAPQHA--SYLPMRTKMLAY--LADQQIWPKINTVSLLKP 231

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +S  +  L E L  +G L           +   +  AVK FQ  +GL+P G++ ++TL
Sbjct: 232 GQTSNDLVSLSEILTRNGLLTQDADTDNTRHYGGLLVDAVKQFQRMYGLEPDGIIGNATL 291

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +N     R   L +N+ R++ +  +  G   +LVNIPA +L    N ++ + S VIVG
Sbjct: 292 KWLNTSPTDRAGLLAINIQRLRIIPNE--GGSGILVNIPAYTLHFYLNNQLIIDSKVIVG 349

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--- 279
           R DR+TPI+ S +N ++ NP W +P S+++KD++   R+DP Y       ++    +   
Sbjct: 350 RPDRKTPIMSSELNSVVINPPWNVPTSMVRKDILPQARRDPGYFARRGFTVLSGWERNAY 409

Query: 280 EVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +    ++WN+       +  RQ PG  NA+   K    S +  Y+HDTP   LFN   R
Sbjct: 410 PIDPYSINWNAISSSSFPYRVRQAPGPSNALGRYKFNMPSSDAIYLHDTPNHSLFNRQNR 469

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV     L   LL    +W +  I+  ++  +T  + +   +P++  Y +AW 
Sbjct: 470 SISSGCVRVNKASVLASILLARA-SWDQKRIDGALQLGETRYINIPGRIPIYLYYQTAWV 528

Query: 398 PKDSIIQFRDDIYGLDNVHVGIIP 421
              +I  FRDDIYG DNV  G + 
Sbjct: 529 DNKNIANFRDDIYGYDNVIYGAMN 552


>gi|261246211|emb|CBG24015.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 613

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 119/442 (26%), Positives = 188/442 (42%), Gaps = 52/442 (11%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 -------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                                              + A+D  +  AVK FQ   GL   G
Sbjct: 277 DNTADSAVVSPSAVVDETSVAHDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADG 336

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L
Sbjct: 337 VIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVL 394

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  D  YL+ +   ++ 
Sbjct: 395 ASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDLGYLERHGYTVMR 454

Query: 276 EKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
               +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   L
Sbjct: 455 GWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTL 514

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+  
Sbjct: 515 FQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNLY 573

Query: 392 YISAWSPKDSIIQFRDDIYGLD 413
           Y++A+   D  +Q+R DIY  D
Sbjct: 574 YLTAFVGADGRMQYRTDIYNYD 595


>gi|291281926|ref|YP_003498744.1| putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|209774748|gb|ACI85686.1| putative amidase [Escherichia coli]
 gi|209774754|gb|ACI85689.1| putative amidase [Escherichia coli]
 gi|290761799|gb|ADD55760.1| Putative peptidoglycan binding domain protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|320642918|gb|EFX12119.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. 493-89]
 gi|320648375|gb|EFX17030.1| murein L,D-transpeptidase [Escherichia coli O157:H- str. H 2687]
 gi|320653691|gb|EFX21765.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659836|gb|EFX27392.1| murein L,D-transpeptidase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664305|gb|EFX31456.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. LSU-61]
          Length = 615

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 120/447 (26%), Positives = 186/447 (41%), Gaps = 59/447 (13%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     + +       S     +     S         D    ++   +    P   + 
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQQALDK--GQLPTFVAGLAPQHPQ- 216

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD------- 125
             A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD       
Sbjct: 217 -YAAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITL 273

Query: 126 -----------------------------------PSKGLSVAFDAYVESAVKLFQMRHG 150
                                              P+  +  A+D  +  AVK FQ   G
Sbjct: 274 PGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQG 333

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +N
Sbjct: 334 LGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQN 391

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ + 
Sbjct: 392 GNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHG 451

Query: 271 IHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
             ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDT
Sbjct: 452 YTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDT 511

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +
Sbjct: 512 PNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSI 570

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PV+  Y++A+   D   Q+R DIY  D
Sbjct: 571 PVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|89054636|ref|YP_510087.1| peptidoglycan binding domain-containing protein [Jannaschia sp.
           CCS1]
 gi|88864185|gb|ABD55062.1| Peptidoglycan-binding domain 1 [Jannaschia sp. CCS1]
          Length = 531

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 101/413 (24%), Positives = 186/413 (45%), Gaps = 18/413 (4%)

Query: 17  YLILPMGLSLVEKPIHAS-VLDEIINESYHSIVNDRF-DNFLARVDMGIDSDIPIISKET 74
            L L     +    +    ++ +I++        + F +   A     I +  P      
Sbjct: 120 LLFLQYAQDIHSGFLEPGDIVGDIVHTLPRRDPLELFTEFVSANPYEYIATLPPQHP--E 177

Query: 75  IAQTEKAIAFYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
             +  +A    + ++  GG+   +    L  G +  +V +LR RL+  G LD S      
Sbjct: 178 YTRLMRAKLHLERMIDEGGYGATVQAGSLTPGATGSAVVQLRNRLMAMGYLDRSATA--T 235

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +D  ++ AV  FQ+ +G++  G+    T+ A+N      + ++ + + R + L     G 
Sbjct: 236 YDTRLQQAVMEFQVDNGINADGIAGGDTIRAVNRSATEHLSEVILAMERQRWLNV-DRGP 294

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR--QTPILHSRINRIMFNPYWVIPRSII 251
           R++ VN+P      +++G+V   +  ++G  DR  +TP     +  ++ NP W +PRSI 
Sbjct: 295 RHIFVNLPDFHTRVIDDGEVTFITRSVIGSRDRDRRTPEFSDEMEHMVINPSWYVPRSIA 354

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMA 309
           +  + +++     +L+      +   G+ V    VDW+     NF F  RQ PG  NA+ 
Sbjct: 355 RGYIPSIMAGGANHLQ------LMSNGRPVNRGAVDWSRVSAGNFPFDLRQPPGPRNALG 408

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F ++ N Y+HD+P+  L  + VR  ++GCVR+ +  +L   LL            
Sbjct: 409 LVKFMFPNQWNIYLHDSPDQHLMTHDVRAYSAGCVRLDDPFELAYHLLAAQEDDPVTFFN 468

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            ++ + + T V L T +PVH VY ++W   +  + FR+DIYG +      I  
Sbjct: 469 TILNSSRETQVNLQTPLPVHIVYWTSWVDTEGRLNFRNDIYGRNAELRQAIQN 521


>gi|224582805|ref|YP_002636603.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467332|gb|ACN45162.1| hypothetical protein SPC_0996 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 639

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 185 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 242

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 243 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQCTGMLDGGPKIALPG 300

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 301 DNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 360

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 361 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 418

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 419 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 478

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 479 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 538

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+
Sbjct: 539 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVN 597

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+  DIY  D
Sbjct: 598 LYYLTAFVGADGRMQYHTDIYNYD 621


>gi|218700556|ref|YP_002408185.1| hypothetical protein ECIAI39_2222 [Escherichia coli IAI39]
 gi|218370542|emb|CAR18349.1| putative exported enzyme [Escherichia coli IAI39]
          Length = 615

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDTVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNNREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTCYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|290510667|ref|ZP_06550037.1| ycbB [Klebsiella sp. 1_1_55]
 gi|289777383|gb|EFD85381.1| ycbB [Klebsiella sp. 1_1_55]
          Length = 596

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 185/422 (43%), Gaps = 32/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S     +     S++N  +       + + I    P   +   
Sbjct: 164 YLHFISGIPTQGTRWLYSSTPYKMATPPLSVINQWQLALDNGSLPVFIAGLAPHHPQ--Y 221

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK------ 128
               +++     +     WP++     L  G  S  +  LRE L  +G LD +       
Sbjct: 222 EAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGALREILQRTGMLDNTANIVLPG 279

Query: 129 -------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                             +D  +   VK FQ   GL   G++  ST + +NV    R   
Sbjct: 280 DVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQSTRDWLNVSSAQRAGV 339

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L +N+ R++ L  +      ++VNIPA SL   ++G   L S VIVGR DR+TP++ S +
Sbjct: 340 LALNIQRLRLLPGKL--STGIMVNIPAFSLVYYQDGSQVLASRVIVGRPDRKTPMMSSAL 397

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP 293
           N ++ NP W +P ++ +KD++  +R +P YL+ +   ++        +    VDW++   
Sbjct: 398 NNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTITE 457

Query: 294 PNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
            N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV    +
Sbjct: 458 NNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKASE 517

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY 
Sbjct: 518 LANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDIYN 576

Query: 412 LD 413
            D
Sbjct: 577 YD 578


>gi|197266013|ref|ZP_03166087.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
 gi|197244268|gb|EDY26888.1| YcbB [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
          Length = 614

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 121/443 (27%), Positives = 191/443 (43%), Gaps = 53/443 (11%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 126 -------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                                          P+  +  A+D  +  AVK FQ   GL   
Sbjct: 277 DNTADSSVVSPSAVVDETSVAHDEPTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLGAD 336

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   
Sbjct: 337 GVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQV 394

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++
Sbjct: 395 LASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVM 454

Query: 275 DEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
                +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   
Sbjct: 455 RGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHT 514

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+ 
Sbjct: 515 LFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNL 573

Query: 391 VYISAWSPKDSIIQFRDDIYGLD 413
            Y++A+   D  +Q+R DIY  D
Sbjct: 574 YYLTAFVGADGRMQYRTDIYNYD 596


>gi|323138298|ref|ZP_08073369.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396381|gb|EFX98911.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 387

 Score =  359 bits (922), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 123/355 (34%), Positives = 198/355 (55%), Gaps = 5/355 (1%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
            P++  ET   T KA   Y  I+  GGWP++    L  G+   +V  LR RL    D   
Sbjct: 35  APVLQPETFFTTSKASERYAQIVDLGGWPKV-GVSLRPGSKGPAVSTLRRRLAAEDD-AV 92

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +     ++D  +  AVK FQ R GL  +G+V  +TL A++VP  +R RQL  +  R+   
Sbjct: 93  TDTNKQSWDPALTEAVKRFQFRMGLKQTGVVAGATLRALDVPATVRFRQLASSAQRLAG- 151

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           ++   G RY++VNIP+ +++AV+N +V  R   IVG  +  +P + +++  +  NP W +
Sbjct: 152 VDFPFGPRYIVVNIPSTAVDAVDNDRVVRRYAAIVGDPEHHSPEVQAKVVAVNINPTWTV 211

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SII+ ++   + +DP YL  + I +++ +G+EV    ++W S    N+  RQD G  N
Sbjct: 212 PTSIIKNEIAPKMLKDPSYLTRSRIRVLNGRGEEVDPRSINWASERAVNYTLRQDSGAHN 271

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT--PTWS 364
           ++ S +I   + ++ YMHDTP   LF +  RF + GCVRV+ ++DL  WLL  +  P  S
Sbjct: 272 SLGSIRISMPNPHSVYMHDTPSRNLFASDYRFLSHGCVRVQGVVDLAAWLLDGSNGPQLS 331

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
           +  I   + + +   V+L+  VPV +VY++ W+  D I+ FRDD+Y LD V    
Sbjct: 332 KEQINAKIASGEREEVRLSHPVPVVWVYMTGWASADGIVHFRDDVYHLDEVGGAA 386


>gi|205352202|ref|YP_002226003.1| hypothetical protein SG0937 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856386|ref|YP_002243037.1| hypothetical protein SEN0899 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|205271983|emb|CAR36827.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708189|emb|CAR32482.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326627246|gb|EGE33589.1| putative peptidoglycan binding domain-containing protein
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 616

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 126 ----------PSKGLSVA-----------------------FDAYVESAVKLFQMRHGLD 152
                     PS  +                          +D  +  AVK FQ   GL 
Sbjct: 277 DNTADSAVVSPSAVVDETSVAQPVDEQTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 336

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 337 ADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGN 394

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   
Sbjct: 395 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYT 454

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 455 VMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPN 514

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV
Sbjct: 515 HTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPV 573

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D  +Q+R DIY  D
Sbjct: 574 NLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|117920121|ref|YP_869313.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612453|gb|ABK47907.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 560

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 114/440 (25%), Positives = 210/440 (47%), Gaps = 25/440 (5%)

Query: 12  YCFFVYL---ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRF-----DNFLARVDMG 62
             F V L   I+   + L+   ++ S+L +  N +  H   +              V   
Sbjct: 118 SVFEVLLSDGIITYAIHLLNGKVNPSMLGKTWNYDETHLDFDTTLKQLEEHIKAHTVADA 177

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIIS 121
           I    P I      Q ++ +A Y+D+ +R  +  +P    +  G++S SVQ +  RL   
Sbjct: 178 IAGLAPKIEP--YHQLKQYLAQYKDLAARYPFSPIPYTEVIKPGSTSPSVQGIATRLTEL 235

Query: 122 GDLDPSKGLSV--------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           G L  S              +D+ +E+AV+ FQ  H L   G++ + T+ A+NVP    +
Sbjct: 236 GYLAASAPADNSAAVNQPLTYDSTLEAAVRQFQTDHSLKADGVIGAGTMAALNVPYSQLV 295

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            Q+++NL R + L    +   Y++VN+    L   ++  +  R+ +I+G+++ +TP+  S
Sbjct: 296 DQIRINLERARWL-SANLPTNYLIVNLAGYELLLFKDNSLSWRTDIIIGKINAKTPLFKS 354

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP-- 291
           ++  ++ NP W +PRSI   +++  LR++P YL+  +  +++  G  V    +DW+S   
Sbjct: 355 KLKYVVVNPTWTVPRSI-STEIINHLRKEPDYLQKKHFKVVEGSGTPVDASGIDWHSMTR 413

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           +   + F QDPG+ N++   K  F ++ + Y+HDTP   LF    R  + GC+RV++ + 
Sbjct: 414 KNFPYWFVQDPGEDNSLGLVKFIFPNQYSIYLHDTPAKSLFEQTDRAFSHGCIRVKDPLV 473

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LL     WS   +   +   KT  + L   + +  +Y +    KD  I+F +D+Y 
Sbjct: 474 LADKLLSANANWSSSTLSSKLSEGKTENLFLDEPLDILIMYWTVTL-KDGKIKFYNDVYK 532

Query: 412 LDNVHVGIIPLPEDHPIDSD 431
            D V +  +  P    + +D
Sbjct: 533 RDPVLIEALNRPTYEGVLAD 552


>gi|323174974|gb|EFZ60589.1| putative peptidoglycan binding domain protein [Escherichia coli
           LT-68]
          Length = 615

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 188/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q  G  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQASGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|15800786|ref|NP_286800.1| hypothetical protein Z1272 [Escherichia coli O157:H7 EDL933]
 gi|15830262|ref|NP_309035.1| hypothetical protein ECs1008 [Escherichia coli O157:H7 str. Sakai]
 gi|168751189|ref|ZP_02776211.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|168757018|ref|ZP_02782025.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|168762937|ref|ZP_02787944.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|168769921|ref|ZP_02794928.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|168787355|ref|ZP_02812362.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|195939660|ref|ZP_03085042.1| hypothetical protein EscherichcoliO157_25185 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208822650|ref|ZP_03262969.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|217326231|ref|ZP_03442315.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254792124|ref|YP_003076961.1| hypothetical protein ECSP_1029 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227428|ref|ZP_05941709.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256149|ref|ZP_05948682.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. FRIK966]
 gi|12514097|gb|AAG55410.1|AE005282_5 putative amidase [Escherichia coli O157:H7 str. EDL933]
 gi|13360467|dbj|BAB34431.1| putative amidase [Escherichia coli O157:H7 str. Sakai]
 gi|188014739|gb|EDU52861.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4113]
 gi|189355931|gb|EDU74350.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4401]
 gi|189361134|gb|EDU79553.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4486]
 gi|189366781|gb|EDU85197.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4501]
 gi|189372669|gb|EDU91085.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC869]
 gi|208738135|gb|EDZ85818.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209774750|gb|ACI85687.1| putative amidase [Escherichia coli]
 gi|209774752|gb|ACI85688.1| putative amidase [Escherichia coli]
 gi|209774756|gb|ACI85690.1| putative amidase [Escherichia coli]
 gi|217322452|gb|EEC30876.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254591524|gb|ACT70885.1| predicted carboxypeptidase [Escherichia coli O157:H7 str. TW14359]
 gi|320637793|gb|EFX07585.1| murein L,D-transpeptidase [Escherichia coli O157:H7 str. G5101]
 gi|326338180|gb|EGD62009.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1125]
          Length = 615

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 120/447 (26%), Positives = 186/447 (41%), Gaps = 59/447 (13%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     + +       S     +     S         D    ++   +    P   + 
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQQALDK--GQLPTFVAGLAPQHPQ- 216

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD------- 125
             A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD       
Sbjct: 217 -YAVMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITL 273

Query: 126 -----------------------------------PSKGLSVAFDAYVESAVKLFQMRHG 150
                                              P+  +  A+D  +  AVK FQ   G
Sbjct: 274 PGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQG 333

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +N
Sbjct: 334 LGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQN 391

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ + 
Sbjct: 392 GNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHG 451

Query: 271 IHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
             ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDT
Sbjct: 452 YTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDT 511

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +
Sbjct: 512 PNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSI 570

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PV+  Y++A+   D   Q+R DIY  D
Sbjct: 571 PVNLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|194434397|ref|ZP_03066660.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|194417381|gb|EDX33487.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1012]
 gi|320182006|gb|EFW56911.1| L,D-transpeptidase YcbB [Shigella boydii ATCC 9905]
          Length = 615

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPD 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYTYD 597


>gi|198244692|ref|YP_002214919.1| hypothetical protein SeD_A1060 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939208|gb|ACH76541.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326622672|gb|EGE29017.1| YcbB [Salmonella enterica subsp. enterica serovar Dublin str. 3246]
          Length = 616

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 191/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 277 DNTADSAVVSPSAVVDEPSVAQPVDEQTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 336

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 337 ADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGN 394

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   
Sbjct: 395 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYT 454

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 455 VMRGWNSKEAIDPWQVDWTTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPN 514

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV
Sbjct: 515 HTLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPV 573

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D  +Q+R DIY  D
Sbjct: 574 NLYYLTAFVGADGRMQYRTDIYNYD 598


>gi|126666378|ref|ZP_01737357.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
 gi|126629179|gb|EAZ99797.1| hypothetical protein MELB17_12356 [Marinobacter sp. ELB17]
          Length = 566

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 116/417 (27%), Positives = 186/417 (44%), Gaps = 25/417 (5%)

Query: 29  KPIHASVLDEIINESY--HSIVNDRFDNFLARVDMGIDSDIPIIS-----KETIAQTEKA 81
             +    +D    +      ++    D       +         S          +    
Sbjct: 125 THLQRGKVDPYQIDPQWEIPVMARALDYQGISEAVDAQRFEQAFSLARPYPAPYQRLRAG 184

Query: 82  IAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA------ 133
           +A+Y++I   GGW +LP RP  L  G+    V  LR+RL + G L     +S        
Sbjct: 185 LAYYRNIQLEGGWQQLPQRPQSLRPGDVDADVPLLRQRLAMIGGLGLQNAMSAVQPEEQT 244

Query: 134 -----FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                +D  +  AV+LFQ  H L+  G+V   T  A NV VD RI Q++ NL R + LL 
Sbjct: 245 ATLLEYDEAMVGAVRLFQRHHLLEADGIVGQQTRNAFNVSVDERINQIRANLERARWLL- 303

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++LV+I    +          RS ++VG+  R TP L S I  +  NP W +P 
Sbjct: 304 HGEASAFILVDIAGYRISYFRPNGEIWRSRIVVGQPYRSTPSLRSEITHLTVNPTWTVPP 363

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I ++D +  +R D  YL   N+ ++D +G+ +  +++DW    P + + RQ PG +NA+
Sbjct: 364 TIYREDSLPKIRDDIGYLYRQNMSVLDLRGQRLDPQQIDWW--NPGSIMLRQGPGPMNAL 421

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
               + F + +  Y+HDTP   LF    R  +SGC+RV+ I +L   L  DT   +   +
Sbjct: 422 GQLVLRFPNNHLVYLHDTPAQALFGRQQRAFSSGCIRVQGITELAQLLFDDT--DTAADV 479

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
           + ++ T  T  +KL   +PV   Y +    +D  + FR DIY  D      +  P  
Sbjct: 480 KALIATGDTRNIKLRRTMPVILHYWTVHPGEDGELVFRPDIYQQDARLQKALDQPLG 536


>gi|62179522|ref|YP_215939.1| hypothetical protein SC0952 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127155|gb|AAX64858.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713990|gb|EFZ05561.1| N-6 adenine-specific DNA methylase, conserved site [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
          Length = 615

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 121/444 (27%), Positives = 189/444 (42%), Gaps = 54/444 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                            S   + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +    PV+
Sbjct: 515 NLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNTPVN 573

Query: 390 FVYISAWSPKDSIIQFRDDIYGLD 413
             Y++A+   D  +Q+R DIY  D
Sbjct: 574 LYYLTAFVGADGRMQYRTDIYNYD 597


>gi|218548441|ref|YP_002382232.1| hypothetical protein EFER_1069 [Escherichia fergusonii ATCC 35469]
 gi|218355982|emb|CAQ88598.1| putative exported enzyme [Escherichia fergusonii ATCC 35469]
 gi|324113744|gb|EGC07719.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325496863|gb|EGC94722.1| hypothetical protein ECD227_0960 [Escherichia fergusonii ECD227]
          Length = 615

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFTANIPVKGTRWLYSSKPYALATPPLSVINQWQVALDNGQLPAFVAGLAPKHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
               +++     +     WP+L  +  L  G  S  V  LRE L  +G L+    ++   
Sbjct: 218 TAMHESLLTL--LADTKPWPQLTGKTTLRPGQWSNDVPALREILQRTGMLEGGPKIALPG 275

Query: 132 ---------------------------------------VAFDAYVESAVKLFQMRHGLD 152
                                                   A+D  +  AVK FQ   GL 
Sbjct: 276 DETPAEAVVSPSAVAVETSETKPLDKQTEPRKKAAPAVRAAYDKELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   ++G 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQDGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 454 VMRGWNSKEAIDPWQVDWSTITASNLPFRFQQAPGARNSLGRYKFNMPSTDAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASELANMLLQDA-GWNDKRISDALKQGDTRYVNIRQTIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|170769178|ref|ZP_02903631.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
 gi|170121830|gb|EDS90761.1| putative peptidoglycan binding domain [Escherichia albertii
           TW07627]
          Length = 615

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 117/445 (26%), Positives = 193/445 (43%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQVALDNGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G L+         
Sbjct: 218 AAMHESLLAL--LSDNKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLEGGPKIALPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+++ + +AVK FQ   GL 
Sbjct: 276 DDTQPDGAVSPSAAAVETAGTQPINRQTTAHSKPAPAVRAAYNSELVNAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGTIGPATRDWLNVTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++     +  +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSKEAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASELANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|332095888|gb|EGJ00895.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           155-74]
          Length = 611

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPD 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|187776221|ref|ZP_02801228.2| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208809460|ref|ZP_03251797.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815467|ref|ZP_03256646.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209399966|ref|YP_002269597.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|187768375|gb|EDU32219.1| putative peptidoglycan binding domain [Escherichia coli O157:H7
           str. EC4196]
 gi|208729261|gb|EDZ78862.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732115|gb|EDZ80803.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|209161366|gb|ACI38799.1| putative peptidoglycan binding domain protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|320192589|gb|EFW67230.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. EC1212]
 gi|326346157|gb|EGD69895.1| L,D-transpeptidase YcbB [Escherichia coli O157:H7 str. 1044]
          Length = 611

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 120/447 (26%), Positives = 186/447 (41%), Gaps = 59/447 (13%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     + +       S     +     S         D    ++   +    P   + 
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQQALDK--GQLPTFVAGLAPQHPQ- 212

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD------- 125
             A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD       
Sbjct: 213 -YAVMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITL 269

Query: 126 -----------------------------------PSKGLSVAFDAYVESAVKLFQMRHG 150
                                              P+  +  A+D  +  AVK FQ   G
Sbjct: 270 PGDDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQG 329

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L   G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +N
Sbjct: 330 LGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQN 387

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ + 
Sbjct: 388 GNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHG 447

Query: 271 IHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDT 326
             ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDT
Sbjct: 448 YTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDT 507

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +
Sbjct: 508 PNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSI 566

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLD 413
           PV+  Y++A+   D   Q+R DIY  D
Sbjct: 567 PVNLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|83593271|ref|YP_427023.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
 gi|83576185|gb|ABC22736.1| ErfK/YbiS/YcfS/YnhG [Rhodospirillum rubrum ATCC 11170]
          Length = 599

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 177/431 (41%), Gaps = 19/431 (4%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD--MGIDSDIPIISK 72
           F+       L    + +  S    ++      I  D   N  A  D  + + +  P   +
Sbjct: 168 FLLFATDRLLGQSRRALPFSERLALLAREEGVIPEDLLANAGAAPDFGLFLATLAPPTPQ 227

Query: 73  ETIAQTEKAIAFYQDILSRGGWPE--LPIRPLHLGNSSVSVQRLRERLIISGDLDPS--- 127
                  + +  YQ +   GGWP        +  G+    +  +R RL   G +  S   
Sbjct: 228 --YDLLRQGLVRYQALARDGGWPTDLADGASIKPGDRDPRLPEMRRRLAAEGLVVGSDPT 285

Query: 128 ---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                 +   D ++  AV++FQ  HGL   G++   TL  MN     RI Q++V L R +
Sbjct: 286 FIGPPDAELLDDFLVEAVRIFQAAHGLSADGVIGRGTLVDMNTTPAQRITQIRVALERWR 345

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L    +G  ++LVN+P   L   E     L   V VGR D +TP+    +  + FNPYW
Sbjct: 346 LLPRA-LGQTHLLVNVPQYQLYLNEGRTTVLSMRVAVGRQDFETPLFSDTLRYMEFNPYW 404

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHM----IDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            +P SI Q +++    ++  YL      +    ++     V  E VDW +    ++  RQ
Sbjct: 405 NVPISIAQAEVIPKQIENSAYLAKKGFTVLPRGVEGWDDGVGHESVDWKADAARSYRLRQ 464

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           DPG  N + + K  F +    Y+HDT    +F+   R  + GCVRV+    L  ++L+  
Sbjct: 465 DPGPANPLGTVKFMFPNEYAVYLHDTNSRGVFDRSARAVSHGCVRVQEPALLANYILERF 524

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            T                 V+L   +P+H VYI+AW  +   + F  DIY  D      +
Sbjct: 525 -TDRIGKTAADFSGPTPKVVRLNRPLPIHLVYITAWGGEGGKVAFVRDIYAKDRAIRQAL 583

Query: 421 PLPEDHPIDSD 431
                 P D+D
Sbjct: 584 HDTAASP-DAD 593


>gi|323190745|gb|EFZ76014.1| putative peptidoglycan binding domain protein [Escherichia coli
           RN587/1]
          Length = 615

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 191/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPVVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP+YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPRYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 LMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|114332479|ref|YP_748701.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           eutropha C91]
 gi|114309493|gb|ABI60736.1| Peptidoglycan-binding domain 1 protein [Nitrosomonas eutropha C91]
          Length = 561

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 202/416 (48%), Gaps = 21/416 (5%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFD----NFLARVDMGIDSDIPIISKET-- 74
              L  +   +H+  L   + +    I   +FD       A     ++     +  +   
Sbjct: 145 TRSLLALAHDLHSGRLTASLADPDWHIPQQQFDPVTFLQQALTSGKLEQAFADLPPDIPQ 204

Query: 75  IAQTEKAIAFYQDILSRGG-WPELPIRP--LHLGNSSVSVQRLRERLIIS------GDLD 125
               ++ +  ++ +++    W  +P     +       S+ ++R+R+  +       +  
Sbjct: 205 YRSLKQLLNKFRTLVAADTIWTRIPEETSLIRPHTRHTSIPQVRQRIQEAYHIFEKPEYG 264

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  +D  +E AVK FQ +HGL+  G++  +T  AMN+     ++QL++ L R++ 
Sbjct: 265 IVVSDSEFYDDQLEIAVKAFQRQHGLNADGIIGKNTRRAMNITPGEHVQQLRITLERLRW 324

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  + +G RY+LVNI   +L AV+     L   ++VGR  R TP  +S+I  ++ NPYW 
Sbjct: 325 LPRK-LGDRYILVNIAGFNLVAVQENVRVLDMKIVVGRDYRSTPSFNSKITHLVLNPYWN 383

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPP-NFIFRQDP 302
           +P SI +KD++   R +P Y     I +  +     E+  + +DW+S      +I RQDP
Sbjct: 384 VPASIARKDLLPKQRYNPDYFASEGIRVFSDYKYESELNPDFIDWHSTSRSLPYILRQDP 443

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+ + K  F +  + Y+HDTP   LF   +R  +SGC+R+   + L  ++L  +  
Sbjct: 444 GRRNALGTIKFMFPNPFSIYLHDTPSKYLFQKDIRTFSSGCIRLEKPLQLAEFVLGQS-- 501

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           + +  I E + + KT  V L  ++PV+ +Y++AWS +   + F  D+YG D   + 
Sbjct: 502 FEQADIAEKISSGKTQTVHLPEKIPVYLLYLTAWSDEQGEVYFSSDVYGRDKRALA 557


>gi|311280161|ref|YP_003942392.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749356|gb|ADO49108.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 602

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 124/444 (27%), Positives = 194/444 (43%), Gaps = 39/444 (8%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     ++L       S     ++    S++N  +       +   I    P   +   
Sbjct: 164 YLHFISNIALQGNRWLYSDKPYGMSTPPLSVINQWQLALDNGSLPRFIAGLAPQHPQ--Y 221

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +A+     +     WP++     L+ G  S  V  LRE L  +G LD         
Sbjct: 222 AAMHQALLAL--VTDSRPWPQMASSGKLNPGQWSKDVPALREILQRTGMLDNTPNIALPG 279

Query: 126 ----------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                            +      +D  +  AVK FQ   GL   G++  ST +A+NV  
Sbjct: 280 DSGAVSPSAAPVKKVKAASSAPAVYDRQLVEAVKRFQASQGLGADGVIGQSTRDALNVSS 339

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R   L +N+ R++ L  +      ++VNIPA SL   +NG   L S VIVGR DR+TP
Sbjct: 340 AQRAGVLALNIQRLRLLPGKL--STGIMVNIPAYSLVYYQNGSQVLASRVIVGRPDRKTP 397

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVD 287
           ++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++        +    VD
Sbjct: 398 MMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVLRGWNSKETINPYHVD 457

Query: 288 WNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W++  P N  FR  Q PG  N++   K    S    Y+HDTP   LF    R  +SGCVR
Sbjct: 458 WSTITPSNLPFRFQQAPGAKNSLGRYKFNMPSSEAIYLHDTPNHNLFQKDTRALSSGCVR 517

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+
Sbjct: 518 VNKAPELASMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVGPDGRTQY 576

Query: 406 RDDIYGLDNVH-VGIIPLPEDHPI 428
           R DIY  D +   G   LP+   +
Sbjct: 577 RTDIYNYDLMARSGAQILPKAEQL 600


>gi|323976688|gb|EGB71776.1| ykud domain-containing protein [Escherichia coli TW10509]
          Length = 615

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  +  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDIPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A++  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTAETAETKAMDQQTTSRSKPAPAVRAAYNNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|320196581|gb|EFW71204.1| L,D-transpeptidase YcbB [Escherichia coli WV_060327]
          Length = 611

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A++  +  AVK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPAPVVRAAYENELVEAVKRFQTWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADGRTQYRTDIYNYD 593


>gi|51244920|ref|YP_064804.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
 gi|50875957|emb|CAG35797.1| hypothetical protein DP1068 [Desulfotalea psychrophila LSv54]
          Length = 561

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 112/377 (29%), Positives = 187/377 (49%), Gaps = 13/377 (3%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQ 112
                +D  +    P          + A+A+Y++    G WP++ +   LH G+    + 
Sbjct: 186 LATRDLDRFLAGLPPQH--LHYKALKTALAYYRNFAKNGDWPKVAMGVNLHPGDREKRII 243

Query: 113 RLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            +R+RL  +G    +   S    +D  +E AV  FQ  HGL   G++  +T++A+N+ + 
Sbjct: 244 SIRKRLQFAGPFLEAPRDSDLSQYDLILEEAVLSFQQLHGLQTDGIIGRNTVDALNISIA 303

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            +I  +++N+MR +      +G RY+LVNI + +L+A  +  V L   +IVG  + +TP+
Sbjct: 304 EKIEIIRLNMMRWRWQ-AHDLGKRYLLVNIASFNLKAFRDQDVVLDMPIIVGTEENETPV 362

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVD 287
             + I  I FNP+W IP SI + +M+  LR++  YL D  I +     +   E+    +D
Sbjct: 363 FSAWIKYIDFNPFWNIPTSIARNEMLPALRKNNYYLIDQRISLFSNWQQSAVELDSTAID 422

Query: 288 WNSPEPPN---FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           W +  P     +  RQDPG +NA+   K  F +  + YMHDTP   LF+   R  + GC+
Sbjct: 423 WEAITPSEISAYKLRQDPGPLNALGRIKFIFPNSYSVYMHDTPGRHLFSLSKRSFSHGCI 482

Query: 345 RVRNIIDLDVWLLKDT-PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           RV + + L ++LL++    W    I+E+ +  +   + L   V VH  Y +AW  K   I
Sbjct: 483 RVSDPLSLAIFLLENQTDGWDTEKIKEIYEQEERKVIILTLSVAVHITYGTAWVDKGGEI 542

Query: 404 QFRDDIYGLDNVHVGII 420
            F  DIY  D      +
Sbjct: 543 HFSRDIYLRDERLRNAL 559


>gi|82777551|ref|YP_403900.1| hypothetical protein SDY_2332 [Shigella dysenteriae Sd197]
 gi|81241699|gb|ABB62409.1| putative amidase [Shigella dysenteriae Sd197]
          Length = 615

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTHWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWKVPPTLARKDILPKVRNDPGYLEIHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|121592583|ref|YP_984479.1| peptidoglycan-binding domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604663|gb|ABM40403.1| Peptidoglycan-binding domain 1 protein [Acidovorax sp. JS42]
          Length = 533

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 118/423 (27%), Positives = 177/423 (41%), Gaps = 20/423 (4%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIA 83
           L    I  + L+E  + S     + R     A  D  I                    +A
Sbjct: 100 LHGGRIDPARLNERYDHSRRPQPDLRAALQTALADGQIQQARDAAIPRVPMYPALRALLA 159

Query: 84  FYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-------KGLSV 132
            Y+ + +   W    P LP R L  G     +  L ERL+  GDL P             
Sbjct: 160 QYRAMGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASAPA 219

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   +  AV  FQ RHGL+  G++ ++TL A+NVP   R  Q+ + + R++     + G
Sbjct: 220 QYAPALVEAVTAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLRWTPVLQ-G 278

Query: 193 LRYVLVNIPAASLEAVENG----KVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIP 247
            R + VN+P   L A E       + L   VIVG+  D +TP+    +  I F+PYW IP
Sbjct: 279 PRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPYWNIP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + +++  LR+DP YL    +  +   G           +        RQ PG +NA
Sbjct: 339 PSIARGEIVPRLRRDPGYLARQGMEFVSAAGVSTDATPEMLGAVLAGQARIRQRPGPLNA 398

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW+   
Sbjct: 399 LGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVEEPVALAQFVLQDDPTWTVER 458

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           I   +   K   V+L   VPV   +I+     D    F  D+YG D     ++      P
Sbjct: 459 IRAAMAQPKPVFVRLPHPVPVIITHITVVVQ-DGRPHFYGDLYGHDRKLASLLRQHSAKP 517

Query: 428 IDS 430
            D+
Sbjct: 518 YDA 520


>gi|146302694|ref|YP_001197285.1| hypothetical protein Fjoh_4967 [Flavobacterium johnsoniae UW101]
 gi|146157112|gb|ABQ07966.1| hypothetical lipoprotein [Flavobacterium johnsoniae UW101]
          Length = 523

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 109/421 (25%), Positives = 192/421 (45%), Gaps = 29/421 (6%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K+N  L    +Y      +         S+  E +            D+   +  +  D 
Sbjct: 125 KVNTDLMITNLYFYYAEKVY-RGFDEKTSISLEWLLPRKKLNYQVFSDSIFEKSTINDDK 183

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIIS 121
              + S+    +   A+  Y++I   GGW  +      + L LG+SS  V ++RERL I+
Sbjct: 184 KSKMFSQ--YYKLRDALKRYREIEKNGGWKTIEIDDAYKSLKLGDSSPIVSQIRERLFIT 241

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
            D+      S   D+ +   +K +++ HG  P   +    +  +N+PV  RI+ + VN+ 
Sbjct: 242 QDIKEDNK-SAVCDSTLIKGLKSYELHHGFAPKNTILPEHITDLNIPVSDRIKTIIVNME 300

Query: 182 RIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           R + +  + + G +Y+ VNIP   L  + + ++   S V+VG+   +T I    ++ I+F
Sbjct: 301 RCRWIDPKLEKGQQYIEVNIPEFKLYLIRDRQIAFTSPVVVGKAMTKTVIFSGTMSNIVF 360

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +PYW +P SII K++   + ++  YL   N+                WN     N   RQ
Sbjct: 361 SPYWNVPPSIIAKEIKPGMAKNKNYLAQKNLE---------------WN-----NGAVRQ 400

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PGK N++   K  F + +N Y+HDTP   LF    R  + GCVRV    +L + +LK+ 
Sbjct: 401 LPGKNNSLGLVKFLFPNSSNIYLHDTPSKSLFERESRAFSHGCVRVAKPRELAIEILKED 460

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           P W+   I++ +   K +   +  + PV+  Y +AW  ++  + F  DIY  D   + ++
Sbjct: 461 PKWTEARIDKAMHAGKESWYTIKKKFPVYIGYFTAWVDREGNLNFYKDIYQRDESLLKLL 520

Query: 421 P 421
            
Sbjct: 521 T 521


>gi|300022492|ref|YP_003755103.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524313|gb|ADJ22782.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 452

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 134/388 (34%), Positives = 201/388 (51%), Gaps = 7/388 (1%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
           D+I             +     +        P  S   I     AI  YQ I+  GGWP 
Sbjct: 45  DQIQGSLSGGSAEPAPERKKEPLQDLRPDSTPWRSDAMINAISAAIERYQSIVDSGGWPV 104

Query: 97  LPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG--LSVAFDAYVESAVKLFQMRHGLDP 153
           +P   +   G     V  LR+RL ISGD+        S  FD+ +E  VK FQ RHG+  
Sbjct: 105 VPTGRMMRSGEDDPRVPILRKRLRISGDMPAKGSYYDSETFDSELEEGVKRFQRRHGIRI 164

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +G ++ S    +N     R+ QL++NL R++ L+   +  RYVLVN+PA  LEAV+  +V
Sbjct: 165 TGRIEQSVYPVLNTTAAERLAQLKLNLQRVQALM-HGIEDRYVLVNVPAFQLEAVDKYEV 223

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            LR  VIVGR  RQTP + + I  + F PYW +P S+   D++  L+Q+P YL D  I +
Sbjct: 224 QLRHRVIVGRPQRQTPDVRAMIKALNFFPYWRVPDSVATLDLVPRLKQEPGYLADEGIRV 283

Query: 274 IDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
            +   G E+    VDW++P+  ++ F+QDPG  NA+   +I+  +    YMHDTP   LF
Sbjct: 284 YNGVNGPELNPATVDWSAPQVASYKFKQDPGDKNALGLLRIDMSNEFGVYMHDTPMKNLF 343

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVVKTRKTTPVKLATEVPVHFV 391
               R  ++GCVRV+N+ DL  W+  + P W +   + + +   +   +KL   +PV+F 
Sbjct: 344 GQQSRPFSAGCVRVQNVFDLGDWIAHNEPGWEQPGRVRDTLAAGQPMELKLMHPIPVYFA 403

Query: 392 YISAWSPK-DSIIQFRDDIYGLDNVHVG 418
           Y +AW+   +  ++FR DIYG D   + 
Sbjct: 404 YFTAWAEPSNGRVEFRPDIYGRDGAALQ 431


>gi|218688768|ref|YP_002396980.1| hypothetical protein ECED1_0955 [Escherichia coli ED1a]
 gi|218426332|emb|CAR07157.1| putative exported enzyme [Escherichia coli ED1a]
          Length = 615

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 118/445 (26%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLS--- 131
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD    ++   
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGSKITLPG 275

Query: 132 ---------------------------------------VAFDAYVESAVKLFQMRHGLD 152
                                                   A++  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTIETAETKPMDKQTTSRSKPVPVVRAAYENELVEAVKRFQTWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADGRTQYRTDIYNYD 597


>gi|309787798|ref|ZP_07682408.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
 gi|308924197|gb|EFP69694.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           1617]
          Length = 610

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 155 YLHFIANIPVKGTHWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 212

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 213 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 270

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 271 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 330

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 331 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 388

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 389 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWKVPPTLARKDILPKVRNDPGYLEIHGYT 448

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 449 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 508

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 509 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 567

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 568 NLYYLTAFVGADGRTQYRTDIYNYD 592


>gi|183598377|ref|ZP_02959870.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
 gi|188020553|gb|EDU58593.1| hypothetical protein PROSTU_01769 [Providencia stuartii ATCC 25827]
          Length = 575

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 123/427 (28%), Positives = 182/427 (42%), Gaps = 30/427 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+S   +          I       +    D     R++  +    P  S    
Sbjct: 143 YLQYLSGVSANGQFWLYRKQPYKIAAPTAEQMKPWLDAAAENRLNEWVKLQSPQHS--LY 200

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-- 133
               + +   Q  +   G   +  + L  G SS  V  LRE L   G LD +   +    
Sbjct: 201 QPMREEMLK-QLKMDDDGLALVDTKTLKPGQSSDDVIALREILYRQGLLDETAINTELDA 259

Query: 134 ----------------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                           +   +  AVK FQ R+GL+  GMV   T   +N+    +   + 
Sbjct: 260 AAPDAEIAKATAQARLYSDELVEAVKKFQQRYGLEADGMVGKGTKVWLNMKPQQKAGLMA 319

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ + E       +LVNIPA SL    N +V L S VIVGR DR+TPI+ S +N 
Sbjct: 320 LNIQRLRIIPEN--NGTGILVNIPAFSLNFFLNDEVILDSKVIVGRPDRKTPIMSSALNN 377

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP- 293
           ++ NP W +P S+ +KD+    +QDP Y       +    G+   E+    ++W+   P 
Sbjct: 378 VVINPPWSVPTSMARKDIAPRGKQDPSYFSRKGYTVYSGWGEDSFEIDPYSINWDVITPA 437

Query: 294 -PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ PG  N++   K    S +  Y+HDTP   LFN   R  +SGCVRV    +L
Sbjct: 438 NFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNRSARAISSGCVRVNKASEL 497

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL D   W +  I+  VK   T  V +   +PV+  Y +AW  K+   Q+R DIY  
Sbjct: 498 ASILLGDA-GWEQKRIDGAVKAGSTRYVNIPDRIPVYLYYQTAWVDKEQQPQYRADIYQY 556

Query: 413 DNVHVGI 419
           DN     
Sbjct: 557 DNSINNA 563


>gi|157146384|ref|YP_001453703.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
 gi|157083589|gb|ABV13267.1| hypothetical protein CKO_02143 [Citrobacter koseri ATCC BAA-895]
          Length = 620

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 189/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   + S  P   +   
Sbjct: 165 YLHFIANIPVKGTRWLYSDKPYALATPPLSVINQWQIALDNGQLTTFVASLAPQHPQ--Y 222

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A    ++     +     WP+L     L  G  S  V  LRE L  +G L+         
Sbjct: 223 AALHDSLKKL--VSDARPWPQLTSTATLRPGQWSNDVPALREILQRTGMLEGGPKIALPG 280

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 281 DDVAADVVVSPSAVAVEPAAVKPVARQSTQRSQPAPAVRAAYDRELVDAVKRFQTWQGLG 340

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G V  +T E +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 341 ADGAVGPATREWLNVTPAQRAGVLALNIQRLRLLPGEL--STGIMVNIPAYSLVYYQNGN 398

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   
Sbjct: 399 QVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYT 458

Query: 273 MIDEKGK--EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++  P N  FR  Q PG  N++   K    S +  Y+HDTP 
Sbjct: 459 VMRGWNSKETINPWQVDWSTITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPN 518

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 519 HNLFQKDTRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPV 577

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 578 NLYYLTAFVGADGRTQYRTDIYNYD 602


>gi|326795030|ref|YP_004312850.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
 gi|326545794|gb|ADZ91014.1| ErfK/YbiS/YcfS/YnhG family protein [Marinomonas mediterranea MMB-1]
          Length = 562

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 98/426 (23%), Positives = 199/426 (46%), Gaps = 17/426 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           +I  + LS     +     + ++ +      +   D  +         + + +P+++   
Sbjct: 140 VIATIALSSYAHDLSNGRYEPLLIDPNWQLDAPSEDWKNILWLSSATDMVNSLPLLAPRH 199

Query: 75  --IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL--DPSKG 129
                 +K + +YQ++  +    ++ +  PL LG+    V +LR RLI  GD+     K 
Sbjct: 200 PHYQILQKWLVYYQELADKEPDIKVNVGVPLTLGDEGPRVAQLRARLIQLGDIRFSTRKV 259

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               FD  ++ A+  FQ RH L   G   S T++ +N+P+  R++Q+  NL R + L  +
Sbjct: 260 NEDQFDERLKDALINFQRRHHLTADGAAGSKTIQTLNIPLKERVKQINYNLERWRWLPSR 319

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
               R + V++    +    NG+      V++G+  R+TP+ + ++  ++ NP W +P  
Sbjct: 320 LEADR-IWVDLTDYKVHTHLNGETQ-SMRVVIGKPARKTPVFYGKMTYMVTNPTWRVPHR 377

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFRQDPGK 304
           I +++++  ++++P YL  +   +        K++    ++W + +     + F Q+   
Sbjct: 378 IARENLLPKIKENPDYLAKHGYKVFANWSASAKQLDPTTINWKAIDQSKLSYRFEQNADD 437

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++N+ Y+HDTP   LF  V R  +SGCVR+ +  +    LL+ +   S
Sbjct: 438 GNALGLYKFMFPNKNDIYLHDTPAKHLFKEVDRAYSSGCVRLEHPDEFAELLLEGS--DS 495

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
              + E + + +T  + L   +PV+ VY +     + + +FR+D+Y  D +    +    
Sbjct: 496 EDKMNEAMNSGETKVITLPQYLPVYLVYFTVVPNDNGMPEFRNDVYKRDKLMEEAMGYAP 555

Query: 425 DHPIDS 430
             P DS
Sbjct: 556 FSPSDS 561


>gi|91227204|ref|ZP_01261663.1| putative amidase [Vibrio alginolyticus 12G01]
 gi|91188732|gb|EAS75020.1| putative amidase [Vibrio alginolyticus 12G01]
          Length = 513

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 173/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    L + +      +  +D F +  + +        P   +  +A     
Sbjct: 143 TLSVLSNEITVGKLGQFLASLRSPLQTDDAFYSAYSSLSEHSQYQYPAYQQTGLA----- 197

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ I G D+     ++  +D  +E 
Sbjct: 198 ---------------------RVGDILENRPLLIERMEIVGVDVSYLDLVTEEYDEQLEL 236

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ  HGL   G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 237 AIKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKER--DNVVFVNV 294

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P +I+ KD++  ++
Sbjct: 295 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMSVALDSVILNPTWNVPWTIMVKDIIPKVK 354

Query: 261 QDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I      + +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 355 RNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLQNALGLYKFNMP 414

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV +   L   L K      R   +     R 
Sbjct: 415 NPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESSRRS 474

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 475 NTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 510


>gi|240141625|ref|YP_002966105.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
 gi|240011602|gb|ACS42828.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens AM1]
          Length = 586

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTGDLP 186

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R+  
Sbjct: 187 ADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQRLMG 246

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP W 
Sbjct: 247 -SNFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNPTWT 305

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD G  
Sbjct: 306 VPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDSGLD 365

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T     
Sbjct: 366 NSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNG 425

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 426 PGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|304310214|ref|YP_003809812.1| hypothetical protein HDN1F_05650 [gamma proteobacterium HdN1]
 gi|301795947|emb|CBL44148.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 560

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 179/382 (46%), Gaps = 12/382 (3%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLH 103
           S+V   F+      D    +  P          + A+A Y+++ +      LP   + L 
Sbjct: 172 SLVKQAFNGI--SPDQAFRNARPKF--VLYDHLKNALAHYRELAAHRKGISLPSLPKSLK 227

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   +  L + L   GD   +   +  +   + + VK FQ  HGL   G++  ST  
Sbjct: 228 PGDTWSGIPALADGLRYLGDFTGAPPKNNRYTHDLVAGVKHFQGGHGLGVDGIIGQSTWS 287

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIV 221
           A++VP  +R+RQ+++++ R++ L EQ    R ++VNIP   L A         L   V+V
Sbjct: 288 ALSVPFSVRVRQIELSMERMRWLSEQMADERAIVVNIPQFQLWAFPGKTQASSLSMNVVV 347

Query: 222 GRV-DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           G+     TPIL + +  ++FNPYW +P SI +K+M+  LR++P+YL   N+ M+   G+ 
Sbjct: 348 GKSVGNSTPILLNDVKSVVFNPYWNVPSSITRKEMLPKLRENPEYLVSQNLEMV-GNGEV 406

Query: 281 VF--VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +          +     +  RQ PG  NA+   K EF + +  YMHDTP    F+   R 
Sbjct: 407 IATAPTPEQIEAISKGIYRLRQRPGPGNALGRVKFEFPNSDAIYMHDTPNRGAFSRSRRD 466

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GC+R+ +   +  +LL   P W +  + E +K+ +   V L   VPV   Y +A   
Sbjct: 467 FSHGCIRLSDPEKMADFLLTGQPGWDKKRVSEAMKSDERRTVTLRNPVPVLIFYTTAMVD 526

Query: 399 KDSIIQFRDDIYGLDNVHVGII 420
                   +DIYG D+     +
Sbjct: 527 STGRTVLLEDIYGYDSQLERAL 548


>gi|254564132|ref|YP_003071227.1| peptidoglycan-binding protein [Methylobacterium extorquens DM4]
 gi|254271410|emb|CAX27423.1| putative peptidoglycan-binding protein (N-terminal domain)
           [Methylobacterium extorquens DM4]
          Length = 586

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTGDLP 186

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R+  
Sbjct: 187 ADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQRLMG 246

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP W 
Sbjct: 247 -SSFGFGERYVTVNIPSATVEAVENGTVTRRYVAVVGSPDKQTPAVETRITDVNLNPTWT 305

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD G  
Sbjct: 306 VPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDSGLD 365

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T     
Sbjct: 366 NSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNG 425

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 426 PGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|333001241|gb|EGK20809.1| putative peptidoglycan binding domain protein [Shigella flexneri
           VA-6]
          Length = 615

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|24112334|ref|NP_706844.1| hypothetical protein SF0922 [Shigella flexneri 2a str. 301]
 gi|24051196|gb|AAN42551.1| putative amidase [Shigella flexneri 2a str. 301]
 gi|332759013|gb|EGJ89323.1| putative peptidoglycan binding domain protein [Shigella flexneri
           4343-70]
 gi|332760103|gb|EGJ90401.1| putative peptidoglycan binding domain protein [Shigella flexneri
           2747-71]
 gi|332767712|gb|EGJ97903.1| L,D-transpeptidase YcbB [Shigella flexneri 2930-71]
 gi|333006182|gb|EGK25691.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-218]
          Length = 615

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   EVDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|113866566|ref|YP_725055.1| hypothetical protein H16_A0537 [Ralstonia eutropha H16]
 gi|113525342|emb|CAJ91687.1| Uncharacterized protein conserved in bacteria [Ralstonia eutropha
           H16]
          Length = 530

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 115/417 (27%), Positives = 185/417 (44%), Gaps = 23/417 (5%)

Query: 30  PIHASVLD-EIINESYHSIVNDRFDNF--------LARVDMGIDSDIPIISKETIAQTEK 80
            +H   ++   ++ ++       FD            R+   I    P           +
Sbjct: 105 DLHGGRVNPRAVHANFAPQAERPFDAAIWLRDAVRQQRLPDAIRQAAPTFP--LYGTLRE 162

Query: 81  AIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           A+A Y++I  +  W    P LP   L  G        L  RL+  GDL     +   ++ 
Sbjct: 163 ALARYREIAKQPAWGQPLPPLPASKLTPGQPWAGAAALAARLVALGDLPAGTQVPARYEG 222

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +   VK FQ RHGL+  G++ ++TL  +N+P+  R+RQ+++ + R++       G R +
Sbjct: 223 TLVDGVKAFQSRHGLEADGVIGAATLAQLNLPIASRVRQIELTMERLRWTPLD--GPRMI 280

Query: 197 LVNIPAASLEAVE----NGKVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIPRSII 251
           +VN+P   L A E       + L   VIVG+  D +TP+    +  I F+PYW IP SI 
Sbjct: 281 VVNVPEFMLRAYEIRDGKLDIKLEMKVIVGKALDTRTPLFEEDMRYIEFSPYWNIPPSIA 340

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPPNFIFRQDPGKINAMAS 310
           +++ +  LR+DP Y     +  +   GK V    E +  +        RQ PG +NA+  
Sbjct: 341 RRETVPHLRRDPAYFNRQGLEFVTGDGKAVTTLSEENLEAVLNGRMRIRQRPGPLNALGD 400

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +  N Y+H TP P LF    R  + GC+RV   + L  ++L D P W+   I E
Sbjct: 401 IKFVFPNNENIYLHHTPSPQLFKRGRRDFSHGCIRVEAPVALAQFVLHDMPDWNETRIRE 460

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   K+  V+L   +PV   Y +  +  D  + F  DIYG D +    +      P
Sbjct: 461 AMTRGKSNTVRLQQPLPVVLAYGTVIARADGRVSFLPDIYGHDKLLEKALRQRNGRP 517


>gi|56477065|ref|YP_158654.1| hypothetical protein ebA2890 [Aromatoleum aromaticum EbN1]
 gi|56313108|emb|CAI07753.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 543

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 110/431 (25%), Positives = 189/431 (43%), Gaps = 26/431 (6%)

Query: 18  LILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRFDNFLA--------RVDMGIDSDIP 68
           + L   +      +    +D   ++ ++ +   D FD            R+   +    P
Sbjct: 100 IALTAAMQRYLTDLRFGRVDPRQVHANFVAPAADGFDPVTYLYAAVLERRLPDAVRRVAP 159

Query: 69  IISKETIAQTEKAIAFYQDILSRG----GW----PELPIRPLHLGNSSVSVQRLRERLII 120
           ++     A   +A+  Y+ +         W    P  P R L  G +   +  L +RL+ 
Sbjct: 160 VLP--LYANVREALRRYRILARDPSGIAPWLAALPRPPQRKLEPGQAYAGMPVLMQRLVA 217

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            GDL  +  + + ++  +   VK FQ RHGL   G+V  +TLE ++V    R+RQ+++ L
Sbjct: 218 LGDLPAATPVPLRYEGALVEGVKAFQRRHGLAEDGVVGKATLEQLDVSPVARVRQIELTL 277

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVE--NG--KVGLRSTVIVGRV-DRQTPILHSRI 235
            R++     + G R ++VN+P   L A E  +G  +V     VIVG   D +TP+    +
Sbjct: 278 ERLRWTPLLQ-GPRMIVVNVPEFVLRAYEARDGRVEVKTAMKVIVGSALDTRTPLFDEDM 336

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPP 294
             I F+PYW +P SI + + +  LR+D  YL+      +   G+ +        ++    
Sbjct: 337 RFIEFSPYWNVPPSIARAETIPKLRRDAAYLRQQGFEFVTGNGQVIPTFAPEYLDAVLRG 396

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
               RQ PG  NA+   K  F + +N ++H T  P LF    R  + GC+RV   + L  
Sbjct: 397 EMRIRQRPGPSNALGDIKFIFPNNDNIFLHHTSTPRLFGKDRRDFSHGCIRVEEPVVLAK 456

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           ++L+D P WS   I   +    +  ++L   +PV   Y +     D ++ F  DIYG D 
Sbjct: 457 FVLQDDPEWSEERIRAAMAGGVSKTLRLREPLPVVIAYSTVLVKSDGMVYFFRDIYGHDT 516

Query: 415 VHVGIIPLPED 425
           +    +  P  
Sbjct: 517 LLDAALRQPAR 527


>gi|332092543|gb|EGI97616.1| putative peptidoglycan binding domain protein [Shigella boydii
           5216-82]
          Length = 611

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 119/445 (26%), Positives = 188/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPD 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +   VK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEVVKRFQAWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLVYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADGRTQYRTDIYTYD 593


>gi|30062460|ref|NP_836631.1| hypothetical protein S0986 [Shigella flexneri 2a str. 2457T]
 gi|30040706|gb|AAP16437.1| putative amidase [Shigella flexneri 2a str. 2457T]
 gi|281600285|gb|ADA73269.1| putative amidase [Shigella flexneri 2002017]
 gi|332762697|gb|EGJ92960.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-671]
 gi|333020100|gb|EGK39371.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-304]
          Length = 615

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLVL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   EVDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|218533110|ref|YP_002423926.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218525413|gb|ACK85998.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 586

 Score =  355 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 127 LPSYTAQTFVDTMRAAERYQVYAEAGGWKTLPADFAPKPGDSHAAIPSLRHHLTLTGDLP 186

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R+  
Sbjct: 187 ADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQRLMG 246

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP W 
Sbjct: 247 -SSFCFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNPTWT 305

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD G  
Sbjct: 306 VPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDSGLD 365

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T     
Sbjct: 366 NSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNG 425

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 426 PGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 480


>gi|163854165|ref|YP_001642208.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665770|gb|ABY33137.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 590

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 136/355 (38%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T   T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 131 LPSYTAQTFVDTMRAAERYQVYAEAGGWKPLPADFAPKPGDSHAAIPSLRHHLTLTGDLP 190

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  FD  + +AVK FQ RHGL  +G+    TL A+NVP D+R RQL+ +  R+  
Sbjct: 191 ADAPPSDRFDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPADVRQRQLRASAQRLMG 250

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VNIP+A++EAVENG V  R   +VG  D+QTP + +RI  +  NP W 
Sbjct: 251 -SSFGFGERYVTVNIPSATVEAVENGAVTRRYVAVVGSPDKQTPAVETRITDVNLNPTWT 309

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+I+ +++  +R++P YL  N I ++   G EV    +DWN+ +  N+  RQD G  
Sbjct: 310 VPVSVIKNEIIPTMRKNPGYLAKNRIRILGPGGVEVDPNAIDWNTQKATNYTLRQDSGLD 369

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R+  YMHDTP   LF   VRF + GCVRV  + +   WLL+ T     
Sbjct: 370 NSLGQVRIDMPNRHAIYMHDTPSKSLFAGSVRFHSHGCVRVGQVKEFAAWLLQGTEGPNG 429

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   VKL    PV FVY++ ++  D  + FRDDIYGLD
Sbjct: 430 PGSAWGPIEIETAIAVGERRDVKLVKPTPVAFVYMTGYATSDGRVHFRDDIYGLD 484


>gi|313650833|gb|EFS15234.1| putative peptidoglycan binding domain protein [Shigella flexneri 2a
           str. 2457T]
          Length = 611

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 121/445 (27%), Positives = 190/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 156 YLHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 213

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 214 AAMHESLLVL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 271

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 272 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 331

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 332 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 389

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 390 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 449

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   EVDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 450 VMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 509

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +SGCVRV    DL   LL+D   W+   I + +K   T  V +   +PV
Sbjct: 510 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA-GWNDKRISDALKQGDTRYVNIRQSIPV 568

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 569 NLYYLTAFVGADDRTQYRTDIYNYD 593


>gi|295688991|ref|YP_003592684.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
 gi|295430894|gb|ADG10066.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
          Length = 468

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 108/405 (26%), Positives = 177/405 (43%), Gaps = 28/405 (6%)

Query: 27  VEKPIHASVLD--------EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
             + +H   L          +  + Y    +        R+   + S  P  +       
Sbjct: 82  YARAVHVGRLPVSAFMTEWGLRPDPYDPAPDFAAAVQQDRLAAWLASLPPPYT--GYQTL 139

Query: 79  EKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
              +  Y+ + ++GGW  +P  P L  G     V+ LR RL +  D   +   S  +DA 
Sbjct: 140 MTGLTTYRGLAAKGGWRVVPAGPSLTEGLVDPRVKALRARLAVE-DPTVALTGSDVYDAA 198

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +  AV+  Q R GL+P G+V   TL A+NVPV+ R+ Q++ N+ R + L +     R + 
Sbjct: 199 LVQAVQRAQKRFGLNPDGVVGPGTLNALNVPVERRVDQIEANMERWRWLPQTLPADR-IQ 257

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI AA +   +     L    + GR   +TP+L S I+ I+ NP W +P+SI  K++  
Sbjct: 258 VNIAAAVMSVFQQDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIATKELWP 317

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             + +P YL  N+  +I                        +Q  G   A+   K +F +
Sbjct: 318 KEKANPGYLARNDFIVIPTGD---------------GGSRLQQKAGPKAALGQVKFDFNN 362

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP    F++  R  + GCVR++  I+L   ++   P W+   I+  + +  T
Sbjct: 363 PYGVYLHDTPSRSKFDSFSRLASHGCVRLQKPIELIKLMMAGDPVWTPEKIDATLASGDT 422

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              KL  ++ V  +Y +A+   D  + FRDD YG D   V  I  
Sbjct: 423 VRAKLPQQMAVFLLYWTAYVTPDGQVNFRDDPYGWDKELVQRIAA 467


>gi|170750306|ref|YP_001756566.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656828|gb|ACB25883.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 595

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/355 (36%), Positives = 190/355 (53%), Gaps = 11/355 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLD 125
           P ++  T   T +A   Y      GGW  LP     L  G    ++  LR  L ++GDL 
Sbjct: 159 PTLTSRTFLDTLRAAERYAAFAEAGGWERLPEDLARLKPGERHPAIPALRHHLTLTGDLP 218

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                +   D  + +A+  FQ RHGL  SG++   T+ A+NVP  +R RQL  +  R+  
Sbjct: 219 ADAPPNDRLDPPLVAAIAAFQARHGLPDSGVLGRLTINALNVPAAVRQRQLAASAARLMG 278

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
             +   G RYV+VNIP+A++EAVENG V  R   +VG  D+ TP + +RI  I FNP W 
Sbjct: 279 -SKFPFGERYVVVNIPSAAVEAVENGAVARRYVAVVGSPDKATPPVETRITDINFNPTWT 337

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S+++ +++  +R++P YL  N+I ++   G EV    +DW   +  N+  RQDPG  
Sbjct: 338 VPASVVKNEIIPQMRRNPGYLAKNHIRILSPSG-EVDPTRIDWAGEKAVNYTLRQDPGFD 396

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT--- 362
           N++   +I+  +R   YMHDTP   LF   VRF + GCVRV  + +L  WLL+ T     
Sbjct: 397 NSLGQVRIDMPNRFAVYMHDTPAKSLFAASVRFHSHGCVRVGQVKELVGWLLQGTDGPNG 456

Query: 363 ----WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W    IE  +   +   +KLA  +PV FVY++ ++  D    FRDDIY LD
Sbjct: 457 PGTSWGPIEIETGIADGERRDIKLAKPIPVTFVYLTGYATPDGKAHFRDDIYNLD 511


>gi|253990246|ref|YP_003041602.1| hypothetical protein PAU_02769 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781696|emb|CAQ84859.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 568

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 177/406 (43%), Gaps = 15/406 (3%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETI 75
           YL     +    +          I      +++        + +   + +  P   +   
Sbjct: 155 YLQFVSDVGQQGQNWLYRTTPYKIVLPSPVVIDQWQQAIAGSNIVAYVTALAPQHPQ--Y 212

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-SKGLSVA 133
               K     + +     WP+L     L  G SS  V  LRE LI  G LD  +      
Sbjct: 213 ENMRK--EMMKQLADSKPWPQLSDKGVLRPGQSSSDVTALREVLIRIGMLDELTTKSDNT 270

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + + V+ FQ   GL P G++   T + +N     R   + +N+ R++ +       
Sbjct: 271 YSPELVATVRNFQQWQGLAPDGVIGKRTRDWLNTSPQDRAGLMALNIQRLRIIPGHV--S 328

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL+   N +  L S VIVGR  R+TPI+++ +N ++ NP W +P S+ +K
Sbjct: 329 TGIMVNIPDYSLQYYLNEQEVLNSKVIVGRPSRKTPIMNNVLNNVVINPPWSVPTSLARK 388

Query: 254 DMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNFIFR--QDPGKINAM 308
           D+      DP Y +     +          +    +DWN   P NF +R  Q PG  N++
Sbjct: 389 DIAPRGVNDPGYFQRRGYVIFSSWRADASVIDPYTIDWNVVTPANFPYRIWQAPGPTNSL 448

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    + +  Y+HDTP   LF+  +R  +SGCVRV    +L   LL D   W++  +
Sbjct: 449 GRYKFNMPNSDAIYLHDTPNHGLFDKDIRAISSGCVRVNKASELASMLLGDA-GWNQNRV 507

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +K   T  V +   +PV+  Y++AW  +  + Q+R DIY  DN
Sbjct: 508 SNTLKQGNTAYVNIPQRIPVYLYYLTAWVDELGVAQYRTDIYDYDN 553


>gi|311747883|ref|ZP_07721668.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
 gi|126575877|gb|EAZ80187.1| peptidoglycan binding domain-containing protein [Algoriphagus sp.
           PR1]
          Length = 562

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 197/429 (45%), Gaps = 20/429 (4%)

Query: 18  LILPMGLSLVEKPIHASVLD--------EIINESYHSIVNDRFD--NFLARVDMGIDSDI 67
            ++      + K +    +         ++  +  ++   +  +       ++  + S  
Sbjct: 135 FLMTDAFFRLAKDLELGKIGPESRGTYWKLEAKESNTDPLELLNSVAEGEDIEDALASLY 194

Query: 68  PIISKETIAQTEKAIAFYQDILSRGG--WPELP-IRPLHLGNSSVSVQRLRERLIISGDL 124
           P +  +  ++  + +    +   R    W ++   + L +G+ + SV +LRERL   G L
Sbjct: 195 PKL--DMYSKGREVLKTLYETSERDTLNWKQVSFEQSLKVGDRNQSVPKLRERLQFWGFL 252

Query: 125 DPSKGLSVA-FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           D  +      FD+ +   +K +Q+ +G+ P G +   T   +N   +  I    VN+ R+
Sbjct: 253 DTYETEDELLFDSTMWEGLKKYQIENGMKPDGAIGDLTAGFLNDSPEKLIDIASVNMERM 312

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L E       VLVNI    L+ ++ G   L + VIVG+   ++P+  + ++ I+F+PY
Sbjct: 313 RWLPEINWDEELVLVNIANYQLDYLDKGDTTLSAKVIVGKEYNESPVFSAPMSYIVFSPY 372

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQD 301
           W IP SI Q +++  L+++  YL++ N+ ++   G+ +   +V+W   +   F F  RQ 
Sbjct: 373 WNIPSSITQDEILPSLKKNKAYLQEKNMEVVSNTGEVLDPNKVNWKEKDGEEFPFRIRQK 432

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K  F +  N Y+HDTP   LF    R  + GC+R++        LL+D  
Sbjct: 433 PGGSNSLGLVKFMFPNDYNIYIHDTPARSLFQRESRALSHGCIRIQYPDQFAKSLLRD-K 491

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W+   I E +       VKL  EVPV  +Y++ W+       FR DIY  D   +  + 
Sbjct: 492 KWTTEKISEAMHQENEEVVKLNREVPVLLLYLTFWTDDKGQGHFRPDIYNRDAELLKALR 551

Query: 422 -LPEDHPID 429
             P+   I+
Sbjct: 552 SAPKAESIE 560


>gi|294140649|ref|YP_003556627.1| putative peptidoglycan binding domain-containing protein
           [Shewanella violacea DSS12]
 gi|293327118|dbj|BAJ01849.1| putative peptidoglycan binding domain protein [Shewanella violacea
           DSS12]
          Length = 475

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 12/408 (2%)

Query: 23  GLSLVEKPIHASVLDEIINESYH-----SIVNDRFDNFLA-RVDMGIDSDIPIISKETIA 76
            LSL    +  + +++I ++         I  +  +   +  +   + S  PI   +   
Sbjct: 67  ALSLGPTKVKQARVEQIQSQLQEFWGTLGIPTNAVNMKSSQDLFQQVLSLEPI--SKDYL 124

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            T   I +   +  R  W EL     L LG+S   V  +  RL + GDL     ++  FD
Sbjct: 125 TTSNKIRYLLWLEQRDDWSELASNTWLKLGDSHSLVPEISSRLKVLGDLRQYDPINTLFD 184

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A V + VK FQ+RHGL   G++   TL  +N+    R   L +N +     L   +  R+
Sbjct: 185 ANVNNGVKRFQLRHGLTLDGIIGPETLSWINMKPVKRAELLAINFINKTGYLA-SVEPRF 243

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++NIPA  LE ++NG+V L+S VIVG+  RQTP L SRI+ ++ NP W +PRS++ +D+
Sbjct: 244 LIINIPAFELELIDNGQVALQSRVIVGKPYRQTPQLSSRISNLVINPSWRVPRSLLTRDL 303

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKI 313
           +  +R+D  Y++  N  + D  G+ V     +W      +F +R  Q PG+ N +   K 
Sbjct: 304 LPKVREDGGYIQARNFDVFDNNGEIVSKTSQEWQDLAHGHFPYRLVQIPGEGNTLGRYKF 363

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F + ++ Y+HDT +  LF    R  +SGC+R+ N+  L  W+  +     +  ++   +
Sbjct: 364 YFENEHSVYLHDTVDKELFEESNRALSSGCIRIENVEGLANWMASNLVRDKQTWVDMQPE 423

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
             KT    L   +P++ VY +AW  +    QFR+DIY  +      + 
Sbjct: 424 RHKTQWFSLEQSLPIYLVYWTAWVDQWGNAQFRNDIYHKNPTFKLALA 471


>gi|269967085|ref|ZP_06181153.1| putative amidase [Vibrio alginolyticus 40B]
 gi|269828344|gb|EEZ82610.1| putative amidase [Vibrio alginolyticus 40B]
          Length = 477

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 99/397 (24%), Positives = 173/397 (43%), Gaps = 35/397 (8%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            LS++   I    L + +      +  +D F +  + +        P   +  +A     
Sbjct: 107 TLSVLSNEITVGKLGQFLASLRSPLQTDDAFYSAYSSLSEHSQYQYPAYQQTGLA----- 161

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVES 140
                                 +G+   +   L ER+ I G D+     ++  +D  +E 
Sbjct: 162 ---------------------RVGDILENRPLLIERMEIVGVDVSYLDLVTEEYDEQLEL 200

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A+K FQ  HGL   G++  +T+  +N     R+  L +N  R +   +++     V VN+
Sbjct: 201 AIKEFQRIHGLKEDGVIGPNTIRWINFSPQERLHLLALNSERSRIWSKER--DNVVFVNV 258

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           P   +    +G+    S V+VGR  R+TPI+   ++ ++ NP W +P +I+ KD++  ++
Sbjct: 259 PGYEVTYWHDGQPLFESKVVVGRASRKTPIMSVALDSVILNPTWNVPWTIMVKDIIPKVK 318

Query: 261 QDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFY 316
           ++P YL ++NI +I      + +    ++W +  P    +  RQ  G  NA+   K    
Sbjct: 319 RNPMYLINHNIQIIRSWTSNEIIDPTTINWATVNPRTFPYRMRQASGLQNALGLYKFNMP 378

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +    Y+HDTP   LF    R  +SGCVRV +   L   L K      R   +     R 
Sbjct: 379 NPQAIYLHDTPSKNLFEQDRRAFSSGCVRVEHADQLAELLFKTQGLEERLAKKRESSRRS 438

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            T V L   + VH +Y +AW  ++  + +RDDIY  D
Sbjct: 439 NTSVPLGERIQVHIIYQTAWL-EEGTLYYRDDIYKYD 474


>gi|319955785|ref|YP_004167048.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319418189|gb|ADV45299.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 110/421 (26%), Positives = 191/421 (45%), Gaps = 13/421 (3%)

Query: 6   KINKILYCFFVYLILPM-GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID 64
           ++      + +Y  +           +      ++  E Y   +        A +   + 
Sbjct: 126 RLYLNYMHYLLYGGIDWKAFDAKRAELTKKYKIKVGWEYYRPKMTPASLLVEATMSGDLR 185

Query: 65  SDIPIISKET--IAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIIS 121
           S       +    A+ +KA+  Y +I  RGGW  LP  + +  G S  ++  +R+ L I 
Sbjct: 186 SAFAKAEPKRFKYAKLKKALERYLEIADRGGWKPLPAFKAIKPGQSHPAIPLIRQHLRIE 245

Query: 122 GDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           GDL  S    S  +D  ++ A++ +++RHGL  + ++D+ T   +N  V  +I  L++NL
Sbjct: 246 GDLPASASLDSDIYDETLQKAMRRYKLRHGLPGTPVIDAQTRRWLNTSVQYKIAMLRLNL 305

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            RIK +  Q+  +R + +NIPA  L   E   +     V+ G+ D  TP+ H+ +  I+ 
Sbjct: 306 DRIKWIWRQEAPVR-IELNIPAFRLYVYEGQHLVDTMRVVTGKPDHPTPVFHNTMKYIVV 364

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPP--- 294
           NPYW IP SI++ +M+  L +DP Y +     +     +    +    ++W+        
Sbjct: 365 NPYWKIPESIVRSEMLKHLVKDPYYYERRGKVLHAGWDEDSPRIDPGTINWSQYVGNNKT 424

Query: 295 -NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             + F Q PG  NA+   K  F ++ + Y+HDTP   LF    R  + GC+R++   +L 
Sbjct: 425 IPYRFMQVPGTRNALGKIKFLFPNKYSVYIHDTPSKKLFFRSTRAFSHGCMRIQKPRELL 484

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             L           I E + TR+   + L  E+PV  VY++A+      + FR DIY  D
Sbjct: 485 KVLALYNSNIDVEGIMEQLGTREKETISLLHEIPVDIVYLTAFVDDYGNLNFRKDIYHYD 544

Query: 414 N 414
            
Sbjct: 545 K 545


>gi|300722551|ref|YP_003711841.1| putative carboxypeptidase [Xenorhabdus nematophila ATCC 19061]
 gi|297629058|emb|CBJ89643.1| putative carboxypeptidasewith PGDB-like domain [Xenorhabdus
           nematophila ATCC 19061]
          Length = 572

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 116/374 (31%), Positives = 174/374 (46%), Gaps = 17/374 (4%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGN 106
                +N  + V   I S  P           K     + +  +  W E L    L LG 
Sbjct: 188 WQQHINN--SNVLSYIMSLSPNHP--MYENMRK--EMLEQLSDKQPWTEFLLKSTLRLGQ 241

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           S+ ++  L + L+ SG LDPS   S    ++  + +AVK FQ  HGL   G++  ST   
Sbjct: 242 SNENMAALEKILVRSGVLDPSVTNSDNKVYNKALVAAVKRFQTLHGLAADGVIGQSTKTW 301

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N    +R R + +N+ R++ +         + VNIP  SL+   NGK  L S V+VGR 
Sbjct: 302 LNTAPQIRARIMALNIQRLRIIPGDIP--TGIFVNIPNYSLDYYLNGKEVLNSKVVVGRP 359

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEV 281
            R+TPI+ S +N ++ NP W +P S+ +KD+     +DP Y +     +        K +
Sbjct: 360 SRKTPIMSSELNNVVINPPWNVPTSMTRKDIAPRAMRDPGYFRTRGYTVFSSWSNDAKVI 419

Query: 282 FVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
               ++W    P NF    RQ PG  N++   K    + +  Y+HDTP    FN  +R  
Sbjct: 420 DSSSINWGVVTPGNFPYRIRQAPGPTNSLGRFKFNMPNSDAIYLHDTPNQTAFNREMRAI 479

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGCVRV    +L   LL D   W +  +   +KT  T  V +  ++PV   Y +AW  K
Sbjct: 480 SSGCVRVNKAPELADMLLGDA-GWDKSKVNNSLKTWATKYVSIPKKIPVFLYYQTAWVDK 538

Query: 400 DSIIQFRDDIYGLD 413
             I Q+R DIY  D
Sbjct: 539 KGIPQYRADIYDYD 552


>gi|213027433|ref|ZP_03341880.1| hypothetical protein Salmonelentericaenterica_35663 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 410

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 115/408 (28%), Positives = 178/408 (43%), Gaps = 53/408 (12%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS 110
           +     ++ M + S  P   +   A    A+     +     WP+L     L  G  S  
Sbjct: 3   YALEEGQLPMFVASLAPQHPQ--YAPMHDALLKL--VADSRPWPQLTNTATLRPGQWSND 58

Query: 111 VQRLRERLIISGDLDP-----------------------------------------SKG 129
           V  LRE L  +G LD                                             
Sbjct: 59  VPALREILQRTGMLDGGPKIALPGDNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAP 118

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            + A+D  +  AVK FQ   GL   G++  +T   +N+    R   L +N+ R++ L  +
Sbjct: 119 AARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAE 178

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 179 L--STGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPT 236

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKI 305
           + +KD++  +  DP YL+ +   ++     +  +   +VDW +  P N  FR  Q PG  
Sbjct: 237 LARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAH 296

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K    S +  Y+HDTP   LF    R  +SGCVRV    +L   LL+D   W+ 
Sbjct: 297 NSLGRYKFNMPSSDAIYLHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWND 355

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             I   +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 356 ARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 403


>gi|94967237|ref|YP_589285.1| peptidoglycan binding domain-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549287|gb|ABF39211.1| Peptidoglycan-binding domain 1 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 625

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 13/393 (3%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL--SRGGWPELPIRPLH 103
                +       V+  + +  P  +      T+  +  Y ++     G    +P + L 
Sbjct: 236 PQFLTQRLVNGQNVEAELAAVQPQFA--GYKATQAWLQRYIELARQDNGEQLPVPTKALD 293

Query: 104 LGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            G     + RL   L + GDL           + A +  AVK +Q RHGL   G + + T
Sbjct: 294 PGKPYAGIPRLTSLLHLLGDLPADAVVPAGDVYQAPLVDAVKRYQSRHGLTADGRLGAQT 353

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVI 220
           ++ +N P+  R+ QL++ L R + L ++      V+VNIP   L A + N KV L   V+
Sbjct: 354 VKELNTPLSTRVEQLRLTLERWRWLPQE-FPQPPVVVNIPEFRLRAYDANHKVVLSMNVV 412

Query: 221 VGRVDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           VG+  R  TP+    +  ++F PYW +P SI + +++  +++D  Y+   N  +  + G+
Sbjct: 413 VGKALRHETPVFDDEMKYVVFRPYWNVPPSIQRSEIVPAIQRDRDYISKKNYEVTTQAGQ 472

Query: 280 EVFVEEVD---WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            V    +               RQ PG  NA+   K+ F ++ N Y+H TP   LF+   
Sbjct: 473 VVTSGTISDEVLQQLRAGKLAVRQKPGPTNALGLVKLIFPNQYNVYLHSTPSQQLFSQAR 532

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISA 395
           R  + GC+RV    +L  W L+D P W+   +   ++       V L+  VPV  +Y +A
Sbjct: 533 RDFSHGCIRVEKPAELSAWALQDKPEWTVERVRAAMQKGPDNVQVNLSKPVPVLILYGTA 592

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
            + +D  + F DD+YG D      +     +P+
Sbjct: 593 VAEEDGSVHFFDDLYGYDADLEKALARGYPYPL 625


>gi|222109387|ref|YP_002551651.1| erfk/ybis/ycfs/ynhg family protein [Acidovorax ebreus TPSY]
 gi|221728831|gb|ACM31651.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax ebreus TPSY]
          Length = 533

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 117/423 (27%), Positives = 175/423 (41%), Gaps = 20/423 (4%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIA 83
           L    I  + L+E  + S     + R     A  D  I                    +A
Sbjct: 100 LHGGRIDPARLNERYDHSRRPQPDLRAALQTALADGQIQQARDAAIPRVPMYPALRALLA 159

Query: 84  FYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-------KGLSV 132
            Y+ + +   W    P LP R L  G     +  L ERL+  GDL P             
Sbjct: 160 HYRALGAHPAWAQPLPALPGRKLTPGQPWEGLGVLAERLVALGDLPPQPTGEPPAASAPA 219

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +   +  A   FQ RHGL+  G++ ++TL A+NVP   R  Q+ + + R++     + G
Sbjct: 220 QYTPVLVEAATAFQRRHGLEADGVLGATTLAALNVPPAARAEQIALQMERLRWTPVLQ-G 278

Query: 193 LRYVLVNIPAASLEAVENG----KVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVIP 247
            R + VN+P   L A E       + L   VIVG+  D +TP+    +  I F+PYW IP
Sbjct: 279 PRMIAVNVPEYRLRAYEYAGGRITLRLSMAVIVGKALDTRTPLFDEDMQSIEFSPYWNIP 338

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI + + +  LR+DP YL    +  +   G           +        RQ PG +NA
Sbjct: 339 PSIARGETVPRLRRDPGYLARQGMEFVSAAGVSTDTTPEMLGAVVAGQARIRQRPGPLNA 398

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    + +N Y+H T  P LF    R  + GCVRV   + L  ++L+D PTW+   
Sbjct: 399 LGDIKFVLPNNDNIYLHHTSAPTLFGRSRRDLSHGCVRVGEPVALAQFVLQDDPTWTVER 458

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           I   +   K   V+L   VPV   +I+     D    F  D+YG D     ++      P
Sbjct: 459 IRAAMAQPKPVFVRLPHPVPVIITHITVVVQ-DGRPHFYGDLYGHDRKLASLLRQHSAKP 517

Query: 428 IDS 430
            D+
Sbjct: 518 YDA 520


>gi|217970214|ref|YP_002355448.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
 gi|217507541|gb|ACK54552.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
          Length = 549

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 107/387 (27%), Positives = 175/387 (45%), Gaps = 6/387 (1%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
             Y              +   +D+  P +           +   Q  L+ G WP++   P
Sbjct: 164 RPYERAAELARVLQAPDLAAAVDAYAPDLP--LYRALRAELLAQQGRLAVGDWPKVAAGP 221

Query: 102 -LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G SS  V  LR RL  +G+          +D  +  AVK FQ  HGL   G++ + 
Sbjct: 222 TLKPGASSSRVASLRARLAAAGERVSEARDKSHYDEALVEAVKRFQAAHGLQADGVLGAQ 281

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TLEA+N     R+ Q++ NL R++ +     G R +LV+I     + V +G+    S VI
Sbjct: 282 TLEALNASPAQRVAQIRANLERLRWVASDLQGDR-LLVDIVGYHADLVLDGQPVWSSRVI 340

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+  R+TP L   +  ++ NP WV+P +I+++D++    ++P YL +  + ++D  G+ 
Sbjct: 341 VGKPKRRTPSLLDSVTHLVLNPKWVVPPTILREDVIPGAARNPSYLANRRLRVVDRSGQT 400

Query: 281 VFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           V    +DW+        +   Q  G   ++   K    +    Y+HDT    LF    R 
Sbjct: 401 VDPATIDWSGARQSGFPYRVEQQSGADGSLGRIKFSLSNPYVIYLHDTNARSLFKRAERA 460

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    +L V LL D+  WS   ++  + + +T  V +  +V V   Y +A   
Sbjct: 461 LSSGCVRVEKPEELAVLLLADSGRWSAQALQAALDSGRTRTVDVGRDVKVLLHYATAALD 520

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPLPED 425
           +   +  R+DIYG D   V  +  P  
Sbjct: 521 EAGRVLLRNDIYGYDAAIVAALDAPAP 547


>gi|152995955|ref|YP_001340790.1| peptidoglycan-binding domain-containing protein [Marinomonas sp.
           MWYL1]
 gi|150836879|gb|ABR70855.1| Peptidoglycan-binding domain 1 protein [Marinomonas sp. MWYL1]
          Length = 556

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 197/426 (46%), Gaps = 17/426 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESY---HSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           +I  + L+     +     +  + +      +  N+  D         + + +P+++  +
Sbjct: 134 VISTIALTSYAHDLSNGRYEPQLIDPNWQLDAPNNNWKDLLYLNSATDMVNSLPLLAPRS 193

Query: 75  --IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL--DPSKG 129
                 +K + +YQD+ ++     +    PL  G+    V +LR RL+  GD+     K 
Sbjct: 194 PQYQVLQKWLVYYQDLAAKEKDIFVSAGVPLSAGDEGPRVAQLRARLVQLGDIRFSTRKV 253

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               FD  ++ A+  FQ RH +   G   S T++ +NVP+  R +Q+  NL R + L  +
Sbjct: 254 NEEQFDIRLKEALIRFQQRHHITADGAAGSKTIQMLNVPLKTRAKQIAYNLERWRWLPSE 313

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +    + V++   +++   NG++      ++G+ DR+TP+    +  ++ NP W +P  
Sbjct: 314 -LEANRIWVDLTNYTVDMYLNGELT-SMKAVIGKPDRKTPVFKGLMTYMVTNPTWRVPHR 371

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGK 304
           I +++++  L+ DP YL  +   +        KE+   +++W +       FR  Q P +
Sbjct: 372 IARENLLPKLQADPNYLVKHGYKVYSSWSIGAKELDSTKINWKAINEDKLAFRFEQKPDE 431

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F ++N  Y+HDTP   LF    R  +SGCVR+ N  +    + K +  ++
Sbjct: 432 GNALGQFKFMFPNKNEIYLHDTPAKHLFREEDRAFSSGCVRLENPTEFAKEITKGSKQFN 491

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
              +   +KT   T + L T +PV+ VY +     + +++FR+DIY  D +    +    
Sbjct: 492 --DMNNSLKTGSNTVITLPTYIPVYLVYFTVVPNANGMLEFRNDIYERDALMEEAMGYSA 549

Query: 425 DHPIDS 430
             P DS
Sbjct: 550 FGPRDS 555


>gi|120434782|ref|YP_860468.1| peptidoglycan binding domain-containing protein [Gramella forsetii
           KT0803]
 gi|117576932|emb|CAL65401.1| protein containing peptidoglycan binding-like domain [Gramella
           forsetii KT0803]
          Length = 543

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 112/402 (27%), Positives = 196/402 (48%), Gaps = 10/402 (2%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLA--RVDMGIDSDIPIISKETI 75
            L +   L    +  + + EI     ++       +  ++   +   +DS  P       
Sbjct: 136 YLRLAKDLATGKLDPTKIHEIWGTPLNTIDAEKVLEKAISEGNIHKSLDSLKPDH--LVY 193

Query: 76  AQTEKAIAFYQ-DILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDP-SKGLSV 132
            Q + A+  ++ + +  G   ++    L   G++S  +  + +RL   G  +  S   + 
Sbjct: 194 HQLKSALNKFKKNGIEEGPTTKISTGKLIRPGDNSDRMPSIAKRLSELGYFNGISDSTNT 253

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            ++  ++ AVK FQ+ H L    ++ S+T+  +N+    R  Q+ VNL R +   +  +G
Sbjct: 254 IYNEDIQKAVKEFQLDHDLQEDALLGSTTISNLNLTRRDRYHQILVNLERWRWYPK-NLG 312

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             Y++VNIP   L  ++         ++VG   R+TPI    I  I++NP W IP +I +
Sbjct: 313 KHYIIVNIPDYELSVIKEEDTIRTHKIMVGTEVRKTPIFSDEIGYIIYNPTWTIPPTIKK 372

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
            D++   ++D  Y +  NI + D +G +V    VDWNS +   + +RQ  G  N +   K
Sbjct: 373 NDVIPGAKKDIGYFQKKNIKIYDSEGTDVDPASVDWNSSKARGYTYRQPAGPTNPLGIVK 432

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
           I + +    Y+HDTP   LF    R ++SGCVRV++ + L  +LL D  ++    IEE++
Sbjct: 433 IIYPNEYLIYLHDTPSRSLFEKNARAQSSGCVRVQDALGLAKYLLSDQDSYDDEKIEEIL 492

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           K+ KTT + +  +V VH  Y + +  KD  I+F DDIY LD 
Sbjct: 493 KSGKTTQITVKQKVKVHHFYWTVYQKKD-AIKFIDDIYNLDQ 533


>gi|330013904|ref|ZP_08307828.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
 gi|328533309|gb|EGF60058.1| peptidoglycan binding domain protein [Klebsiella sp. MS 92-3]
          Length = 389

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 109/378 (28%), Positives = 172/378 (45%), Gaps = 31/378 (8%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERL 118
              I    P   +       +++     +     WP++     L  G  S  +  LRE L
Sbjct: 1   PAFIAGLAPRHPQ--YEAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGALREIL 56

Query: 119 IISGDLDPSK-------------------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +G L+ S                         +D  +   VK FQ   GL   G++  
Sbjct: 57  QRTGMLENSANIVLPGDVVSPSAKKKSKPAARGVYDRQLVEGVKRFQAMQGLGADGVIGQ 116

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           ST + +NV    R   L +N+ R++ L  +      ++VNIPA SL   ++G   L S V
Sbjct: 117 STRDWLNVSSAQRAGVLALNIQRLRLLPGKL--STGIMVNIPAFSLVYYQDGSQVLASRV 174

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           IVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R +P YL+ +   ++     
Sbjct: 175 IVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNS 234

Query: 280 --EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
              +    VDW++    N  FR  Q PG  N++   K    S +  Y+HDTP   LF   
Sbjct: 235 KETIDPYRVDWSTITENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKD 294

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           VR  +SGCVRV    +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A
Sbjct: 295 VRALSSGCVRVNKASELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTA 353

Query: 396 WSPKDSIIQFRDDIYGLD 413
           +   D   Q+R DIY  D
Sbjct: 354 FVDADGRTQYRTDIYNYD 371


>gi|171056700|ref|YP_001789049.1| peptidoglycan-binding domain-containing protein [Leptothrix
           cholodnii SP-6]
 gi|170774145|gb|ACB32284.1| Peptidoglycan-binding domain 1 protein [Leptothrix cholodnii SP-6]
          Length = 516

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 105/379 (27%), Positives = 167/379 (44%), Gaps = 14/379 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQR 113
           R+   +    P +      Q  +A+A Y+ +     W    P L  R L    +   +  
Sbjct: 142 RLPQAVREAAPRLP--LYEQLRQALAQYRALGEHPAWAQKLPPLRGRKLEPLQAWDGLPL 199

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L  RL + GDL     + V  +  + +AV+ FQ RHGL   G+V  +TL A+ V    R 
Sbjct: 200 LAGRLQVLGDLPADVPVPVRHEGALVAAVQAFQRRHGLGDDGVVGRATLAALAVTPAQRA 259

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK----VGLRSTVIVGRV-DRQT 228
           RQ+ + L R++    Q +G R ++VN+P   L A E       V L   VIVG+  D  T
Sbjct: 260 RQIALTLERLRWTPLQ-LGPRMIVVNVPEFVLRAYETRDDRIDVRLEMKVIVGKALDTPT 318

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVD 287
           P+    +  I F+PYW +PRSI   +++  L+ +P Y        +   G+      +  
Sbjct: 319 PLFTEEMRFIEFSPYWNVPRSIAGAELVPRLQSEPAYFTRQGFEFVGRDGRVSAGFGDEQ 378

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
            ++        RQ PG  NA+   K  F + +  Y+H TP P LF    R  + GC+RV+
Sbjct: 379 LDAVLRGELRIRQRPGPNNALGDIKFVFPNNDAIYLHHTPSPGLFERDRRDFSHGCIRVQ 438

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
             + L  ++L+D P W    I E +   ++  ++L   VPV   Y +    +     F  
Sbjct: 439 EPVALAKFVLQDQPGWDEARIVEAMARGQSRTLRLDRPVPVLIAYGTVLV-RQGRPHFLA 497

Query: 408 DIYGLDNVHVGIIPLPEDH 426
           D+YG D +    +      
Sbjct: 498 DVYGNDQLLDEALRKRRRR 516


>gi|326797793|ref|YP_004315612.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548557|gb|ADZ76942.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 548

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 21/358 (5%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISG 122
           S  P+  +    Q    +  Y+++ ++  W  +    +   +G+SS  +++++ RL + G
Sbjct: 205 SIEPVYRQ--YEQLRGYLKKYRELAAKHKWNPIIADKKSYKIGDSSTVLRQIKTRLFLLG 262

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           D      L+  +D+ + S V+ FQ RHGL P G + S T+  +NV    R++Q+ VN+ R
Sbjct: 263 DYQGD-TLTNLYDSTLFSGVRSFQSRHGLRPDGAIGSGTINELNVLPAARLKQIAVNMER 321

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + L    +   Y+ VNIP   L       +     V+VG+   +T I H  +  ++F+P
Sbjct: 322 SRWLPV-SLKTDYLAVNIPEFKLHVYHADSLLWSCNVVVGKAMHKTVIFHGDVKYVVFSP 380

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
           YW +P SI++ +++  +R+D  Y+  +N+ +  + G                    RQ P
Sbjct: 381 YWNVPPSIVKNEILPGMRRDRNYIAKHNMEITGKSG---------------GLPNVRQKP 425

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K  F +  N Y+HD+P   L+N   R  + GC+RV     L  +LL+   T
Sbjct: 426 GPKNSLGLVKFLFPNSYNIYLHDSPAKSLYNESSRAFSHGCIRVSEPEKLANFLLRSDST 485

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           W++  I + +   K   V L   VPV   Y +A+  ++  I FR DIY  D+    ++
Sbjct: 486 WNKESIYKAMHAGKEKYVTLKKTVPVFIAYFTAFIDREGKINFRKDIYDRDDRLAKML 543


>gi|317047572|ref|YP_004115220.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949189|gb|ADU68664.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 602

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 113/427 (26%), Positives = 174/427 (40%), Gaps = 68/427 (15%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLG 105
              +  +   +R    + S  P   +   A    A+     +     WP+L     L  G
Sbjct: 168 QWQNAVNGGGSR--AFVLSLEPQHPQ--YAPMHAALKTL--LNDNRPWPQLRDSGTLKPG 221

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSV--------------------------------- 132
             S  V  LRE L  +G L                                         
Sbjct: 222 QISNDVPALREILQRTGMLSGHSATPTPADDAVPVAPVPVSQSAQPVAVSPSAASVNDLS 281

Query: 133 --------------------AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
                                +D  +   VK FQ   GL   G +   T E +NV   +R
Sbjct: 282 AQAPQAPGNVAANPVQSANNVYDNALVEGVKRFQHWQGLADDGAIGPRTREWLNVSPQMR 341

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              L +N+ R++ L +       ++VNIP  SL    NG   L S VIVGR DR+TP++ 
Sbjct: 342 AALLALNIQRLRLLPDDMHNG--IMVNIPNYSLTYYNNGATILSSRVIVGRPDRKTPLMR 399

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWN 289
           S +N ++ NP W +P S++++D++  ++QDP YL  +   ++       + +    +DWN
Sbjct: 400 SALNNVVLNPPWNVPTSLVRQDIVPKVKQDPGYLYKHGYTLLSGWSADAQVIDPSSLDWN 459

Query: 290 SPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                   +  RQ PG +N++   K    S +  Y+HDTP   LF   +R  +SGCVRV 
Sbjct: 460 MVSAASFPYRIRQAPGAMNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVN 519

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L   LL+D   W+   I + +K   T  V +   +PV+  Y++AW   D   Q+R 
Sbjct: 520 KASELADLLLQDA-GWNDSRISDTLKEGNTRYVPIRHRIPVNLYYLTAWVADDGQPQYRT 578

Query: 408 DIYGLDN 414
           DIY  DN
Sbjct: 579 DIYNYDN 585


>gi|254472994|ref|ZP_05086392.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
 gi|211957715|gb|EEA92917.1| peptidoglycan-binding domain 1 [Pseudovibrio sp. JE062]
          Length = 550

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 109/413 (26%), Positives = 181/413 (43%), Gaps = 17/413 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDE-IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIA 76
           IL          +    + E I          +     +AR                   
Sbjct: 146 ILKYAEDAQAGRVSPYAISEDITLRPERPDPIEAL-TSVARSAAPAQVLAAFNPPHAEYK 204

Query: 77  QTEKAIAFYQDILSRGGWPE---LPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             +K +A  ++    G   +   +P   L  +G+ S  V  LRERL +       +    
Sbjct: 205 ALKKQLAELREQTHNGDLEKQVVIPAGKLLKVGSKSSRVALLRERLSV----PTVESQMN 260

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD-LRIRQLQVNLMRIKKLLEQKM 191
            +   +  AV+ FQ  +GL P G V   TL A+N  V    I+ +  N+ R + +  + +
Sbjct: 261 VYTQDLAYAVEAFQAANGLHPDGAVGPRTLLALNGRVSGDPIKDVIANMERWRWMP-RDL 319

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G  ++ VNIP   +     G V   + V+VG+   +TP+   ++  ++ NPYW +P SI 
Sbjct: 320 GETHLRVNIPEFMVRLNMEGFVLYETRVVVGKRSNKTPVFSDKMQHVVVNPYWNVPYSIA 379

Query: 252 QKDMMALLRQD--PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
            K+++  LR      YL+  N  ++   GK V    V+W++        RQ PG+ NA+ 
Sbjct: 380 SKELLPELRASNPQSYLQKGNYEIVYG-GKIVDPRRVNWDAVTFKQIRIRQRPGRGNALG 438

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +++N Y+HDTP   LFN   R  + GCVRV+N  +    L+    T +  +I 
Sbjct: 439 KIKFMFPNKHNVYLHDTPSKSLFNRSERAFSHGCVRVQNPFEFSDALMATQDTITGNYIR 498

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +V  ++T  V L  ++PVH  Y +A+  +   +Q R DIYG +   +  + L
Sbjct: 499 SLVGKKQTQ-VNLQKDIPVHISYFTAFVDEAGKLQRRPDIYGHNQAVIDALNL 550


>gi|261344276|ref|ZP_05971920.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
 gi|282567879|gb|EFB73414.1| putative peptidoglycan binding domain protein [Providencia
           rustigianii DSM 4541]
          Length = 575

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 115/422 (27%), Positives = 182/422 (43%), Gaps = 30/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           YL     +    +    +     I     S +    D     R+   + +  P  +    
Sbjct: 143 YLQYLAAIDTNGQYWLYTSRPYKIIAPTTSQMKPWLDAISEHRLAEWVKAQAPKHT--MY 200

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-------- 127
               K +     +           + L  G +S  V  LRE L+  G LD S        
Sbjct: 201 QPMRKEMLKQLTLPEDTLEIT-STKALKPGQASDDVITLREILVRDGLLDASVIGEAIDA 259

Query: 128 ----------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                        +  ++  +  AVK FQ+++GL+  G++   T   +N+    +   + 
Sbjct: 260 SAPPEEIAKVTANARVYNDELVEAVKKFQLQYGLEADGVIGRGTRVWLNMQPKQKAGLMA 319

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ + E       +LVNIPA +L+   N ++ L S VIVGR DR+TPI+ S +N 
Sbjct: 320 LNIQRLRIVPESS--GTGILVNIPAYTLDFYLNNEIILDSKVIVGRADRKTPIMSSALNN 377

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP- 293
           ++ NP W +P S+ +KD+    + DP Y       +    G+   EV    +DW +  P 
Sbjct: 378 VVINPPWSVPTSLARKDIAPKGKVDPSYFSRKGYTVYSGWGQDAYEVDPYSIDWENMSPA 437

Query: 294 -PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ PG  N++   K    S +  Y+HDTP   LFN   R  +SGCVRV    +L
Sbjct: 438 NFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNKNARAISSGCVRVNKASEL 497

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL D   W++  I+  +K   T  V +   +PV+  Y +AW  KD   Q+R DIY  
Sbjct: 498 ATILLGDA-GWAQTRIDGALKDGSTRYVNIPDRIPVYLYYQTAWVDKDQQPQYRADIYQY 556

Query: 413 DN 414
           D 
Sbjct: 557 DG 558


>gi|110804934|ref|YP_688454.1| hypothetical protein SFV_0927 [Shigella flexneri 5 str. 8401]
 gi|110614482|gb|ABF03149.1| putative amidase [Shigella flexneri 5 str. 8401]
          Length = 615

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 120/445 (26%), Positives = 188/445 (42%), Gaps = 55/445 (12%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPIKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   EVDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWEVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF    R  +S CVRV    DL   LL+D   W+   I +  K   T  V +   +PV
Sbjct: 514 HNLFKRDTRALSSDCVRVNKASDLANMLLQDA-GWNDKRISDARKQGDTRYVNIRQSIPV 572

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLD 413
           +  Y++A+   D   Q+R DIY  D
Sbjct: 573 NLYYLTAFVGADDRTQYRTDIYNYD 597


>gi|330830685|ref|YP_004393637.1| cell wall degradation protein [Aeromonas veronii B565]
 gi|328805821|gb|AEB51020.1| Cell wall degradation protein [Aeromonas veronii B565]
          Length = 494

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 123/376 (32%), Positives = 176/376 (46%), Gaps = 10/376 (2%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
           +    +V    D+    +   + S  P ++          +     +     WP L +  
Sbjct: 120 DLNRPVVTQPSDD---DLLTQVKSLRPQVA--EYEAVRAKVHKLLAMPMASKWPTLDMPT 174

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G SS  + ++R  L   GD          +D   E A+K FQ RHGL   G++   T
Sbjct: 175 LRAGESSAELGQIRAMLNELGD-SAPSHGDQIYDGDTEQAIKQFQRRHGLTADGIIGRQT 233

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
              +N    +R   L  NL R + L++Q  G RYVLVNIP   L  VE+G     S VIV
Sbjct: 234 RSWLNTGPQVRASLLLRNLWR-RDLVDQLAGGRYVLVNIPDYRLSVVESGNEVFTSRVIV 292

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  R TPIL S I  I+ NP W +PRSI+ KD++  L +DP YL      +ID +G  V
Sbjct: 293 GKEQRATPILASEIRSIVLNPSWHVPRSILSKDILPKLGRDPAYLSREQFEVIDSEGNPV 352

Query: 282 FVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              E  W+        +  RQ PG  NA+   K    + +  Y+H TP   LF    R  
Sbjct: 353 QFTEEGWHQALAAGFPYRLRQKPGDHNALGRYKFYLPNNDAIYLHSTPRKALFEQGARAF 412

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+RV +  DL   LL D+  +    +  ++K  +T  + L T +PV  VY S+W  +
Sbjct: 413 SSGCIRVEHADDLAELLLADS-RYQPDKVANILKESQTKWLPLTTPIPVFTVYWSSWIDE 471

Query: 400 DSIIQFRDDIYGLDNV 415
           +   Q R+DIYG D V
Sbjct: 472 NGRQQLRNDIYGFDRV 487


>gi|291326407|ref|ZP_06124362.2| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
 gi|291314414|gb|EFE54867.1| putative peptidoglycan binding domain protein [Providencia rettgeri
           DSM 1131]
          Length = 583

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 118/438 (26%), Positives = 182/438 (41%), Gaps = 46/438 (10%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLAR-VDMGIDSDIPIISKETI 75
           YL     +    +    +     I     + +    D   +  +   + S  P       
Sbjct: 135 YLQYLSSVEASGQYWLYTNRPYKIIAPTTAQMKPWLDAVESNNLSSWVKSQAPNHP--MY 192

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---------- 125
               K +     +        +  + L LG SS  V  LR+ L   G L+          
Sbjct: 193 LPMRKEMLKLLAMPEDNL-EIVGTKALKLGQSSDDVVMLRQILQREGLLEGGNVTEEVAP 251

Query: 126 ------------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                                   P+  +S  +D  +  AVK FQ+++GL+  G+V   T
Sbjct: 252 PETMAQVAELAVEQTVEPTEPSDAPASTVSKVYDQELVDAVKKFQLQYGLEADGVVGKGT 311

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
              +N+    +   + +N+ R++ +         +LVNIP  SL+   N +V L S VIV
Sbjct: 312 RVWLNMQPKQKAGLMALNIQRLRIIPASS--GTGILVNIPGYSLDFYLNDEVILDSKVIV 369

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--- 278
           GR DR+TPI+ S +N ++ NP W +P S+ +KD+    +QDP Y       +    G   
Sbjct: 370 GRADRKTPIMSSALNNVVINPPWSVPTSMARKDIAPKGKQDPSYFSRKGYTVYSGWGADS 429

Query: 279 KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            E+    +DW++  P    +  RQ PG  N++   K    S +  Y+HDTP   LFN   
Sbjct: 430 YEINPYAIDWDNITPANFPYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHSLFNRNA 489

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV    +L   LL D   W +  I+  +K   T  V +   +PV   Y +AW
Sbjct: 490 RAISSGCVRVNKASELASILLGDA-GWEQKRIDGALKEGSTRYVNIPDRIPVFLYYQTAW 548

Query: 397 SPKDSIIQFRDDIYGLDN 414
             KD   Q+R DIY  DN
Sbjct: 549 VDKDQQPQYRADIYQYDN 566


>gi|212709809|ref|ZP_03317937.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
 gi|212687620|gb|EEB47148.1| hypothetical protein PROVALCAL_00857 [Providencia alcalifaciens DSM
           30120]
          Length = 575

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 178/422 (42%), Gaps = 30/422 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           YL     +    +    +     I       +    D     R+   + +  P  +    
Sbjct: 143 YLQYLSSVESSGQYWLYTSRPYKIIAPTTPQIKPWLDAASEHRLGEWVKAQAPKHA--MY 200

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-- 133
               K +     +           + L  G +S  V  LRE L+  G L+ S        
Sbjct: 201 QPMRKEMLKQLALPEDTLEIT-STKTLKPGQASDDVITLREILVRDGLLEASAVSETVDA 259

Query: 134 ----------------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                           +   +  AVK FQ+++GL+  G++   T   +N+    +   + 
Sbjct: 260 SAPPEEINKVTANARVYSDDLVEAVKKFQLQYGLEADGVIGKGTRVWLNMQPKQKAGLMA 319

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +N+ R++ + E       +LVNIPA +L+   N  + L S VIVGR DR+TPI+ S +N 
Sbjct: 320 LNIQRLRIVPESS--GTGILVNIPAYTLDFYLNNDIILDSKVIVGRADRKTPIMSSALNN 377

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP- 293
           ++ NP W +P S+ +KD+    + DP Y       +    G+   E+    +DW +  P 
Sbjct: 378 VVINPPWSVPTSLARKDIAPKGKMDPSYFSRKGYTVYSGWGQDAYEIDPYTIDWENITPA 437

Query: 294 -PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ PG  N++   K    S +  Y+HDTP   LFN   R  +SGCVRV    +L
Sbjct: 438 NFPYHIRQAPGSSNSLGRYKFNMPSSDAIYLHDTPNHSLFNKNARAISSGCVRVNKASEL 497

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL D   W++  I+  +K   T  V +   +PV+  Y +AW  KD   Q+R DIY  
Sbjct: 498 ATILLGDA-GWAQTRIDGALKEGSTRYVNIPDRIPVYLYYQTAWVDKDQQPQYRADIYQY 556

Query: 413 DN 414
           D 
Sbjct: 557 DG 558


>gi|117619072|ref|YP_855763.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560479|gb|ABK37427.1| cell wall degradation protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 433

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 122/363 (33%), Positives = 170/363 (46%), Gaps = 7/363 (1%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
               +   +    P ++        + +     +     WP L +  L  G  S  + ++
Sbjct: 69  AGDNLLEQVRQLRPQVA--EYDAVREEVRKLLALPMAKKWPTLTMPTLRAGEVSPELGQI 126

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R  L   GD  P       +DA    AVK FQ RHGL   G++   T   +N   ++R  
Sbjct: 127 RSILNELGDTAPR-HDDATYDAETLQAVKQFQRRHGLTADGIIGRQTRSWLNTGPEVRAS 185

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
            L  NL R + L++Q  G RYVLVNIP   L  VE+G     S VIVG+  R TPIL S 
Sbjct: 186 LLLRNLWR-RDLVDQLSGARYVLVNIPDYRLSVVESGNEVFTSRVIVGKEQRATPILASE 244

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS--PE 292
           I  I+ NP W +PRSI+ KD++  L +DP YL      +ID +G  V   E  W      
Sbjct: 245 IRSIVLNPAWHVPRSILSKDILPKLGRDPAYLNREQFEVIDGEGNPVQFTEEGWQQALAS 304

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ PG  NA+   K    +    Y+H TP   LF    R  +SGC+RV +  DL
Sbjct: 305 GFPYRLRQKPGDHNALGRYKFYLPNNEAIYLHSTPRKALFEQGARAFSSGCIRVEHADDL 364

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LL D+  +    +  ++K  +T  + L T +PV  VY S+W  +D   Q R+DIYG 
Sbjct: 365 AELLLADS-RYQPDKVASILKETQTKWLPLTTPIPVFTVYWSSWIDEDGRQQLRNDIYGF 423

Query: 413 DNV 415
           D V
Sbjct: 424 DRV 426


>gi|298293068|ref|YP_003695007.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296929579|gb|ADH90388.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 678

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 16/411 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--I 75
            +L     +         + + + +   ++ +      L        +     + +    
Sbjct: 262 TVLTYARHVQSGRFDPKTISKDV-DPSPTVPDPAAVLALVSGSPNPRAAFDSFAPQYDEY 320

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
              +  +A            ++P  P L  G+S   V  LR RL I G           +
Sbjct: 321 KLLKVELAKLMAEGRGVTQVQVPAGPMLRPGDSDPRVPLLRARLGIGG-----APEDTEY 375

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+++  AV+ FQ   GL P G+V   TL A+N     ++  +  N+ R + +   ++   
Sbjct: 376 DSFLADAVRDFQKLSGLKPDGVVGRGTLAALNGAGGDQMPDIIANMERWRWVP-HQVAPV 434

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YV+VNIP   +  V N +    + V+VG+ D QTP++   +   +FNP W +P SII+ +
Sbjct: 435 YVMVNIPEFMVRVVVNEQTVHETRVVVGKPDTQTPLMSENMQYAVFNPSWNVPPSIIRNE 494

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           M+  L  DP  L+   I ++   G+ V    +DW+      + FRQ+PG+ NA+   K  
Sbjct: 495 MLPKLMADPYALERQGIDVV-RNGRIVDPGAIDWSR-GATGYSFRQEPGERNALGRMKFM 552

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEV 371
           F +++  Y+HDTP   LF    R  + GCVRV   +     L         WS+  I ++
Sbjct: 553 FPNKHAVYLHDTPSRSLFARERRAFSHGCVRVHEPLAFAEALFALGLPNEGWSQPRIAKL 612

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           V       V L    PVH VY + +   +  +  R+D+YG++     I+ L
Sbjct: 613 V-GGNEKSVTLKRRFPVHLVYFNTFVDGNGRLVSREDLYGINGATKAILGL 662


>gi|126174124|ref|YP_001050273.1| peptidoglycan binding domain-containing protein [Shewanella baltica
           OS155]
 gi|125997329|gb|ABN61404.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS155]
          Length = 521

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 110/404 (27%), Positives = 183/404 (45%), Gaps = 6/404 (1%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-IAQTEKAI 82
           L+L    + A+ +   +                      +D+   +I  +    +  K +
Sbjct: 115 LTLSPNTLSAADMAR-VQADVTGYWRYIKTFAQCNNGAPVDTVSAVIPTDLHYQRVLKQV 173

Query: 83  AFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A    + +   W  L     L +G S   V  + +RL + GDL      ++ +   +   
Sbjct: 174 AHLVQLDATEPWETLVLDEKLTVGMSHPFVDTIAKRLWLLGDLAIEPTTNLVYSEELVVG 233

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ RHGL   G++   TL  +N     R   L  N +R +   E+K+   Y+L+N+P
Sbjct: 234 VKRFQQRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ERKLEPSYLLINVP 292

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R+
Sbjct: 293 AFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRR 352

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +  YL +    + D  G+ V     +W   +     +   Q PG  NA+   K  F +  
Sbjct: 353 NGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSF 412

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+H T EP LFN   R  +SGC+R+  + +L  W  +      R   + V    +   
Sbjct: 413 SVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLVPDVTEPQW 472

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             L+ ++PVH VY +AW       Q+R DIY L+      +P  
Sbjct: 473 FSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVPAT 516


>gi|300022478|ref|YP_003755089.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524299|gb|ADJ22768.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 423

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 137/359 (38%), Positives = 208/359 (57%), Gaps = 14/359 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP--------LHLGNSSVSVQRLRERLII 120
            +SK  IA T+ AI  Y +I+++GGWP+LP  P        L  G +  +V  LR+RL  
Sbjct: 60  TLSKANIAATKTAIQRYTNIVAQGGWPQLPEPPNKTPRDSLLQYGTTDAAVALLRQRLAT 119

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
           SGDL      S  FD+ V+ A+K FQ  +GL P+G+ D  T+ A+NVP D R++QL+ N+
Sbjct: 120 SGDLTGGNISSTYFDSDVDKALKRFQASNGLTPTGIADKRTIVALNVPADARLKQLKANV 179

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R+++   +  G +YV+VNIPAA +EAV+NG++  R   +VG+ DR TP+LH+ I  + F
Sbjct: 180 SRLEEFTAK-AGKKYVVVNIPAAQVEAVQNGQIVARYAAVVGKADRPTPLLHTPITDLSF 238

Query: 241 NPYWVIPRSIIQKDMMALLR----QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           NP W +P ++I +D++   R    +    L   +I      GK+V   +++W++ +P  +
Sbjct: 239 NPVWRLPPTVISEDLIPRGREMQSKGQNVLLKFHIDAY-SNGKKVDPAKINWSTVKPGTY 297

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
            + Q PGK N +   KI F S ++ YMHDTP   +F    R  +SGC+RV NI +L  WL
Sbjct: 298 TYSQQPGKENPLGFLKINFDSAHSVYMHDTPSDRIFGRNYRSASSGCIRVHNIENLAAWL 357

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L +   W    I  +    +   ++L   V + FVYISAW+  D I+QFR D+Y  D +
Sbjct: 358 LAEQRGWDSERIASMKANGERLDLRLKKPVQLLFVYISAWATPDGIVQFRRDLYQKDGI 416


>gi|256422945|ref|YP_003123598.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256037853|gb|ACU61397.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 534

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 95/351 (27%), Positives = 168/351 (47%), Gaps = 20/351 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           ++ A   K++  Y DI  +  W  +     +    G+S+  +  +++RL  +G+    K 
Sbjct: 196 QSYAALHKSLQRYVDIAEKNSWDTIRIEKKKRYKKGDSTAVIAWVKKRLQATGEYS-DKD 254

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            S  F+  +E+AV  F+  HG  P G++  + L  MN+P    ++++ +NL R+      
Sbjct: 255 TSTVFNDALETAVTAFEATHGHTPKGVITDTLLREMNMPAIKLVQRILINLERMHWAPAN 314

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             G R +LVNIP   L      K      V+VG+  + T +   ++++I+F+PYW +P S
Sbjct: 315 PEG-RLILVNIPEFGLHVWNGSKKEFDMPVVVGKEGKSTTMFSGKLDQIVFSPYWNLPNS 373

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++++++  L ++  Y+   N+ +                       I RQ PGK N + 
Sbjct: 374 IVKEEILPALARNKNYISSKNMEI---------------TGERNGLPIVRQKPGKDNPLG 418

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y HDT +  LF+   R  + GC+R+ + + +  +LL D   WS   I+
Sbjct: 419 QVKFLFPNSFNIYFHDTNQKYLFDRDQRAFSHGCIRLGDPVKMANYLLADNQNWSAERID 478

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             + + K   V++   VPV   Y +AW  +   +QFR+DIY  D    G +
Sbjct: 479 SAMNSGKEKYVRVKDPVPVLITYYTAWVDEAGKLQFREDIYDHDTYMAGKL 529


>gi|16125758|ref|NP_420322.1| peptidoglycan binding domain-containing protein [Caulobacter
           crescentus CB15]
 gi|221234516|ref|YP_002516952.1| cell wall degradation protein [Caulobacter crescentus NA1000]
 gi|13422888|gb|AAK23490.1| peptidoglycan binding domain protein [Caulobacter crescentus CB15]
 gi|220963688|gb|ACL95044.1| cell wall degradation protein [Caulobacter crescentus NA1000]
          Length = 502

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 114/411 (27%), Positives = 186/411 (45%), Gaps = 23/411 (5%)

Query: 16  VYLILPMGLSLVEKPIHASVLDE---IINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
           V L L    ++    +  S       +   +Y             R+   +++  P  + 
Sbjct: 110 VSLTLAYARAVRTGRLPISAFKAEWGLRPAAYDPTPEFVAAVQQGRLAEWLETLPPPYT- 168

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                    +A Y+DI ++GGW  +   P L  G +   V  L  RL    D   +   +
Sbjct: 169 -GYQALRTGLATYRDIAAKGGWLPIAAGPELKEGVTGARVVALEARLAAE-DPTVAVDAA 226

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FDA +  AV+  Q R GL+P+G+VD +TL A+N+PV+ RI Q+  N+ R + L +   
Sbjct: 227 PVFDAALTQAVQRAQKRFGLNPNGIVDRATLAALNIPVERRIDQIVANMERWRWLPQTLP 286

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             R + VN+ AA L    +    L    + GR   +TP+L S I+ I+ NP W +P+SI 
Sbjct: 287 AER-IQVNVAAAILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIA 345

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
            K++    R  P YL  N+  +I                 E      +Q  G + A+   
Sbjct: 346 SKEIWPKERASPGYLARNDFIVIP---------------IEGGGTRLQQKAGPLAALGKV 390

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K +F +    Y+HDTP    F++  R  + GCVR++  I+L   +++D PTW+   + E 
Sbjct: 391 KFDFNNPYGVYLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPTWTPEKVNET 450

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + +T   KL  ++ V+ +Y +A+   D  + FR D YG D   V  I  
Sbjct: 451 LASGETVRAKLPQQIAVYLLYWTAYVTPDGQVNFRQDPYGWDRDLVQRIAA 501


>gi|149278087|ref|ZP_01884226.1| cell wall degradation protein [Pedobacter sp. BAL39]
 gi|149231285|gb|EDM36665.1| cell wall degradation protein [Pedobacter sp. BAL39]
          Length = 532

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 102/405 (25%), Positives = 190/405 (46%), Gaps = 23/405 (5%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
                 +  E  +   VL +              D+ ++      +   P+         
Sbjct: 144 FFNYVSTAYEGKVDPEVL-QWHIPRKKLNTAALLDSLMSGKKTAAEDWEPV--NREYKWM 200

Query: 79  EKAIAFYQDILSRGGWPELPIRPL---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +K +  Y  +   G + ++    L    +G+S+++V+++R RLI  GD    K  S  FD
Sbjct: 201 KKRLTSYYQLQQEGKFEDISSGKLKVYRIGDSALTVRQVRLRLIQFGD-STLKDSSSVFD 259

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           + + ++VK  Q ++G+  +G ++ + ++A+NVP++ RI+Q+ +N+ R++ + +   G RY
Sbjct: 260 STLRASVKRAQGQYGMGQNGNINKALIKALNVPLEQRIKQILINMERMRWMPQMPDG-RY 318

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +L NIP   L   E+ K  L   ++VG+   +T I  +++  I+F+PYW IP SI++ ++
Sbjct: 319 LLANIPEYRLHVFEDHKTVLNMGIVVGKAANKTVIFSNKMRNIVFSPYWNIPASIVRAEV 378

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +  ++++  YL   N+                           RQ PG  N++   K  F
Sbjct: 379 LPAMKRNRNYLASKNMEQ---------------TGFSNGLPEVRQKPGDNNSLGRVKFLF 423

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y HDTP   LF    R  + GC+R+     L  +LL     W++  I + +  +
Sbjct: 424 PNSYDIYFHDTPAKSLFAQEKRAFSHGCIRLSQPAALAEYLLDGKSGWTKEKIAKAMSGK 483

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           K   V L++ VPV   Y + W  +D ++ FRDD+YG D      +
Sbjct: 484 KEVWVALSSPVPVFITYFTCWVDEDGLLNFRDDVYGHDRKMAEQL 528


>gi|87120480|ref|ZP_01076374.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
 gi|86164123|gb|EAQ65394.1| hypothetical protein MED121_22022 [Marinomonas sp. MED121]
          Length = 561

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 99/419 (23%), Positives = 185/419 (44%), Gaps = 23/419 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESY------HSIVNDRFDNFLARVDMGIDSDIPIIS 71
           +I  + LS     +     + ++ +         S  ++            + + +P ++
Sbjct: 139 VISTIALSSYAHDLSIGRYEPLLIDPNWQLDAPSSQWSELL---YLNTASDMVNYLPQLA 195

Query: 72  KE--TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL--DP 126
                    +K + +YQDI ++     +    PL LG+    + +LR RL+  GD+    
Sbjct: 196 PRHPDYQILQKWLVYYQDISAKQKDIRVTAGVPLSLGDQGPRIAQLRARLVQLGDIRFST 255

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  FD  ++ A+  FQ RH L   G   S T+E +N+P+ LR +Q+  NL R + L
Sbjct: 256 RTIQEDKFDKKLKQALINFQRRHDLTADGHAGSQTIEMLNIPISLRAKQIAYNLERWRWL 315

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +    R + V++    +  + N +      V++G+ +R+TP+    +  ++ NP W +
Sbjct: 316 PTELEAER-IWVDLTDYKVHTILNDQHS-TMKVVIGKKERKTPVFKGEMTYMVTNPTWRV 373

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QD 301
           P  I Q+ ++     +P YL +    +        KE+    +DW    P N  +R  Q 
Sbjct: 374 PHRIAQESLLPKAHANPNYLIEQGYKVYSSWTIGAKELDPSLIDWRKVTPENLKYRFEQT 433

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           P + NA+   K  F +RN  Y+HDTP   LF    R  +SGC+R+         L+  + 
Sbjct: 434 PDEGNALGLYKFMFPNRNEIYLHDTPAKHLFKESNRAFSSGCIRLEKPQLFANNLVAGSK 493

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
                 ++  +++++T  V L  ++PV+ VY +    ++ +  FR DIY  D +    +
Sbjct: 494 Q--VEALQNAIQSKETKVVSLPKQLPVYIVYFTVVPDRNGMPGFRKDIYERDILMEEAM 550


>gi|212635582|ref|YP_002312107.1| hypothetical protein swp_2794 [Shewanella piezotolerans WP3]
 gi|212557066|gb|ACJ29520.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 464

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 181/352 (51%), Gaps = 4/352 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +   Q +  I+  + +     W  +     +  G S  S+  + +RL++ GD   S   +
Sbjct: 106 DNYLQLQNRISHLRWLAEHQQWTPIYIEGLIRPGMSHKSLLAIADRLMLLGDGVASAQSA 165

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            + D  + + V+ FQ RHGL+P G++   TL+ +NV    R R L  + ++  + + Q+ 
Sbjct: 166 ESLDDRLVNGVRRFQRRHGLNPDGIIGPETLKWINVDPMERARILAKSFVQKAEFMSQR- 224

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             +++++NIPA  +E +  GKV L S VIVG+  RQTP+L S I+ ++ NP W +P+ I+
Sbjct: 225 AEQFLVINIPAYEMELISQGKVELESRVIVGKPYRQTPLLSSAISNVVINPSWRVPKKIL 284

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
             D++  +R D  Y++     + D +G +V      W       F FR  Q PG  N + 
Sbjct: 285 FNDLLPQVRIDGNYIEQREFDVFDREGNQVVRSAQQWRDLAAGPFPFRFVQRPGVNNTLG 344

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  + Y+HDT +P LFN   R  +SGC+R+ N+  L  W+  +     +  ++
Sbjct: 345 RYKFYFPNDYSVYLHDTSDPKLFNKSYRALSSGCIRIENVEGLANWMAANLVKDKQTWVD 404

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
             +   KT    L + + VH VY +AW  KD++ QFR+DIY   +++    P
Sbjct: 405 RHIDRNKTQWFALNSTLNVHLVYWTAWIDKDNLAQFRNDIYQKQSINDASDP 456


>gi|197106129|ref|YP_002131506.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
 gi|196479549|gb|ACG79077.1| peptidoglycan binding domain protein [Phenylobacterium zucineum
           HLK1]
          Length = 510

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 114/414 (27%), Positives = 176/414 (42%), Gaps = 28/414 (6%)

Query: 18  LILPMGLSLVEKPIHASVLD--------EIINESYHSIVNDRFDNFLARVDMGIDSDIPI 69
             L  GL+     +    L          +  + Y             R+   +D   P 
Sbjct: 106 TALIEGLARYAHDLKVGRLALGDFPANWAVRPQPYDPAPELARALAEDRLKAWLDGLAPR 165

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSK 128
            +        + +A Y++I + GGW  +P    + +G++   V  LR RL    D   + 
Sbjct: 166 YA--GYVALTRGLARYREIAAAGGWKTIPAGSSMAIGSTDPRVPALRARLAAE-DPQLTD 222

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             S  FD  ++ AV   Q R GL P G+V + TL  +N PV  RI Q+  NL R + L  
Sbjct: 223 LTSPTFDPALQEAVVRAQKRFGLKPDGVVGNGTLAFLNQPVGQRILQIIANLERWRWLPA 282

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                R V VN  AA +    + K  L    + G+   +TP+L S I+ ++ NP W +P 
Sbjct: 283 TMPATR-VQVNSGAAIVTLFRDDKPVLSMKAVSGKPGDETPMLVSAIHSVVINPPWNVPT 341

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I  +++    R+DP Y   N+  ++  +G                    +Q PG   A+
Sbjct: 342 RIANEELWPKQRRDPGYFARNDYVVLPTEG---------------GGSRVQQKPGPKAAL 386

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K +F +    Y+HDTP    F+   R  + GCVR+     L   LL   P W R  I
Sbjct: 387 GRFKFDFDNPFTVYLHDTPSKGTFDLYARQASHGCVRLEKAQLLAEALLASDPKWGREGI 446

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           E  + T KT  V L+ +VPV+ +Y +A++  D  + FR D Y  D + +  I L
Sbjct: 447 EAQLATGKTLRVSLSEQVPVYILYWTAFAGADGQMHFRADPYNWDRLLLTKIGL 500


>gi|160875046|ref|YP_001554362.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160860568|gb|ABX49102.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
 gi|315267278|gb|ADT94131.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
          Length = 521

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 107/404 (26%), Positives = 180/404 (44%), Gaps = 6/404 (1%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS-KETIAQTEKAI 82
           L+L    + A+ +   +                      +D+   +I       +  K +
Sbjct: 115 LTLSPNTLSAADVAR-VQADVAGYWRYIKTFAQCNNGAPVDTVSTVIPTDAQYQRVLKQV 173

Query: 83  AFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
                + +   W  L     L +G S   +  + +RL + GDL      ++ +   +   
Sbjct: 174 THLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIEPMTNLVYSEELVVG 233

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ RHGL   G++   TL  +N     R   L  N +R +   E+K+   Y+L+N+P
Sbjct: 234 VKRFQHRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ERKLEPSYLLINVP 292

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R+
Sbjct: 293 AFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRR 352

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +  YL +    + D  G+ V     +W   +     +   Q PG  NA+   K  F +  
Sbjct: 353 NGHYLNERQFDVYDYNGQLVQHMPEEWQGLASTSFPYQLVQRPGAKNALGKYKFHFDNSF 412

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+H T EP LFN   R  +SGC+R+  + +L  W  +      R   +      +   
Sbjct: 413 SVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLAPDVTEPQW 472

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             L+ ++PVH VY +AW       Q+R DIY L+      +P  
Sbjct: 473 FSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVPAT 516


>gi|167624266|ref|YP_001674560.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354288|gb|ABZ76901.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 464

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 107/403 (26%), Positives = 184/403 (45%), Gaps = 8/403 (1%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLAR----VDMGIDSDIPIISKETIAQ 77
               L +  +  S L  I +E     ++ +     +      D  I +           Q
Sbjct: 51  YRSLLSQHSLSPSELKPIEHEIAQFWLSRQIPIRNSSTNHLGDPFIRAMALEPELNGYLQ 110

Query: 78  TEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
            +  I     +  +G W P +    +       S+  + +RL + GD + S   S   D 
Sbjct: 111 IQNRIRHLHWLAQQGWWQPIIIDELIRPSKKHPSIPTIAKRLWLLGDAERSATTSTLLDE 170

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            + SA+K FQ RHGL P  ++   T++ +NV    R R L  N +   + + Q+ G +++
Sbjct: 171 KLSSALKRFQRRHGLQPDAIIGPETMKWLNVQPIERARMLANNFVLKAEFMAQR-GDQFL 229

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           ++NIPA  +     G+V L S VIVG+  R TP+L   I+ ++ NP W +P+ I+  D++
Sbjct: 230 VINIPAFEMALFSKGRVELESRVIVGKPYRPTPLLSGAISNVVINPSWRVPKKILYNDLL 289

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIE 314
             +R+D  Y+ + N  + D     V      W+  +  P  + F Q PG  N +   K  
Sbjct: 290 PHVRKDGNYIAEGNFDVFDRSNNLVVRTAQQWSDLARGPFPYRFVQRPGYNNTLGRYKFY 349

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           F +  + ++HDT  P LF    R  +SGC+RV N+  L  W+  +     +  ++   + 
Sbjct: 350 FPNDFSIFLHDTSNPKLFERSNRALSSGCIRVENVEGLANWMAANLVKDKQTWVDRHAER 409

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
            +T    L + + VH VY +AW  + +  QFR+DIY L  ++ 
Sbjct: 410 TRTQWFALNSTLNVHLVYWTAWIDEHNQAQFRNDIYQLQTLNT 452


>gi|257095730|ref|YP_003169371.1| peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048254|gb|ACV37442.1| Peptidoglycan-binding domain 1 protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 542

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 111/425 (26%), Positives = 182/425 (42%), Gaps = 22/425 (5%)

Query: 16  VYLILPMGLSLVEKPIHASVLD-EIINESYHSI-----VNDRFDNFLAR--VDMGIDSDI 67
           ++ +L   L      +    +D + +   Y  I      +    + +A   +        
Sbjct: 101 LHAMLHTALRRYVSDLRYGRVDPQQLGARYSPIGSAPAPDALLHSAMADDQMPDLARRAA 160

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGD 123
           P        +  +A+A Y+ +     W    P LP   L  G +   V RL  RLI+  D
Sbjct: 161 PR--SADYERLRQALAAYRAVAGHPAWQQELPPLPSGKLAPGQAYSGVSRLTARLIVLAD 218

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           L         ++  +   +K FQ RHGL P G++   T E + V    R+ QL++ L R+
Sbjct: 219 LPVGTLPPPRYEGSLVDGIKSFQERHGLTPDGVIGKETFEQLKVSPGARVGQLELALERL 278

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGL----RSTVIVGRV-DRQTPILHSRINRI 238
           +    Q+ G R ++VN+P   L   +    G        VIVG     +TP+  + +  +
Sbjct: 279 RWTPLQRQG-RIIVVNVPEFMLHTYQMNDKGSDPGPVMRVIVGNARKTRTPLFDAEMRFV 337

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD-WNSPEPPNFI 297
            F+PYW +P SI + + +  LR DP Y +     ++   G+ +        ++       
Sbjct: 338 EFSPYWNVPPSISRGETLPRLRSDPGYFERQGFELVTSDGRVLGSLPEGGLDALAQGRMR 397

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ PG  NA+   K  F + +N Y+H TP   LF    R  + GC+RV    DL  ++L
Sbjct: 398 IRQKPGARNALGDIKFVFPNTDNIYLHHTPTAQLFKRDRRDFSHGCIRVEAPADLAEFVL 457

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
              P W+R  I + +K  K+  ++L  E+PV   Y +A   +D  + F  DIYGLD    
Sbjct: 458 AGEPEWTRQRIIQAMKRGKSATLRLKEEIPVVIAYRTATV-RDGRVHFFPDIYGLDRALR 516

Query: 418 GIIPL 422
             +  
Sbjct: 517 DALQQ 521


>gi|127512756|ref|YP_001093953.1| peptidoglycan binding domain-containing protein [Shewanella loihica
           PV-4]
 gi|126638051|gb|ABO23694.1| Peptidoglycan-binding domain 1 protein [Shewanella loihica PV-4]
          Length = 458

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 105/374 (28%), Positives = 174/374 (46%), Gaps = 6/374 (1%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPL 102
              I    F +        + +  P ++          + +   +     W P  P   L
Sbjct: 78  RQGIATGEFPSAPDDPYTSVIASEPQVAD--YLMLSNRVRYLLWLARHESWLPLEPQGWL 135

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+S   +  +R RL   GD        + FD  +++A+  FQ RHGL P  ++  +TL
Sbjct: 136 KPGDSHRIIPEIRVRLQALGDYPQGDTSGLYFDETLKAAMIKFQTRHGLKPDAIIGPATL 195

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +N     R + L VN +R +      +G RY+L+NIPA  +  V++ +V LRS VIVG
Sbjct: 196 SWLNRTPRERAQLLAVNFIR-RAEYLADIGERYLLINIPAYEMWLVDDNQVALRSKVIVG 254

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  RQTPI+   I  ++ NP W +PR ++  D++  +R+D  Y+   N  + D +G+ V 
Sbjct: 255 KPYRQTPIISGEIKNLVLNPSWRVPRRLLTHDLLPKVREDGSYISSRNFEVFDYQGERVI 314

Query: 283 VEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
             + +W       F +R  Q PG  N +   K  F +  + Y+HDT +  LF    R  +
Sbjct: 315 KSDDEWRDIAKGKFPYRLVQKPGVGNTLGRYKFFFPNEYSVYLHDTSDKALFQRSDRALS 374

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGC+R+  +  L  W+        +  +   ++  KT        +P+H VY ++W   D
Sbjct: 375 SGCIRIEKVEQLANWMASHLVRDKQTWVRMQIERDKTQWFAFDAGLPIHLVYWTSWLDDD 434

Query: 401 SIIQFRDDIYGLDN 414
           ++ QFRDDIY  + 
Sbjct: 435 NVAQFRDDIYKKNQ 448


>gi|304320160|ref|YP_003853803.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
 gi|303299063|gb|ADM08662.1| hypothetical protein PB2503_02927 [Parvularcula bermudensis
           HTCC2503]
          Length = 572

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 113/400 (28%), Positives = 190/400 (47%), Gaps = 18/400 (4%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
            +        V  +++            D    +++  I   IP   +    + ++ +  
Sbjct: 163 QMASSATDRPVHSQLVKSVR--------DAGQGKIERSISPFIPSNPQ--YERLQETLKT 212

Query: 85  YQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAV 142
           Y+ I   GGW  L + P+   G+    +  LR RL   G LD      S   D  + SA+
Sbjct: 213 YRQIEEDGGWEALDVGPIVKPGDRHAVISPLRTRLAKEGFLDRQHDNGSPLLDRPLRSAL 272

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
              Q +HG+D  G+    T  A+N PV+ +I +L  +L R ++L    +G +YV  NIP+
Sbjct: 273 IAAQAQHGIDEDGVFGPETARALNEPVESKIARLADSLYRWREL--GDLGDKYVWANIPS 330

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
              E  +N +  +    I+G+ DR TP    +++ I+ NP W +P SI+Q+D +  L++D
Sbjct: 331 FRAEGWKNRRKEISMRAIMGQPDRPTPTFSDKVDYIVANPKWYVPSSIMQRDKLPKLQRD 390

Query: 263 PQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEP-PNFIFRQDPGKINAMASTKIEFYSRNN 320
           P Y       +ID+  G+ V   EVDW + +    +   Q  GK NA+   KI F ++ +
Sbjct: 391 PGYAARGEYTVIDKTTGEAVSPYEVDWFADDVTARYRLVQGAGKGNALGRIKIIFPNQYS 450

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDTP   LF++  R  +SGCVR+ +  ++  W+ +         IE  ++ ++T  V
Sbjct: 451 VYLHDTPTKSLFDHATRAFSSGCVRLEHPQEMAEWIARTNGQEKVDQIEMALRDKETERV 510

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIY--GLDNVHVG 418
           +L+ E+PVH  Y++    +     F  DIY  G D   V 
Sbjct: 511 ELSAELPVHITYMTVTVDEAGTPTFWRDIYNKGQDEQLVA 550


>gi|145298228|ref|YP_001141069.1| hypothetical protein ASA_1213 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851000|gb|ABO89321.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 494

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 117/345 (33%), Positives = 165/345 (47%), Gaps = 5/345 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
                  + +     +     WP L +  L  G +S  + ++R  L   GD  P      
Sbjct: 146 AEYESVREEVRKLLAMPMAKQWPTLTMPTLRAGEASPELGQIRTILNELGDGAPR-HDDA 204

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D   + A+K FQ RHGL   G++   T   +N    +R   L  NL R + L++   G
Sbjct: 205 TYDVDTQQAIKQFQRRHGLTADGIIGRQTRTWLNTGPQVRASLLLRNLWR-RDLVDHLSG 263

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            RYVLVNIP   L  VE+G     S VIVG+  R TPIL S I  I+ NP W +PRSI+ 
Sbjct: 264 ARYVLVNIPDYRLSVVESGNEVFTSRVIVGKEQRATPILASEIRSIVLNPPWHVPRSILS 323

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMAS 310
           KD++  L +DP YL      +ID +G  V   E  W         +  RQ PG  NA+  
Sbjct: 324 KDILPKLGRDPAYLNREQFEVIDGEGNPVQFTEEGWYQALAAGFPYRLRQKPGDHNALGR 383

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K    + +  Y+H TP   LF    R  +SGC+RV +  DL   LL D+  +    +  
Sbjct: 384 YKFYLPNNDAIYLHSTPRKALFEQGARAFSSGCIRVEHADDLAELLLADS-RYQPDKVAS 442

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++K  +T  + L T +PV  VY S+W  ++   Q R+DIYG D V
Sbjct: 443 ILKNTQTKWLPLTTPIPVFTVYWSSWIDEEGRQQLRNDIYGFDRV 487


>gi|254490473|ref|ZP_05103659.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxidans DMS010]
 gi|224464217|gb|EEF80480.1| Putative peptidoglycan binding domain protein [Methylophaga
           thiooxydans DMS010]
          Length = 501

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 111/424 (26%), Positives = 193/424 (45%), Gaps = 24/424 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESY--------HSIVNDRFDNFLARVDMGIDSD 66
           +   +L   +  +   +    LD    +          +     +       +   ++  
Sbjct: 84  YFDTLLTDAMLDLIHDLAIGRLDPAQADPTWFIPRDKVNPAEELQKALLNPYIKNVLNKL 143

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLD 125
           +P + +    Q    ++ Y+    RGGW  +P  PL   G+S   V  LR RLI      
Sbjct: 144 LPPLPQ--YHQLTHFLSQYRGYQLRGGWQTVPTMPLLRPGDSHQHVPSLRARLITENPSL 201

Query: 126 P--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
                  +  +D  +   VK FQ RHGL   G+V S T  A+N  VD  I +++VNL R 
Sbjct: 202 NLIEVEQTTIYDRQLVETVKQFQARHGLKIDGIVGSETRAALNQSVDDLITKIRVNLERF 261

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L    +G RY+LVN+ +  L AVE+G++ L   VIVG+  R TP  +S +  ++ NPY
Sbjct: 262 RWLP-DDLGKRYLLVNLGSHQLSAVEDGQIKLNMKVIVGKSQRATPSFNSAMTHLVINPY 320

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP----PNF 296
           W +P  + ++D++   + +P Y   N  ++     +    V    ++W+          +
Sbjct: 321 WNVPHKLARRDLLPKQQANPDYFFLNEFNLFLRNAEVHTPVDPYRINWDEVSALSSEFPY 380

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             +Q PG++NA+   K  F +  N Y+HDTP+  LF+   R  +SGC+RV + + L  + 
Sbjct: 381 RLQQRPGELNALGRLKFMFPNPWNIYLHDTPDKALFSENQRNFSSGCIRVEDPLALGQFS 440

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L +     +  ++  + + +    KL T +PV+ VY + W      ++F  D YG D+  
Sbjct: 441 LNENNA--QSWLQSQIDSGQNRGRKLETPLPVYAVYFTIWPD-QGEVRFSPDPYGRDSTI 497

Query: 417 VGII 420
              +
Sbjct: 498 AKRL 501


>gi|167645745|ref|YP_001683408.1| peptidoglycan-binding domain-containing protein [Caulobacter sp.
           K31]
 gi|167348175|gb|ABZ70910.1| Peptidoglycan-binding domain 1 protein [Caulobacter sp. K31]
          Length = 500

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 113/388 (29%), Positives = 165/388 (42%), Gaps = 21/388 (5%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR- 100
             Y    +        R+   +DS  P  +        K +  Y+DI +RGGW  L    
Sbjct: 131 APYDPGPDFVQAVAEDRLGPWLDSLPPPYT--GYQTLRKGLTTYRDIAARGGWKPLAGGA 188

Query: 101 PLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           PL LG +    +  L+ RL    D       +  FD  ++ A+   Q R GL+P G +  
Sbjct: 189 PLKLGATGDPRIAALKVRLAAE-DATVVVDKAQVFDEVLQQALMRAQKRFGLNPDGGLGP 247

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +TL A+NVPV+ RI Q+  N+ R + L  +    R + VNI AA +    +    L    
Sbjct: 248 ATLAALNVPVERRIDQILANMERWRWLPRELPADR-IQVNIAAAVMSVFHDDAPNLTMRA 306

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           + GR   +TP+L S I+ I+ NP W +P SI  K++    R  P YL  N+  +I     
Sbjct: 307 VTGRPGDETPMLQSTIHSIVLNPPWNVPSSIATKELWPKERAHPGYLARNDFIVIP---- 362

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                              +Q  G   A+   K +F +    Y+HDTP    F +  R  
Sbjct: 363 -----------TGEGTSRLQQKAGPKAALGLVKFDFDNPYGVYLHDTPSRSKFESYSRLA 411

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GCVR+   I L   LL  +P W    +E  +   KT    LA  + V  +Y +A+   
Sbjct: 412 SHGCVRLEKPIPLAKQLLASSPDWQPDVVEATIAAGKTVRAPLAQPIAVFLLYWTAYMTP 471

Query: 400 DSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           D  + FRDD YG D V V  I       
Sbjct: 472 DGQMNFRDDPYGWDKVLVQRIAAGAPSA 499


>gi|304397085|ref|ZP_07378964.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304355234|gb|EFM19602.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 603

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 120/459 (26%), Positives = 189/459 (41%), Gaps = 68/459 (14%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETI 75
           YL     +    +    S +   + +   ++VN   +   A  D   I S  P   +   
Sbjct: 135 YLQFVSNVPTQGETWLYSNVPYRLTQPSVAVVNQWQNAVNAGSDNAFIASLQPQHPQ--Y 192

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDL---------- 124
                A+     +  +  WP+L     L  G  S  V  LRE L  SG L          
Sbjct: 193 QPMHAALITL--LSDKQPWPQLKSSETLRPGQVSDDVPALREILQRSGMLTAQVNAPAPN 250

Query: 125 ---------------------DPSKGLSV-----------------------AFDAYVES 140
                                  +  +S                         +D  + +
Sbjct: 251 DDAVPVAASPVTHSDQPVAVSPSAAPVSNLLTPSPQSPGNVQSQTLEGNTANIYDETLVA 310

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ   GLD  G + + T + +NV   +R   L +N+ R++ L +       ++VNI
Sbjct: 311 AVKRFQQWQGLDGDGAIGARTRQWLNVSPQMRASLLALNIQRLRLLPDDMHNG--IMVNI 368

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
              SL     G   L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 369 ANYSLIYYNKGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIIPKVK 428

Query: 261 QDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
            DP YL  +   ++       + +    +DW      +F +R  Q PG+ NA+   K   
Sbjct: 429 LDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVTASSFPYRLIQAPGEANALGRYKFNM 488

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +K  
Sbjct: 489 PSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDA-GWNDARISSTLKEG 547

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            T  V +   +PV+  Y++AW   D   QFR DIY  D+
Sbjct: 548 DTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDD 586


>gi|119471875|ref|ZP_01614183.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
 gi|119445248|gb|EAW26538.1| hypothetical protein ATW7_04554 [Alteromonadales bacterium TW-7]
          Length = 453

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 10/359 (2%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGD 123
                 S + I +TEKAI +YQ+I++RGG+  LP   L  LG++S +V  L  RL    D
Sbjct: 77  YYFDQYSAQLIKRTEKAINWYQEIVNRGGFISLPASELLELGSNSKAVSLLAMRLFQEQD 136

Query: 124 LDPS--KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           L  +        FD ++E AVK FQ RHGL+  G V  +T   +N+  + ++ +L++N  
Sbjct: 137 LRTNVCSKAPCIFDKHIERAVKQFQHRHGLNVDGRVGKNTFAKLNISAEQKLNKLKLNFY 196

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           RI          +YV VNIP   L  V+ G V L++ VIVG+   +TP     I + + N
Sbjct: 197 RITNF-AGSSDEQYVYVNIPEYQLRYVKVGDVKLQNNVIVGKPSWETPAFSDEIEKFVVN 255

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNSPEP--PNF 296
           P W IP SI  +++   + +DP YL  NNI +        + V    +DW+S +P   + 
Sbjct: 256 PEWRIPISIATREIAPKVAEDPDYLVKNNIEIRKNSYIDSQTVNPNNIDWDSIKPYQFDH 315

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
              +  G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+ +   L   +
Sbjct: 316 FLVKRAGEKNPLGEVKYLFPNPEAIYVHDTPAKQRFSQTRRALSHGCIRIEDPFSLAQEI 375

Query: 357 LKDT-PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +K     ++   + +      T    L   +P+H VY +AW  ++ ++ FRDDIY  D 
Sbjct: 376 IKHQGEEYALEQVNDARSENSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYKRDQ 434


>gi|320540487|ref|ZP_08040137.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
 gi|320029418|gb|EFW11447.1| putative murein L,D-transpeptidase [Serratia symbiotica str.
           Tucson]
          Length = 541

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 111/459 (24%), Positives = 191/459 (41%), Gaps = 69/459 (15%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +         S +   +    ++++N  +      R+   ++S +P   +   
Sbjct: 73  YLQFVSAIGTHGNSWLYSNIPYKLGLPPNAVINQWQLAVRQDRLQSYVNSLVPQHPQ--Y 130

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERL-------------IIS 121
            +  +A+     +++   WP++   P L+ G  S  +  LRE L                
Sbjct: 131 TKMYQALRDM--LVNNRPWPQVSNGPNLYPGQLSNDIPALREILMRIDMLTHSAPVAQAR 188

Query: 122 GDLDPSKGLSV------------------------------------------AFDAYVE 139
           G L  ++                                               +   + 
Sbjct: 189 GRLARNEPDDGGLSVGEENNRESLVATSARDITLAAGSTVITQSAASVTVGETVYSPDLV 248

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           + VK FQ   GL+  G++ + T E +NV    R+  L +N+ R++ L         ++VN
Sbjct: 249 AGVKRFQKWQGLNTDGVIGARTREWLNVSPQTRVALLALNIQRLRILPGYI--SSGIMVN 306

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP  S+   +NG+  L S VIVGR  R+TP+++S ++ ++ NP W +P S+++ D++   
Sbjct: 307 IPNYSMTYYQNGREVLSSHVIVGRPSRKTPLMNSGLSNVVLNPPWNVPTSLVRADIVPKA 366

Query: 260 RQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIE 314
            +D  Y + +   ++ +  K    +    +DWNS       +  RQ PG  N++   K  
Sbjct: 367 MRDGSYFQQHGYTLLSDWSKDAKVIDPAMIDWNSVSARNFPYRVRQAPGASNSLGRFKFN 426

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
             S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL D   WS   +   ++ 
Sbjct: 427 MPSSDAIYLHDTPNHNLFQKDMRALSSGCVRVNKADDLANMLLHDA-GWSNDRVASTLQE 485

Query: 375 RKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             TT V +   +PV   Y++AW   D  +QFR DIY  D
Sbjct: 486 GNTTYVNIRQRIPVKLYYLTAWVSDDGQMQFRTDIYNYD 524


>gi|304411335|ref|ZP_07392949.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|307305343|ref|ZP_07585091.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
 gi|304350190|gb|EFM14594.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|306911646|gb|EFN42071.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
          Length = 521

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 181/410 (44%), Gaps = 9/410 (2%)

Query: 22  MGLSLVEKPIHASVLDEI----INESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-IA 76
            GL   E  +  + L       +                      +D+ + +I  +    
Sbjct: 108 FGLYYRELTLSPNTLSAADMARVQADVAGYWRYIKTFAQCNNGAPVDTVLTVIPTDLHYQ 167

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +  K +     + +   W  L     L +G S   +  + +RL + GDL      +  + 
Sbjct: 168 RVLKQVTHLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIEPKTNFVYS 227

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +   VK FQ RHGL   G++   TL  +N     R   L  N +R +   E+K+   Y
Sbjct: 228 EELVVGVKRFQQRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ERKLEPSY 286

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +L+N+PA  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++D+
Sbjct: 287 LLINVPAFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDI 346

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKI 313
           +  +R++  YL +    + D  G+ V     +W   +     +   Q PG  NA+   K 
Sbjct: 347 LPQIRRNGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKF 406

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F +  + Y+H T EP LFN   R  +SGC+R+  + +L  W  +      R   +    
Sbjct: 407 HFDNSFSVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLAPD 466

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             +     L+ ++PVH VY++AW       Q+R DIY L+      +P  
Sbjct: 467 VTEPQWFSLSQKLPVHLVYLTAWLDDSGQEQYRSDIYHLEAELTNAVPAT 516


>gi|256830357|ref|YP_003159085.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256579533|gb|ACU90669.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 543

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 103/417 (24%), Positives = 180/417 (43%), Gaps = 26/417 (6%)

Query: 29  KPIHASVLD-EIINESYHSIVNDRFDN--------FLARVDMGIDSDIPIISKETIAQTE 79
           + +H   +D   I E++     DRFD            R+   +    P +      +  
Sbjct: 124 RDLHFGQIDPRQIQENFTPPAPDRFDPLAHLQRAVREKRLREAVREAAPQVP--LYGRLR 181

Query: 80  KAIAFYQDILSRG----GW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +A+A Y+ +         W    P LP   L +G S   +  +  RLI  GDL     ++
Sbjct: 182 EALAQYRQLSEDPVFSQLWQSSLPPLPNGKLEIGESYAGMPLVVLRLIALGDLPRETVMT 241

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             ++ ++   +  FQ+RHGL+P G++   T   + V    R+RQ+++++ R++       
Sbjct: 242 ERYEGHIVKGIMDFQVRHGLEPDGVIGRKTYAQLGVTPSARVRQIELSMERLRWTP-LLH 300

Query: 192 GLRYVLVNIPAASLEAVE--NG--KVGLRSTVIVGRVDRQ-TPILHSRINRIMFNPYWVI 246
             R + VNIP   LEA E  NG  +V     VI+G      TP+   R+  I F+PYW +
Sbjct: 301 APRMIAVNIPEHVLEAYEVQNGTVQVQTTMRVIIGSALNMRTPLFDGRMRSIEFSPYWNV 360

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD-WNSPEPPNFIFRQDPGKI 305
           P SI + +++  + +DP Y        +   G+ +    +D   +        RQ PG  
Sbjct: 361 PLSIARSEVVPKILRDPSYFVRQGFEFVAADGQIITTLSMDDLEAVRSGQMRIRQRPGPR 420

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F ++++ ++H TP   LF    R  + GC+RV + + L  ++L+    W  
Sbjct: 421 NALGDIKFIFPNKDSIFLHHTPTTHLFEKQRRDLSHGCIRVEDPVGLAKFVLQHDQVWGE 480

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             I E +    ++ ++L     V   Y +        + F  DIYG D +    +  
Sbjct: 481 ERIREAMSAGVSSTLRLREPPQVVLAYNTVQVKNGGRVHFFQDIYGQDKLLDQALRR 537


>gi|332525152|ref|ZP_08401329.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
 gi|332108438|gb|EGJ09662.1| peptidoglycan-binding domain-containing protein [Rubrivivax
           benzoatilyticus JA2]
          Length = 547

 Score =  342 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 187/428 (43%), Gaps = 22/428 (5%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHSIVNDR--FDN--FLARVDMGIDSDIPIISKETIAQ 77
               L +  +    L   +        + R   D       + + +    P++ +   A+
Sbjct: 124 YLSDLHQGRLDPRTLYRSLTLPERPPFDARAVLDAGLAAGSLALAVRRAEPVLPQ--YAE 181

Query: 78  TEKAIAFYQDILSRGGW----PELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
             +A+A Y+ +     W    P LP     R L  G +   +  L  RL+  GDL     
Sbjct: 182 LRQALARYRTLEHDPAWAAPLPPLPQVGRTRKLEPGAAWPGLPALAARLVALGDLPAGPH 241

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +   V+ FQ RHG+   G++ ++T   + V    R  QL + L R++     
Sbjct: 242 AGTVYAEPLVGGVRRFQQRHGVSADGVIGAATFSRLEVKPAARAEQLVLALERLRWTPLL 301

Query: 190 KMGLRYVLVNIPAASLEAVE--NGK--VGLRSTVIVGRV-DRQTPILHSRINRIMFNPYW 244
           +   R V+VNIP   L A E  +G+  V  R  V+VG+  D++TP++ +++  I F+PYW
Sbjct: 302 E-SRRMVVVNIPEFVLRAYEVQDGRITVVQRMRVVVGQALDKRTPLIDAQMRAIEFSPYW 360

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV-FVEEVDWNSPEPPNFIFRQDPG 303
            +P SI++ + +  LR+DP YL       +   G     V     ++     +  RQ PG
Sbjct: 361 NVPPSIVRAETLPKLRRDPDYLAREGFEFVAGDGSVHGEVSAEALDALAAGRWRIRQRPG 420

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   K  F +    Y+H TP   LF    R  + GCVR+ + + L +++L+D P W
Sbjct: 421 PRNALGDIKFVFPNAEQIYLHHTPSTALFARDRRDFSHGCVRIEDPLALAMFVLRDQPDW 480

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
               I E +   ++  ++LAT V V   Y +A   KD  + F DDIY  D      +   
Sbjct: 481 PEARIREAMDAGESRTLRLATPVRVLIAYGTALV-KDGQVYFFDDIYRQDPRLQAALRER 539

Query: 424 EDHPIDSD 431
               + +D
Sbjct: 540 AAPAVRAD 547


>gi|254437318|ref|ZP_05050812.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
 gi|198252764|gb|EDY77078.1| Putative peptidoglycan binding domain protein [Octadecabacter
           antarcticus 307]
          Length = 541

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 12/411 (2%)

Query: 18  LILPMGLSLVEKPIHA-SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L L     +    +   SV+ EI  E       +    FL        + +P  S E  A
Sbjct: 127 LFLSYANDIQTGILTPRSVVSEIRREVPLRSRLEYLQGFLGSTPASYLATLPPSSSE-YA 185

Query: 77  QTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +  +     + +L+ GGW P +    L  G S   V  LR+RL+  G ++ S      +D
Sbjct: 186 RLLREKMTLERLLANGGWGPSVSSSSLAAGASGAGVVALRDRLVAMGHMERSAT--QTYD 243

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +++AV+ FQ  HGL   G   ++TL  +NVP   R++Q+ V + R +  + +  G R+
Sbjct: 244 VTIQAAVQRFQQAHGLTADGDAGAATLAEINVPAASRLQQIIVAMERERW-MNRPRGERH 302

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           V VN+   S   ++N  V  ++  ++G     RQTP     ++ ++ NP W +PRSII  
Sbjct: 303 VWVNLVDFSAAIMDNDSVTFQTRSVIGATGSGRQTPEFSDVMDHMVINPSWFVPRSIIVG 362

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAST 311
           + +  +++    +   +I + D  G+ V    V++++     F F  RQ P   NA+   
Sbjct: 363 EYLPAMQRSRDAIS--HILLTDGNGRTVNRGNVNFSNYTARTFPFSMRQPPSSRNALGLV 420

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K  F ++ N Y+HDTP   LF   +R  + GC+R+ +  +    LL         + + +
Sbjct: 421 KFMFPNQYNIYLHDTPAKSLFAREIRAYSHGCIRLNDPFEFGHALLAAQEADPEGYFQRI 480

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + +   T V L   VPVH VY +A++     + FR DIY  D+     +  
Sbjct: 481 LNSGTETRVNLVDPVPVHIVYRTAFTHTTGQLNFRRDIYDRDSRIWNALAN 531


>gi|146292990|ref|YP_001183414.1| peptidoglycan binding domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145564680|gb|ABP75615.1| Peptidoglycan-binding domain 1 protein [Shewanella putrefaciens
           CN-32]
          Length = 484

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 4/377 (1%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGN 106
                        M  +++   +S        K I+    + S+  W  L     L +G 
Sbjct: 102 WQHISALSGCDAVMTNNTNADPMSDIHYQAVLKKISQLIQLESQFSWETLMLENKLTVGQ 161

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   V  + +RL + GD+     +   +   +   +K FQ+RHGL   G++   TL  +N
Sbjct: 162 THPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLN 221

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                R   L  N +R + +  +K+  RY+L+N+PA  ++ VE  +  L S VIVG+  R
Sbjct: 222 QSPRQRAVLLARNELRQR-IFSRKLTPRYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSR 280

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           QTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D    + D  G+ +F    
Sbjct: 281 QTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQDREFDVYDYSGQLIFHTPE 340

Query: 287 DWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W   +     +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+
Sbjct: 341 EWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGTSEPALFKRENRALSSGCI 400

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           R+  + +L  W  ++                      L+ ++PVH VY +AW        
Sbjct: 401 RIEKVNELAQWFKRNLVKDKGLWDRLAPNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDH 460

Query: 405 FRDDIYGLDNVHVGIIP 421
           +R+DIY L+      + 
Sbjct: 461 YRNDIYHLEAEFTNAVT 477


>gi|304415070|ref|ZP_07395810.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
 gi|304283074|gb|EFL91497.1| peptidoglycan binding domain-containing hypothetical protein
           [Candidatus Regiella insecticola LSR1]
          Length = 421

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 23/376 (6%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQ 112
                +   + S  P   +       + +           WP+LP    L  G   V++ 
Sbjct: 42  LQQGNIAEYMASLTPQHPQ--YKNMRQVLKKLLS-EQHQPWPQLPNGSNLIPGKRDVNLP 98

Query: 113 RLRERLIISG----------DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            L + L  +           DL P   +   ++  + +AVK FQ   GL P G++ + T 
Sbjct: 99  ILHKILSHANTWLTATTPVTDLPPPS-VDTLYNPALVAAVKRFQQAQGLTPDGIIGTGTR 157

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +N+    R   L +N+ R++ L         ++VNI   SL   + G   L S VIVG
Sbjct: 158 KWLNLSPQKRATLLALNMQRLRILPADMK--TGIMVNIADYSLHYYQEGNEILSSAVIVG 215

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---K 279
           R  R+TP + S ++ ++ NP W +P S+++ D++  ++ D  YLK +   ++       K
Sbjct: 216 RPSRKTPFMSSALSNVVINPQWKVPTSMVKNDILPKVKYDATYLKQHGYTILTNWNNNAK 275

Query: 280 EVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
            +    ++W+  S     +  RQ PG  N++   K    S ++ Y+HDTP   LF     
Sbjct: 276 IIDPSTINWHLISANNFPYRLRQAPGTNNSLGRYKFNMPSSDSIYLHDTPNHRLFQKETL 335

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVRV     L   LLKD   W    +   +K   TT V +   +PV   Y+++W 
Sbjct: 336 ALSSGCVRVHKAAILAKMLLKDA-GWDDTRLSNTLKQGNTTYVNIRQHLPVLLYYLTSWV 394

Query: 398 PKDSIIQFRDDIYGLD 413
            K+  +QFR DIY  D
Sbjct: 395 DKEGKVQFRTDIYNYD 410


>gi|319426480|gb|ADV54554.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens 200]
          Length = 484

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 4/377 (1%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGN 106
                        M  +++   +S        K I+    + S+  W  L     L +G 
Sbjct: 102 WQHISALSGCDAVMTNNTNADPMSDIHYQAVLKKISQLIQLESQFSWETLMLENKLTVGQ 161

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   V  + +RL + GD+     +   +   +   +K FQ+RHGL   G++   TL  +N
Sbjct: 162 THPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLN 221

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                R   L  N +R + +  +K+  RY+L+N+PA  ++ VE  +  L S VIVG+  R
Sbjct: 222 QSPRQRAVLLARNELRQR-IFSRKLTPRYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSR 280

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           QTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D    + D  G+ +F    
Sbjct: 281 QTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQDREFDVYDYSGQLIFHTPE 340

Query: 287 DWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W   +     +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+
Sbjct: 341 EWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGTSEPALFKRENRALSSGCI 400

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           R+  + +L  W  ++                      L+ ++PVH VY +AW        
Sbjct: 401 RIEKVNELAQWFKRNLVKDKGLWDRLAPNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDH 460

Query: 405 FRDDIYGLDNVHVGIIP 421
           +R+DIY L+      + 
Sbjct: 461 YRNDIYHLEAEFTNAVT 477


>gi|120598924|ref|YP_963498.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559017|gb|ABM24944.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. W3-18-1]
          Length = 484

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 4/377 (1%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGN 106
                        M  +++   +S        K I+    + S+  W  L     L +G 
Sbjct: 102 WQHISALSGCDAVMTNNTNADPMSDIHYQAVLKKISQLIQLESQFSWETLMLENKLTVGQ 161

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   V  + +RL + GD+     +   +   +   +K FQ+RHGL   G++   TL  +N
Sbjct: 162 THPIVNTIAKRLWLLGDMPKEVDVEQVYTDELMLGIKRFQLRHGLQTDGVIGKQTLYWLN 221

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                R   L  N +R + +  +K+  RY+L+N+PA  ++ VE  +  L S VIVG+  R
Sbjct: 222 QSPRQRAVLLARNELRQR-IFSRKLTPRYLLINVPAFEMKLVEQEQTVLTSKVIVGKSSR 280

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           QTPIL S+I+ I+ NP W +P SI+++D++  +R+D  YL+D    + D  G+ +F    
Sbjct: 281 QTPILDSQISSIVLNPSWRVPSSILRRDILPHIRKDGYYLQDREFDVYDYSGQLIFHTTE 340

Query: 287 DWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           +W   +     +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+
Sbjct: 341 EWQELASSRFPYQLVQRPGPKNALGKYKFHFDNSFSVYLHGTSEPALFKRENRALSSGCI 400

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           R+  + +L  W  ++                      L+ ++PVH VY +AW        
Sbjct: 401 RIEKVNELAQWFKRNLVKDKGLWDRLAPNVTDPQWFALSEKLPVHLVYWTAWLDDKGQDH 460

Query: 405 FRDDIYGLDNVHVGIIP 421
           +R+DIY L+      + 
Sbjct: 461 YRNDIYHLEAEFTNAVT 477


>gi|254473448|ref|ZP_05086845.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
 gi|211957564|gb|EEA92767.1| peptidoglycan-binding domain 1 protein [Pseudovibrio sp. JE062]
          Length = 625

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 20/422 (4%)

Query: 19  ILPMGLSLVEKPIHA-SVLDEIINESYHSIVNDRFD--NFLARVDMGIDSDIPIISKETI 75
               G  +    +    VL  +        +ND          +    D   P     + 
Sbjct: 199 FATYGAHIAGGVVRPTKVLKNVFISPQVPKLNDMLTQMEETRSLAQFFDGLEP--EAPSY 256

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD--------- 125
              +  +A Y   L+      +   P + LG++   V +L +RL   G            
Sbjct: 257 DILKDQLARYNAALTSDYPVYIEDGPSIRLGDTGGRVAQLEKRLQAEGYAPYYSDYTGTS 316

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            ++     ++  +   VK FQ RHGL   G+V   T  A+N  ++ R  Q+ VNL R++ 
Sbjct: 317 ETEVPPTFYNDDMVELVKDFQKRHGLTVDGVVGKKTRAALNASLEDRRNQILVNLERMRW 376

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                 G RYV VN+    +  +E   V   +  +VG+    TP+          NP W 
Sbjct: 377 DDPLPSG-RYVKVNVAEQMVRVMEGTDVLYETRSVVGKPRNATPLFSDTFEYAEINPTWG 435

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPG 303
           +P SI   + +  LR++   L    I++  + GK V    ++W++       +  RQ  G
Sbjct: 436 VPWSIATNEYLPKLRKNASALSGTGINVY-KNGKRVDPTAINWSNVSKRKFGYQLRQKAG 494

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
           + NA+ + K  F +++N Y+HDTP   LFN   R  + GC+RV++       LL  +   
Sbjct: 495 RKNALGAVKYMFPNKHNIYLHDTPSKRLFNKDQRAFSHGCIRVQDPFTFGEVLLSGS-GH 553

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           SR  +E++    KT  +KL   VPVH  Y +A++  D  +QFR+DIY  D   +  +   
Sbjct: 554 SRAKMEKLRARGKTVRLKLTETVPVHLRYYTAFAGVDGELQFREDIYKQDKAILEALLTS 613

Query: 424 ED 425
           +D
Sbjct: 614 QD 615


>gi|237807403|ref|YP_002891843.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
 gi|237499664|gb|ACQ92257.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
          Length = 514

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 10/364 (2%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRE 116
              D  I+   P    E      + +        +  WP LP   +  G+S  ++  +R 
Sbjct: 138 TDPDSAINKLRPQT--ENYLTNRRVLLSLLSESRKAPWPALPALKVRPGDSHDALPVIRN 195

Query: 117 RLIISGDLDPSKGLSV-----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
            L+ SGDL  +           +D     AV+ FQ RHGLD  G++   TL  + +P  +
Sbjct: 196 ILLRSGDLQANTLTPQQMQLTTYDVQTVQAVEHFQQRHGLDADGVIGRRTLNWLRLPPQV 255

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R   L  +++R   L +     RYVLVNIP   L  ++  +    S VIVG++ RQTPIL
Sbjct: 256 RAVILARSILRSD-LPQNMSSRRYVLVNIPEFRLRVLDKKQEIFSSRVIVGQIKRQTPIL 314

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN-S 290
            S I+ I+ NP W +P SI+QKD++  L +D  +L      ++D +G  V    + W+ +
Sbjct: 315 SSEISSIVVNPAWHVPASILQKDLVPKLAKDKHFLDKGQFELVDSQGITVDPAAMVWDGT 374

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E   +  RQ PG  NA+   K    + +  Y+H T  P  F   +R  +SGCVRV    
Sbjct: 375 EENFPYQLRQKPGDHNALGRYKFYLPNNDAIYLHSTSSPGYFKRDLRALSSGCVRVEEAD 434

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           D    LLKD+  W+   +++++K   T  + +   VPV+ VY  +W  K   +QFRDDIY
Sbjct: 435 DFARLLLKDSK-WNINKLDQMLKEDTTKWLSMTDPVPVYTVYWRSWVDKQGQLQFRDDIY 493

Query: 411 GLDN 414
             ++
Sbjct: 494 QFED 497


>gi|157961780|ref|YP_001501814.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846780|gb|ABV87279.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 451

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 100/343 (29%), Positives = 168/343 (48%), Gaps = 4/343 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +     +  I   Q +  +  W  +    L   G S+  +  +  RL + GD   +   S
Sbjct: 106 DGYLHLQNRIRHLQWLAEQDWWQVIESERLIRPGESNPIIPDVVRRLWLLGDASSAATGS 165

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
              +  +  A+K FQ+RHGL    ++   TL+ +NVP + R   L  N ++  + + Q+ 
Sbjct: 166 NELNLPIVDALKRFQLRHGLKADAIIGPETLKWLNVPPEQRASILAKNFIQRAEFMAQR- 224

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             R++++NIPA  +E  ++G++ L S VIVG+  R TPIL S I+ ++ NP W +P+ I+
Sbjct: 225 DDRFLVINIPAFEMELFDHGELELASRVIVGKPYRPTPILSSSISNVVINPSWRVPKKIM 284

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMA 309
             D++  +R+D  Y+   N  + D     V      W+      F FR  Q PG  N + 
Sbjct: 285 YNDLLPQVRKDGNYISQRNFDVFDRNNNLVMRTAEQWSDLAKGPFPFRFVQRPGTNNTLG 344

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  + Y+HDT +P LF    R  +SGC+R+ N+  L  W+  +     +  ++
Sbjct: 345 RYKFYFPNDFSVYLHDTSDPKLFQRSNRALSSGCIRIENVQGLANWMAANLVKDKQTWVD 404

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
                ++T    L + + VH VY +AW    +  Q+RDDIY L
Sbjct: 405 RHADRKRTQWFALKSSLNVHLVYWTAWIDGSNQAQYRDDIYQL 447


>gi|260753690|ref|YP_003226583.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|258553053|gb|ACV75999.1| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 502

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 178/382 (46%), Gaps = 20/382 (5%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
           + Y    + +       +     +  P  S    A  +  + +Y+ I  +GGWP +P   
Sbjct: 128 DPYDPWPDFKNAVNSNTLGDWAANLPPPYS--GYAGLKNGLIYYRAIAEKGGWPVVPTGA 185

Query: 102 -LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+ +  V+ LR RL I  D +     S  FDA +++AVK  Q R+GL+P+G+V   
Sbjct: 186 DLTVGSDNPRVKTLRRRLAIE-DKELPDNGSSHFDAALKAAVKRAQQRYGLNPTGVVSGQ 244

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL+A+N PV  RI Q+  N+ R + L  + +    + VN+ AA L   E  +  +    +
Sbjct: 245 TLQALNQPVKSRIHQIMANMERWRWLP-RNLPENRIQVNVAAAVLTLFEKNQPVMSMKSV 303

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            GR   +TP+L S I  ++ NP W +P SI +K++    +  P YL+     +I E G+ 
Sbjct: 304 TGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKELWPKEKAHPGYLQAAGFKIIGESGQ- 362

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                             +Q PG  N++   K +F +  + Y+HDTP    F+   R E+
Sbjct: 363 --------------GQRLQQKPGPRNSLGQLKFDFPNSYSVYLHDTPGRGAFSRYGRLES 408

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GC+R+ + + L   LL   P W+   +   +   +T  V+L   V V   Y +A+   +
Sbjct: 409 HGCIRLEHPVALGERLLAADPAWTGDRLRSEIDKNETERVRLKQPVAVFLFYWTAFGNGE 468

Query: 401 SIIQFRDDIYGLDNVHVGIIPL 422
           + + FR D Y  D +    I  
Sbjct: 469 NALSFRSDPYKWDELLAQKIEA 490


>gi|213160796|ref|ZP_03346506.1| hypothetical protein Salmoneentericaenterica_12358 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 397

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 111/382 (29%), Positives = 169/382 (44%), Gaps = 51/382 (13%)

Query: 78  TEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP---------- 126
              A+     +     WP+L     L  G  S  V  LRE L  +G LD           
Sbjct: 3   MHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDN 60

Query: 127 -------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                                              + A+D  +  AVK FQ   GL   G
Sbjct: 61  TSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADG 120

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG   L
Sbjct: 121 VIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQVL 178

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   ++ 
Sbjct: 179 ASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMR 238

Query: 276 EKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
               +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP   L
Sbjct: 239 GWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHNL 298

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +   +PV+  
Sbjct: 299 FQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNIRQNIPVNLY 357

Query: 392 YISAWSPKDSIIQFRDDIYGLD 413
           Y++A+   D  +Q+R DIY  D
Sbjct: 358 YLTAFVGADGRMQYRTDIYNYD 379


>gi|153000449|ref|YP_001366130.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS185]
 gi|151365067|gb|ABS08067.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS185]
          Length = 521

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 106/404 (26%), Positives = 179/404 (44%), Gaps = 6/404 (1%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS-KETIAQTEKAI 82
           L+L    + A+ +   +                      +D+   +I       +  K +
Sbjct: 115 LTLSPNTLSAAEMAR-VQADVAGYWRYIKTFAQCNNGAPVDTVSTVIPTDAQYQRVLKQV 173

Query: 83  AFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
                + +   W  L     L +G S   +  + +RL + GDL      ++ +   +   
Sbjct: 174 THLVQLDATEPWETLVLDEKLTVGMSHPLLDTIAKRLWLLGDLAIEPMTNLVYSEELVVG 233

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ RHGL   G++   TL  +N     R   L  N +R +   E K+   Y+L+N+P
Sbjct: 234 VKRFQHRHGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVF-ESKLEPSYLLINVP 292

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R+
Sbjct: 293 AFEMILVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRR 352

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +  YL +    + D  G+ V     +W   +     +   Q PG  NA+   K  F +  
Sbjct: 353 NGHYLNERQFDVYDYNGQLVQHMPEEWQGLASTSFPYQLVQRPGAKNALGKYKFHFDNSF 412

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+H T EP LF+   R  +SGC+R+  + +L  W  +      R   +      +   
Sbjct: 413 SVYLHGTSEPSLFSKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLAPDVTEPQW 472

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             L+ ++PVH VY +AW       Q+R DIY L+      +P  
Sbjct: 473 FSLSQKLPVHLVYWTAWLDDSEQEQYRSDIYHLEAELTNAVPAT 516


>gi|217973562|ref|YP_002358313.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|217498697|gb|ACK46890.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
          Length = 525

 Score =  339 bits (870), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 106/404 (26%), Positives = 179/404 (44%), Gaps = 6/404 (1%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-IAQTEKAI 82
           L+L    + A+ +   +                      +D+   +I  +    +  K +
Sbjct: 119 LTLSPNTLSAADVAR-VQADVTGYWRYIKTFAQCNNGAPVDTVPTVIPTDLQYQRVLKQV 177

Query: 83  AFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A    + +   W  L     L +G S   +  + +RL   GDL      +  +   +   
Sbjct: 178 AHLVQLDATDPWETLVLDEKLTVGMSHPLLDTIAKRLWRLGDLAIEPMTNFVYSEELVVG 237

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ +HGL   G++   TL  +N         L  N +R +   E+K+   Y+L+N+P
Sbjct: 238 VKRFQQKHGLKQDGVIGKQTLYWLNQSPKASAVLLAKNTIRQRVF-ERKLEPSYLLINVP 296

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  +  V+NG   L S VIVG+  RQTP+L S+I+ ++ NP W +P SI+++D++  +R+
Sbjct: 297 AFEMFLVDNGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRR 356

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +  YL +    + D  G+ V     +W   +     +   Q PG  NA+   K  F +  
Sbjct: 357 NGHYLNERQFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSF 416

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+H T EP LFN   R  +SGC+R+  + +L  W  +      R   +      +   
Sbjct: 417 SVYLHGTSEPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLAPDVTEPQW 476

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
             L+ ++PVH VY +AW       Q+R DIY L+      +P  
Sbjct: 477 FSLSQKLPVHLVYWTAWLDDSGQEQYRSDIYHLEAELTNTVPAT 520


>gi|308186271|ref|YP_003930402.1| hypothetical protein Pvag_0751 [Pantoea vagans C9-1]
 gi|308056781|gb|ADO08953.1| Uncharacterized protein ycbB [Pantoea vagans C9-1]
          Length = 603

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 120/459 (26%), Positives = 188/459 (40%), Gaps = 68/459 (14%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           YL     +    +    S +   + +   ++VN   +   A   D  I S  P   +   
Sbjct: 135 YLQFVSNVPTQGETWLYSNVPYRLTQPSVAVVNQWQNAVNAGSADTFIASLQPQHPQ--Y 192

Query: 76  AQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLI--------------- 119
                A+     +  +  WP+L     L  G  S  V  LRE L                
Sbjct: 193 QLMHVALKAL--LSDKQPWPQLKSSETLRPGQVSDDVPALREILQRSGMLTAQVNAPAPD 250

Query: 120 --------------------------ISGDLDPSKGLSV-------------AFDAYVES 140
                                     ++  L PS                   +D  + +
Sbjct: 251 DDAVPAAPVPVSHSDQPVAVSPSAAPVTNLLTPSPQSPGNIQTSTLEGNTANVYDETLVA 310

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
            VK FQ   GLD  G + + T + +NV   +R   L +N+ R++ L +       ++VNI
Sbjct: 311 GVKRFQQWQGLDGDGAIGTRTRQWLNVSPQMRASLLALNIQRLRLLPDDMHNG--IMVNI 368

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
              SL    NG   L S VIVGR DR+TP++ S +N ++ NP W +P ++++KD++  ++
Sbjct: 369 ANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRKDIIPKVK 428

Query: 261 QDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
           QDP YL  +   ++       + +    +DW      +F +R  Q PG  NA+   K   
Sbjct: 429 QDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVSAASFPYRMIQAPGVANALGRYKFNM 488

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D   W+   I   +K  
Sbjct: 489 PSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDA-GWNDSRISSTLKEG 547

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            T  V +   +PV+  Y++AW   D   QFR DIY  D+
Sbjct: 548 DTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDD 586


>gi|312887255|ref|ZP_07746859.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300567|gb|EFQ77632.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 544

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 99/391 (25%), Positives = 174/391 (44%), Gaps = 21/391 (5%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            AS                  D+ +        +  P+  +         +  Y  +  R
Sbjct: 166 TASSSARWYLPRKKVNYAQYLDSLIKMPSKQAAAAEPVYRQ--YELLRSYLRKYYLLNER 223

Query: 92  GGWP--ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             W    L  +    G+++  +  +++RL +  D      L  A++A +++A+  FQ R+
Sbjct: 224 DKWSNITLTGKVFKPGDTAAVIATVKKRLYLLEDFKGD-TLDRAYNADLDTAILQFQSRN 282

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL  +G+++  T+  MNVP+  RI+Q+ VN+ R + L    +   Y+ VNIP   L    
Sbjct: 283 GLLANGLLNKETVAEMNVPLKKRIQQILVNMERCRWLP-ISLNSDYLAVNIPEFKLHVFH 341

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
              +     V+VG+   QT + +  +  ++F+PYW +P SI+QK+++  +++   YL  +
Sbjct: 342 ADSLLWSCNVVVGQTMHQTTVFYGDVKYVVFSPYWNVPPSIVQKEVVPEMKRHRDYLSTH 401

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            + +                         RQ PG  N++   K  F +  N Y+HDTP  
Sbjct: 402 RMQI---------------TGYADGLPTIRQLPGPENSLGLVKFLFPNSYNIYLHDTPSK 446

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  + GC+RV+N   L  +LLKD   W    I+  +   K   V L  +VPV 
Sbjct: 447 SLFGESARAFSHGCIRVQNPTKLANFLLKDQKNWDAQKIDVAMHAGKEQYVTLQNKVPVF 506

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             Y +A++  ++ + FR DIY LD+    ++
Sbjct: 507 IAYFTAFTDGNNKLNFRKDIYNLDDHLASML 537


>gi|241762099|ref|ZP_04760182.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373349|gb|EER62949.1| Peptidoglycan-binding domain 1 protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 502

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 23/407 (5%)

Query: 20  LPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L    ++    + AS  D    +  + Y    + +       +     +  P  S    A
Sbjct: 103 LDYARAIHSGRLSASDFDKNWGMKPDPYDPWPDFKNAVNNNTLGDWAANLPPPYS--GYA 160

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S  FD
Sbjct: 161 GLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGSSHFD 219

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R + L  + +    
Sbjct: 220 AALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWRWLP-RNLPENR 278

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K++
Sbjct: 279 IQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKEL 338

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
               +  P YL+     +I E G+                   +Q PG  N++   K +F
Sbjct: 339 WPKEKAHPGYLQAAGFKIIGESGQ---------------GQRLQQKPGPRNSLGQLKFDF 383

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +   
Sbjct: 384 PNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDKN 443

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +T  V+L   V V   Y +A+   ++ + FR D Y  D +    I  
Sbjct: 444 ETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDELLAQKIEA 490


>gi|256823023|ref|YP_003146986.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
 gi|256796562|gb|ACV27218.1| ErfK/YbiS/YcfS/YnhG family protein [Kangiella koreensis DSM 16069]
          Length = 570

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 119/376 (31%), Positives = 188/376 (50%), Gaps = 12/376 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRE 116
            +     +  P  S +   +  K +A  +       WP + ++P +    +   ++ +  
Sbjct: 196 NLFDYFRALAP--SSQEYIELRKYLAELRSRTVS-PWPAIDLQPSIKPQMADPRLEAIAV 252

Query: 117 RLIISGDLDPS----KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           RL+  GDL           + ++  +  AV+ FQ+RHGL   G++   T+ A+N+    R
Sbjct: 253 RLMFWGDLPADWAYLAPFPMRYEDGLIRAVEHFQLRHGLVADGVLGKKTIAALNITPQQR 312

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           I QL VNL +I+   E K   R + VNIP+  L A+ENG+V LR  VIVG++ R+TPI  
Sbjct: 313 IEQLVVNLEQIRWH-ELKPASRLIKVNIPSFELLALENGEVRLRMPVIVGQLKRKTPIFE 371

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
            +I  ++ NP WV+P  +  KD + L++Q+PQYL DN   +  +  K      +DW    
Sbjct: 372 EKIQYLVLNPTWVVPWELATKDKLPLIQQNPQYLLDNQFSVYLQDFKIEDPTRIDWAQVT 431

Query: 293 --PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +   Q PG  NA+   K  F +    Y+HDTP+  LFNN +R  +SGC+R++  +
Sbjct: 432 RANFPYRLVQAPGSGNALGQVKFMFPNPYEVYLHDTPDKSLFNNELRAFSSGCIRIQRPL 491

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           DL  W+L+ T  +S   IE  +  + T  + L + VP+   Y +A+   D  IQFR DIY
Sbjct: 492 DLLWWILR-TNGFSDIDIENQLNKKHTNTISLTSPVPIRLEYRTAYWGLDQTIQFRADIY 550

Query: 411 GLDNVHVGIIPLPEDH 426
             D      +  P   
Sbjct: 551 QRDTKLYQALQQPATR 566


>gi|158422063|ref|YP_001523355.1| hypothetical protein AZC_0439 [Azorhizobium caulinodans ORS 571]
 gi|158328952|dbj|BAF86437.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 649

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 98/333 (29%), Positives = 163/333 (48%), Gaps = 14/333 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +P  P L  G+    V  LR RL     L  +      +DA +  AV  FQ   GL+  
Sbjct: 310 RVPGGPTLRPGDMDARVPALRARLG----LKSATASDRLYDADLARAVAAFQGASGLNAD 365

Query: 155 GMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           G+V  STLE +N       R   +  N+ R + L  + +G  +V+VNIP   +  V++GK
Sbjct: 366 GVVGPSTLEVLNRVENPAERRADIIANMERWRWLP-RDLGSVHVMVNIPEFVVRVVDDGK 424

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
              ++ V+VG+ + QTP+L   +  ++ NPYW IP SI +K+M+  L++DP +L    + 
Sbjct: 425 TIHQTRVVVGKPENQTPLLTHDMEYVVLNPYWNIPPSIARKEMLPNLQRDPYFLARQGME 484

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           ++ + G+ V    V+W       + FRQ PG+ NA+   K  F + ++ Y+HDTP   LF
Sbjct: 485 VV-KNGRVVDPGTVNWAQGTGG-YSFRQPPGERNALGRIKFMFPNDHSVYLHDTPSKALF 542

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            N  R  + GC+RV++ +     +         W+   I +++       + L   +PVH
Sbjct: 543 ANDRRAYSHGCIRVQDPLKFAEVIFNIGMPGQGWTDEKIGKML-GGAERYLTLKQRIPVH 601

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            VY + +      +  R+D+YG +      + L
Sbjct: 602 LVYFTTFVDDSGRLVSREDVYGTNAKVKEALGL 634


>gi|332532859|ref|ZP_08408732.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332037705|gb|EGI74156.1| hypothetical protein PH505_aj00520 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 441

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 114/359 (31%), Positives = 177/359 (49%), Gaps = 10/359 (2%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGD 123
                 S + I +TEKAI +YQ+I+++GG+  L     L LG+++  V  L +RL    D
Sbjct: 65  YYFDQYSAQLIERTEKAINWYQEIVNKGGFTHLYNDELLELGSNNKQVSLLAQRLYQERD 124

Query: 124 LDPSKGLSVA--FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           L  +        FD  +E AVK FQ RHGL   G V   T  ++NVP   ++ +L++N  
Sbjct: 125 LKTNVCDEAICTFDKDIEQAVKQFQSRHGLKVDGRVGKRTFASLNVPAQQKLDKLKLNFY 184

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           RI          +YV VNIP  SL  V+ G V L++ VIVG+   +TP     I + + N
Sbjct: 185 RITNFAGAS-DEQYVYVNIPEYSLRFVKAGDVKLKNNVIVGKPSWETPAFSDEIEKFVVN 243

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNSPEP--PNF 296
           P W IP SI  K++   + +DP YL  NNI +        + V    +DW+S +P   + 
Sbjct: 244 PEWRIPTSIATKEIAPKVAEDPDYLVKNNIEIRKNSYLDSQTVNPSNIDWDSIKPYQFDH 303

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
              +  G+ N +   K  F +    Y+HDTP    F+   R  + GC+R+     L   +
Sbjct: 304 FLVKRAGEENPLGEVKYLFPNAEAIYVHDTPAKHRFSQANRALSHGCIRIEKPFSLAREI 363

Query: 357 LK-DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +K +    +  +++  +    T    L   +P+H VY +AW  ++ ++ FRDDIY  D 
Sbjct: 364 IKYEGEAQTLNNMDTALAQNSTQTFYLDEPLPIHLVYWTAWVDENKLVNFRDDIYQRDK 422


>gi|146299088|ref|YP_001193679.1| hypothetical protein Fjoh_1328 [Flavobacterium johnsoniae UW101]
 gi|146153506|gb|ABQ04360.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 539

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 107/378 (28%), Positives = 178/378 (47%), Gaps = 29/378 (7%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-----IRPLH 103
           +   D+ +   +     +  + S+    + +  +  Y++I   G W ++       + L 
Sbjct: 177 DRILDSLMGDPNRLNKDENLLFSQ--YYKLQNVLQRYRNIEKNGLWKKIEIDEANYKELK 234

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +S   VQ++RERL + GDL      S  +D  +  AV  ++ R+GL  +       ++
Sbjct: 235 PLDSGKVVQQIRERLFVVGDLKEDSK-SQYYDQEMMDAVLKYKKRYGLKLNYTFTKEQID 293

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            MN P+  RIR + +N+ R + +  +      YV+VNIP+  L  V++GK  L S V VG
Sbjct: 294 QMNEPISNRIRTIMLNMERCRWIPTKLAKADEYVMVNIPSFRLIYVKDGKYDLVSDVFVG 353

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
               +T I    I+RI+F+PYW +P SII+ ++   + +D  YL D+N+           
Sbjct: 354 TRMTETVIFSGNIDRIVFSPYWYVPASIIKNELKLKMAEDKNYLADHNME---------- 403

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                WN         RQ PG  N++   K  F + N+ Y+HDTP   LF+   R  + G
Sbjct: 404 -----WNGGS-----VRQKPGPNNSLGLVKFMFPNPNDIYLHDTPAKSLFDFEKRTFSHG 453

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+ VR+   L + +LKD P W    I + +   K T   L  ++P++  Y +AW   D  
Sbjct: 454 CINVRDAKKLALEILKDNPDWPVDKINDAMSGEKETTCMLKNKIPIYIGYFTAWVTDDGE 513

Query: 403 IQFRDDIYGLDNVHVGII 420
           I F  D+Y  D     ++
Sbjct: 514 IGFYPDVYDRDKQLDKLL 531


>gi|254230281|ref|ZP_04923670.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
 gi|151937178|gb|EDN56047.1| putative peptidoglycan binding domain protein [Vibrio sp. Ex25]
          Length = 345

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 95/370 (25%), Positives = 163/370 (44%), Gaps = 34/370 (9%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS 108
           ++ F +  + +        PI  +  +A                           +G+  
Sbjct: 2   DEAFYSAYSSLSEHAKYQYPIYEQTGLA--------------------------RVGDQL 35

Query: 109 VSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +   L ER+ + G D+      +  +D  +E AVK FQ  HGL   G++  +T+  +N 
Sbjct: 36  ENKPLLIERMEVVGVDVSYLDITTQQYDEELELAVKEFQRIHGLKEDGVIGPNTIRWINF 95

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               R+  L +N  R +   + +     V VN+P   +    +G+    S V+VGR  R+
Sbjct: 96  SPQERLHLLALNSERSRIWSKDR--DNVVFVNVPGYEVTYWHDGQPLFESKVVVGRASRK 153

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEE 285
           TPI+   ++ ++ NP W +P +I+ KD++  ++++P YL ++NI +I      + +    
Sbjct: 154 TPIMSGTLDSVILNPTWNVPWTIMVKDIIPKVKRNPMYLINHNIQIIRSWTSNEIIDPTT 213

Query: 286 VDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           ++W +  P    +  RQ  G  NA+   K    +    Y+HDTP   LF    R  +SGC
Sbjct: 214 INWATVNPRTFPYRMRQASGLHNALGLYKFNMPNPQAIYLHDTPSKNLFERDRRAFSSGC 273

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VRV +   L   L K      R   +     R  T V L   + VH +Y +AW  ++  +
Sbjct: 274 VRVEHADQLAELLFKTQGLEERLAKKRESTRRSNTSVPLGERIQVHIIYQTAWL-EEGTL 332

Query: 404 QFRDDIYGLD 413
            +RDDIY  D
Sbjct: 333 YYRDDIYKYD 342


>gi|307825667|ref|ZP_07655884.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733244|gb|EFO04104.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 574

 Score =  337 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 115/423 (27%), Positives = 192/423 (45%), Gaps = 29/423 (6%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRF----DNFLARVDMGIDSDIPIISKETIAQTEK 80
            L    ++   ++  +      +++             +     S  P   +    + ++
Sbjct: 140 DLHYGRVNPQGINFNLKLREKKLIDLPLLIKDSLAQNNLAQLPLSLEPQFKQ--YQKLKQ 197

Query: 81  AIAFYQDILSRGGWPELP-----IRPLHLGNSSVSVQRLRERLIISGDLDP-----SKGL 130
           A+A Y+ + +      +P        LH G S   +  LR  L   GDL       S   
Sbjct: 198 ALANYRQLAA----IAVPFKLDVKETLHPGESHPQIAELRRFLTTVGDLPDDKTVISAEK 253

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  +   + + VK FQ RHGL   G +   ++ A+NVP++ R+ QL++ + R++ L E  
Sbjct: 254 SSLYTDAIVTGVKAFQKRHGLTADGNIGKGSVAALNVPLNYRVTQLELAMERLRWLPELN 313

Query: 191 MGLRYVLVNIPAASLEAVE----NGKVGLRSTVIVGRVD-RQTPILHSRINRIMFNPYWV 245
           +G   ++VNIPA  L A +         +   V+VG     QTP+L + ++ I F PYW 
Sbjct: 314 VGAS-IIVNIPAFQLWAFDSIDQPDANIVNMRVVVGNALKTQTPVLMAEMHFIDFMPYWN 372

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD---WNSPEPPNFIFRQDP 302
           +P SII+ +++  L Q+  YL   N+ M+           ++    N  +      RQ P
Sbjct: 373 VPYSIIKNEILPKLIQNSNYLDKENMEMVSVFRDGEKPTALNQETMNLLKEGKLRIRQRP 432

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  NA+   K  F ++++ Y+HDTP   LF+   R  + GCVRV N   L  + LK+   
Sbjct: 433 GGKNALGKVKFIFPNKDDVYLHDTPANALFSKSRRDFSHGCVRVANPQKLAEFALKNQDN 492

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W+   I+  + T K   V L   +PV F Y +A+  +   ++F  DIYG D V +G +  
Sbjct: 493 WNAETIQLAMNTPKMQRVILKKPIPVLFFYTTAFFDQYDNLEFYPDIYGHDAVLLGALSK 552

Query: 423 PED 425
           P+D
Sbjct: 553 PDD 555


>gi|283856545|ref|YP_163499.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|283775552|gb|AAV90388.2| ErfK/YbiS/YcfS/YnhG family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 483

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 23/407 (5%)

Query: 20  LPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L    ++    + AS  D    +  + Y    + +       +     +  P  S    A
Sbjct: 84  LDYARAIHSGRLSASDFDKNWGMKPDPYDPWPDFKNAVNNNTLGDWAANLPPPYS--GYA 141

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S  FD
Sbjct: 142 GLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGSSHFD 200

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R + L  + +    
Sbjct: 201 AALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWRWLP-RNLPENR 259

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K++
Sbjct: 260 IQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKEL 319

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
               +  P YL+     +I E G+                   +Q PG  N++   K +F
Sbjct: 320 WPKEKAHPGYLQAAGFKIIGESGQ---------------GQRLQQKPGPRNSLGQLKFDF 364

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +   
Sbjct: 365 PNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDKN 424

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +T  V+L   V V   Y +A+   ++ + FR D Y  D +    I  
Sbjct: 425 ETERVRLKQPVAVFLFYWTAFGNGENALSFRSDPYKWDELLAQKIEA 471


>gi|170726506|ref|YP_001760532.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169811853|gb|ACA86437.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 461

 Score =  335 bits (860), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 177/375 (47%), Gaps = 6/375 (1%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPL 102
               +  R +     +   + S  P  S          I +   +     W P +    L
Sbjct: 82  RSVKIQSRGEGGSDDLYRNVISLEPSSSD--YLPISNRIRYLLWVEQTESWQPLVLDIWL 139

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+ + +V+ +  RL   GDL+     +    + +   V  FQ RHGL   G++   TL
Sbjct: 140 KEGDINPAVKVISRRLNWLGDLNFLDPDNSVMTSELVRGVLNFQRRHGLKQDGVIGPETL 199

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +N+    R   L  N +     L   +G R++LVNIPA  +  V+ G+V L S VIVG
Sbjct: 200 RWINLTPKKRAALLAENFISKSSYLS-TIGPRFLLVNIPAFEMVLVDKGQVQLESRVIVG 258

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  RQTP L S I+ ++ NP W +PR+++++D++  +R+D  Y+ ++N  + +  G E+ 
Sbjct: 259 KPYRQTPRLSSYISNMVLNPSWRVPRTLLRRDLLPKVRKDGAYISEHNFDVFNSAGDEIV 318

Query: 283 VEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
               +W +     F +R  Q PGK N +   K  F +  N Y+HDT +  LF    R  +
Sbjct: 319 KSPEEWQTLAGGRFPYRLVQKPGKDNTLGRYKFYFKNEYNVYLHDTYDKALFEESNRALS 378

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           SGC+RV  +  L  WL  +  +  +  ++   +  KT        + VH VY +AW  + 
Sbjct: 379 SGCIRVEKVESLANWLASNLVSDKQTWVDLQTERDKTQWFAFDNFLAVHLVYWTAWVDES 438

Query: 401 SIIQFRDDIYGLDNV 415
            + QFR+DIY  +++
Sbjct: 439 GLAQFRNDIYHQNSM 453


>gi|94501826|ref|ZP_01308338.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
 gi|94426047|gb|EAT11043.1| hypothetical protein RED65_14387 [Oceanobacter sp. RED65]
          Length = 628

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 105/396 (26%), Positives = 177/396 (44%), Gaps = 37/396 (9%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQ 112
               ++   +   +P        +  + +  YQDI   G W P     PL  G+    + 
Sbjct: 226 LEQGKLHELVKQLVPSHP--GYERLGQELERYQDIAESGLWYPLEIENPLKAGDHHAQIP 283

Query: 113 RLRERLIISGDLDPSK-------------------------GLSVAF--DAYVESAVKLF 145
           RL+  L   GD   S                               +  D     A+K +
Sbjct: 284 RLKWMLNAYGDYQKSAMDWLVSQTPNSELDPLALERQYRKQPEHQVYRIDENTVRALKHY 343

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q R+GL P+G +D  TL  +N P     +++ +N+ R + L ++ +G  Y+LVN+    L
Sbjct: 344 QKRNGLLPTGRLDQQTLAQLNEPPYFIAQRIALNMKRWRYLPKE-LGEDYILVNMADFRL 402

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                GK  L   VI+G+   +TP+L   I+ ++  P W +P  I  +D++   ++DP Y
Sbjct: 403 NYFAKGKRQLNMKVIIGKEHLRTPVLAETISSVILAPEWNVPHRIAIRDIIPQAKRDPDY 462

Query: 266 LKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNN 320
           L+ +N  + +      KEV +E +D+N  +     +   Q PG  N++ + K  F +  +
Sbjct: 463 LRKHNFKVYEGWSMPPKEVPLENLDFNGFQSRTNTYRLVQAPGDDNSLGNVKFVFPNDKS 522

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            Y+HDT    LF   +R  +SGC+RV   + L   LL     W    I  V++ R T PV
Sbjct: 523 IYLHDTNHKELFARDMRALSSGCIRVEQPMALAKALLGRQ-NWDEQLISNVIERRYTRPV 581

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           +L   VPV+ +Y + W  ++  +Q R D+Y  D ++
Sbjct: 582 RLKDPVPVYLMYWTTWVNEEGTLQVRRDVYNRDQIN 617


>gi|119899290|ref|YP_934503.1| hypothetical protein azo3000 [Azoarcus sp. BH72]
 gi|119671703|emb|CAL95616.1| putative periplasmic protein [Azoarcus sp. BH72]
          Length = 543

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 112/411 (27%), Positives = 182/411 (44%), Gaps = 26/411 (6%)

Query: 29  KPIHASVLD-EIINESYHSIVNDRFDN--------FLARVDMGIDSDIPIISKETIAQTE 79
             +H   +D   ++ +Y     + FD            RV+    + +P +         
Sbjct: 114 GDVHRGRIDPRSVHAAYAGPAPEAFDADAYLRAALAEDRVEEAARAAVPPLP--LYGALR 171

Query: 80  KAIAFYQDILSRGG----W----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            A+A Y+ + +       W    P  P R L  G     +  L  RL + GDL     L 
Sbjct: 172 TALAHYRTLAAGADAQAAWSLPLPLPPRRKLEPGQPYAGLALLARRLTLLGDLVADVPLP 231

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             ++  +  AVK FQ+RHGL   G+V   TL  + V    R+RQ+++ + R++     + 
Sbjct: 232 PRYEGALVDAVKRFQLRHGLAADGVVGRGTLAELEVAPAARVRQIELTMERLRWTPLLQ- 290

Query: 192 GLRYVLVNIPAASLEAVE--NG--KVGLRSTVIVGRV-DRQTPILHSRINRIMFNPYWVI 246
             R ++VN+P   L A E  +G  +V  R  VIVG+  D +TP+    +  I F+PYW +
Sbjct: 291 APRMIVVNVPEFMLRAYEVRDGRIEVAARMKVIVGKALDTRTPLFAEDMRFIEFSPYWNV 350

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV-EEVDWNSPEPPNFIFRQDPGKI 305
           P SI + +++  LR++P Y        +   G           ++        RQ PG  
Sbjct: 351 PPSIARAELVPRLRREPGYWNAQGFEFVAGDGTANPTLSTAGLDAVLRGTLRIRQRPGPH 410

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   K  F + +N Y+H TP P LF    R  + GC+RV   ++L  ++L+D P W  
Sbjct: 411 NALGDIKFVFPNNDNIYLHHTPTPQLFARDRRDFSHGCIRVEAPVELARFVLRDQPEWDE 470

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
             I E +    +  +++AT +PV   Y +A    +    F  DIYG D + 
Sbjct: 471 ARIREAMSAGSSKTIRVATPLPVLIAYGTAMVDAEGHAHFFRDIYGHDQLL 521


>gi|312887097|ref|ZP_07746701.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311300409|gb|EFQ77474.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 550

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 108/411 (26%), Positives = 189/411 (45%), Gaps = 25/411 (6%)

Query: 12  YCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS 71
             +F +  L            AS              +   D+ L        ++ P+  
Sbjct: 153 SQYFAFSRLAW----QGMGTSASDSSRWYVPRKKIAYDQYLDSLLKAPAKSFSANEPVYR 208

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +         +  Y+ + +   W  +  +   L  G++S +++ ++ RL+   D      
Sbjct: 209 Q--YELLRHFLKIYRSLDAADEWKPVDTKSVNLKPGDTSAAIKEIKIRLLRLQDFQGD-T 265

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            + ++DA +  AVK FQ R+GLD SG ++  T+ AMNVP+ +RI+Q+ VN+ R + L   
Sbjct: 266 FNESYDADLIIAVKQFQYRNGLDTSGRLNKETIMAMNVPLKIRIKQILVNMERARWLPV- 324

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +   ++ VNIP  +L       +     V+VG+   QT I +  I  ++F+PYW IP+S
Sbjct: 325 SLNADFLAVNIPEFTLHVYHADSLLWSCPVVVGQKVHQTSIFYGEIKYVVFSPYWNIPQS 384

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I++ +++  L++ P YL  + + +                  +    I RQ PG  N++ 
Sbjct: 385 IVRAEVVPGLKKSPDYLLRHQMEI---------------TGYKEGLPIVRQKPGPENSLG 429

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F +  N Y+HDTP+  LF    R  + GC+R+     L  +LLK+   WS   I+
Sbjct: 430 LVKFLFPNSYNIYLHDTPKKSLFGETTRDFSHGCIRIMEPAKLAAFLLKNHNKWSGIKIK 489

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             + + K   V L  +VPV   Y +A++ +  ++ FR DIY LD+    +I
Sbjct: 490 RAMNSGKEQYVSLEHKVPVFITYFTAFTDRRGLLNFRKDIYSLDDRLARMI 540


>gi|332187614|ref|ZP_08389350.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332012362|gb|EGI54431.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 510

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 112/397 (28%), Positives = 173/397 (43%), Gaps = 30/397 (7%)

Query: 27  VEKPIHASVLD------EIINESYHSIVNDRFDNF--LARVDMGIDSDIPIISKETIAQT 78
               +H   LD      +             F +     R+   I +  P  +       
Sbjct: 117 YAHAVHVGRLDTADFSKDWGIRPQSYDPLPGFADAVRQDRIADWIAALPPPYA--GYDTL 174

Query: 79  EKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
              +A Y+ +   GGW  LP    +  G+S   V +LR+RL +             FD  
Sbjct: 175 VTGLARYRAMAEAGGWTALPANASIPYGSSGPLVAQLRKRLAMED--PAVSQTGATFDEP 232

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           + +AV+  Q R+GL+P G V S T+ A+NVPV  RIRQ+  N+ R + L +Q +  + V 
Sbjct: 233 LLAAVRRAQRRYGLNPVGTVGSQTIAALNVPVSQRIRQIMANMERWRWLPQQ-LEAKRVQ 291

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI AA L   E     L    + GR   +TP+L S I+ ++ NP W +P SI  K++  
Sbjct: 292 VNIAAAVLTVFEGDNPVLSMKAVTGRPGNETPMLVSSIHSVVLNPPWNVPSSIANKELWP 351

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R +P YLK N   +ID                        Q   + +A+   K +F +
Sbjct: 352 KERANPGYLKRNGFRVID----------------NGDGSKRLQQSSEKSALGRFKFDFPN 395

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
               Y+HDTP    F+   R  + GCVR+    +L   +LK TP W    ++  + + KT
Sbjct: 396 DFAVYLHDTPAQSGFSKFDRLASHGCVRLEKPAELAGLVLKTTPEWQPAAVDATLASGKT 455

Query: 378 TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
               +   V V+ +Y +A++  D  + FR+D YG D 
Sbjct: 456 VRASMDEPVAVYLLYWTAFANSDGQVSFREDPYGWDA 492


>gi|83859233|ref|ZP_00952754.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852680|gb|EAP90533.1| hypothetical protein OA2633_12550 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 506

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 115/412 (27%), Positives = 174/412 (42%), Gaps = 23/412 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM------GIDSDIPIIS 71
           +       L    +    LD    +    I +       A+          +++  P   
Sbjct: 79  VWFDYAEDLAFGVVDPRALDS---DWTAPIHDVDLLTAYAQAREGQGIYESLEALAPAHP 135

Query: 72  KETIAQTEKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
                     +     ++     P L  P   L  G+    V  LR RL   G L     
Sbjct: 136 D--YQALRSELVRRLTLVEA---PILVPPGEALSRGDQGPRVDALRARLAQLGLLAGPVA 190

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               FD  +ESAV  FQ RH L   G    STL  +N     RI Q++ NL R + L  +
Sbjct: 191 AGAPFDGRLESAVMRFQTRHNLAADGEAGPSTLSELNAGDARRINQIRANLERWRWLPAE 250

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G R++ VNI    LEA ENG V      ++G+   +TP+    ++ I  NPYW+ P S
Sbjct: 251 -LGERHIRVNIADYRLEAWENGVVARTHETMIGQRYSRTPVFSEDMSIIEINPYWLTP-S 308

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            + +  +   R +P Y       ++D + G  V   + DW S     +   Q PG  NAM
Sbjct: 309 GLGQRWLRTFRTNPAYALSQGYRLVDLDTGARVDPYQADWAS---RRYRVIQAPGPNNAM 365

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F + +N Y+HDTP   LF N  R ++SGCVRV +  +L +W+L     WS   +
Sbjct: 366 GRVKFLFPNVHNVYIHDTPHRELFANAQRDDSSGCVRVEHPEELAIWILS-AEGWSAQAV 424

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            E   +  T  ++L   VPVH +Y +A S +   ++F  D+Y  D   +  +
Sbjct: 425 REAFDSGDTRRIRLRHVVPVHILYFTAVSDEMGRVRFIHDVYDRDERLIAAL 476


>gi|238898896|ref|YP_002924578.1| hypothetical protein HDEF_1835 [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466656|gb|ACQ68430.1| conserved hypothetical protein, YkuD and peptidoglycan binding
           domains [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 530

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 106/361 (29%), Positives = 173/361 (47%), Gaps = 15/361 (4%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLII 120
            ++S  P   +    + +  +     +     WP+L  R  L  G SS  +  +++ L  
Sbjct: 174 YVNSLAPQHPQ--YRKMQTELLKL--LSDNSPWPKLTERVYLREGYSSKDISNVKKILYR 229

Query: 121 SG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            G  ++  +   S  +   +  A+K FQ   GL   G++   T   +NV   +  R L +
Sbjct: 230 LGIGNMSLTDVDSQVYSHDLVMAIKQFQKNRGLPADGIIGIRTRNWLNVSPKILARLLAL 289

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           N+ R++           +LVNIP  SL   E GK+ L S VIVGR DR+TP++ S IN+I
Sbjct: 290 NMQRLRFTPADI--QTGILVNIPDYSLNYYEEGKIRLFSKVIVGRPDRKTPVMQSAINQI 347

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEP 293
           + NP W +P S+ ++D++  + ++  YL+++N  ++    +    +  E +DW   S E 
Sbjct: 348 VINPDWNVPHSLAREDILPQVIKNIDYLQEHNYRILSSWSQNAEVIDPESIDWENISIEN 407

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +  RQ  G  N +   K    +R + ++HDTP   +F    R  +SGCVRV+   +L 
Sbjct: 408 FPYYLRQTLGPNNPLGHYKFNMPNRYSIFLHDTPNKAMFQRYRRAGSSGCVRVQKASELA 467

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LLK T   +   I   +K  K+T       +PV   Y++AW  +D   QFR DIY  D
Sbjct: 468 RLLLKKT-GLTDADILNFLKENKSTYRNTRKRIPVWLYYLTAWVSEDGATQFRTDIYHYD 526

Query: 414 N 414
            
Sbjct: 527 Q 527


>gi|70729780|ref|YP_259519.1| hypothetical protein PFL_2412 [Pseudomonas fluorescens Pf-5]
 gi|68344079|gb|AAY91685.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 523

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 117/401 (29%), Positives = 180/401 (44%), Gaps = 17/401 (4%)

Query: 30  PIHASVLDEIINES---YHSIVNDRFDNFLARVDMGIDSDIPIISKE-----TIAQTEKA 81
            +H   L +   E       + +DR    LA    GI        +            +A
Sbjct: 126 DLHYGRLAQSRFEPMWRAQPLPDDRQSALLAIAVPGIAHIATAFEQARPSLAQYRNLRQA 185

Query: 82  IAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVE 139
            A  +       W  +   PL         V  L  RL   G L         A+   + 
Sbjct: 186 YAHERQQPL-PQWQAVAGGPLLRPDMQDKRVPELALRLYHGGYLQSPVVNPDNAYSGELV 244

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           SAVK FQ+ H L   G+V + TL+ MN+    R  QL++NL R++ L  Q      VLVN
Sbjct: 245 SAVKNFQLGHSLQADGVVGAGTLKEMNISPAERREQLRINLERLRWL-AQDYEPNLVLVN 303

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           + AA L   ++  V  ++   VGR +RQTP+L S++ R+  NP W +P +I+++D +  +
Sbjct: 304 VAAAQLTFYQHDAVVWQTRTQVGRAERQTPLLKSQVTRLTLNPTWTVPPTILKEDKLPEI 363

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R+D  +L   N+ ++D  G+ +  E++DW+   P N + RQ  G  N +    I F +  
Sbjct: 364 RRDQGFLNRQNLQVLDANGQPLAAEDIDWD--RPGNILLRQGAGPRNPLGRIAIRFPNPF 421

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+HDTP   LF+   R  +SGCVRV   + L  WLL       R    E++ T  T  
Sbjct: 422 SVYLHDTPSQALFSKGPRAFSSGCVRVEQALQLRDWLLSPAE---RLRTNELLATGLTHE 478

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +LA  VP+   Y +  +     + +  DIYG D V    +
Sbjct: 479 FRLAKPVPILLSYWTVQADSHGQLLYAPDIYGHDQVLSTAL 519


>gi|15888928|ref|NP_354609.1| hypothetical protein Atu1615 [Agrobacterium tumefaciens str. C58]
 gi|15156702|gb|AAK87394.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 642

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 105/410 (25%), Positives = 171/410 (41%), Gaps = 23/410 (5%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L          +  + L    +   ++ +     +       V   + S  P  S    
Sbjct: 225 VLAYVQDTTRGRVDPNRLSGYHDFKRKTVNLAPVLKLAGLSPDVAAYLRSREP--SSAEY 282

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVS----VQRLRERLIISGDLDPSKGL 130
              +  +A  +          +P    L  GNSS      V+ +  R   +   + +  +
Sbjct: 283 LALKAELARLRGEGDTAHTVRVPADLVLKPGNSSADMASVVKAIEHRASPAFKAEHAAIM 342

Query: 131 SVA-----FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIK 184
           S       +   +   VK FQ  +GL P G++  +T+ AM     D +I ++QV + +++
Sbjct: 343 SAYQQTPDYTPDLVDLVKAFQSENGLKPDGVIGRATVRAMVGESNDAKIAKVQVAMEQVR 402

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L    +G RYV +N PA       +G       V+VG    QT      I  + FNPYW
Sbjct: 403 WLPA-DLGQRYVFINQPAFMAYYHNDGVEQFGMKVVVGSKANQTYFFQDEIQTVEFNPYW 461

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P+SII  +M+  LR+DP YL      +    G+ V    V+W          RQ P  
Sbjct: 462 GVPQSIIVNEMLPKLRRDPSYLDRLGYEVQVG-GRAVSSSSVNWYGSTNA-VSVRQPPSS 519

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   KI F + +  YMHDTP    FN  +R  + GC+R+ +   +   +L      S
Sbjct: 520 DNALGDLKILFPNAHAIYMHDTPAKSFFNRDMRALSHGCIRLVDPRRMAAAVL----GSS 575

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              + E +   K   V++  +VPV+  Y +AW  KD  +QF DD+Y  D+
Sbjct: 576 VDKVNEQIAAGKNRAVQVPEKVPVYVAYFTAWPDKDGKVQFFDDVYDRDS 625


>gi|116620897|ref|YP_823053.1| peptidoglycan binding domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116224059|gb|ABJ82768.1| Peptidoglycan-binding domain 1 protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 401

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 12/371 (3%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIIS 121
                P +  +   +T +A+  Y+ + +      +P    +  G++      L  RL + 
Sbjct: 29  ARLRNPSVPPDEYERTLRALDQYRALAAAPDEVFVPVTGTVKPGDAYSDAPLLIRRLSLL 88

Query: 122 GDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           GDL        S  ++  +  AVK FQ RHGL P G ++++TL  +NVP+  R+RQL+++
Sbjct: 89  GDLAADAVPSDSDVYEGELVEAVKRFQSRHGLKPDGRIEATTLGQLNVPLCARVRQLELS 148

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAV----ENGKVGLRSTVIVGR-VDRQTPILHSR 234
             R +           +++N+P   L A           L   V+VG+  D ++PIL S+
Sbjct: 149 AERWR-RHPYDPTRPAIVLNLPEFRLRAYGGTDAGSDPELEMKVVVGKAPDHKSPILLSQ 207

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF---VEEVDWNSP 291
           +  ++F PYW +P SI + +++ L+R+DP ++  N   ++  +G+      + E      
Sbjct: 208 LQAVIFRPYWKVPVSIQRNELLPLIRKDPAWVSANRFELVTPQGEVAEEEKLSEETLEDI 267

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                  RQ PG  N++   K  F +    YMHDT    LF    R  + GC+RV    D
Sbjct: 268 STGKLQLRQKPGPKNSLGLVKFLFPNEYGVYMHDTAAHSLFARERRDLSHGCIRVEKPED 327

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L  W+L++   W R  IEE ++  +   VK+   + +  +Y +A   K+  + F  DIYG
Sbjct: 328 LAAWVLREQSDWPRERIEEAMQGTEPVSVKVKRPIQIVMMYSTASVMKNGEVHFFRDIYG 387

Query: 412 LDNVHVGIIPL 422
            D V    +  
Sbjct: 388 EDAVLEKELAA 398


>gi|4378168|gb|AAD19413.1| unknown [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 473

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 110/407 (27%), Positives = 186/407 (45%), Gaps = 23/407 (5%)

Query: 20  LPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           L    ++    + AS  D    +  E Y    + +       +     +  P  S    A
Sbjct: 74  LDYARAIHSGRLSASDFDKNWGMKPEPYDPWPDFKNAVNNNTLGDWAANLPPPYS--GYA 131

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             +  + +Y+ I  +GGWP +P    L +G+ +  V+ LR R+ I  D +     S  FD
Sbjct: 132 GLKNGLIYYRAIAEKGGWPVVPTGADLTVGSDNPRVKTLRRRIAIE-DKELPDNGSSHFD 190

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A +++AVK  Q R+GL+P+G+V   TL+A+N PV  RI Q+  N+ R + L  + +    
Sbjct: 191 AALKAAVKRAQQRYGLNPTGVVSGQTLQALNQPVKSRIHQIMANMERWRWLP-RNLPENR 249

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VN+ AA L   E  +  +    + GR   +TP+L S I  ++ NP W +P SI +K++
Sbjct: 250 IQVNVAAAVLTLFEKNQPVMSMKSVTGRPGNETPMLRSTIYSLVINPPWNVPDSIAKKEL 309

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
               +  P YL+     +I E G+                   +Q PG  N++   K +F
Sbjct: 310 WPKEKAHPGYLQAAGFKIIGESGQ---------------GQRLQQKPGPRNSLGQLKFDF 354

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP    F+   R E+ GC+R+ + + L   LL   P W+   +   +   
Sbjct: 355 PNSYSVYLHDTPGRGAFSRYGRLESHGCIRLEHPVALGERLLAADPAWTGDRLRSEIDKN 414

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +T  V+L   V V   Y +A+   ++ + FR + Y  D +    I  
Sbjct: 415 ETERVRLKQPVAVFLFYWTAFGNGENALSFRSEPYKWDELLAQKIEA 461


>gi|77459598|ref|YP_349105.1| hypothetical protein Pfl01_3376 [Pseudomonas fluorescens Pf0-1]
 gi|77383601|gb|ABA75114.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 537

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 106/406 (26%), Positives = 177/406 (43%), Gaps = 23/406 (5%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS--KETIAQTEKAIAFYQD 87
            +H   L   +   +  + +   +    R    +   +P +             +A YQ+
Sbjct: 140 DLHYGRL---LQSHFEPLWHSD-ETPRDRQAELLAIAVPGVHNVPAAFDLARPQLAQYQN 195

Query: 88  IL---------SRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDA 136
           +          +   W  +   PL         V  L  RL   G L   +     A+  
Sbjct: 196 LRHLYAAQRLKALPQWTSVGNGPLLRPDMEDKRVPELARRLYSEGYLNSVAGTPDNAYHG 255

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +  AVK FQ  H L   G+V   T+  +N+    R  QL+VNL R +  + Q M    +
Sbjct: 256 VLVEAVKSFQANHSLQADGVVGPGTIAELNISPLTRREQLRVNLERFRW-MAQDMEPDGL 314

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           LVN+ AA L   + G    ++   VGR +RQTP+L SR+ R+  NP W +P +I ++D +
Sbjct: 315 LVNVAAAELTLYQGGLPVWQTRTQVGRAERQTPLLKSRVTRLTLNPTWTVPPTIWKEDKL 374

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
             +R+D  +L   N+ ++D  G+ +   ++DW+   P N + RQD G  N +    I F 
Sbjct: 375 PEIRKDQTFLSRQNLQVLDANGQPLAAADIDWD--NPGNILLRQDAGPRNPLGQMVIRFP 432

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +  + Y+HDTP   LF+   R  +SGCVRV + + L   LL       +   + ++ T  
Sbjct: 433 NPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHPMKLRDLLLSPAE---KARTDTLLATGV 489

Query: 377 TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           T   +L+  VP+   Y +A       + +  DIY  D+  +  +  
Sbjct: 490 THEFRLSNPVPILMTYWTAQVDGQGRVLYAPDIYSRDSALLAGLDR 535


>gi|119774749|ref|YP_927489.1| peptidoglycan binding domain-containing protein [Shewanella
           amazonensis SB2B]
 gi|119767249|gb|ABL99819.1| peptidoglycan-binding domain 1 [Shewanella amazonensis SB2B]
          Length = 472

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 114/401 (28%), Positives = 187/401 (46%), Gaps = 10/401 (2%)

Query: 17  YLILPMGLSLVEKPIHASVLDE--IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           YL L      +        +D+   +  +    V              ++S +  +    
Sbjct: 65  YLKLKNAWHQLGVHSSPGDMDQSGKMGANRSETVE---SAHHQNATQDLNSRLIALEPND 121

Query: 75  -IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-V 132
               T   +     +  +   P +    L  G+S   V  + +RL + GD++   G +  
Sbjct: 122 RFLNTMNRLRHLLWLAEQPWQPIVLNGLLRPGDSHTEVVAIAKRLWLLGDMETEPGYALS 181

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  V   VK FQ RHGL    ++   TL  +N+  D R  +L  + + ++    Q + 
Sbjct: 182 RYDDEVAQGVKAFQHRHGLKQDAVIGPKTLYWLNLAPDTRAARLARDYL-LQSRERQTLP 240

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             YVLVNIPA  LE V++G+  + S VIVG+  R+TP + S I+ ++ NP W +PR +++
Sbjct: 241 STYVLVNIPAFDLELVDDGEALMHSRVIVGKPSRKTPFIQSEISAVVVNPSWRVPRRLMR 300

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMAS 310
            D++  +R+D  YL      +   +G+EV   +  + S     F +   Q PG  NA+  
Sbjct: 301 LDVLPKVRKDGSYLSRKGFIVWSREGEEVKETDDFFQSAAAGKFPYLLEQRPGPDNALGR 360

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K+ F + +N Y+HDTP+  LF+  +R  +SGCVRV  I +L  WL        R   + 
Sbjct: 361 FKLHFANEDNVYLHDTPDKHLFDEPMRALSSGCVRVEKINELSAWLANGRLADPRRWQQT 420

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           +   + T    L   +PVHFVY ++W   +   QFR+DIYG
Sbjct: 421 LQTPQTTRWFTLKERLPVHFVYWTSWVDAEGKAQFREDIYG 461


>gi|238763355|ref|ZP_04624319.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
 gi|238698454|gb|EEP91207.1| Peptidoglycan-binding domain 1 protein [Yersinia kristensenii ATCC
           33638]
          Length = 624

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/291 (32%), Positives = 145/291 (49%), Gaps = 8/291 (2%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ L 
Sbjct: 319 TVTDNVYTPELMEAVKRFQQWHGLSEDGVIGARTREWLNVSPQTRATLLALNIQRLRILP 378

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P
Sbjct: 379 GRV--DNGIMVNIPNYSLNYYKNGSEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVP 436

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFRQDP 302
            S++++D++   R D  Y + +   ++       + V    +DW+   P    +  RQ P
Sbjct: 437 TSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRLRQAP 496

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   
Sbjct: 497 GASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-G 555

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 556 WNDARVSSTLKQGDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 606



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         + +   +     +I+N            + + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYNNVAYKMAMPPATILNRWQQAVHEGNTALYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +   A+     +  R  WP++   P L  G  S  +  LRE L  +G L P     
Sbjct: 199 EKMHLALKQM--LADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVASAP 253


>gi|238749753|ref|ZP_04611258.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
 gi|238712408|gb|EEQ04621.1| Peptidoglycan-binding domain 1 protein [Yersinia rohdei ATCC 43380]
          Length = 622

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 98/294 (33%), Positives = 149/294 (50%), Gaps = 8/294 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      +   +  AVK FQ+ HGL   G++ + T E +NV    R   L +N+ R++
Sbjct: 314 STATVTDNVYTPELVEAVKRFQLWHGLSDDGIIGARTREWLNVSPQTRATLLALNIQRLR 373

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG+  L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 374 ILPGRV--DNGIMVNIPNYSLNYYKNGEQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 431

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFR 299
            +P S+I++D++   R D  Y + +   ++         V  E +DW+   P    +  R
Sbjct: 432 NVPTSLIRQDILPKARYDSSYFQRHGYTVLSGWNNDAEVVDPEMIDWSMISPNHFPYRLR 491

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q+PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 492 QEPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQD 551

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              W+   +   +K   TT V +   VPV   Y++AW  +D   QFR DIY  D
Sbjct: 552 -VGWNDARVSSTLKQGSTTYVNIRERVPVQLYYLTAWVAEDGKPQFRTDIYNYD 604



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N              + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVHEGTTAPYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +  +A+     +  R  WP +   P L  G  S  +  LRE L  +G L P  G  
Sbjct: 199 EKMHQALKHM--LADRRPWPLMANGPSLRPGQLSDDIPALREILDRTGMLHPVDGAP 253


>gi|24373669|ref|NP_717712.1| hypothetical protein SO_2109 [Shewanella oneidensis MR-1]
 gi|24348019|gb|AAN55156.1|AE015652_5 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 502

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 111/413 (26%), Positives = 186/413 (45%), Gaps = 22/413 (5%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
           ++ ++     E+I      +    + +  A       S I              +     
Sbjct: 90  QRRLNPDEQAELIKMRQQLVRYWHYLDQQAECVEPCISKIFTQQSSYYHAVSLTLYQLMQ 149

Query: 88  ILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPS----------KGLSVAFDA 136
           +     W  L     L  G  S  +  +  RL+I G L                 + +  
Sbjct: 150 LEDLTSWELLTLEEKLSPGQQSPLISPIARRLLILGFLPNELRMEPSVGVEANNGMLYGD 209

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            + +A+KLFQ +HGL   G++   TL  +N     R + L  N++R      Q +  RY+
Sbjct: 210 ELVTAIKLFQQQHGLLADGVIGKQTLFWLNQSPRARAKLLARNVLRQSIFTAQ-LPARYL 268

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           LVNIPA  L+ +E+G+V LRS VIVG+  R TP+L S+I+ ++ NP W +PR+II++D++
Sbjct: 269 LVNIPAFELKLIEDGQVALRSKVIVGKASRPTPLLASQISSVVMNPEWRVPRTIIKRDIL 328

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIE 314
             +RQD  YL +    +    G++      +W +       +   Q PG  NA+   K  
Sbjct: 329 PHIRQDGHYLTEREFDVYAYDGQQAEHSADEWQALASSHFPYQLVQRPGPKNALGRYKFH 388

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW----LLKDTPTWSRYHIEE 370
           F +  + Y+H T EP LF    R  +SGC+RV  + +L +W    L+KD   W + H + 
Sbjct: 389 FDNSFSVYLHGTSEPSLFKRTNRALSSGCIRVEKVEELALWFKTHLVKDQRLWDKLHTD- 447

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
              T ++    L+ ++PV  VY + W      +Q+R+DIY  ++     +   
Sbjct: 448 ---TTQSQWFALSDKLPVFVVYWTVWLDDAGQVQYRNDIYQQESELSHAVSAT 497


>gi|22126641|ref|NP_670064.1| hypothetical protein y2763 [Yersinia pestis KIM 10]
 gi|45441013|ref|NP_992552.1| hypothetical protein YP_1186 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595771|ref|YP_069962.1| hypothetical protein YPTB1431 [Yersinia pseudotuberculosis IP
           32953]
 gi|108806698|ref|YP_650614.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|108812731|ref|YP_648498.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|149366664|ref|ZP_01888698.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|167470672|ref|ZP_02335376.1| hypothetical protein YpesF_22997 [Yersinia pestis FV-1]
 gi|170024879|ref|YP_001721384.1| hypothetical protein YPK_2654 [Yersinia pseudotuberculosis YPIII]
 gi|186894850|ref|YP_001871962.1| hypothetical protein YPTS_1533 [Yersinia pseudotuberculosis PB1/+]
 gi|218928555|ref|YP_002346430.1| hypothetical protein YPO1407 [Yersinia pestis CO92]
 gi|229841379|ref|ZP_04461538.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229843484|ref|ZP_04463630.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229895858|ref|ZP_04511028.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|229903136|ref|ZP_04518249.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|284988613|ref|YP_001401528.2| hypothetical protein YpsIP31758_2563 [Yersinia pseudotuberculosis
           IP 31758]
 gi|21959653|gb|AAM86315.1|AE013879_5 putative amidase [Yersinia pestis KIM 10]
 gi|45435872|gb|AAS61429.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51589053|emb|CAH20671.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776379|gb|ABG18898.1| hypothetical protein YPN_2570 [Yersinia pestis Nepal516]
 gi|108778611|gb|ABG12669.1| hypothetical protein YPA_0701 [Yersinia pestis Antiqua]
 gi|115347166|emb|CAL20059.1| putative exported protein [Yersinia pestis CO92]
 gi|149291038|gb|EDM41113.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|169751413|gb|ACA68931.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186697876|gb|ACC88505.1| Peptidoglycan-binding domain 1 protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678906|gb|EEO75009.1| predicted carboxypeptidase [Yersinia pestis Nepal516]
 gi|229689831|gb|EEO81892.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229697745|gb|EEO87792.1| predicted carboxypeptidase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700781|gb|EEO88810.1| predicted carboxypeptidase [Yersinia pestis Pestoides A]
 gi|320015731|gb|ADV99302.1| putative carboxypeptidase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 618

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 96/291 (32%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L   
Sbjct: 315 TDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGH 374

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 375 V--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 432

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNFIFRQDPGK 304
           ++++D++   R D  Y + N   ++         +    +DW+  SP    +  RQ PG 
Sbjct: 433 LVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGA 492

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 493 NNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 551

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 552 DARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +++N  +           + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEGSTASYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + ++A+     +  R  WP++P  P L  G  S  +  LRE L  +G L P+  +
Sbjct: 199 DKMQQALKLM--LADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPV 252


>gi|229591001|ref|YP_002873120.1| hypothetical protein PFLU3558 [Pseudomonas fluorescens SBW25]
 gi|229362867|emb|CAY49777.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 532

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 113/405 (27%), Positives = 183/405 (45%), Gaps = 27/405 (6%)

Query: 30  PIHASVLDEIINESYHSIVNDR-------------FDNFLARVDMGIDSDIPIISKETIA 76
            +H   L +     +  + + +                 L  +    D   P  S +   
Sbjct: 137 DLHYGRLQQ---SRFEPLWHSQPPTRDPNTEVLAFAAAGLQDMAQAFDQARP--SADLYR 191

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
               A A  +       W  +   PL   G     V  L  RLI  G L  +      + 
Sbjct: 192 SLRNAYATVRQQPL-PHWDPVGSGPLLRPGMEDPRVPELARRLISGGYL-ATASSGKQYH 249

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +  AVK FQ+ H L   G++ + T+  +N+   +R  QL++NL R + L  Q +    
Sbjct: 250 DELVKAVKAFQLSHSLQADGVIGAGTVAELNISPAIRREQLRINLERFRWL-AQDLEPEG 308

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VLVN+ AA L   ++G    ++ + VGR +RQTP+L SRI R+  NP W IP +I+++D 
Sbjct: 309 VLVNVAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDK 368

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +  +R +P+YL+  N+ ++D +G  +  E++DW    P N + RQ+ G  N +    + F
Sbjct: 369 LPAIRLNPEYLRQQNLQVLDAEGHPLAPEQIDW--ARPGNILLRQEAGPRNPLGKIVMRF 426

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP   LF    R  +SGCVRV   + L   L+       R   +E++ T 
Sbjct: 427 PNPYSVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAE---RARTDELLATG 483

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            T   +LAT VPV   Y +    +   + +  DIY  D V +  +
Sbjct: 484 VTHEFRLATPVPVLLGYWTVEVDRQGGLVYAPDIYARDLVLMKAM 528


>gi|238785818|ref|ZP_04629788.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
 gi|238713271|gb|EEQ05313.1| Peptidoglycan-binding domain 1 protein [Yersinia bercovieri ATCC
           43970]
          Length = 606

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 9/303 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   + +AVK FQ+ HGL   G++ + T E +NV    R   L +N+ R++ L  Q
Sbjct: 303 TDNVYTPELVAAVKRFQLWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRILPGQ 362

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 363 V--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 420

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQDPGK 304
           ++++D++   R D  Y + +   ++     E   V    +DW+   P    +  RQ PG 
Sbjct: 421 LVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQAPGA 480

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 481 SNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 539

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPLP 423
              +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D  V  G    P
Sbjct: 540 DARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYDKTVRSGAQISP 599

Query: 424 EDH 426
           +  
Sbjct: 600 QAE 602


>gi|83858763|ref|ZP_00952285.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853586|gb|EAP91438.1| hypothetical protein OA2633_04651 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 595

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 193/423 (45%), Gaps = 46/423 (10%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHL 104
            ++       A V       + +   E      KA   Y   +  GG+ ++P     L L
Sbjct: 174 PLDQMLPRAGAGVLDY--EQLSVTHPE-YEDLIKARRTYDGYIKSGGFTQVPEPEGLLEL 230

Query: 105 GNSSVSVQRLRERLIISGD--------------------------LDPSKGLS------- 131
           G+SS  V+ LR RL   G                            D +  +S       
Sbjct: 231 GDSSPVVETLRVRLREEGYRIERPRRPSLMAESQPPLTQVSFITAPDAAAPVSAADWRRE 290

Query: 132 -VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
             +F   +E+A++ FQ  +GL+  G++  +T+ A+NV  + ++ ++  NL R +      
Sbjct: 291 MQSFSPELEAALRDFQAHNGLEVDGVLGPATIAALNVSAEDKLARIDANLERWR-RASPD 349

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G RYV VNIPA +  AV +G   L    IVG   RQTP++  +I  I+ NP+W +P SI
Sbjct: 350 LGERYVEVNIPAYTARAVRDGDTELEMRSIVGLPARQTPLMSEQIEHIVANPHWYVPESI 409

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPE-PPNFIFRQDPGKINAM 308
           + +D ++ +R+D  YL+D    ++D   G+ +  E +DW++          QDPG  NA+
Sbjct: 410 LVRDKLSHIREDEAYLEDRGYKVVDRDTGEPLSAETIDWSADGIADQVRLIQDPGDNNAL 469

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH- 367
              KI F ++++ Y+H TP   LF    R  +SGC+R+ +   +  W+++     +    
Sbjct: 470 GELKIMFPNQHSVYLHGTPSRHLFERDQRAFSSGCIRLEDPQAMAAWVVEAVTDQNAEAM 529

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII---PLPE 424
           I + V + +   + L   +PVH VY +     D  + F  D+Y  D   + +I   PL  
Sbjct: 530 IAQAVASGENQHIALDAPLPVHVVYRTVEVEDDGDVIFHHDVYDRDPALIALIHNSPLTV 589

Query: 425 DHP 427
            +P
Sbjct: 590 RNP 592


>gi|288941918|ref|YP_003444158.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288897290|gb|ADC63126.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 557

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 112/423 (26%), Positives = 181/423 (42%), Gaps = 30/423 (7%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINES----YHSIVNDRF------DNFLARVDMGIDSDI 67
           L L   L           LD +  +        +  +R             +   +D   
Sbjct: 119 LQLSDALLRYAHHTRYGKLDPVAIDRKWNDRAPLPAERLIADMHGALEAGDLADFLDGRF 178

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP 126
                      ++A++ Y           LP    L LG+    V +LRERL + G  + 
Sbjct: 179 --QKPFWYQDLKRALSHYAGARQLKALEPLPGGSVLSLGSRGERVAQLRERLRLLGYSER 236

Query: 127 SKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL-RIRQLQVNLMRIK 184
           +       FDA +  AV+ FQ  HGL   G V   TL  +N PVD  RI ++++NL R++
Sbjct: 237 TPPDRPETFDAALSEAVRAFQRGHGLGADGAVGPQTLAVINDPVDESRIERIRINLERMR 296

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  + +   YV V++       V   ++   + VIVG+ D QTP+   R++ ++ NP W
Sbjct: 297 WLY-EDLPPDYVFVDVADYMAHLVRGREIAWSTRVIVGKEDSQTPMFRDRLDHLVLNPTW 355

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P SI         ++    + D  I +    G+ V       N+ +   +   Q PG 
Sbjct: 356 TMPVSI---------QKTFTKVSDKYILIDRRTGRRVS----GGNATDYKRYRVVQQPGP 402

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   K  F +R+  YMHDTP   LF    R  + GCVRV+N +     LL+++ +W 
Sbjct: 403 DNALGRVKFMFPNRHAVYMHDTPSKALFGRSARALSHGCVRVQNPMKFAELLLEES-SWD 461

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
           R  I+ V++  KT  V L+  +PV   Y++A +  +  ++ R D+YG D      +  P 
Sbjct: 462 RARIDSVLEGAKTRYVNLSEPLPVLLYYLTARADAEGNLRVRRDVYGRDPAVAEALDQPV 521

Query: 425 DHP 427
              
Sbjct: 522 QRA 524


>gi|238789300|ref|ZP_04633087.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
 gi|238722632|gb|EEQ14285.1| Peptidoglycan-binding domain 1 protein [Yersinia frederiksenii ATCC
           33641]
          Length = 625

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 96/294 (32%), Positives = 145/294 (49%), Gaps = 8/294 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      +   +  AVK FQ  HGL   G++   T E +NV    R   L +N+ R++
Sbjct: 317 ATAAVTDNVYTPELMEAVKRFQQWHGLSDDGVIGIRTREWLNVTPQTRATLLALNIQRLR 376

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 377 ILPGRV--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 434

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFR 299
            +P S+I++D++   R D  Y + +   ++         V    ++WN   P    +  R
Sbjct: 435 NVPTSLIRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMINWNMISPNNFPYRLR 494

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q+PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 495 QEPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQD 554

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D
Sbjct: 555 A-GWNDARVSSTLKQGNTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYD 607



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 7/127 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +IVN              + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPATIVNSWQQAVHEGTTAPYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            +  +A+     +  R  WP++   P L  G  S  +  LRE L  +G L P   +S   
Sbjct: 199 EKMHQALKQM--LADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVASVSAK- 255

Query: 135 DAYVESA 141
           D+ V  A
Sbjct: 256 DSEVIPA 262


>gi|238753519|ref|ZP_04614882.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
 gi|238708472|gb|EEQ00827.1| Peptidoglycan-binding domain 1 protein [Yersinia ruckeri ATCC
           29473]
          Length = 620

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 98/292 (33%), Positives = 146/292 (50%), Gaps = 8/292 (2%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +   + +AVK FQ   GL   G++   T E +NV   +R   L +N+ R++ L 
Sbjct: 315 SVTDNQYGEELVAAVKRFQQWQGLTDDGVIGPRTREWLNVSPQMRASLLALNIQRLRILP 374

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            Q      ++VNIP  SL    NG   L S VIVGR  R+TP++ S +N ++ NP W +P
Sbjct: 375 GQVT--TGIMVNIPNYSLSYYLNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVP 432

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNFIFRQDP 302
            S+I++D+M   R D  Y + +   ++   G     +    +DW+  SP    +  RQ+P
Sbjct: 433 ISLIRQDIMPKARNDASYFQRHGYTVLSGWGNDAEAINPSMIDWSLISPNHFPYRLRQEP 492

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   
Sbjct: 493 GASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLASMLLQDA-G 551

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           W+   +   +K   TT V +   +PV   Y++AW  +D   QFR DIY  D 
Sbjct: 552 WNNERVSSTLKQGNTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYDK 603



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N  +           + +  P   +   
Sbjct: 139 YLHFVSGVGTNGNVWLYSNVPYKMAMPPTAILNRWQQAVREGNTAAYMTALAPQHPQ--Y 196

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +  +A+     +     WP+      L  G  S  +  LRE L  SG L+ +    
Sbjct: 197 EKMHQALKSM--LADNRPWPQFTGAATLRPGQLSDDIPALREILDRSGLLNAAPAAP 251


>gi|320109078|ref|YP_004184668.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
 gi|319927599|gb|ADV84674.1| ErfK/YbiS/YcfS/YnhG family protein [Terriglobus saanensis SP1PR4]
          Length = 569

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 104/393 (26%), Positives = 176/393 (44%), Gaps = 22/393 (5%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW---PELPIRPLHLGNSSVSV 111
               VD  ++   P         T+ AI  Y  +L +      P +  + +  G      
Sbjct: 182 DSTDVDDALNDAEPQSP--EYRATKAAIVHYVGLLPQDHTSPVPMVTGKSIEPGKPWAGS 239

Query: 112 QRLRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           Q L  RL + GDLD  P    +  +D  +  A+K FQ RHG++  G +   T+ A+N P+
Sbjct: 240 QALSGRLALFGDLDNVPDTVSASTYDPQLTDALKKFQHRHGIEEDGKIGKDTVNALNTPL 299

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGR--VDR 226
            +RI QL   L R + L ++      ++VN+P  +L A  +G        V+VG+   + 
Sbjct: 300 GVRINQLTDTLERWRWLSDEYQNA-AIMVNLPEYTLRAFSDGHHEEFSMRVVVGQSVKEH 358

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP++   +  ++F P+W +P SI++ ++   +R    YL  +N   +D KG  V     
Sbjct: 359 RTPVITDHMKYLVFRPFWNVPPSIMKAEIAPHMRASSGYLASHNFETVDNKGNPVSASA- 417

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                     I R+ PG  N++   K  F +  N Y+H TP   LF+   R  + GCVR+
Sbjct: 418 --EQVARAGVIVREKPGPKNSLGLVKFLFPNTFNVYLHSTPATELFSRSKRDFSHGCVRL 475

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +    L  W+L+D   W+   I E ++  +    V L+  +P+   Y +A+  +D  + F
Sbjct: 476 QEPEKLAAWVLRDNSKWNDDSIHEAMENGQDNKTVLLSHPIPIVIFYATAYPGEDGDMHF 535

Query: 406 RDDIYGLDNVHVGII-------PLPEDHPIDSD 431
             DIYG D      +         P    +++D
Sbjct: 536 FTDIYGYDKELEDALHHGPPYPKAPIAEKVEAD 568


>gi|238792383|ref|ZP_04636017.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
 gi|238728309|gb|EEQ19829.1| Peptidoglycan-binding domain 1 protein [Yersinia intermedia ATCC
           29909]
          Length = 603

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 9/303 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ  HGL   G++   T E +NV    R   L +N+ R++ L  +
Sbjct: 300 TDNIYTPELVEAVKRFQQWHGLSDDGVIGVRTREWLNVSPQTRATLLALNIQRLRILPGR 359

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 360 V--DNGIMVNIPNYSLNYYKNGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 417

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQDPGK 304
           ++++D++   R D  Y + +   ++     E   V    +DW+   P    +  RQ PG 
Sbjct: 418 LVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLRQAPGA 477

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 478 SNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 536

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPLP 423
              +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D  V  G    P
Sbjct: 537 DARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYDKTVRSGAQISP 596

Query: 424 EDH 426
           +  
Sbjct: 597 QAE 599



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N  +           + S  P   +   
Sbjct: 119 YLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVREGTTAPYLASLAPQHPQ--Y 176

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            +  +A+     +  R  WP++   P L  G  S  +  LR+ L  +G L P      
Sbjct: 177 DKMHQALKLM--LADRQPWPQMSNGPSLRPGQLSDDIPALRKILDRTGMLHPVASQPA 232


>gi|149911942|ref|ZP_01900540.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
 gi|149804989|gb|EDM65018.1| hypothetical protein PE36_11037 [Moritella sp. PE36]
          Length = 409

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 114/355 (32%), Positives = 182/355 (51%), Gaps = 14/355 (3%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIIS 121
             SD P+  K     +    ++   +  +  W ++   R LH+G+SS +V  +  RLI+ 
Sbjct: 58  AVSDAPVSKKVLQFSSRA--SYLNWLSVQYSWEDIALSRLLHIGDSSAAVHEIHSRLILL 115

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           GD + S   S  +   + +AV+ FQ RHGL    ++   TL+ +N+    R   L+ N+ 
Sbjct: 116 GDSEESLRFSDVYTVEIAAAVRNFQRRHGLKADAIIGPDTLKWLNINPQRRAELLRQNME 175

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
             K      +  RY+LVNIPA  L   +NG++ LRS VIVG+  + TPIL S I+ ++ N
Sbjct: 176 E-KIHFMANLSDRYLLVNIPAYELLLSDNGEIALRSRVIVGKPKKPTPILTSEISSMVIN 234

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR-- 299
           P W +PRSI++ D++  ++ + ++    N  + + + + +     +W       F +R  
Sbjct: 235 PSWRVPRSILEDDLLPKVKMNGEFFSQRNFKVFNYQNQTIEKSPQEWQKLAYGQFPYRLE 294

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW---- 355
           Q PG  NA+   K  F +  + Y+HDT  P LF+N  R  +SGC+R+  + +L  W    
Sbjct: 295 QMPGTQNALGRYKFYFPNDFSVYLHDTSNPQLFSNANRALSSGCIRIEKVDELANWIANS 354

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           L+ + P WSR  I        T    L   +PVH VY +AW   + + QFRDDIY
Sbjct: 355 LVDNKPLWSRLKI----NRETTKWFPLNDVLPVHLVYWTAWIDDNGLSQFRDDIY 405


>gi|238757635|ref|ZP_04618819.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
 gi|238704140|gb|EEP96673.1| Peptidoglycan-binding domain 1 protein [Yersinia aldovae ATCC
           35236]
          Length = 603

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 108/406 (26%), Positives = 172/406 (42%), Gaps = 24/406 (5%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA---- 76
           P  L      +    L + I      +  +     +    +     IP+ +    A    
Sbjct: 193 PWPLMSNGPSLRPGQLSDDIPALREILARNGMLQPVVATPVKAPEVIPVDNPAVAAVNDD 252

Query: 77  ---QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
                EK+ A    ++       +   P+  G  S S   L         +  +      
Sbjct: 253 LSVDEEKSRAQAHSLVVSPSAAPVTDVPVAKGIVSPSTAPL---------ITTTPITDNV 303

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + +AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L       
Sbjct: 304 YTPELVAAVKRFQQWQGLTDDGVIGVRTREWLNVSPQTRATLLALNIQRLRILPGHV--D 361

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W +P S++++
Sbjct: 362 NGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQ 421

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSP--EPPNFIFRQDPGKINAM 308
           D++   R D  Y + +   ++       + V    +DW+        +  RQ PG  N++
Sbjct: 422 DIVPKARYDSGYFQRHGYTVLSGWSNDAQVVDPSMIDWSMISPNNFPYRLRQAPGSSNSL 481

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   +
Sbjct: 482 GRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNDARV 540

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +K   TT V +   +PV   Y++AW  +D   QFR DIY  D 
Sbjct: 541 SSTLKQGDTTYVNIRQRIPVQLYYLTAWVAEDGKPQFRTDIYNYDK 586


>gi|238795867|ref|ZP_04639380.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
 gi|238720330|gb|EEQ12133.1| Peptidoglycan-binding domain 1 protein [Yersinia mollaretii ATCC
           43969]
          Length = 574

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 100/308 (32%), Positives = 150/308 (48%), Gaps = 9/308 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      +   +  AVK FQ+ HGL   G++ + T E +N+    R   L +N+ R++
Sbjct: 266 STTTLTDNIYTPELVEAVKRFQLWHGLSDDGVIGARTREWLNISPQTRATLLALNIQRLR 325

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 326 ILPGKV--DNGIMVNIPNYSLNYYKNGTEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 383

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFR 299
            +P S++++D++   R D  Y + +   ++     E   V    +DW+   P    +  R
Sbjct: 384 NVPTSLVRQDIVPKARYDAGYFQRHGYTVLSGWSNEAEVVDPSMIDWSMISPNNFPYRLR 443

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 444 QAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQD 503

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVG 418
              W+   +   VK   TT V +   VPV   Y++AW   D   QFR DIY  D  V  G
Sbjct: 504 A-GWNDARVSSTVKQGDTTYVNIRQRVPVQLYYLTAWVADDGRPQFRTDIYNYDKTVRSG 562

Query: 419 IIPLPEDH 426
               P+  
Sbjct: 563 AQISPQAE 570


>gi|145599560|ref|YP_001163636.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
 gi|145211256|gb|ABP40663.1| hypothetical protein YPDSF_2288 [Yersinia pestis Pestoides F]
          Length = 618

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 96/291 (32%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L   
Sbjct: 315 TDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGH 374

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 375 V--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 432

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNFIFRQDPGK 304
           ++++D++   R D  Y + N   ++         +    +DW+  SP    +  RQ PG 
Sbjct: 433 LVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGA 492

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 493 NNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 551

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 552 DALVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 602



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +++N  +           + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEGSTASYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + ++A+     +  R  WP++P  P L  G  S  +  LRE L  +G L P+  +
Sbjct: 199 DKMQQALKLM--LADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPV 252


>gi|332162190|ref|YP_004298767.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318606244|emb|CBY27742.1| L,D-transpeptidase YcbB [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325666420|gb|ADZ43064.1| hypothetical protein YE105_C2568 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 623

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 8/293 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +      +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ 
Sbjct: 316 TATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRI 375

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W 
Sbjct: 376 LPGRV--DNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWN 433

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFRQ 300
           +P S++++D++   R D  Y + +   ++         V    +DW+   P    +  RQ
Sbjct: 434 VPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSMISPNNFPYRLRQ 493

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D 
Sbjct: 494 APGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA 553

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 554 -GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 605



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N              + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVHEGTTAPYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +  +A+     +  R  WP++   P L  G  S  +  LRE L  +G L P     
Sbjct: 199 EKMHQALKEM--LADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVVSAP 253


>gi|326424107|ref|NP_761768.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
 gi|319999488|gb|AAO11295.2| L,D-transpeptidase YcbB [Vibrio vulnificus CMCP6]
          Length = 535

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +  + +F N  +R+    D  +P+  +             
Sbjct: 166 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 212

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKL 144
                        +  L LG+       L +RL + G            +D  +E AVK 
Sbjct: 213 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 259

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 260 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 317

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 318 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 377

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +L   NI +++    +  V  + +DW     +   +  RQ  G  NA+   K    ++  
Sbjct: 378 FLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 437

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK              +    T +
Sbjct: 438 IFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLKTQ-GLEEELSNLATRQEANTMI 496

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 497 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 530


>gi|162419158|ref|YP_001606446.1| hypothetical protein YpAngola_A1973 [Yersinia pestis Angola]
 gi|166211229|ref|ZP_02237264.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167424284|ref|ZP_02316037.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|162351973|gb|ABX85921.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|166207000|gb|EDR51480.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167057133|gb|EDR66896.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
          Length = 596

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/291 (32%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L   
Sbjct: 293 TDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGH 352

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 353 V--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 410

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNFIFRQDPGK 304
           ++++D++   R D  Y + N   ++         +    +DW+  SP    +  RQ PG 
Sbjct: 411 LVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGA 470

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 471 NNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 529

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 530 DARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 580



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +++N  +           + S  P   +   
Sbjct: 119 YLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEGSTASYLASLAPQHPQ--Y 176

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + ++A+     +  R  WP++P  P L  G  S  +  LRE L  +G L P+  +
Sbjct: 177 DKMQQALKLM--LADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPV 230


>gi|123441868|ref|YP_001005851.1| hypothetical protein YE1557 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088829|emb|CAL11635.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 623

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 8/293 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +      +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ 
Sbjct: 316 TATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRI 375

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W 
Sbjct: 376 LPGRV--DNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWN 433

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFRQ 300
           +P S++++D++   R D  Y + +   ++         V    +DW+   P    +  RQ
Sbjct: 434 VPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSMISPNNFPYRLRQ 493

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D 
Sbjct: 494 APGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA 553

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   +   +K   TT V +   VPV   Y++AW   D   QFR DIY  D
Sbjct: 554 -GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDIYNYD 605



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 5/117 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N              + S  P    +  
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVHEGTTAPYLASLAPPQHPQ-Y 199

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +  +A+     +  R  WP++   P L  G  S  +  LRE L  +G L P     
Sbjct: 200 EKMHQALKEM--LADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVVPAP 254


>gi|320156749|ref|YP_004189128.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
 gi|319932061|gb|ADV86925.1| L,D-transpeptidase YcbB [Vibrio vulnificus MO6-24/O]
          Length = 518

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 100/395 (25%), Positives = 171/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +  + +F N  +R+    D  +P+  +             
Sbjct: 149 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 195

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKL 144
                        +  L LG+       L +RL + G            +D  +E AVK 
Sbjct: 196 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 242

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 243 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 300

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 301 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 360

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +L   NI +++    +  V  + +DW     +   +  RQ  G  NA+   K    ++  
Sbjct: 361 FLTKQNIEIVEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 420

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK              +    T +
Sbjct: 421 IFLHDTPSKSLFQEDSRAFSSGCVRVQNADQFALQLLKTQ-GLEEELSNLATRQEANTMI 479

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 480 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 513


>gi|165924622|ref|ZP_02220454.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938929|ref|ZP_02227482.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009934|ref|ZP_02230832.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|167399976|ref|ZP_02305494.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167419803|ref|ZP_02311556.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|270486929|ref|ZP_06204003.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503394|ref|YP_003567456.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
 gi|152960577|gb|ABS48038.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
 gi|165913076|gb|EDR31700.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165923682|gb|EDR40814.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991330|gb|EDR43631.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166962544|gb|EDR58565.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050684|gb|EDR62092.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|262365029|gb|ACY61586.1| hypothetical protein YPD8_0898 [Yersinia pestis D182038]
 gi|270335433|gb|EFA46210.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294353853|gb|ADE64194.1| hypothetical protein YPZ3_1284 [Yersinia pestis Z176003]
          Length = 569

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 96/291 (32%), Positives = 143/291 (49%), Gaps = 8/291 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L   
Sbjct: 266 TDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGH 325

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ NP W +P S
Sbjct: 326 V--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTS 383

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNFIFRQDPGK 304
           ++++D++   R D  Y + N   ++         +    +DW+  SP    +  RQ PG 
Sbjct: 384 LVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPYRLRQAPGA 443

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 444 NNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWN 502

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 503 DARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 553



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +++N  +           + S  P   +   
Sbjct: 92  YLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEGSTASYLASLAPQHPQ--Y 149

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + ++A+     +  R  WP++P  P L  G  S  +  LRE L  +G L P+  +
Sbjct: 150 DKMQQALKLM--LADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPV 203


>gi|113970169|ref|YP_733962.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113884853|gb|ABI38905.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 542

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 107/419 (25%), Positives = 178/419 (42%), Gaps = 43/419 (10%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKE------TIAQTEKAIAFYQDILSRGGWPELP- 98
             +  + DN+   +D   +   P  S                +     +     W  L  
Sbjct: 119 RQMQLQLDNYWRYLDTQAECITPCRSAALMPTDAYFRAVVLKLKQLMALAESSSWETLIL 178

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLD--------------------------------- 125
              L  G  S  +  + +RL + G L                                  
Sbjct: 179 EDKLSPGQESPLIALIVQRLFLLGFLADKPSPVSETAADPEALSPDVTTHPESKAYPAQG 238

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +    + ++  + +A+K+FQ +HGL   G++   TL  +N     R + L  N +R + 
Sbjct: 239 SADKNPMLYNDELVAAIKVFQTQHGLQADGVIGKQTLYWLNQSPYARAQLLAKNTLRQQI 298

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
              + +   Y+++N+PA  L+ VE GKV L S VIVG+  R TP+L S I+ ++ NP W 
Sbjct: 299 FT-RTLPASYLVINVPAFELQFVEAGKVILNSKVIVGKASRPTPLLSSHISSVVVNPQWR 357

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPG 303
           +PR+I+++D++  +RQD  YL+D    + D  G  V     +W   +     +   Q PG
Sbjct: 358 VPRTIVRRDILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQELASSHFPYRLVQRPG 417

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   K  F +  + Y+H T EP LF    R  +SGC+RV  + +L  W        
Sbjct: 418 AKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVEKVEELARWFQTHLVKD 477

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +R   +    T ++    L+  +PV+ VY +AW      IQ+R+DIY L+      +P 
Sbjct: 478 TRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRNDIYHLEAEFTQAVPA 536


>gi|37680299|ref|NP_934908.1| hypothetical protein VV2115 [Vibrio vulnificus YJ016]
 gi|37199046|dbj|BAC94879.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 535

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 101/395 (25%), Positives = 171/395 (43%), Gaps = 36/395 (9%)

Query: 27  VEKPIHASVLDEIINESYHSIV-NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           +   I A  L   +      +  + +F N  +R+    D  +P+  +             
Sbjct: 166 LSADIQAGYLATFVRSLRSPLQRHQQFANRYSRLLKARDHAVPLFHQ------------- 212

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKL 144
                        +  L LG+       L +RL + G            +D  +E AVK 
Sbjct: 213 -------------VGLLKLGDKLPDRANLIKRLEVVGLETSHLKRDIKYYDTQLELAVKQ 259

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ  HGL   G+V   TL+ +N+    R+  + +N  R +   E++     VLVN+P   
Sbjct: 260 FQKMHGLTQDGVVGPITLKWLNMTPAQRLHSMALNSERSRLWPEER--DLLVLVNVPGYE 317

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           ++    G+    S V+VGR  R+TPI+  +++ ++ NP W +P++I+ KD++  ++ D  
Sbjct: 318 MKFWYKGEEIFESKVVVGRKSRKTPIMVGKMDGVVLNPVWNVPKTIMVKDILPKVKYDQS 377

Query: 265 YLKDNNIHMIDEKGKE--VFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +L   NI +I+    +  V  + +DW     +   +  RQ  G  NA+   K    ++  
Sbjct: 378 FLTKQNIEIIEGWDSQTAVNPQTIDWTKVSLKSFPYKMRQLAGDKNALGLYKFNIPNKRA 437

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            ++HDTP   LF    R  +SGCVRV+N     + LLK              +    T +
Sbjct: 438 IFLHDTPSQSLFQEDSRAFSSGCVRVQNADQFALQLLKTQ-GLEEELSNLATRQEANTMI 496

Query: 381 KLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            L   +PVH +Y + W   +  + +RDDIY  D V
Sbjct: 497 PLKRRIPVHIIYQTVWFEGE-ELNYRDDIYQYDLV 530


>gi|322832248|ref|YP_004212275.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321167449|gb|ADW73148.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 616

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 93/308 (30%), Positives = 146/308 (47%), Gaps = 9/308 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            P       +   +  AVK FQ   GL+  G++   T + +N    LR   L +N+ R++
Sbjct: 308 APVAVADNQYTPDLVEAVKRFQKWQGLEADGIIGGRTRQWLNASPQLRATLLALNIQRLR 367

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L         ++VNIP   L    NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 368 ILPGNV--NTGIMVNIPNYQLTYYLNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 425

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFR 299
            +P +++++D++     +P Y + +   ++         +    +DW    P    +  R
Sbjct: 426 NVPTTLVREDIVPKAMNNPGYFQQHGYQVLSGWSNDAEVIDPSMIDWAMISPNHFPYRIR 485

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF+  +R  +SGCVRV    +L   LL+D
Sbjct: 486 QAPGVSNSLGRYKFNMPSSDAIYLHDTPNHNLFSKDIRALSSGCVRVNKASELANMLLQD 545

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVG 418
              W+   I   ++   TT V +   +PV   Y++AW   D   QFR DIY  D+ V  G
Sbjct: 546 A-GWNDTRISSALQGGNTTYVAIRHHIPVKLFYLTAWVADDGKPQFRTDIYNYDSTVRSG 604

Query: 419 IIPLPEDH 426
              LP+  
Sbjct: 605 AQILPQAE 612



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 32/119 (26%), Gaps = 6/119 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +         S     +     +++N  +           + +  P       
Sbjct: 133 YLQFTSSVEANGDKWLYSATPYKMTTPSLTVINQWQLAVRQGNTSHYLSTLAPQHP--YY 190

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +   A+     +     WP +     L     S  V  LRE L  +G +  S   +  
Sbjct: 191 TKMHDALKIM--LTDNRPWPVMTGSASLRPDQISDDVPALREILTRTGMMVASPEENKV 247


>gi|325293005|ref|YP_004278869.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
 gi|325060858|gb|ADY64549.1| hypothetical protein AGROH133_06435 [Agrobacterium sp. H13-3]
          Length = 645

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 104/410 (25%), Positives = 172/410 (41%), Gaps = 23/410 (5%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L          +  + L    +   ++ +     +       +   + S  P  S    
Sbjct: 228 VLAYVQDTTRGRVDPNRLSGYHDFKRKTVNLAPVLKLAGLSPDIAAYLRSREP--SNAEY 285

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVS----VQRLRERLIISGDLDPSKGL 130
              +  +A  +         ++P    L  GNSS      V+ +  R   +   + +  +
Sbjct: 286 LALKAELARLRSEGDAANTVKVPADLVLKPGNSSGDMASVVKAIEHRASPAFKAEHAAII 345

Query: 131 SVA-----FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIK 184
           S       +   +   VK FQ  +GL   G++  +T+ AM     D RI ++QV + +I+
Sbjct: 346 SGYQQTPDYTPDLVDLVKAFQSENGLKADGVIGRATVRAMVGESNDARIAKVQVAMEQIR 405

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L    +G RYVL+N PA       +G+      V+VG    QT      I  + FNPYW
Sbjct: 406 WLPA-DLGQRYVLINQPAFMAYYHNDGQEQFGMKVVVGSKANQTYFFQDEIQTVEFNPYW 464

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P+SII  +M+  LR+DP YL      +    G+ V    V+W          RQ P  
Sbjct: 465 GVPQSIIVNEMLPKLRRDPSYLDRLGYEVQVG-GRAVSSTSVNWFGSTNA-VSVRQPPSS 522

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   KI F + +  YMHDTP    FN  +R  + GC+R+ +   +   +L      S
Sbjct: 523 DNALGDLKILFPNAHAIYMHDTPAKSFFNRDMRALSHGCIRLVDPRRMAAAVL----GTS 578

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              + E +   K   V++  ++PV+  Y +AW  K   +QF DD+Y  D+
Sbjct: 579 VDKVNEQIAAGKNRAVQVPVKIPVYVAYFTAWPDKAGKVQFFDDVYDRDS 628


>gi|310767192|gb|ADP12142.1| hypothetical protein EJP617_24610 [Erwinia sp. Ejp617]
          Length = 615

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 117/470 (24%), Positives = 191/470 (40%), Gaps = 77/470 (16%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL          +    S +   +     +++N  +       ++  + S  P   +   
Sbjct: 134 YLQFTSSAPSKGEAWLYSTVPYRLEAPSMTVINQWQQALASGNLNGFVRSLAPQHPQ--Y 191

Query: 76  AQTEKAIAFY----------------------------QDILSRGGWPELPIRPLHL--- 104
           A+  +A+                               +DIL R G       P+     
Sbjct: 192 ARMHQALKSLLADTRPWPRIVDKQTLRPGQISNDVSALRDILQRNGMMSSANEPVKPAAE 251

Query: 105 --GNSS-VSV---------QRLRERL----------IISGDLDPSKGLSVAFD------- 135
             G      V           L+ R            +SGD+  S      F+       
Sbjct: 252 VVGAVDAPLVHDDDNAQPDANLQTRADNNRVVSPSANLSGDVTDSAAAPNVFNGQAALGS 311

Query: 136 ------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                   +  A+K FQ   GL+  G + + T E +NV    R   L +N+ R++ L + 
Sbjct: 312 QANTYSPQLVEALKRFQRWQGLEADGAIGTRTREWLNVSPQQRATLLALNIQRLRLLPDD 371

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P +
Sbjct: 372 M--QNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTT 429

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQDPGK 304
           +++KD++  +++DP YL  +   ++     E   V    ++W++       +  RQ PG 
Sbjct: 430 LVRKDIVPKVKRDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIRQAPGA 489

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+
Sbjct: 490 TNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD-VGWN 548

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              I   +K   T  V +   +PV+  Y++AW  +D   Q+R DIY  DN
Sbjct: 549 DARISGTLKEGNTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDN 598


>gi|117920334|ref|YP_869526.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117612666|gb|ABK48120.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 558

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 180/439 (41%), Gaps = 59/439 (13%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKE------TIAQTEKAIAFYQDILSRGGWP 95
           +     +  + DN+   +D   +   P +S                +     +     W 
Sbjct: 115 QLKLRQMQLQLDNYWQYLDAQAECTAPCLSAALIPKDTYFRAVVLKLKQLMALAESSSWE 174

Query: 96  ELP-IRPLHLGNSSVSVQRLRERLIISGDLD----------------------------- 125
            L     L  G  S  +  + +RL + G L                              
Sbjct: 175 TLILEDKLSPGQESPLIAPIAQRLFLLGFLAEMPSTASESVADEAALPVSELGSEPTIEP 234

Query: 126 --------------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                                +   S+ +D  +  A+K FQ +HGL   G++   TL  +
Sbjct: 235 DIISPDATTHAGTVARTEQASTDNNSMPYDDELVRAIKNFQTQHGLQADGVIGKQTLYWL 294

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           N     R + L  N +R + L  + +   Y+++NIPA  L+ VE GKV L S VIVG+  
Sbjct: 295 NQSPYARAKLLAKNTLRQQ-LFTRTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKAS 353

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
           R TP+L S I+ ++ NP W +PR+I+++D+M  +RQD  YL+D    + D  G  V    
Sbjct: 354 RPTPLLSSHISSVVLNPQWRVPRTIVRRDIMPHIRQDGHYLQDRGFDVYDYDGARVEHSP 413

Query: 286 VDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
            +W   +     +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC
Sbjct: 414 QEWQELASSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGC 473

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +RV  + +L  W        +R   +    T ++    L+  +PV+ VY +AW      I
Sbjct: 474 IRVEKVEELARWFQTHLVKDTRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQI 533

Query: 404 QFRDDIYGLDNVHVGIIPL 422
           Q+R+DIY L+      +P 
Sbjct: 534 QYRNDIYHLEVEFTQAVPA 552


>gi|114047641|ref|YP_738191.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889083|gb|ABI43134.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 558

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 109/435 (25%), Positives = 177/435 (40%), Gaps = 59/435 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKE------TIAQTEKAIAFYQDILSRGGWPELP- 98
             +  + DN+   +D   +   P  S                +     +     W  L  
Sbjct: 119 RQMQLQLDNYWQYLDTQAECITPCRSAALMPTDAYFRAVVLKLKQLMALAESSSWETLIL 178

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDP-------------------------------- 126
              L  G  S  +  + +RL + G L                                  
Sbjct: 179 EDKLSPGQESPLIAPIAQRLFLLGFLAEMPSTASESVVDKAALPVSELGSEPVIKSDIIS 238

Query: 127 -----------------SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                            +    + +D  +  A+K FQ +HGL   G++   TL  +N   
Sbjct: 239 PEATNQAETVARTEQAATDNNPMRYDDELVRAIKNFQTQHGLQADGVIGKQTLYWLNQSP 298

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R + L  N +R++    + +   Y+++NIPA  L+ VE GKV L S VIVG+  R TP
Sbjct: 299 YARAKLLAKNTLRLQIFT-RTLPASYLVINIPAFELQFVEAGKVILNSKVIVGKASRPTP 357

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +L S I+ ++ NP W +PR+I+++D++  +RQD  YL+D    + D  G  V     +W 
Sbjct: 358 LLSSHISSVVVNPQWRVPRTIVRRDILPHIRQDGHYLQDRGFDVYDYDGARVEHSPQEWQ 417

Query: 290 --SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
             +     +   Q PG  NA+   K  F +  + Y+H T EP LF    R  +SGC+RV 
Sbjct: 418 ELASSHFPYRLVQRPGAKNALGRYKFHFDNSFSVYLHGTSEPSLFKKTDRALSSGCIRVE 477

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
            + +L  W        +R   +    T ++    L+  +PV+ VY +AW      IQ+R+
Sbjct: 478 KVEELARWFQTHLVKDTRLWDKLTPNTTQSQWFALSDTMPVYTVYWTAWLDDAGQIQYRN 537

Query: 408 DIYGLDNVHVGIIPL 422
           DIY L+      +P 
Sbjct: 538 DIYHLEAEFSQAVPA 552


>gi|258546017|ref|ZP_05706251.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258518746|gb|EEV87605.1| peptidoglycan binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 599

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 13/329 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             LP   L  G +  +V  LRE+L        + G S  FD  +  AV  +Q  HGL   
Sbjct: 272 QPLPKVTLKQGMNHEAVAILREKLGA----PATDGDSTYFDGALAEAVTAYQQSHGLKAD 327

Query: 155 GMVDSSTLEAMNVPVD-----LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           G+V   T   +N           + +L +N+ R++ +  Q MG  YVLVNIP+  ++   
Sbjct: 328 GIVSGKTRNLLNGNKASSGGNASVDRLMINMERLRWMP-QDMGESYVLVNIPSYYVKMYR 386

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
             +    S  +VG+ DRQTP    ++  I+ +P W +P +I++KD +  LR +P      
Sbjct: 387 GSEEIYASKAVVGQRDRQTPAFTDKLRHIVMSPTWTVPPTIMKKDKINKLRSNPGAFD-G 445

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +   +   G+ V    VDW++P    +  RQ PG  NA+   K  F +++  Y+HDTP  
Sbjct: 446 SFEAVVG-GRVVRPSAVDWSAPGATGYRLRQKPGARNALGRVKFLFPNKHAIYLHDTPSK 504

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
            LF    R  +SGCVR++   +    LL++T  WS   I++ +   K   V    + P++
Sbjct: 505 SLFGRNDRALSSGCVRLQKPEEFANILLQNT-NWSAERIKKAMNQEKEQWVNTPEQTPIY 563

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            VY + WS  D  IQ  +DIYG D   + 
Sbjct: 564 LVYWTTWSDPDGKIQTANDIYGKDGALLQ 592


>gi|188534256|ref|YP_001908053.1| hypothetical protein ETA_21290 [Erwinia tasmaniensis Et1/99]
 gi|188029298|emb|CAO97175.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 612

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 8/291 (2%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
              +  +   +  A+K FQ   GL+  G +   T E +NV    R   L +N+ R++ L 
Sbjct: 307 GNAANTYTPQLVEALKRFQRWQGLEADGAIGQRTREWLNVSPQQRATLLALNIQRLRLLP 366

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P
Sbjct: 367 DDMHNG--IMVNIPNYSLAYYVNGREILASRVIVGRPDRKTPLMRSALNNVVLNPPWNVP 424

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFRQDP 302
            ++I+KD++  ++QDP YL  +   ++       + V    +DW+        +  RQ P
Sbjct: 425 TTLIRKDIVPKVKQDPAYLYKHGYTLLSGWSSEAQVVDPSMIDWSMVSAASFPYRIRQAP 484

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   
Sbjct: 485 GPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD-VG 543

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
           W+   I   +K   T  V +   +PV+  Y++AW   D   QFR DIY  D
Sbjct: 544 WNDTRISSTLKEGDTRFVSIRHRIPVNLYYLTAWVADDGQPQFRTDIYNYD 594


>gi|312961568|ref|ZP_07776069.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
 gi|311284247|gb|EFQ62827.1| hypothetical protein PFWH6_3485 [Pseudomonas fluorescens WH6]
          Length = 533

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 112/401 (27%), Positives = 180/401 (44%), Gaps = 17/401 (4%)

Query: 30  PIHASVLDEIINES--------YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
            +H   L +   E              +      +   DM    D    S +        
Sbjct: 136 DLHFGRLQQSRFEPLWHSQPPARDPDTDVLALAAVGLQDMAQAFDQARPSADLYRSLRNV 195

Query: 82  IAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVE 139
            +  +       W  +   PL   G     V  L  RL   G L    +G    +   + 
Sbjct: 196 YSSMRQQPL-PHWDPVGSGPLLRPGMEDPRVPELARRLHSGGYLPAERQGNGKQYSPELV 254

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           SAVK FQ+ H L   G++ + T+  +N+   +R  QL++NL R + L  + +    VLVN
Sbjct: 255 SAVKAFQLSHSLQSDGVIGAGTVAELNISPAMRREQLRINLERFRWL-AKDLEPEGVLVN 313

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           + AA L   ++G    ++ + VGR +RQTP+L SRI R+  NP W IP +I+++D +  +
Sbjct: 314 VAAAQLSVYQSGIPVWQTRLQVGRAERQTPLLKSRITRLTLNPTWTIPPTIMREDKLPAI 373

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R +P+YL+  N+ ++D +G  +  E +DW    P N + RQ+ G  N +    + F +  
Sbjct: 374 RLNPEYLRQQNLQVLDAEGHALAPELIDW--ARPGNILLRQEAGPRNPLGKIVMRFPNPY 431

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
           + Y+HDTP   LF    R  +SGCVRV   + L   L+       R   +E++ T  T  
Sbjct: 432 SVYLHDTPSQPLFTKGPRAFSSGCVRVEQPLLLRDLLVSPAE---RARTDELLATGVTHE 488

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +LAT VPV   Y +    +   + +  DIY  D V +  +
Sbjct: 489 FRLATPVPVLLGYWTVEVDRQGGLVYAPDIYARDLVLMKAM 529


>gi|15641281|ref|NP_230913.1| hypothetical protein VC1268 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|227081440|ref|YP_002809991.1| hypothetical protein VCM66_1223 [Vibrio cholerae M66-2]
 gi|229505145|ref|ZP_04394655.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229511183|ref|ZP_04400662.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229518302|ref|ZP_04407746.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229608165|ref|YP_002878813.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|298498640|ref|ZP_07008447.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655753|gb|AAF94427.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|227009328|gb|ACP05540.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|229345017|gb|EEO09991.1| hypothetical protein VCC_002326 [Vibrio cholerae RC9]
 gi|229351148|gb|EEO16089.1| hypothetical protein VCE_002590 [Vibrio cholerae B33]
 gi|229357368|gb|EEO22285.1| hypothetical protein VCF_000353 [Vibrio cholerae BX 330286]
 gi|229370820|gb|ACQ61243.1| hypothetical protein VCD_003083 [Vibrio cholerae MJ-1236]
 gi|297542973|gb|EFH79023.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 524

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|254848392|ref|ZP_05237742.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745664|ref|ZP_05419612.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262159059|ref|ZP_06030171.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
 gi|254844097|gb|EET22511.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255736739|gb|EET92136.1| L,D-transpeptidase YcbB [Vibrio cholera CIRS 101]
 gi|262029244|gb|EEY47896.1| L,D-transpeptidase YcbB [Vibrio cholerae INDRE 91/1]
          Length = 523

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 132 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 188

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 189 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 247

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 248 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 305

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 306 DAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 365

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 366 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 426 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 479

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 480 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|153801328|ref|ZP_01955914.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229529651|ref|ZP_04419041.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
 gi|124123153|gb|EAY41896.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229333425|gb|EEN98911.1| hypothetical protein VCG_002746 [Vibrio cholerae 12129(1)]
          Length = 524

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKLIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|153823871|ref|ZP_01976538.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
 gi|126518613|gb|EAZ75836.1| putative peptidoglycan binding domain protein [Vibrio cholerae B33]
          Length = 519

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 132 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 188

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 189 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 247

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 248 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 305

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 306 DAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 365

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 366 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 426 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 479

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 480 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|114562617|ref|YP_750130.1| peptidoglycan binding domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114333910|gb|ABI71292.1| Peptidoglycan-binding domain 1 protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 473

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 100/334 (29%), Positives = 159/334 (47%), Gaps = 4/334 (1%)

Query: 82  IAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +     +     WP +     L  G+   S++++ +RL + GD        + +   +  
Sbjct: 121 LRKLMWLSQTQDWPAITLEGLLRPGDRHPSIKQINQRLWLLGDAYEYLEDEIDYQPALVQ 180

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +VK FQ RHGL    ++   TL  +N     R   L  + +     L Q +   Y+L+NI
Sbjct: 181 SVKRFQSRHGLKTDAVIGPKTLFWLNQTPQQRASLLAKSFVEKTVYLSQ-LPQPYLLINI 239

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA  +  V+  +V L S VIVG+  RQTP++  +I+ I+ NP W +PR +++KD++  +R
Sbjct: 240 PAFQMVLVDQNQVVLASKVIVGKSYRQTPVMTGQISNIVINPTWTVPRQLLRKDILPQVR 299

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSR 318
            +  Y  D +  + D +G  V      W       F +R  Q PG  NA+   K  F + 
Sbjct: 300 SNGAYFADRHFDVFDYEGHRVDKTPQQWQQAATGKFPYRVVQRPGSGNALGRYKFHFNND 359

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
            + Y+HDTP P +F +V R  +SGCVR+  +  L  W         R          +T 
Sbjct: 360 QSVYLHDTPTPEMFAHVERDISSGCVRIEKVQQLADWFANHLVIDKRTWAHLQSNHTQTQ 419

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              L++ +PVH VY  AW  +  + Q+RDDIY L
Sbjct: 420 WFALSSSLPVHMVYWRAWVDEQHVAQYRDDIYQL 453


>gi|153827569|ref|ZP_01980236.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149738468|gb|EDM52864.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 524

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYKQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKLIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HHMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|153212308|ref|ZP_01948096.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116686|gb|EAY35506.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 524

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|270261208|ref|ZP_06189481.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
 gi|270044692|gb|EFA17783.1| hypothetical protein SOD_a04330 [Serratia odorifera 4Rx13]
          Length = 611

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 112/467 (23%), Positives = 184/467 (39%), Gaps = 74/467 (15%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +         S +   +    ++++N  +      +    +    P   +   
Sbjct: 133 YLQFVSAIGANGNSWLYSNIPYKLGLPPNAVINQWQLAVRQGKTLAYVTKLAPQHPQ--Y 190

Query: 76  AQTEKAI----------------------------AFYQDILSRGG-----------WPE 96
           A+  +A+                            A  ++IL+R G            P 
Sbjct: 191 AKMHQALRDMLADNRPWPQMANGPSLRPDQLSSDIAALREILARNGMLTAASVQTQEPPA 250

Query: 97  LPIRPL-HLGNSSVSVQRLRER----------------LIISGDLD-------PSKGLSV 132
           +         +  +SV   + R                L  S +         P      
Sbjct: 251 VLTGSRNEPDDGGLSVDEEKSRESKSVVISPSAAPVKDLAASPESPFAQQPAGPVTVTDN 310

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+   +   VK FQ   GL   G++ + T E +NV    R   L +N+ R++ L      
Sbjct: 311 AYTPDLVEGVKRFQKWQGLTADGVIGARTREWLNVSPQTRASLLALNIQRLRILPGYV-- 368

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++VNIP  SL   +NG   L S VIVGR  R+TP+++S +N ++ NP W +P ++++
Sbjct: 369 DTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMNSALNNVVVNPPWNVPTTLVR 428

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEPPNFI--FRQDPGKINA 307
           +D++    +D  Y + +   ++         +    +DWN     NF    RQ PG  N+
Sbjct: 429 EDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWNMVSARNFPYRIRQAPGATNS 488

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   
Sbjct: 489 LGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQDA-GWNNTR 547

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   +K   TT V +   +PV   Y++AW   D   QFR DIY  D+
Sbjct: 548 VSSTLKGGNTTYVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDD 594


>gi|121729970|ref|ZP_01682389.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674156|ref|YP_001216833.1| hypothetical protein VC0395_A0887 [Vibrio cholerae O395]
 gi|121628291|gb|EAX60802.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316039|gb|ABQ20578.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227013185|gb|ACP09395.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 524

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 181/391 (46%), Gaps = 19/391 (4%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSRGGW 94
            ++           +    +A  +  +   +   + +     Q  +A      I      
Sbjct: 133 GQLDQPLALPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFNEVA 192

Query: 95  PELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGL 151
               +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  HGL
Sbjct: 193 LYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKMHGL 251

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G
Sbjct: 252 QPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAG 309

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++
Sbjct: 310 REVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHM 369

Query: 272 HMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            +I      + +    +DW + +P    +  RQ  G  NA+ + K    +    Y+HDTP
Sbjct: 370 EIIRGWSDPEVIDPALIDWETVDPATFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTP 429

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LFNN  R  +SGC+RV N       LL +    +            T  + L   +P
Sbjct: 430 SKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKKRIP 483

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           VH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 484 VHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|310815557|ref|YP_003963521.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
 gi|308754292|gb|ADO42221.1| peptidoglycan binding domain-containing protein [Ketogulonicigenium
           vulgare Y25]
          Length = 547

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 112/421 (26%), Positives = 188/421 (44%), Gaps = 26/421 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVN--DRFDNFLARVDMGI-DSDIPIISKETIA 76
           + +G +L    +    +  +I       V+     +   ++    +  +  P  S    A
Sbjct: 127 VSLGQALHGGFLTPGRVISLIK-RQAPQVDGVALLNAMTSQSAGAVLRALTP--SDAQYA 183

Query: 77  QTEKAIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
              +A A      + GGW           L LG+   +V  LR RL++ G + PS  LS 
Sbjct: 184 GLMRARAQLDAAEAAGGWGGEVFAGAAGKLQLGDQGDAVLSLRNRLMLQGYMAPS--LSP 241

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            FD  +   V+ FQ  HGL   G+V + TL  +N+ +D RI+Q+ V + R +    + +G
Sbjct: 242 VFDQSLLLGVQAFQTAHGLATDGVVGAGTLAELNMGIDARIQQVLVAMERARW-SNKPLG 300

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSI 250
            R++ VN+         NG    R+  ++G    DR+TP     +N ++ NP W +PRSI
Sbjct: 301 ARHIWVNLADYHTVIRNNGMDEFRTRSVIGARGADRETPEFSDIMNHMVVNPSWHVPRSI 360

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAM 308
           +  + +  L+++P  +   +I++ D  G+ +    +D+N+    NF F  R+ P + NA+
Sbjct: 361 VVGEYLPQLQRNPYAVS--HINVQDGSGRAIDRSLIDFNAYNASNFPFSMREPPSRGNAL 418

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K  F ++ N Y+HDTP   LF    R  + GC+R+ +  D    LL    +  R   
Sbjct: 419 GLVKFMFPNQWNIYLHDTPSKDLFARETRAFSHGCIRLADPFDFAYQLLGPQTSDPRGLF 478

Query: 369 EEVVKTRKTTPVKLA-------TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           +  + T + T V L          +PVH  Y +        + FR DIYG D    G + 
Sbjct: 479 QRTLDTGRETRVDLEQPLPVQPQPLPVHLDYRTTVIAPSGAVTFRRDIYGRDAAIWGAMA 538

Query: 422 L 422
            
Sbjct: 539 Q 539


>gi|262169418|ref|ZP_06037110.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
 gi|262022231|gb|EEY40940.1| L,D-transpeptidase YcbB [Vibrio cholerae RC27]
          Length = 523

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 181/391 (46%), Gaps = 19/391 (4%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSRGGW 94
            ++           +    +A  +  +   +   + +     Q  +A      I      
Sbjct: 132 GQLDQPLALPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFNEVA 191

Query: 95  PELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMRHGL 151
               +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  HGL
Sbjct: 192 LYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKMHGL 250

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G
Sbjct: 251 QPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAG 308

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL ++++
Sbjct: 309 REVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHM 368

Query: 272 HMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            +I      + +    +DW + +P    +  RQ  G  NA+ + K    +    Y+HDTP
Sbjct: 369 EIIRGWSDPEVIDPALIDWETVDPATFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTP 428

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LFNN  R  +SGC+RV N       LL +    +            T  + L   +P
Sbjct: 429 SKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKKRIP 482

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           VH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 483 VHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|269102898|ref|ZP_06155595.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162796|gb|EEZ41292.1| L,D-transpeptidase YcbB [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 582

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 169/354 (47%), Gaps = 15/354 (4%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           E      KA+     + S   WP       + LGN   + + L   L + GDL   +   
Sbjct: 217 EQYTSNIKALEKLTQL-SHKRWPIFHVANKVSLGNPLPNAKNLITILEMLGDLPSYQAEQ 275

Query: 132 ------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                       +  AVK FQ RHGL P G++  +TL  ++     R+R + +N +R+  
Sbjct: 276 MLTENLDYLSPTLIEAVKSFQQRHGLSPDGVIGPNTLYWLSKSPQERLRVVALNTLRLSL 335

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
             +++     ++VNIPA  L A  N +  + S VIVGR  R TP++ S I  ++FNPYW 
Sbjct: 336 WPDEQPNQ--IVVNIPAYELTARLNNQSVMTSKVIVGRPSRNTPMMDSTITSVVFNPYWN 393

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPEP--PNFIFRQD 301
           +P SI++KD++  ++++P YL  N   ++        + V  ++W    P    +  RQ 
Sbjct: 394 VPTSIMRKDILPKVKRNPSYLTRNRYEILSSWSNPARISVNAINWRGVNPKTFPYRLRQK 453

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  NA+   K    +    Y+HDT    LFN   R  +SGCVRV     L   LL+ + 
Sbjct: 454 PGNKNALGRFKFNIPNDYAIYLHDTSSKRLFNKSDRALSSGCVRVEYAKGLAQLLLEYS- 512

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             S     +     +T  V L  ++PVH +Y +AW+  + +I +RDDIY  D +
Sbjct: 513 GVSDKRFIQYSSRTRTKTVVLKNKIPVHLIYQTAWAEGNGLIYYRDDIYHYDKM 566


>gi|254291719|ref|ZP_04962506.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422403|gb|EDN14363.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 524

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSQ---EAQLALHMAIGNQSLARIMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|229525867|ref|ZP_04415272.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339448|gb|EEO04465.1| hypothetical protein VCA_003512 [Vibrio cholerae bv. albensis
           VL426]
          Length = 524

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 181/394 (45%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HRMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|229521381|ref|ZP_04410800.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
 gi|229341479|gb|EEO06482.1| hypothetical protein VIF_001911 [Vibrio cholerae TM 11079-80]
          Length = 524

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 182/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + +P    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|300716096|ref|YP_003740899.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299061932|emb|CAX59048.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 616

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 109/390 (27%), Positives = 171/390 (43%), Gaps = 12/390 (3%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS-KETIAQTEKAIAFYQDI 88
            +    L + +      +         A      D  +P  S   +    E A       
Sbjct: 215 TLKPGQLSDDVPALRAILARTGMMTASAEGPKPTDEPVPTTSVPASFVDEEIASTPAPKP 274

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +           PL    ++ +   L     + G+  P+      + A +  AVK FQ  
Sbjct: 275 VDEQATVSPSATPLPENPNAANTPELAG--QVQGNAVPADPTH-IYSAELVEAVKRFQRW 331

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
            GL+P G +   T E +NV   LR   L +N+ R++ L +       ++VNIP  SL   
Sbjct: 332 QGLEPDGAIGPRTREWLNVSPQLRASLLALNIQRLRLLPDDMHNG--IMVNIPNYSLIYY 389

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
            NG   L S VIVGR DR+TP++ S +N ++ NP W +P +++++D++  ++QDP YL  
Sbjct: 390 LNGSQILASRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVRQDIVPKVKQDPAYLYK 449

Query: 269 NNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +N  ++         +    +DW         +  RQ PG  N++   K    S +  Y+
Sbjct: 450 HNYTLLSGWSNDAEVIDPSMIDWRMVSAASFPYRIRQAPGATNSLGRYKFNMPSSDAIYL 509

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF   +R  +SGCVRV    DL   LL+D   W+   I   +K   T  V + 
Sbjct: 510 HDTPNHNLFQKDIRALSSGCVRVNKASDLANLLLQDA-GWNDTRISSTLKEGDTRYVPIR 568

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +PV+  Y++AW   D   Q+R DIY  D
Sbjct: 569 HRIPVNLYYLTAWVADDGKAQYRTDIYNYD 598



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 6/124 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +    +    S +   +     S++N  +        +  + S  P   +   
Sbjct: 133 YLQFVSTVPAKGETWLYSNVPYKLEVPTLSVINQWQRAVEHGGTNAFVTSLAPQHPQ--Y 190

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               +A+     +     WP+L  +  L  G  S  V  LR  L  +G +  S       
Sbjct: 191 VLMHQALKTL--LADNHPWPQLAAKQTLKPGQLSDDVPALRAILARTGMMTASAEGPKPT 248

Query: 135 DAYV 138
           D  V
Sbjct: 249 DEPV 252


>gi|259908907|ref|YP_002649263.1| hypothetical protein EpC_22600 [Erwinia pyrifoliae Ep1/96]
 gi|224964529|emb|CAX56039.1| Peptidoglycan-binding domain 1 protein [Erwinia pyrifoliae Ep1/96]
 gi|283478902|emb|CAY74818.1| Uncharacterized protein ycbB [Erwinia pyrifoliae DSM 12163]
          Length = 615

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 116/472 (24%), Positives = 187/472 (39%), Gaps = 81/472 (17%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL          +    S +   +     +++N  +       ++  + S  P   +   
Sbjct: 134 YLQFTSSAPSKGEAWLYSTVPYRLEAPSMTVINQWQQALASGNLNGFVRSLAPQHPQ--Y 191

Query: 76  AQTEKAIAF----------------------------YQDILSRGGWPELPIRPLHL--- 104
           A+  +A+                               +DIL R G       P+     
Sbjct: 192 ARMHQALKSLLADTRPWPRIVDKQTLRPGQISNDVSALRDILQRNGMMSSANEPVKPAAE 251

Query: 105 --GNSSV----------------------SVQRLRERLIISGDLDPSKGLSVAFD----- 135
             G                           V      L  SGD+  S      F+     
Sbjct: 252 VVGAVDAPLVHDDDNAQPDANLLTRADNNRVVSPSANL--SGDVTDSAAAPNVFNGQAAL 309

Query: 136 --------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                     +  A+K FQ   GL+  G +   T E +NV    R   L +N+ R++ L 
Sbjct: 310 GSQANTYSPQLVEALKRFQRWQGLEADGAIGMRTREWLNVSPQQRATLLALNIQRLRLLP 369

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +P
Sbjct: 370 DDM--QNGIMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVP 427

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQDP 302
            ++++KD++  +++DP YL  +   ++     E   V    ++W++       +  RQ P
Sbjct: 428 TTLVRKDIVPKVKRDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSTVSAASFPYRIRQAP 487

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D   
Sbjct: 488 GATNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLLRD-VG 546

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           W+   I   +K   T  V +   +PV+  Y++AW  +D   Q+R DIY  DN
Sbjct: 547 WNDARISGTLKEGNTRFVPIRQRIPVNLYYLTAWVAEDGQPQYRTDIYNYDN 598


>gi|327483956|gb|AEA78363.1| L,D-transpeptidase YcbB [Vibrio cholerae LMA3894-4]
          Length = 536

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 93/394 (23%), Positives = 180/394 (45%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 132 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 188

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +D  +E  +K FQ  
Sbjct: 189 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDTSLEKPIKQFQKM 247

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 248 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 305

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 306 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 365

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + +P    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 366 HRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQLAGVQNALGTYKFNTPNSRAIYLH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 426 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 479

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 480 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 512


>gi|312171965|emb|CBX80222.1| Uncharacterized protein ycbB [Erwinia amylovora ATCC BAA-2158]
          Length = 615

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 114/472 (24%), Positives = 183/472 (38%), Gaps = 83/472 (17%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +    +    S +   +     +++N  +       +D  + S  P   +   
Sbjct: 134 YLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSFVRSLAPRHPQ--Y 191

Query: 76  AQTEKAIAFY----------------------------QDILSRGGWPELPIRPLHL--- 104
            +  +A+                               +DIL R G       P      
Sbjct: 192 VRMHQALKSLLADTRPWPQIVDKQTLRPGQISNDVPALRDILQRNGMMSAANEPARPPVE 251

Query: 105 -------------------------GNSSVSVQRLRERLIISGDLDPSKGLSVA------ 133
                                    G +S  V    +   ISGD   +            
Sbjct: 252 VVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAK---ISGDASNAAAEPNVFTGQAA 308

Query: 134 -------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +   +  A+K FQ   GL+  G +   T + +NV    R   L +N+ R++ L
Sbjct: 309 LGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQRLRLL 368

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +
Sbjct: 369 PDDMHNG--IMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNV 426

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQD 301
           P ++++KD++  ++QDP YL  +   ++     E   V    ++W+        +  RQ 
Sbjct: 427 PTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPYRIRQA 486

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL    
Sbjct: 487 PGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLL-HDV 545

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W    I   +K   T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 546 GWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|153829587|ref|ZP_01982254.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229515643|ref|ZP_04405102.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
 gi|148874921|gb|EDL73056.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|229347412|gb|EEO12372.1| hypothetical protein VCB_003301 [Vibrio cholerae TMA 21]
          Length = 524

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 95/394 (24%), Positives = 181/394 (45%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +D  +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNNVAYYDTSLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HRMEIIRGWSDPEVIDPALIDWETVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|292487843|ref|YP_003530718.1| hypothetical protein EAMY_1360 [Erwinia amylovora CFBP1430]
 gi|292899070|ref|YP_003538439.1| peptidoglycan binding protein [Erwinia amylovora ATCC 49946]
 gi|291198918|emb|CBJ46028.1| putative peptidoglycan binding protein [Erwinia amylovora ATCC
           49946]
 gi|291553265|emb|CBA20310.1| Uncharacterized protein ycbB [Erwinia amylovora CFBP1430]
          Length = 615

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 114/472 (24%), Positives = 183/472 (38%), Gaps = 83/472 (17%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +    +    S +   +     +++N  +       +D  + S  P   +   
Sbjct: 134 YLQFTSSVPAKGEAWLYSTVPYRLEAPSTTVINQWQQALAQGNLDSFVRSLAPRHPQ--Y 191

Query: 76  AQTEKAIAFY----------------------------QDILSRGGWPELPIRPLHL--- 104
            +  +A+                               +DIL R G       P      
Sbjct: 192 VRMHQALKSLLADTRPWPQIVDKQTLRPGQISNDVPALRDILQRNGMMSAANEPARPPVE 251

Query: 105 -------------------------GNSSVSVQRLRERLIISGDLDPSKGLSVA------ 133
                                    G +S  V    +   ISGD   +            
Sbjct: 252 VVGAVNAPLVHDDDNAQPDTGLGGQGENSAVVSPSAK---ISGDASNAAAEPNVFTGQAA 308

Query: 134 -------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                  +   +  A+K FQ   GL+  G +   T + +NV    R   L +N+ R++ L
Sbjct: 309 LGSPTNTYTPQLVEALKRFQRWQGLEADGAIGLRTRQWLNVSPPQRATLLALNIQRLRLL 368

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +       ++VNIP  SL    NG+  L S VIVGR DR+TP++ S +N ++ NP W +
Sbjct: 369 PDDMHNG--IMVNIPNYSLAYYVNGREILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNV 426

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEP--PNFIFRQD 301
           P ++++KD++  ++QDP YL  +   ++     E   V    ++W+        +  RQ 
Sbjct: 427 PTTLVRKDIVPKVKQDPMYLYKHGYTLLAGWSNEAEVVDPSMINWSMVSAASFPYRIRQA 486

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL    
Sbjct: 487 PGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLANLLL-HDV 545

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            W    I   +K   T  V +   +PV+  Y++AW  +D + QFR DIY  D
Sbjct: 546 GWDDARISGTLKEGNTRFVPIRHRIPVNLYYLTAWVAEDGLPQFRTDIYNYD 597


>gi|297578860|ref|ZP_06940788.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536454|gb|EFH75287.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 524

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 96/394 (24%), Positives = 182/394 (46%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DAGREVFEAKVMVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HRMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|152993866|ref|YP_001359587.1| hypothetical protein SUN_2290 [Sulfurovum sp. NBC37-1]
 gi|151425727|dbj|BAF73230.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 566

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 110/392 (28%), Positives = 197/392 (50%), Gaps = 15/392 (3%)

Query: 42  ESYHSIVNDRFDNF--LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-- 97
                   +          +   ++S +P+  +++  +  K +  Y+ +     +P++  
Sbjct: 162 SPKSFPSEEALAQAVSGGNIHAYLNSLLPM--EKSYRRLVKRLENYRVMEK---FPKIKY 216

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              PL LG+ S  V+ +++RL ISGD   +  +   FD  +E AVK +Q R+ L  +G V
Sbjct: 217 SNDPLKLGDWSPRVKEVKKRLQISGDYPKNAPVDWKFDRRLEQAVKTYQKRYLLKITGQV 276

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D +T+  +N P    I+ + VNL + K   +      Y+ VN+P  +L    NG++  ++
Sbjct: 277 DKTTMYYLNQPASKNIKAIIVNLDKTKLYPKH-FENEYIAVNVPDFNLRYYRNGEMIFKT 335

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            ++VGR+DR TPI   +I  ++ NP W IP ++I++D++ +LR++P YL++NNIH+    
Sbjct: 336 GIVVGRIDRPTPIFSDKIEYMVINPTWTIPDNLIKRDLIHVLRENPAYLEENNIHVFSGN 395

Query: 278 GK-EVFVEEVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
            +  V  E +D          + F Q PG  NA+   K  F ++ + Y+HDT    L   
Sbjct: 396 KEITVTQEMLDPYEHSDKKVPYRFVQYPGDSNALGRIKFMFPNKYSVYLHDTDNKSLLTR 455

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPT-WSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
             +  +SGC+RV    DL   LLK     ++R  I+ ++ T K   ++L   +PVH +Y 
Sbjct: 456 RYKIYSSGCMRVDKPFDLMDILLKHAKGRYTREDIDAIIATDKPKTIRLKKAIPVHILYF 515

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
           + +  +D +  F++DIY  D +        + 
Sbjct: 516 TVF-EEDGLAYFKNDIYLYDKIIEESTAGHKK 546


>gi|146299527|ref|YP_001194118.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146153945|gb|ABQ04799.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 526

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 201/414 (48%), Gaps = 18/414 (4%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII------S 71
           ++L          ++   LD     +   +    FD     +     + +  I       
Sbjct: 120 ILLTYNFEKYLNHLYKGKLDPKKLYTDWDLDEKTFDVNNVLIKAFNKNKLDSIVDNIQPK 179

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPS 127
            ET  Q  +++     I++     ++      + + L +++ ++  ++++L+   D+   
Sbjct: 180 SETYKQLLQSL----QIINSFPDEDIQAIENVKKITLKDTNNALINIKKKLLFWKDMSGK 235

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
             L+  +D     AVK FQ RHGL   G++   T+ A+N   + R +Q+  NL R +   
Sbjct: 236 DSLTDKYDEKTFEAVKKFQARHGLADDGVIGIGTISALNYSKERRKQQIIANLERWRWYP 295

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +   Y ++NIP  SL  VEN    L   ++VG   R+TPI+ S +  ++FNP W +P
Sbjct: 296 TE-LAENYFIINIPDYSLHVVENQDTTLVRNIVVGTSSRKTPIITSVLKTVVFNPTWTVP 354

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            +I+++D++  ++++  YL   NI + D  GK V      WN  +P N+ + Q PG  N+
Sbjct: 355 PTILKEDVVPAMKRNRNYLAKKNITIYDTSGKVVEPSA--WNENKPNNYRYVQSPGYNNS 412

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   KI F + ++ Y+HDT     F    R  +SGCVRV N ++L   +L D+  +S+  
Sbjct: 413 LGLMKILFPNHHSVYLHDTNHRNYFVRNNRSLSSGCVRVENPLELAEHILNDSIRFSKVK 472

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           I+ ++ ++KT   K+  +  ++  Y +AWS K+  + FR DIY LD+     + 
Sbjct: 473 IDTIIASKKTMSFKITKKYALYQWYWTAWSKKN-QLIFRADIYNLDSDLYSKLR 525


>gi|254226414|ref|ZP_04920001.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621036|gb|EAZ49383.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 524

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 94/394 (23%), Positives = 181/394 (45%), Gaps = 22/394 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 133 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 189

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +D  +E  +K FQ  
Sbjct: 190 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNNVAYYDTSLEKPIKQFQKM 248

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL P G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 249 HGLQPDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 306

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    + V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 307 DVGREVFEAKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 366

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + + +I      + +    +DW + +P    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 367 HRMEIIRGWSDPEVIDPALIDWETVDPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 426

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP   LFNN  R  +SGC+RV N       LL +    +            T  + L  
Sbjct: 427 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQ-GITLDDFPV-----STQAIALKK 480

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            +PVH +Y + W  ++ ++ +RDDIY  D + +G
Sbjct: 481 RIPVHIIYQTVWY-EEGVLHYRDDIYHYDALALG 513


>gi|90579750|ref|ZP_01235559.1| hypothetical amidase [Vibrio angustum S14]
 gi|90439324|gb|EAS64506.1| hypothetical amidase [Vibrio angustum S14]
          Length = 587

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 113/422 (26%), Positives = 192/422 (45%), Gaps = 31/422 (7%)

Query: 8   NKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI 67
             +   F  Y+     +  + KPI+ S               D  D +   +   ++   
Sbjct: 163 YYVYRAFQNYIATHRDVLFLSKPINMSKSMTKYA--------DGVDVYPMTLAK-LEQLR 213

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           P         T  AIA YQD+ +         +    G +  +   L + L   GD+D +
Sbjct: 214 PSY--IAFKPTMDAIAKYQDLPAHTLTSSNFKQVYRKGATLPNGHELIKVLYTLGDMDQA 271

Query: 128 KGLSVAFDA-----------YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
                 +D             V  ++K FQ RHGL   G++ ++T++ + +P D   R+L
Sbjct: 272 D-----YDRLSVVHNITNTGAVFESLKAFQKRHGLASDGIIGAATVQQLVMPYDDIARRL 326

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N +R+  L +   G  ++ VNIP   LE  + G V   S VIVGR  R T +  S I 
Sbjct: 327 ALNTLRVATLNKHAEGRPHIWVNIPNYKLEVFDKGNVVFESKVIVGRDSRPTNLFSSAIT 386

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPP 294
            ++ NPYW +P +I Q D++  ++ +  YLK +N+ +++       +    +DW +  P 
Sbjct: 387 TMVVNPYWNVPITIKQHDVIPKVKHNIDYLKQHNMQILNSWRDRTVISPSSIDWATVNPK 446

Query: 295 NFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F   F+Q PG  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL
Sbjct: 447 TFPHEFQQGPGPRNSLGRVKFLMPNDYAIFLHDTPSRGLFSKTKRDLSSGCVRVERAYDL 506

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
             ++++     +    ++++  +K   V L+  + V FVY++AW   D  +Q R+DIYG 
Sbjct: 507 ANYVIEYQNRGNIPEFKQMLDAQKQKTVSLSKRIDVDFVYLTAWVDNDGKVQMREDIYGY 566

Query: 413 DN 414
           D+
Sbjct: 567 DS 568


>gi|327393347|dbj|BAK10769.1| cell wall degradation amidase protein YcbB [Pantoea ananatis
           AJ13355]
          Length = 610

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 96/300 (32%), Positives = 151/300 (50%), Gaps = 8/300 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             + G    ++  + +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++
Sbjct: 302 PAAPGSVNVYNDELVAAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR 361

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L +       ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 362 LLPDDMHNG--IMVNIPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPW 419

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFR 299
            +P +++++D++  ++QDP YL  +   ++       + +    +DW+        +  R
Sbjct: 420 NVPTNLVRQDIIPKVKQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIR 479

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG+ N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 480 QAPGQTNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQD 539

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
              W+   I + +K   T  V +   +PV+  Y++AW   D   QFR DIY  DN     
Sbjct: 540 -VGWNDARISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNTARSA 598



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           YL     +    +    S     +     S++N   +   A      ++S +P   +   
Sbjct: 142 YLQFVSSVPAQGETWLYSTTPYKLAVPSVSVINAWQNAVNAGSSAAFVNSLVPQHPQ--Y 199

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
               KA+     +  +  WP++  R  L  G  S  V  LRE L  SG L        
Sbjct: 200 PLMHKALKSL--LEDKQPWPQIKNRDTLRPGQVSDDVPALREILRRSGMLSAQVTAPA 255


>gi|85716085|ref|ZP_01047061.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
 gi|85697084|gb|EAQ34966.1| hypothetical protein NB311A_10915 [Nitrobacter sp. Nb-311A]
          Length = 783

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 102/432 (23%), Positives = 173/432 (40%), Gaps = 47/432 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLA--RVDMGIDSDIPIISKETI 75
           ++          +H S +   +    H         N          +DS  P    E  
Sbjct: 316 MMDYARQAQSGRMHWSQVTADVQYPEHPIDPEQVLTNVTTAKDSSAALDSYNPPH--ELY 373

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLG--------NSSVSVQRLRERLIISGDLDPS 127
            + ++ +A  +   S G   E+       G             V ++R RL ++      
Sbjct: 374 RELKQKLAELRK-ASEGPLIEIANG---PGLVFRKNAVMEDPRVPQIRARLGMT-----Q 424

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKL 186
                 FDA V +AV+ FQ RH L P G++ ++T+ A+N P     I  + VN+ R + L
Sbjct: 425 NPDDTRFDADVAAAVREFQARHHLKPDGILGNNTVRALNGPKKDHTIDTIIVNMERWRWL 484

Query: 187 LEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFN 241
             +     +   Y ++NIP  SL+ +++G     + V+VG+     TP+L   +  I  N
Sbjct: 485 PRELGAPSLDDAYAILNIPDYSLKVMQHGAQIWSTRVVVGKPGLHATPLLTETMKYITVN 544

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SII K+ +  L+QDP  L    + +                          Q 
Sbjct: 545 PTWNVPPSIIYKEYLPALQQDPTVLSRMGLKL---------------ERDRNGGIHISQP 589

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--- 358
           PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC+RV+N       LL    
Sbjct: 590 PGERNALGRIRFNFPNKFLVYQHDTPDKHLFSKNKRAFSHGCMRVQNPDQYAATLLNIVL 649

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               ++   I   +  R    +   T VPVH  Y +A+  +   +Q R D+YG D   + 
Sbjct: 650 PQEHYTPEKIRS-MYGRNEFNINFPTPVPVHITYQTAFVDQAGKLQLRADVYGRDAKMLA 708

Query: 419 IIPLPEDHPIDS 430
           ++       +++
Sbjct: 709 LLRNSNGRDLET 720


>gi|291616920|ref|YP_003519662.1| YcbB [Pantoea ananatis LMG 20103]
 gi|291151950|gb|ADD76534.1| YcbB [Pantoea ananatis LMG 20103]
          Length = 620

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 96/300 (32%), Positives = 151/300 (50%), Gaps = 8/300 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             + G    ++  + +AVK FQ   GLD  G +   T E +NV    R   L +N+ R++
Sbjct: 312 PAAPGSVNVYNDELVAAVKRFQQWQGLDADGAIGLRTREWLNVSPQQRAALLALNIQRLR 371

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L +       ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 372 LLPDDMHNG--IMVNIPNYSLNYYNNGTKVLSSRVIVGRPDRKTPLMRSALNNVVLNPPW 429

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFR 299
            +P +++++D++  ++QDP YL  +   ++       + +    +DW+        +  R
Sbjct: 430 NVPTNLVRQDIIPKVKQDPTYLYKHGYTLLSGWSADSEVIDPSMIDWSMVSASSFPYRIR 489

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG+ N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D
Sbjct: 490 QAPGQTNSLGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGILLQD 549

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
              W+   I + +K   T  V +   +PV+  Y++AW   D   QFR DIY  DN     
Sbjct: 550 -VGWNDARISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGKTQFRTDIYNYDNTARSA 608


>gi|332141802|ref|YP_004427540.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551824|gb|AEA98542.1| putative periplasmic protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 462

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 106/382 (27%), Positives = 169/382 (44%), Gaps = 32/382 (8%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPEL------PIRPLHLGNSSV----------SVQRLR 115
           +  + Q + A AFY  I  +GGW  L          L    +            ++  L 
Sbjct: 78  QAQLKQMKSAYAFYSSIAQQGGWKALNEDLLLKNGALRKAAADETPIYSEEQAQAITALI 137

Query: 116 ERLII---------SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            RL           +  L         F+  VE+AVK FQ RHGL   G+V   TL A+N
Sbjct: 138 SRLGREYPSINTNCTHALTAVNSAPCVFNKDVENAVKDFQRRHGLLVDGVVGRKTLAALN 197

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           V    + +QL +N+ R++ + E+K    YVLVNIP   L  + NGKV     V+VG+   
Sbjct: 198 VTAKKKAQQLALNITRLE-MFEEKDSDAYVLVNIPEFRLRYISNGKVKATKDVVVGKPSW 256

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFV 283
            TP     I + + NP W IP SI  K++   +  +P YL++NNI +  +     + V  
Sbjct: 257 ATPSFSDHIEKFVVNPEWRIPISIATKEIAPKVADNPNYLEENNIVIRKDSFVDDELVDP 316

Query: 284 EEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             +DW   +P   +    + P + N +   K  F +R+  Y+HDTP    F    R  + 
Sbjct: 317 NTIDWEDMKPYQFDHFLVKLPNEKNPLGKVKYLFPNRHAVYVHDTPYQQWFKETNRAASH 376

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
           GC+R+ +   L   + ++    S   ++    +  ++    L   +P+H VY +AW+ ++
Sbjct: 377 GCIRLEDPFSLAQLIAEEQGVDSLMDNVISARELSQSKTFHLEEPLPIHLVYWTAWADEN 436

Query: 401 SIIQFRDDIYGLDNVHVGIIPL 422
               FR+DIY  D      +  
Sbjct: 437 GKANFRNDIYQRDRRDAEALTQ 458


>gi|312971055|ref|ZP_07785234.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|310336816|gb|EFQ01983.1| cell wall degradation protein [Escherichia coli 1827-70]
 gi|323165398|gb|EFZ51185.1| cell wall degradation protein [Shigella sonnei 53G]
          Length = 317

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 99/293 (33%), Positives = 151/293 (51%), Gaps = 7/293 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            P+  +  A+D  +  AVK FQ   GL   G +  +T + +NV    R   L +N+ R++
Sbjct: 10  KPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLR 69

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIPA SL   +NG   L S VIVGR DR+TP++ S +N ++ NP W
Sbjct: 70  LLPTEL--STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPW 127

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR--Q 300
            +P ++ +KD++  +R DP YL+ +   ++        +   +VDW++    N  FR  Q
Sbjct: 128 NVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQ 187

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S    Y+HDTP   LF    R  +SGCVRV    DL   LL+D 
Sbjct: 188 APGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDA 247

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 248 -GWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 299


>gi|91792858|ref|YP_562509.1| peptidoglycan binding domain-containing protein [Shewanella
           denitrificans OS217]
 gi|91714860|gb|ABE54786.1| Peptidoglycan-binding domain 1 [Shewanella denitrificans OS217]
          Length = 498

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 101/373 (27%), Positives = 165/373 (44%), Gaps = 5/373 (1%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRP 101
                V     +    +     S                +     +     WP + P   
Sbjct: 117 PMRGGVEPLARDEFNPLSDRQKSLAIEPKSNMYLAVMNHVRRMLWLDENADWPVIDPQGL 176

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +   S+  +  RL + GD              +ES +K FQ RHGL   G++   T
Sbjct: 177 LRRNDGHASIPAIAARLSLLGDF-HGAHQGYVLTPALESGLKAFQRRHGLKDDGVIGPKT 235

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +N     R R L VN +  +   + ++   Y+LVNIPA  +  V+ G++ L S VIV
Sbjct: 236 LSWLNQLPIERARLLAVNFVE-QSRYQAQLDDSYLLVNIPAFEMVLVDKGQIVLHSRVIV 294

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G+  RQTPI+   I+ ++ NP W +PR ++++D++  +R+D +YL +    + + +G++ 
Sbjct: 295 GKSYRQTPIMSGAISNLVINPTWTVPRRLLRQDVLPHVRKDGRYLAEKQFDVFNYQGQKQ 354

Query: 282 FVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            +   +W   +     +   Q PG+ N++   K  F +  N Y+HDTP P LF N  R  
Sbjct: 355 LLTAEEWQSLAYTRFPYKLVQRPGEHNSLGRYKFHFNNDKNIYLHDTPTPELFANAERAL 414

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+R+  + +L  W         R          KT    L   +PVH VY +AW  +
Sbjct: 415 SSGCIRIEKVAELANWFAVHRVNDKRTWRRLQSSKHKTQWFSLTHSLPVHLVYWTAWVDE 474

Query: 400 DSIIQFRDDIYGL 412
             + Q+R DIY  
Sbjct: 475 HHLAQYRSDIYHR 487


>gi|114570411|ref|YP_757091.1| peptidoglycan binding domain-containing protein [Maricaulis maris
           MCS10]
 gi|114340873|gb|ABI66153.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
          Length = 539

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 107/357 (29%), Positives = 167/357 (46%), Gaps = 7/357 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                        + +     WP +   P L  G+    V +LR RL   G LD      
Sbjct: 167 RDYDTLRA--EMMRVLAVTPIWPGVQSGPSLSAGDVGGRVDQLRTRLTAEGLLDGDWQEG 224

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +D  +E+AV+ +Q R  L PSG +D +TL  +N+P D RI QL  NL + +    + +
Sbjct: 225 DHYDIRLETAVRRYQGRTNLAPSGRMDQATLRQLNLPPDRRIGQLMANLEQRRWRT-RDL 283

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G R++ VN+    LEA E+G++     V+VGR    TP     +  I+ NP+W +P    
Sbjct: 284 GRRHIWVNLADFRLEAWEDGQLAREHEVMVGRQASSTPEFSEDMQYIVLNPWWGLPNGSA 343

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKINAMAS 310
           +       R++P   ++    + +  G+ + V E+DW+       +   Q PG  N M  
Sbjct: 344 RPRF-QSFRRNPSLARELGFRIYNRSGEAISVYEIDWSRWGGDWPYRMSQPPGATNPMGE 402

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K  F +RNN Y+HDT E   F    R  ++GC+RV++ + L  W+L     WSR  I+E
Sbjct: 403 VKFIFPNRNNIYIHDTTERDQFVRTRRDFSAGCIRVQDPLALAQWVLDGQDGWSRARIDE 462

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN-VHVGIIPLPEDH 426
           VV     T V L   +PVH  Y +     D  +++ +D+Y  D+ V    +   E H
Sbjct: 463 VVAGSSPTVVWLDDRIPVHIAYWTVVGDPDGRVRYLNDLYRRDSGVIDAYLAAHESH 519


>gi|262402380|ref|ZP_06078941.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
 gi|262351162|gb|EEZ00295.1| hypothetical protein VOA_000347 [Vibrio sp. RC586]
          Length = 522

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 97/386 (25%), Positives = 178/386 (46%), Gaps = 20/386 (5%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
            ++           +    +A  +  +D  I   +       ++ +  YQ +L+     +
Sbjct: 132 GQLNKPLAAPSEEAQLALHMAIGNQTLDQLIDEYTPRDPDY-QQLLHTYQSLLATES-QD 189

Query: 97  LP----IRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P         LG+       L  RL +   D+   +     +D  + + +K FQ  HGL
Sbjct: 190 IPLYEQTGLKRLGDPLTHRDALVHRLSLVNIDITEVRDDITFYDQALVNPIKQFQSMHGL 249

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            P G+V   T++ +N  +  R+  L +N  R++           ++VN+P  +++  + G
Sbjct: 250 KPDGVVGPETMKWLNKSMAERVSLLALNAERLRLWPA--PQDTAIVVNVPGFAMKYWDAG 307

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +    + V+VGRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + +
Sbjct: 308 QEVFEAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDHEYLAKHQM 367

Query: 272 HMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            +I      + V  + +DW S +P    +  RQ  G  NA+   K    +    Y+HDTP
Sbjct: 368 EIIRGWNDPEVVDPQLIDWASVDPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTP 427

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LFNN  R  +SGC+RV N       LL+          E      KT  + L   +P
Sbjct: 428 SKHLFNNAARAFSSGCIRVENAQKFAQTLLEQQGIVLNELPE------KTKTIALKKRIP 481

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLD 413
           VH +Y + W  +   +Q+RDDIY  D
Sbjct: 482 VHIIYQTVWY-EGGKLQYRDDIYRYD 506


>gi|157369969|ref|YP_001477958.1| hypothetical protein Spro_1726 [Serratia proteamaculans 568]
 gi|157321733|gb|ABV40830.1| Peptidoglycan-binding domain 1 protein [Serratia proteamaculans
           568]
          Length = 613

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 142/295 (48%), Gaps = 8/295 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            P       +   +   VK FQ   GL   G++   T E +NV   +R   L +N+ R++
Sbjct: 305 SPVTVTDNRYTPDLVEGVKRFQKWQGLSADGVIGVRTREWLNVTPQIRASLLALNIQRLR 364

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L         ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 365 ILPGHV--DTGIMVNIPNYSLTYYQNGNEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPW 422

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFR 299
            +P +++++D++    +D  Y + +   ++         +    +DW+   P    +  R
Sbjct: 423 NVPTTLVREDIVPKAMRDGSYFQKHGYTVLSGWSNDAEVINPAMIDWSMISPRNFPYRIR 482

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 483 QAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQD 542

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  D+
Sbjct: 543 A-GWNNTRVSSTLKQGNTTFVNIRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDD 596



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 6/122 (4%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +         S +   +    ++++N  +      +    +++  P   +   
Sbjct: 133 YLQFVSSIGANGNNWLYSNIPYKLGLPPNTVINQWQLALRQGKTLAYVNTLAPQHPQ--Y 190

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           A+  +A+     +     WP++   P L     S  +  LRE L  +G L PS       
Sbjct: 191 AKMHQALRDM--LADGRPWPQMANGPSLRPDQLSSDIPALREILARNGMLTPSTAPVEVQ 248

Query: 135 DA 136
           D 
Sbjct: 249 DP 250


>gi|89092899|ref|ZP_01165851.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
 gi|89082924|gb|EAR62144.1| hypothetical protein MED92_10574 [Oceanospirillum sp. MED92]
          Length = 411

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 101/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           P   ++ I   E+     + +     WP L   + L  G+ S  + +LR RL++ GDLD 
Sbjct: 49  PQGIEKQILALEEHKIRLEQLSLANQWPSLLKTKLLRFGDESTVIPKLRTRLMLLGDLDE 108

Query: 127 SKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
                     F   + +A+  FQ RHGL   G+   +T   +NV    R  Q+ VN+ R+
Sbjct: 109 LVHCELDDPLFGIDLHNALIKFQKRHGLKADGIYGPATRRELNVSPSSRALQITVNIDRL 168

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           K      +  RY+ VNIP   L   E+G   L    IVG+  R+TP+ ++ +NR++ NP 
Sbjct: 169 KSFNP--VSDRYIQVNIPEYRLRLFEHGAEILSMKTIVGKKKRKTPVFNTTVNRLVINPS 226

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNS-PEPPNF-IF 298
           W +P+SI  KD++  L  DP+YLK  N+ ++   G     +  ++VD +   +  N+  F
Sbjct: 227 WHVPKSIAYKDIVPELESDPEYLKKMNLKLVTGWGNSKTILSQDQVDLDKLYKGENYQRF 286

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            + P     + S K       + Y+HDT    LF    R  +SGC+RV     L   L++
Sbjct: 287 WEPPSNNGTLGSVKFLTTGPYSVYLHDTSAKRLFEKETRAFSSGCIRVEKPRSLANELMR 346

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            T  W +  ++      +   + +   + +H  Y +A+  ++  + FR D+Y  D   + 
Sbjct: 347 MTHGWEKEKLDTYFNDTERKTINMPDTIDLHVTYWTAFIDENG-LNFRRDLYKKDRWEIA 405

Query: 419 IIPLPE 424
            +   E
Sbjct: 406 QLKQTE 411


>gi|329298736|ref|ZP_08256072.1| murein L,D-transpeptidase [Plautia stali symbiont]
          Length = 590

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 8/294 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                +  +D+ +   VK FQ    L   G +   T E +NV   +R   L +N+ R++ 
Sbjct: 283 TPSASNNVYDSTLVEGVKRFQHWQELADDGAIGPRTREWLNVSPQMRAALLALNIQRLRL 342

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L +       ++VNIP  SL    NG   L S VIVGR DR+TP++ S +N ++ NP W 
Sbjct: 343 LPDDMHNG--IMVNIPNYSLTYYNNGNTILSSRVIVGRPDRKTPLMRSALNNVVLNPPWN 400

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEP--PNFIFRQ 300
           +P +++++D++  ++QDP YL  +   ++       + +    +DW+        +  RQ
Sbjct: 401 VPTTLVRQDIVPKVKQDPSYLYKHGYTLLSGWSADAEVIDPSVIDWHMVSAASFPYRIRQ 460

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    +L   LL+D 
Sbjct: 461 APGASNSLGRYKFNMPSSDAIYLHDTPNHGLFQRDIRALSSGCVRVNKASELADLLLQDA 520

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             W+   I + +K   T  V +   +PV+  Y++AW   D   Q+R DIY  DN
Sbjct: 521 -GWNDSRISDTLKQGDTRYVPIRHRIPVNLYYLTAWVADDGQPQYRTDIYNYDN 573



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 10/121 (8%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     +    +    S +   +     S      +  +   +R    + S  P   + 
Sbjct: 112 YLQFVANVPTQGETWLYSNVPYKLTMPSLSAINQWQNAVNGGGSR--AFVVSLQPQHPQ- 168

Query: 74  TIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             A    A+     +     WP+L     L  G  S  V  LRE L  +G L  +   + 
Sbjct: 169 -YAPMHSALKAL--LTDNRPWPQLRDKGTLRPGQISDDVPALREILQRTGMLTGTHSATP 225

Query: 133 A 133
            
Sbjct: 226 T 226


>gi|330809814|ref|YP_004354276.1| hypothetical protein PSEBR_a2969 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377922|gb|AEA69272.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 520

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 106/382 (27%), Positives = 173/382 (45%), Gaps = 14/382 (3%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKE-----TIAQTEKAIAFYQDILSRGGWPELPI 99
           +    D     LA   +G+ +      +               A  +       W  +P 
Sbjct: 141 NPPPQDHQAVVLAIAGVGLQNVASAFEQARPNLDLYRNLRGLYARLRQQPLS-DWQPVPG 199

Query: 100 RPL-HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            PL         V  L +RL   G L  P       +   +  A+K FQ++H L   G+V
Sbjct: 200 GPLLQPDKQDARVPALAQRLFNEGYLSTPPLVTDEHYSPTLVEAMKSFQLQHSLQADGVV 259

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T+  +N+   +R  QL++NL R++ L  Q +    VLVN+ AA L     G+   ++
Sbjct: 260 GPWTVTELNISPAMRREQLRINLERMRWL-AQDVENDSVLVNVAAAQLTVYRGGEPIWQT 318

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
              VGR  RQTP+L S + R+  NP W IP +I+++D +  +R+DP++L  +N+ ++D +
Sbjct: 319 RTQVGRAQRQTPLLKSHVTRLTLNPTWTIPPTIMREDKLPEIRRDPEFLARHNLRILDSE 378

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G  +  E++DW    P N + RQDPG  N +    I F +  + Y+HDTP   LF+   R
Sbjct: 379 GLPLMAEDIDWE--HPGNLMLRQDPGPKNPLGKMAIRFPNPFSVYLHDTPSQALFSKGPR 436

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGCVR+  ++ L   L+       R   + ++ +  T   +LA  VP+   Y +A +
Sbjct: 437 AFSSGCVRIEQVMHLRDLLVSPAE---RARTDTLLASETTHEFRLARPVPILLGYWTAQA 493

Query: 398 PKDSIIQFRDDIYGLDNVHVGI 419
                  +  DIY  D      
Sbjct: 494 DSQGQPLYIPDIYARDATLSAA 515


>gi|299136140|ref|ZP_07029324.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
 gi|298602264|gb|EFI58418.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX8]
          Length = 604

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 107/400 (26%), Positives = 186/400 (46%), Gaps = 30/400 (7%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL---SRGGWPELP------IRPLHL 104
              A V   I +  P          +K +A Y ++    +    P LP       + +  
Sbjct: 197 ADSADVSGAIATVEPQ--NAMYVALQKGLAQYLELAKQQAANPQPPLPSLGATGAKSIVQ 254

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---------SVAFDAYVESAVKLFQMRHGLDPSG 155
           G S  ++ +L  RL + GD+  +              +++A + +AVK +Q RHGL   G
Sbjct: 255 GGSYAALPQLLARLQLEGDVTATDTDTAAASDTAGPRSYNAELVAAVKHYQQRHGLTADG 314

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVG 214
            +  ST++++NVP+++R++QL  +L R + + +  +  R VLVN+P   + A + +  V 
Sbjct: 315 KLTQSTIDSLNVPMEVRVQQLNNSLERWRWMPDNFINPR-VLVNLPEFVVRAYDPDHSVA 373

Query: 215 LRSTVIVG--RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD-PQYLKDNNI 271
            +  ++ G  + +  TP+    +  ++F PYW +P SII+K+++  +++    YL D   
Sbjct: 374 FKMKIVDGEAKGNHDTPMFVRSMRYVVFRPYWNVPPSIIKKELLPHIQRSGIGYLADKGY 433

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +    G  V       +  E   +I RQ PG  N++   K  F +  + YMH TPE  L
Sbjct: 434 EVARNDGTVVTGYTA--HDIEHLRYIVRQKPGPKNSLGLVKFLFPNEYDVYMHSTPELPL 491

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVHF 390
           FN   R  + GCVR+ +   +  W+L+    W    I E +   K    V L T +PV  
Sbjct: 492 FNLTRRDRSHGCVRLEHADQMAAWVLQGQGDWDEDKISEAMNGDKDNKTVNLKTTLPVII 551

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
            Y +A + +D+ I F  D+YG D      +   +  P +S
Sbjct: 552 GYFTATADEDNSIHFFSDLYGYDKALEAALD--KGMPYES 589


>gi|327189298|gb|EGE56466.1| hypothetical protein RHECNPAF_642003 [Rhizobium etli CNPAF512]
          Length = 653

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 103/414 (24%), Positives = 173/414 (41%), Gaps = 29/414 (7%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L      V   I  + +    +   +  +     +           + S  P   +   
Sbjct: 234 VLAFVQDTVRGRIDPNKISGYHDFQRKVVNLAPVLKLARMSPDAGAYLTSRSPDGPQ--F 291

Query: 76  AQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGD--------- 123
              +  +A  +     G   ++     + L  G+SS  V  + + L   G          
Sbjct: 292 EALKAELAKLRA-ADGGNEEQIVISLDKLLRPGDSSPEVANIVKALAKHGSETLKTNHAA 350

Query: 124 -LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNL 180
            L    G S  +   + + V+ FQ   GL   G++  +T+ AM        +I +L V +
Sbjct: 351 TLASYTGGSD-YSPEIVALVEDFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLVVAM 409

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            + + L  + +G RYV++N PA       +GK  L   V+VG  + QT      I  + F
Sbjct: 410 EQARWLP-EDLGSRYVMINQPAYMAYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEF 468

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP+W +P+SII  +M+  LR DP YL      + +  G  V    VDW      N   RQ
Sbjct: 469 NPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVASSSVDWYGST-DNVSVRQ 526

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   NA+   KI F + +  YMHDTP    F   +R  + GCVR+ N   +   +L  T
Sbjct: 527 PPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLSNPRAMAAAVLGTT 586

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                  + + + + +   V++  ++PV+  Y +AW  KD ++++ DD+YG D 
Sbjct: 587 VDD----VAKQIASGQNHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDA 636


>gi|46202780|ref|ZP_00052619.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 465

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 104/359 (28%), Positives = 164/359 (45%), Gaps = 7/359 (1%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L  G  L    +  +              +             +   I +IS +     
Sbjct: 104 LLRFGRDLSVGAVLPARNLGGFGAETRGEFDGARFLKALAEGKPLTEQIDVISPQYVGYM 163

Query: 77  QTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +    +   + I + GGWP +P    L  G++   V  LR RLI SGDL         +D
Sbjct: 164 RLRDGLEKARAIAAAGGWPSIPDGAKLVPGDTDDRVPVLRRRLIASGDLGDGLAEGRTYD 223

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A +  AVK FQ+RHGL+P   +   TL  +NVP D R RQ+ VN+ R + +     G  +
Sbjct: 224 APLAEAVKRFQLRHGLEPDATIGGKTLAHLNVPADARARQIAVNMERWRWMP-HSFGRHH 282

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNI A  +E VE+G V +   V+VG V   TP + + ++ ++ NP W +P SI  K++
Sbjct: 283 IAVNIAAQQMEVVEDGAVAMSMRVVVGDVKHPTPSMSTTMSSVVLNPAWRVPTSIANKEI 342

Query: 256 MALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTK 312
           +  LR+DP YL  + + ++D      E   + VDWN+  +   +  RQ PG  NA+   K
Sbjct: 343 LPKLRKDPNYLTSSKLQIVDYPEGSPESAGDGVDWNAIGKKFPYRLRQPPGPDNALGQLK 402

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
                 ++ YMHDT    +     R  + GCVR+   ++L   +L      +   IE +
Sbjct: 403 FNLTDSDDIYMHDTNNRRVXGRSYRALSHGCVRLERPVELGDVMLGPRRKDNWRKIEAI 461


>gi|157375588|ref|YP_001474188.1| peptidoglycan binding domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157317962|gb|ABV37060.1| peptidoglycan-binding domain 1 protein [Shewanella sediminis
           HAW-EB3]
          Length = 465

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 101/360 (28%), Positives = 172/360 (47%), Gaps = 6/360 (1%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW-PELPIRPLHLGNSSVSVQRLRE 116
            +     S  P  S          + +   +     W P +    L  G+   S+  +  
Sbjct: 99  DLYQRAISLEPTSSD--YLPVSNRLRYLLWLSEHYPWKPLVIGGWLKEGDYHKSIPEISF 156

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RL + GDLD     +   +  + +++  FQ RHGL    ++   TL  +N     R R L
Sbjct: 157 RLNMLGDLDSYDRNNKQLNRTLATSLLRFQRRHGLKQDAIIGPETLRWLNASPKNRARLL 216

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
             N ++    L   +  R++L+NIPA  +  V++ ++ L+S VIVG+  RQTP+L S+I+
Sbjct: 217 ANNFLKKSSYLA-SLDSRFLLINIPAFEMVLVDHDEIQLKSRVIVGKPYRQTPMLSSQIS 275

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
            ++ NP W +PR ++ +D++  +R++  Y+   N  + D KG  +     +W       F
Sbjct: 276 NVVLNPSWRVPRRLLWRDLLPKVRENGSYITQRNFDVFDAKGVIIEKSPDEWQELAQGRF 335

Query: 297 IFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
            +R  Q PG+ N +   K  F +  N Y+HDT +  LF    R  +SGC+RV N+  L  
Sbjct: 336 PYRLVQRPGEENTLGRYKFYFANDYNVYLHDTVDKSLFEESNRALSSGCIRVENVESLAN 395

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           W+  +     +  ++  V+ +KT    L   + VH VY +AW   +   QFR+DIY  ++
Sbjct: 396 WMASNLVRDKQTWVDMQVERQKTQWFSLDDSLAVHLVYWTAWIDSEGDSQFRNDIYNQNS 455


>gi|261211004|ref|ZP_05925294.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
 gi|260839979|gb|EEX66579.1| hypothetical protein VCJ_001260 [Vibrio sp. RC341]
          Length = 522

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 99/391 (25%), Positives = 181/391 (46%), Gaps = 20/391 (5%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
            ++           +    +A     +   I   S +  A  ++ +  YQ +L+     +
Sbjct: 132 GQLNKPLAAPSEEAQLALHMAIGSQTLVQLIDEYSPKDPAY-QQLLHTYQFLLATES-HD 189

Query: 97  LP----IRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P          G+S      L  RL +   D+   +     +D  +  A+K FQ  HGL
Sbjct: 190 IPLYEQTGLKREGDSLTHRDALLRRLSLVNLDITDVREDVAFYDQSLVKAIKQFQSMHGL 249

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G++   T++ +N  V  R+  L +N  R++    Q      ++VN+P   ++  + G
Sbjct: 250 KTDGVIGPETIKWLNKSVTERVTLLALNAERLRLW--QTPQDTVIVVNVPGFDMKYWDAG 307

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +    + V+VGRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D QYL ++ I
Sbjct: 308 REVFEAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDHQYLAEHQI 367

Query: 272 HMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
            +I      + V  +E+DW + +P    +  RQ  G  NA+   K    +    Y+HDTP
Sbjct: 368 EIIRGWSDPEVVDPQEIDWATVDPETFPYRLRQQAGVQNALGMYKFNTPNSRAIYLHDTP 427

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
              LFNN  R  +SGC+RV N       LL       +  I        T  + L   +P
Sbjct: 428 SKHLFNNAARAFSSGCIRVENAQKFAQALL------DQQGIVLNDVPDTTKTIALKKRIP 481

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           V  +Y + W  +  ++ +RDDIY  D++ +G
Sbjct: 482 VQIIYQTVWY-EGGVLNYRDDIYRYDSLALG 511


>gi|294141900|ref|YP_003557878.1| hypothetical protein SVI_3129 [Shewanella violacea DSS12]
 gi|293328369|dbj|BAJ03100.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 615

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 97/461 (21%), Positives = 194/461 (42%), Gaps = 62/461 (13%)

Query: 19  ILPMGLSLVEKPIHASVL------DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK 72
           ++     L+   ++ S L      DE I +    +           V   + S  P +  
Sbjct: 144 VITYATHLINGKVNPSTLEKTWNYDESIIKLDTIVAELNRHVDQRDVAQRLLSLSPQLDA 203

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               Q + A+  Y+ +     +P +  + L   G+ + ++  + +RLI    L P   +S
Sbjct: 204 --YTQLKSALKKYRLLADTADFPNIKYQGLIKAGSVTPTLALIADRLIQLNYLSPQADIS 261

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +      AV+ +Q  H L   G++   T+ ++NVP   R  Q+++N+ R + L    +
Sbjct: 262 N-YSHEFVGAVRAYQSSHSLQADGIIGKGTINSLNVPFAYRADQIRINMERARWLSS-DL 319

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              Y+++N+    L   ++G++  ++ +++G++  +TPI  SRI+ ++ NP W +PRSI 
Sbjct: 320 SQEYIIINLAGYELWMYKDGQLDWQTDIVIGKISSKTPIFKSRISYLVVNPTWTVPRSI- 378

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMA 309
              ++  +++DP Y+   +  + D  GK+V +  +DW   +P    + F Q P K NA+ 
Sbjct: 379 NPGLINKIKRDPSYIDKQHYMLKDSSGKKVDILAIDWQEVDPEKFKYWFVQKPWKNNALG 438

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-- 367
             K  F +R+  Y+HDTP   LF+   R  + GC+R++N ++L   LL +    +     
Sbjct: 439 QVKFIFPNRDAIYLHDTPTKYLFSLTDRAFSHGCIRIKNPLELAEKLLNENRPATLEKNL 498

Query: 368 ---------------------------------------------IEEVVKTRKTTPVKL 382
                                                        +++     +T  + L
Sbjct: 499 QIQNNKLAKRREESQLNNLSTDQVSVAPRSEPLQSPLTQPSADELLKKTFALGETQKLYL 558

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
              + +  +Y +A +     + F  D+Y  D   +  +  P
Sbjct: 559 DEPMDILIMYWTA-ASSKGKLTFYHDVYKRDEPLMLQLKRP 598


>gi|89074934|ref|ZP_01161384.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89049331|gb|EAR54894.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 587

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 20/352 (5%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA- 136
           T  AIA YQ++ +         +    G +  +   L + L   GD+D +      +D  
Sbjct: 222 TMDAIAKYQNLPAHTLVKSNFKQAYRKGATLPNGHELIKVLYTLGDMDQAD-----YDRL 276

Query: 137 ----------YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                      V  ++K FQ RHGL   G++ ++T++ + +P     R+L +N +R+  L
Sbjct: 277 SVEPNITNTGAVFESLKTFQKRHGLANDGIIGAATVQQLVMPYGDIARRLALNKLRVATL 336

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +   G  ++ VNIP   LE  + G V   S VIVGR +R T +  S I  ++ NPYW +
Sbjct: 337 NKHTEGRPHIWVNIPNYKLEVFDKGNVVFESKVIVGRDNRPTNLFSSAITTMVVNPYWNV 396

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFI--FRQDP 302
           P +I Q D++  ++ D  YLK +N+ +++       +    ++W +  P  F   F+Q P
Sbjct: 397 PITIKQHDVIPKVKHDIDYLKQHNMQILNSWRDRTVISPSSINWETVNPKTFPHEFQQGP 456

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++++    
Sbjct: 457 GPRNSLGRVKFLMPNDYAIFLHDTPSRGLFSKNKRDLSSGCVRVERAYDLANYVIEYQNR 516

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +    ++++  +K   V L+  + V FVY++AW   D  +Q R+DIYG D+
Sbjct: 517 GNIPKFKQMLDAQKQKTVSLSKRIDVDFVYLTAWVDHDGNVQMREDIYGYDS 568


>gi|86357997|ref|YP_469889.1| hypothetical protein RHE_CH02382 [Rhizobium etli CFN 42]
 gi|86282099|gb|ABC91162.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 633

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 104/411 (25%), Positives = 171/411 (41%), Gaps = 24/411 (5%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L      V   I  + +    +   +  +     +           I S  P   +   
Sbjct: 215 VLAFVQDTVRGRIDPNKISGYHDFQRKVVNLAPVLKLARMSPNAGAYIASRSPDSPQ--F 272

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---- 130
              +  +A  +   S      +     L  G SS  +  + + L   G            
Sbjct: 273 EALKAELAKLRAADSNEEQIVISLQGLLKPGESSSEIANIVKALQKHGSETLKTDHAATF 332

Query: 131 -----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRI 183
                S  +   + S V+ FQ  HGL P G++  +T+ AM        +I +L V + ++
Sbjct: 333 AAYAGSSDYSPDIVSLVEDFQKEHGLKPDGVIGQATVRAMTGGDTNTSKIDKLVVAMEQV 392

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + L  + +G RYV++N PA       +GK  L   V+VG  + QT   +  I  + FNP+
Sbjct: 393 RWLP-EDLGSRYVMINQPAYMAYYHNDGKEQLSMRVVVGGKNNQTYFFNDEIETVEFNPF 451

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P+SII  +M+  LR DP YL      + +  G  V    VDW      N   RQ P 
Sbjct: 452 WGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVASSSVDWYGSTA-NVSVRQPPS 509

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   KI F + +  YMHDTP    F   +R  + GCVR+ N   +   +L      
Sbjct: 510 SDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLANPRAMAAAVL----GT 565

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +   +   + + +   VK+  ++PV+  Y +AW  KD ++++ DD+YG D 
Sbjct: 566 TADDVARQIASGQNHAVKVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDA 616


>gi|218709906|ref|YP_002417527.1| hypothetical protein VS_1919 [Vibrio splendidus LGP32]
 gi|218322925|emb|CAV19102.1| conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 518

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 99/370 (26%), Positives = 167/370 (45%), Gaps = 31/370 (8%)

Query: 59  VDMGIDSDIPIIS-----KETIAQTEKA----IAFYQDILSRGGWPELPIRPLHLGNSSV 109
           +   + S  P +      K T +  E A    I  Y+                 LG+   
Sbjct: 163 LLEMVLSYAPPVGDFDQFKATYSVLETASELNIERYRQ-----------KGLKRLGDPLS 211

Query: 110 SVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               L ER+ + G D          FD  +++A+K FQ  HGL   G+V   T++ +N+ 
Sbjct: 212 DKPILVERIALVGVDTSMIAVDFPVFDQDLQTAIKSFQRMHGLTDDGIVGPDTIKWINMS 271

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            D R+  L +N  R++     +     ++VN+P+  ++  E+G+    S V+VGR  R+T
Sbjct: 272 FDERLTSLALNAERVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKT 329

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEV 286
           P+L   ++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID     + V   ++
Sbjct: 330 PLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRTMETVDTTDI 389

Query: 287 DWNSPE--PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           DW +       +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+
Sbjct: 390 DWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCI 449

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV +  +L   L             ++      T V+L   +PVH +Y +    +   IQ
Sbjct: 450 RVEHAEELAELLFATKVRKVPNQSNDLAP---NTKVRLKKRIPVHIIYQTVLFEEGG-IQ 505

Query: 405 FRDDIYGLDN 414
           +R DIY  D 
Sbjct: 506 YRGDIYQYDK 515


>gi|312113144|ref|YP_004010740.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311218273|gb|ADP69641.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 725

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 38/390 (9%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLI 119
            +    P    E   +  +A+         G     +P       G+    +  +R+RL 
Sbjct: 279 YLRGLHP--KSEQFKRLRQALIALGKTTDSGTSSIRIPAGKTFKPGDDDAQIALIRKRLN 336

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV----PVDLRIRQ 175
                         +D  +  AV  FQ   GL+ +G+VD     A+N      VD +  +
Sbjct: 337 A----GLDAPRDTIYDEALLVAVNRFQKERGLNVNGIVDKKLRAALNEGAGGSVDEKKMR 392

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L VN+ R + +    +G  YV  +IP  +    + G+V  +  ++VG+   QTP   +++
Sbjct: 393 LIVNMERWRWMP-DDLGEFYVWNSIPEQTTRVFDRGRVAFQERIVVGKPTSQTPSFSAKM 451

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQ-------------------------DPQYLKDNN 270
             ++FNP W +P  I   ++   LR+                             L+   
Sbjct: 452 QFVIFNPEWGVPDGIKANEIAPKLRRAAPSGPSDDLFSFLGGRSGGGGGGGASSVLQRLG 511

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
              +   G++V  + VDW+  +   + F Q  G  NA+   K  F ++++ YMHDTPE  
Sbjct: 512 GLRVTYNGRDVDPDSVDWSRVDARRYSFIQPAGPRNALGVVKFRFPNKHDVYMHDTPEKS 571

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           LF +  R  + GC+R +N +     +L      +   I   +++ +TT  KL   +PVH 
Sbjct: 572 LFGSATRAFSHGCMRTQNPVRFAEVILAYDNGTTPEQIRRQIESGQTTENKLTKTIPVHM 631

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           VY +A   +   I++  D+YGLD      +
Sbjct: 632 VYFTAAPDEKGDIRYFSDLYGLDARVASAL 661


>gi|91975886|ref|YP_568545.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gi|91682342|gb|ABE38644.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
          Length = 716

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 107/434 (24%), Positives = 174/434 (40%), Gaps = 45/434 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS--IVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           ++          +H S     I    H         +   A      +DS  P       
Sbjct: 245 MMDYARQAQSGRMHWSQAGSDIQYPEHPIDPAEVLANVTTAKDASAALDSYNPPHKP--Y 302

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLG--NSSVSVQRLRERLIISGDLD 125
            + +K +A  +         I        +P R            V +LR +L I+ D  
Sbjct: 303 RELKKKLAELRGESGMPVLKIAEGETLKFVPARKKQPAVTMDDPRVPQLRAKLGITED-- 360

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
                S  +DA V  AV+ FQ    L P+G++D  T++ +N P   R I  + VN+ R +
Sbjct: 361 ---ADSSTYDAKVAEAVRKFQRSADLKPTGVLDDRTVKVLNTPKRDRSIDTIIVNMERWR 417

Query: 185 KLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIM 239
            L  Q     +G  YV++NIP  +L+ ++NG     + V+ G+     TP+L   +  I 
Sbjct: 418 WLPRQLGAASIGNAYVILNIPDYTLKVMQNGAQVWTTRVVTGKPGKHATPLLTETMKYIT 477

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W +P SII  + +  L QDP  L    + M   +                 +    
Sbjct: 478 VNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRD---------------GSIHIS 522

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK- 358
           Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL  
Sbjct: 523 QPPGEANALGRVRFNFPNKFLVYQHDTPDKNLFARDERAFSHGCMRVQNPDQYAAALLNI 582

Query: 359 --DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
                 ++   I   +  R    +K  T +PV+  Y +A+   D  +Q R DIYG D+  
Sbjct: 583 TMPNERYTPEKIRS-MYGRSEIDLKFPTPIPVNITYQTAFVDDDGKLQIRKDIYGRDSAM 641

Query: 417 VGIIPLPEDHPIDS 430
           + I+   +   +++
Sbjct: 642 LAILRNDKGKNLEA 655


>gi|148978885|ref|ZP_01815205.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
 gi|145962083|gb|EDK27369.1| hypothetical protein VSWAT3_22280 [Vibrionales bacterium SWAT-3]
          Length = 519

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 31/370 (8%)

Query: 59  VDMGIDSDIPIIS-----KETIAQTEKA----IAFYQDILSRGGWPELPIRPLHLGNSSV 109
           +   + S  P +      K T +    A    I  Y+                 LG+   
Sbjct: 164 LLEMVLSYAPPVGDFDQFKATYSVLNTASELGIERYRQ-----------KGLKRLGDKLS 212

Query: 110 SVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               L ER+ + G D       S  FD  ++ A K FQ  HG+   G++   T++ +N+ 
Sbjct: 213 DKATLVERIALVGVDTSMIAVDSPRFDRDLQIATKAFQRMHGITADGIIGPDTIKWINMG 272

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            D R+  L +N  R +     +     ++VN+P+  ++  E+G+    S V+VGR  R+T
Sbjct: 273 FDDRLTSLALNAERARLWPRNR--DSLIVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKT 330

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEV 286
           P+L  +++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID       V   E+
Sbjct: 331 PLLEIKLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRSMETVDTTEI 390

Query: 287 DWNSPE--PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           DW +       +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+
Sbjct: 391 DWQTINFNSFPYRMRQQAGSSNALGLYKFNTPNKRAIYLHDTPSKSLFNDDFRAYSSGCI 450

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV +  +L   L            +++      T V+L   +PVH +Y +    ++  IQ
Sbjct: 451 RVEHAEELAELLFATKVKKVPNQSDDLAP---NTKVRLKKRIPVHIIYQTVLFGEEG-IQ 506

Query: 405 FRDDIYGLDN 414
           +R DIY  D 
Sbjct: 507 YRGDIYQYDK 516


>gi|84393105|ref|ZP_00991870.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
 gi|84376262|gb|EAP93145.1| Uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
          Length = 512

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 107/417 (25%), Positives = 179/417 (42%), Gaps = 33/417 (7%)

Query: 14  FFVYLILPMGLSLVEKPIHA-SVLDEIINESY-HSIVNDRFDNFLARVDMGIDSDIPIIS 71
           F  YL       L  K  +    L   +     H ++  +       +   + S  P + 
Sbjct: 110 FIYYLSYVENAPLAGKEWYFSGKLHSKLPAPSPHILMRLKSSVANDYLLEMVLSYAPPVG 169

Query: 72  -----KETIAQTEKA----IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
                K T +  E A    I  Y+                 LG+       L ER+ + G
Sbjct: 170 DFNQFKATYSVLETASELNIERYRQ-----------KGLKRLGDELSDKAVLVERIALVG 218

Query: 123 -DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
            D          FD  +++A+K FQ  HGL   G+V   T++ +N+  D R+  L +N  
Sbjct: 219 VDTSMIAVDFPEFDRDLQTAIKSFQRMHGLTDDGIVGPDTIKWINMSFDDRLTSLALNAE 278

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++     +     ++VN+P+  ++  E+G+    S V+VGR  R+TP+L   ++ ++ N
Sbjct: 279 RVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKTPLLEINLDSVILN 336

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPE--PPNFI 297
           P W +P  I+ KD++  ++ D  YL  +N  +ID     + V   E+DW +       + 
Sbjct: 337 PTWNVPWKIMVKDILPKVKADESYLDTHNFQVIDGWRTMETVDTTEIDWQTINFNSFPYR 396

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+RV +  +L   L 
Sbjct: 397 MRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCIRVEHAEELAELLF 456

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                      +++      T V+L   +PVH +Y +    +   IQ+R DIY  D 
Sbjct: 457 ATKVRKVPNQSDDLAP---NTKVRLKKRIPVHIIYQTVLFEEGG-IQYRGDIYQYDK 509


>gi|86148447|ref|ZP_01066737.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
 gi|85833744|gb|EAQ51912.1| Uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
          Length = 512

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 167/370 (45%), Gaps = 31/370 (8%)

Query: 59  VDMGIDSDIPIIS-----KETIAQTEKA----IAFYQDILSRGGWPELPIRPLHLGNSSV 109
           +   + S  P +      K T +  E A    I  Y+                 LG+   
Sbjct: 157 LLEMVLSYAPPVGDFDQFKATYSVLETASELNIERYRQ-----------KGLKRLGDELS 205

Query: 110 SVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               L ER+ + G D          FD  ++SA+K FQ  HGL   G+V   T++ +N+ 
Sbjct: 206 DKTILVERIALVGVDTSMIAVDFPVFDQDLQSAIKSFQRMHGLTDDGIVGPDTIKWINMS 265

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            D R+  L +N  R++     +     ++VN+P+  ++  E+G+    S V+VGR  R+T
Sbjct: 266 FDERLTSLALNAERVRLWPRDR--DSLIVVNVPSFDMKYWEDGEEVFESKVVVGRKSRKT 323

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEV 286
           P+L   ++ ++ NP W +P  I+ KD++  ++ D  YL+ +N  +ID     + V   ++
Sbjct: 324 PLLEINLDSVILNPTWNVPWKIMVKDILPKVKADESYLETHNFQVIDGWRTMETVDTTDI 383

Query: 287 DWNSPE--PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
           DW +       +  RQ  G  NA+   K    ++   Y+HDTP   LFN+  R  +SGC+
Sbjct: 384 DWQTINFNSFPYRMRQQAGSRNALGLYKFNTPNKRAIYLHDTPSKGLFNDDFRAYSSGCI 443

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           RV +  +L   L             ++      T V+L   +PVH +Y +    +   IQ
Sbjct: 444 RVEHAEELAELLFATKVRKVPNQSNDLAP---NTKVRLKKRIPVHIIYQTVLFEEGG-IQ 499

Query: 405 FRDDIYGLDN 414
           +R DIY  D 
Sbjct: 500 YRGDIYQYDK 509


>gi|293396754|ref|ZP_06641030.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291421018|gb|EFE94271.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 572

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 8/295 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +      + + +   VK FQ   GL   G++   T E +NV   +R   L +N+ R++
Sbjct: 264 AAASMADNLYSSELVEGVKRFQKWQGLSTDGIIGVRTREWLNVSPQMRASLLALNIQRLR 323

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  +      ++VNIP  SL   +NG   L S VIVGR  R+TP++ S +N ++ NP W
Sbjct: 324 ILPGRVSNG--IMVNIPNYSLVYYQNGNEVLSSRVIVGRPSRKTPMMSSALNNVVVNPPW 381

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWNSPEP--PNFIFR 299
            +P +++++D++    +D  Y + +   ++         +    +DWN        +  R
Sbjct: 382 NVPTTLVREDIVPKAMRDANYFRKHGYTVLSGWSNDAEVIDPSMIDWNMVSARNFPYRIR 441

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   LL+D
Sbjct: 442 QAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLLQD 501

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              W+   +   +K   TT V +   +PV   Y++AW   D   QFR DIY  DN
Sbjct: 502 A-GWNNSRVSSTLKQGNTTYVNVRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDN 555



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     +         S +   +     +++N  +      +    ++S  P   +   
Sbjct: 92  YLQFVSSIGANGNNWLYSNIPYKLATPPGTVINQWQLAVRQGKAQAYVESLAPQHPQ--Y 149

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           A+  +A+     +     WP L   P L  G  S  +  LRE L  +G +      S
Sbjct: 150 AKMHQALRDM--LADSRPWPRLANGPSLRPGEISNDIPALREILQRTGMMSDIPAAS 204


>gi|209549608|ref|YP_002281525.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535364|gb|ACI55299.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 636

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 102/377 (27%), Positives = 165/377 (43%), Gaps = 24/377 (6%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSV 109
                  V   I S  P  ++      +  +A  + +        +    + L  G+SS 
Sbjct: 253 LARMSPDVGAYIASRSPDGAQ--FEALKAELAKLRAVDGGNEERIVVSLDKSLKPGDSSP 310

Query: 110 SVQRLRERLIISGD----------LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            +  + + +   G           L    G S  +   + S V+ FQ   GL   G++  
Sbjct: 311 EIANIVKAIGKHGSETLKTDHAATLAAYAG-STDYSPDIVSLVEAFQQERGLKADGVIGQ 369

Query: 160 STLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +T+ AM        +I +L V + + + L  + +G RYV++N PA  +    +GK  L  
Sbjct: 370 ATVRAMTGGDTNASKIDKLVVAMEQARWLP-EDLGSRYVMINQPAFMVYYHNDGKEQLSM 428

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VG  + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  
Sbjct: 429 RVVVGGKNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVN 487

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R
Sbjct: 488 GHAVASSSVDWYGSTN-NVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMR 546

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             + GCVR+ N   +   +L  T       + + + T +   VK+  ++PV+  Y +AW 
Sbjct: 547 ALSHGCVRLANPRAMAAAVLGTTVDD----VAKQIATGQNHAVKVPQKIPVYVSYFTAWP 602

Query: 398 PKDSIIQFRDDIYGLDN 414
            KD ++++ DD+YG D 
Sbjct: 603 NKDGVVEYFDDVYGRDG 619


>gi|190892061|ref|YP_001978603.1| hypothetical protein RHECIAT_CH0002473 [Rhizobium etli CIAT 652]
 gi|190697340|gb|ACE91425.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 636

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 101/414 (24%), Positives = 172/414 (41%), Gaps = 29/414 (7%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L      V   I  + +    +   +  +     +           + S  P   +   
Sbjct: 217 VLAFVQDTVRGRIDPNKISGYHDFQRKVVNLAPVLKLARMSPDAGAYLTSRSPDGPQ--F 274

Query: 76  AQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGD--------- 123
              +  +A  +     G   ++     + L  G+SS  V  + + L   G          
Sbjct: 275 EALKAELAKLRA-ADGGNEEQIVISLDKLLRPGDSSPEVANIVKALAKHGSETLKTNHAA 333

Query: 124 -LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNL 180
            L    G    +   + + V+ FQ   GL   G++  +T+ AM        +I +L V +
Sbjct: 334 TLASYAGGRD-YSPEIVALVEDFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLVVAM 392

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            + + L  + +G RYV++N PA       +GK  L   V+VG  + QT      I  + F
Sbjct: 393 EQARWLP-EDLGSRYVMINQPAYMAYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEF 451

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP+W +P+SII  +M+  LR DP YL      + +  G  V    VDW      N   RQ
Sbjct: 452 NPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVASSSVDWYGST-DNVSVRQ 509

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            P   NA+   KI F + +  YMHDTP    F   +R  + GCVR+ N   +   +L  T
Sbjct: 510 PPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLSNPRAMAAAVLGTT 569

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                  + + + + +   V++  ++PV+  Y +AW  K+ ++++ DD+YG D 
Sbjct: 570 VDD----VAKQIASGQNHAVRVPQKIPVYVSYFTAWPNKEGVVEYFDDVYGRDA 619


>gi|92116782|ref|YP_576511.1| peptidoglycan binding domain-containing protein [Nitrobacter
           hamburgensis X14]
 gi|91799676|gb|ABE62051.1| Peptidoglycan-binding domain 1 [Nitrobacter hamburgensis X14]
          Length = 775

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 177/429 (41%), Gaps = 41/429 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLA--RVDMGIDSDIPIISKETI 75
           ++          +H S +   I    H         N          +DS  P   ++  
Sbjct: 308 MMNYARQAQSGRMHWSQVGADIQYPEHPIDPEQVLTNVTTAKDASAALDSYNP--PQKLY 365

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP---LHLG--NSSVSVQRLRERLIISGDLDPSKGL 130
            + ++ +A  +   S G   E+   P              V ++R +L ++         
Sbjct: 366 RELKQKLAELRK-TSEGPVVEIAEGPSLVFRKNAVMEDPRVPQIRAKLGVT-----QNPD 419

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKKLLEQ 189
              FDA V +AV+ FQ R+ L P G+  ++T+ A+N P    +I  + VN+ R + L  +
Sbjct: 420 DAHFDADVAAAVREFQTRNHLQPDGIAGNNTIRALNGPRKGHQIDTIIVNMERWRWLPRE 479

Query: 190 ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFNPYW 244
                +G  Y ++NIP  +L+ +++G     + V+VG+     TP+L   +  I  NP W
Sbjct: 480 LGAPSLGNAYAILNIPDYTLKVMQHGAQLWSTRVVVGKPGIHATPLLTETMKYITVNPTW 539

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P SII K+ +  L+QDP  L+   + +                          Q PG 
Sbjct: 540 NVPPSIIYKEYLPALQQDPTVLERMGLKL---------------ERDRNGGIHISQPPGD 584

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTP 361
            NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL       
Sbjct: 585 RNALGRIRFNFPNKFLVYQHDTPDKYLFAKEKRAFSHGCMRVQNPDQYAATLLNIALPQE 644

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            ++   I   +  RK   +K  T +PV+  Y +A+      +Q R D+YG D   + ++ 
Sbjct: 645 HYTPEKIRG-MYGRKEFDIKFPTPIPVNITYQTAFVDHAGKLQIRPDVYGSDAKMLALLR 703

Query: 422 LPEDHPIDS 430
            P+   +++
Sbjct: 704 NPKGRDLEA 712


>gi|146300086|ref|YP_001194677.1| hypothetical protein Fjoh_2331 [Flavobacterium johnsoniae UW101]
 gi|146154504|gb|ABQ05358.1| Uncharacterized protein [Flavobacterium johnsoniae UW101]
          Length = 519

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 181/345 (52%), Gaps = 26/345 (7%)

Query: 75  IAQTEKAIAFYQDILSRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
             + +  +  Y+ +     W  +    P + L     S ++ ++R RL + GDL      
Sbjct: 185 YYKLQGVLKQYKKLEKSSKWKPIVAETPYKDLRPDAVSPTIAQVRTRLYLLGDLKQDSK- 243

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  +D  +   V  +++R+G  P+ ++    ++ MN+PV  +++ L +N+ RI+ +  + 
Sbjct: 244 SDFYDRELMDGVMKYKVRNGFKPNYILAEEHIKEMNIPVSDKVKTLMLNMERIRAISPEL 303

Query: 191 MG-LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           +    YVLVN+P+  L  V+NGK+ L S+V VG    +T I + +I+RI+F+PYW +P+S
Sbjct: 304 VNNDEYVLVNVPSYELIYVKNGKIELTSSVFVGSPLTKTTIFNGQIDRIVFSPYWTVPQS 363

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I+Q ++ + +  DP YL + N+ M++ +                     RQ PG  N++ 
Sbjct: 364 IVQNELRSKIAADPNYLAEKNMEMVNGQ--------------------VRQKPGPDNSLG 403

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             K  F + ++ YMHDTP   LF+   R  + GC+ V+   +L V +LKD P W++  I+
Sbjct: 404 LVKFMFPNSDDIYMHDTPSKTLFDFEKRTFSHGCINVKMAKELAVAMLKDYPEWTQAKID 463

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           + ++ +  +  KL+ +VP++  Y ++   ++  I F  D+Y  D 
Sbjct: 464 KAMEGKVESSFKLSKKVPIYITYFTSLVNENGQIGFFQDVYEKDA 508


>gi|260768291|ref|ZP_05877225.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
 gi|260616321|gb|EEX41506.1| hypothetical protein VFA_001342 [Vibrio furnissii CIP 102972]
          Length = 517

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 12/382 (3%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSRGGWPELP 98
           +         R    +A    GI   I   + +     Q   A  +   I  +     + 
Sbjct: 136 HSLPLPSEQARLALHIAVGIHGITDLIDEYTPQDAAYRQLVNAYRYLSQIEPQMLSVYVQ 195

Query: 99  IRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            R    G+     + L +RL +   D+         +D  +   VK FQ  HGL   G++
Sbjct: 196 ARLKRPGDKLEDRRTLIQRLSLVNIDVAGISDNVTWYDNSLVEPVKQFQKMHGLKIDGII 255

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              TL+ +N+ V  R+  L +N  R++    Q      ++VN+P  +L+   +GK    S
Sbjct: 256 GPDTLKWLNMKVPERLALLALNAERMRLWTTQD--DTVIVVNVPGYNLKYWYSGKPVFES 313

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VGRV R TP++ ++++ ++ NP W +P  I+ +D++ + ++D  YL  ++I +I+  
Sbjct: 314 KVVVGRVTRPTPVMSTKLDSLILNPTWNVPHKIMVEDILPMTKRDASYLSRHHIDIIESW 373

Query: 278 --GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              + +    +DW +  P    +  RQ  G  NA+   K    ++   Y+HDTP   LFN
Sbjct: 374 KSDQTLDPALIDWQNVNPKTFPYRMRQQAGNQNALGLYKFNTPNKRAIYLHDTPSKHLFN 433

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
           +  R  +SGC+RV +       LL+         I           + L   +PVH +Y 
Sbjct: 434 HPTRAFSSGCIRVEHADQFATTLLETQGINDSELIPNPDAA--NRAIPLKKRIPVHIIYQ 491

Query: 394 SAWSPKDSIIQFRDDIYGLDNV 415
           + W  +   + +RDDIY LD +
Sbjct: 492 TVWY-EGGEVHYRDDIYRLDRI 512


>gi|157375514|ref|YP_001474114.1| hypothetical protein Ssed_2377 [Shewanella sediminis HAW-EB3]
 gi|157317888|gb|ABV36986.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 483

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 108/364 (29%), Positives = 172/364 (47%), Gaps = 14/364 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
           R+   I + +P    + I +    I  Y+  +    WP +      LG SS  V++LR  
Sbjct: 123 RLSEFIGTILPSF--DEIYRLRNMIGEYKKKV-NVKWPTMSQYEFRLGQSSNEVKQLRWM 179

Query: 118 LIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           L   GDL+ S+        +D  V   +K FQ+RHGL+ +G +D  T+EA+NV    R+ 
Sbjct: 180 LTQLGDLEHSELTRYREAIYDPMVIDGIKSFQLRHGLNVNGNLDKYTVEAINVTPLQRVE 239

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q+Q NL R    L      + V +NIP   L   E G V L+  VI+G+    TPIL + 
Sbjct: 240 QMQRNLWRW-ITLSTPNAEKLVWINIPGYQLSIFEQGSVTLQMKVIIGKPSSPTPILSTY 298

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSP 291
           + ++  NP W  P SII+ +++ L   +P YL      +      K   + + +VD    
Sbjct: 299 LTKLTINPSWRPPASIIKSELLPLNAAEPGYLNHKQFELHGVGLNKKHVIKLGDVDSKQL 358

Query: 292 EP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                 +   Q PG+ NA+   +    +R++ Y+HDTP   LF   VR  + GC+R+   
Sbjct: 359 PTLLRQYRLVQAPGEDNALGKMRFTIVNRHSIYLHDTPAKQLFKRNVRALSHGCIRLEKP 418

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           I L  +L++         +++ V    T    L++ +PV+  Y ++W      +Q R DI
Sbjct: 419 IALSSYLVETDER--ARELQKAVGGSGTRHFSLSSPIPVYITYHTSWVDAAGKLQVRPDI 476

Query: 410 YGLD 413
           Y LD
Sbjct: 477 YNLD 480


>gi|126663199|ref|ZP_01734197.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
 gi|126624857|gb|EAZ95547.1| hypothetical protein FBBAL38_07595 [Flavobacteria bacterium BAL38]
          Length = 529

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 101/420 (24%), Positives = 192/420 (45%), Gaps = 25/420 (5%)

Query: 18  LILPMGLSLVEKPIHASVLD------EIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS 71
           ++L      +   ++   L+      +         +++  +  +    +    +    +
Sbjct: 118 ILLTENFEKLSNHLYKGKLNPKELYNDWDLNPKEIALSNLLEKGIKEKTIASTFNALKPN 177

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLH------LGNSSVSVQRLRERLIISGDLD 125
                  +K++     +      P +  + +       L ++   + ++++RL    D  
Sbjct: 178 HIVYKSLKKSLLEINKL------PNISFQKIEIKNKIILNDTLPEMVKIKKRLAYWKDYK 231

Query: 126 P-SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                ++  +D     AVK FQ RHGL   G++   T++A+N   + RI Q+  NL R K
Sbjct: 232 NKDSLITWVYDTITYKAVKRFQARHGLAQDGVIGIGTIKALNTTKNERIEQIFANLERWK 291

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                 +G  Y++ NIP   L  V N     +  ++VG   R+TPIL S+++  +FNP W
Sbjct: 292 WYP-FDLGEEYLIANIPEYMLNYVTNNDTVAKYRIVVGTKKRKTPILTSKLSNFVFNPTW 350

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            IP +II++D+     ++  Y    ++ + + KG EV  E  +WN  +  ++ + Q PG 
Sbjct: 351 TIPPTIIKEDLTPAASKNRNYFPSRSLTIYNNKGTEVSPE--EWNPAKANSYRYVQKPGY 408

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KDTPT 362
            N++   K+ F +R++ Y+HDT     F+   R  +SGCVRV   + L   +L   +   
Sbjct: 409 NNSLGLVKLNFLNRHSVYLHDTNHRDYFSKTYRSLSSGCVRVETPLVLVKQILVKSNQEK 468

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           WS   I+ ++K  KT  V +   V ++  Y ++W  +++ +QFR+DIY LD      +  
Sbjct: 469 WSGSEIDSIIKLEKTKTVSIKDTVNIYIFYWTSWF-ENNKLQFREDIYDLDKSLYEKLKN 527


>gi|163759687|ref|ZP_02166772.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
 gi|162283284|gb|EDQ33570.1| hypothetical protein HPDFL43_10047 [Hoeflea phototrophica DFL-43]
          Length = 619

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 170/432 (39%), Gaps = 25/432 (5%)

Query: 9   KILYCFFVYLILPMG---LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           K L  F + L L +    L      +  + +    ++      +               +
Sbjct: 189 KELMAFEMRLSLAIANYILDASRGRVDPNRISGY-HDFKRKNPDLGSRLAALSKSEDPAA 247

Query: 66  DIPIISKET--IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSV----QRLRER- 117
            +   + +          +   QD+   G   E+     L  G S+  +      + ++ 
Sbjct: 248 ALLAHNPQGAHFEALAAELKRLQDL-DEGDRIEIAENILLKPGQSNPELSNVMAAISKKA 306

Query: 118 ---LIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLR 172
              L     L  +       +D  +   VK FQ   GL P G+V  +T  AM  +    +
Sbjct: 307 SDELKAEHALLFASYAGKPEYDEELVQLVKDFQKELGLKPDGVVGPATRRAMVGITNADK 366

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           I ++++ + R + L    +  R V +N PA +      GK  L   V+VG+   QT    
Sbjct: 367 IEKVRLAMERARWLP-GVLASRRVFINQPAYTASYYNGGKQELSMRVVVGKRSNQTYFFD 425

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
             I  + FNPYW +P+SII  +M+  LR DP YL  +   +    GK V    V+W++  
Sbjct: 426 DEIELVEFNPYWGVPQSIIFNEMVPKLRNDPGYLDRSGYEVTIG-GKRVSSSNVNWSAVG 484

Query: 293 PP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                  RQ PG  NA+   KI F + +  YMHDTP   LF    R  + GC+R+++   
Sbjct: 485 AGSRVGVRQRPGSSNALGELKIMFPNSHAIYMHDTPSKSLFERDTRAFSHGCIRLQDPRA 544

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           +   +L  T       I   +   +  PV +   +PVH  Y +AW  +   + +  DIYG
Sbjct: 545 MAAKVLGTTV----EDIGSYIAGGQHKPVDVPENIPVHVAYFTAWPNETGAVSYYADIYG 600

Query: 412 LDNVHVGIIPLP 423
            D      I   
Sbjct: 601 RDGYLRKAIDAT 612


>gi|153009554|ref|YP_001370769.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561442|gb|ABS14940.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 668

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 172/408 (42%), Gaps = 21/408 (5%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           L   +   E  + A  L    +   +        +   +  D          S E  A  
Sbjct: 252 LRYAIDAGEGRVIADRLSGFHDLPRNRVDPKAVLEKLASESDPAAYLHGFQPSNEQYAAL 311

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVS---VQRLRERLIISGDLDP------SKG 129
           ++ +A  +   +      L    +  G+++     V  L  R   +G L        +  
Sbjct: 312 KRELANTEPPSAEPIRISL-NGIIKPGDTNDQLSKVVALISRHAPAGYLAQHKQVLDTHA 370

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLE 188
               +D  + SA+K +Q   G  P G++  +TL A+      ++  ++  ++ R++ L  
Sbjct: 371 SGDVYDPELVSAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSMERLRWLP- 429

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
              G RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FNP W +PR
Sbjct: 430 HDFGTRYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVPR 489

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKIN 306
           SII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P   N
Sbjct: 490 SIILNEMLPKVMRDTSYLDRNGYEVYAG-GKKVSASAVNWSAVAAGKAHVGIRQKPSLDN 548

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   +L  + T    
Sbjct: 549 ALGELKILFPNAHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVLGTSVTDLEK 608

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +       +    +K+   VPV   Y +AW   D  I +  D+Y  D+
Sbjct: 609 YF-----GKNERGIKVKEPVPVFISYFTAWPEADGKIHYYGDVYDRDS 651


>gi|222086217|ref|YP_002544749.1| hypothetical protein Arad_2690 [Agrobacterium radiobacter K84]
 gi|221723665|gb|ACM26821.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 633

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 97/385 (25%), Positives = 166/385 (43%), Gaps = 23/385 (5%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVS 110
                    ++S  P  S +   + +  +A  +   S  G   +       L  G SS  
Sbjct: 253 RASPDAAAYLNSRSP--SNQQFTELKAELAKLKGANSTNG-SNISISLTGILKPGGSSPE 309

Query: 111 ----VQRLRERLIISGDLDPSKGL-----SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               V+ ++ R         +  L     +  +   + + V+ FQ   GL   G++  S+
Sbjct: 310 MTNIVKAIQHRGSDVLKTAHAATLASYQGTPDYTPDLVALVEDFQKEKGLTSDGVIGQSS 369

Query: 162 LEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + AM     D +I++L + + +++ L  + +G RYVL+N PA  +    N +  L   V+
Sbjct: 370 VRAMVGENSDAKIQKLVIAMEQLRWLPNE-LGSRYVLINQPAFMVYYHNNNQEQLSMRVV 428

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG    QT     +I  + FNP+W +P+SII  +M+  LR DP YL      +    G+ 
Sbjct: 429 VGGKQHQTFFFEDQIQTVEFNPFWGVPQSIIINEMLPKLRADPNYLDRMGYQVEVG-GRA 487

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V    VDW      +   RQ P   NA+   KI F + +  YMHDTP+   F   +R  +
Sbjct: 488 VASSSVDWYGST-KSVAVRQPPSSDNALGELKILFPNSHAIYMHDTPQKSFFKKDMRALS 546

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GCVR+ +   +   +L  T       I + +   +   V +  +VP++  Y +AW  KD
Sbjct: 547 HGCVRLADPRAMAAAVLNTTVAD----IAKQIAGGQNKAVAVPQKVPIYIAYFTAWPNKD 602

Query: 401 SIIQFRDDIYGLDNVHVGIIPLPED 425
            ++Q+ +D+Y  D      +     
Sbjct: 603 GVVQYFNDVYDRDAATQKALDATTK 627


>gi|110637821|ref|YP_678028.1| hypothetical protein CHU_1417 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280502|gb|ABG58688.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 568

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 109/414 (26%), Positives = 197/414 (47%), Gaps = 14/414 (3%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINES----YHSIVNDRFDNFLARVDMGIDSDIPI-ISK 72
           L+L   +      ++   LD +             +   D+ L          IP+    
Sbjct: 156 LMLTASMYKYTNHLYFGKLDPVAIYPEWNYQRPSKDLITDSLLVIYFNKNIDQIPVRFRP 215

Query: 73  ET--IAQTEKAIAFYQDILSRG-GWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           +    A  + A+     + + G    E+P   + L  G++S  +  +++RL  + +   +
Sbjct: 216 QIAFYASLQTALINADSLEANGFTSKEIPYIGKKLVKGDTSFVILEVKKRLQATTEYSFN 275

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
             L+  FD  +  +VK+FQ   GL  +G++D +TL  +N         ++ N+ R +   
Sbjct: 276 -ELNNVFDEQLFQSVKIFQEHVGLHGTGVIDKTTLAKLNYTPAQIRNTIRANMERCRWFS 334

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +   Y+LVNIP  +L   +NGKV    TVIVG+   QTP+  + I+ + FNPYW +P
Sbjct: 335 NE-LPNEYILVNIPDYTLSHFKNGKVIYNETVIVGKQLNQTPVFQATISNVEFNPYWTVP 393

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           RSI  K+++  L++DPQYL+ +N+ +++   +          S     F  ++ PG  N+
Sbjct: 394 RSIAVKEILPSLKKDPQYLEKHNMFLMEGDKEIASPPSFAGYSDSYFPFTIKEKPGPKNS 453

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +  + YMHDTP   LF+N VR  + GC+R+ N +     LL      +   
Sbjct: 454 LGQVKFSFPNPYSIYMHDTPAKYLFDNDVRSYSHGCIRLHNPLKFADHLLSQQ-GVTEKR 512

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPK-DSIIQFRDDIYGLDNVHVGII 420
           I+E+V++ K   + L T++P+   Y + ++ K D+ + F  D+Y  D   +  +
Sbjct: 513 IDEIVQSEKNYVMALETKMPIMISYFTCYTKKGDNRLYFFYDVYDSDKKIIEGL 566


>gi|329890356|ref|ZP_08268699.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845657|gb|EGF95221.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 518

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 170/426 (39%), Gaps = 39/426 (9%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQ 77
           L     L E  +    ++E + E   + V+       A     +      +         
Sbjct: 114 LAYAKVLSEGRVRPETVEE-LWEMQKNSVDLPRGLVDAVAANKLSQWFDALPPTDLGYTN 172

Query: 78  TEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL----SV 132
                A Y+ I  +GGWP       +  G S   +  L  RL   GDL  +       ++
Sbjct: 173 LSAGYARYRRIARQGGWPAFRIGGTIEPGTSDPRIPALVARLAAEGDLSAAAAERLKGNL 232

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           A+   +E AV+ FQ RHGL   G +  +T  ++    + R RQ+ +NL R + L ++ + 
Sbjct: 233 AYGPELEQAVRSFQTRHGLGSDGRIGGATQRSLTATAEDRARQIALNLERRRWL-KRDLN 291

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              + VN  AA +   ++GK    + V+VG    QTP L      ++ NP W +P  I +
Sbjct: 292 PERIEVNTAAAIMVYWKDGKPVHSNRVVVGTAANQTPSLEKPFASVVANPPWTVPMGIAR 351

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           ++++      P YL  N++++                     +    Q  G  +++ + K
Sbjct: 352 REILPKG---PGYLAANDMYV-------------------NADGWVVQRAGPKSSLGNVK 389

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
            E       ++HDTP    FN  VR  + GCVRV++ I     LL   P       +   
Sbjct: 390 FELQDSYAIFLHDTPARGAFNLSVRQRSHGCVRVQDAIGFARLLLSPDP-ERLALFDAAQ 448

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII----PLPE---D 425
            + +T  V     + V  +Y +A+      + FR+D+Y  D      +     LP+   D
Sbjct: 449 ASGETKRVTTGRNIGVRLLYWTAFVDGQGRVAFREDVYKRDAKLADALGIAVNLPQVIAD 508

Query: 426 HPIDSD 431
            PID D
Sbjct: 509 APIDPD 514


>gi|254500817|ref|ZP_05112968.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222436888|gb|EEE43567.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 658

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 96/420 (22%), Positives = 171/420 (40%), Gaps = 21/420 (5%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQ 77
           L   L      I  + + +  ++     V+             + + +     ++    +
Sbjct: 236 LTYVLDATRGRIDPNRISQY-HDLPRHDVDLVGALEEFTASDNVATALEAHQPQSDHFKK 294

Query: 78  TEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVS----VQRLRERLIISGDLDPSKGL-- 130
               +A  +          +     L  G SS      V  + +    +   D    L  
Sbjct: 295 LSAELARLKAEDEESDQIVIAPGTFLKAGKSSPEMKNIVAAISKHGSETLKTDHEATLAA 354

Query: 131 ---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKL 186
              S  +   + + VK FQ    L   G+V  +T++AM       +I ++++ + R + L
Sbjct: 355 YDGSDLYTPELVALVKGFQKEAKLTADGIVGKNTIKAMVGETNAAKIAKVELAMERSRWL 414

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            E+ +G R V +N PA +    + G   +   V+VG+   QT   + +I  + +NPYW +
Sbjct: 415 PEE-LGERKVFINQPAFTATYHQPGTDPMSMRVVVGKKSNQTNFFYDKIEIVEYNPYWGV 473

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGK 304
           P SII  +M+  L  +P YL      +    G++V    VDW +          RQ PG+
Sbjct: 474 PYSIIVNEMIPKLAANPSYLDQAGYEVTTPGGRKVSSASVDWYAVANKKKSINVRQYPGR 533

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   KI F +R++ YMHDTP   LFN   R  + GC+R+ +   +   +L      S
Sbjct: 534 SNALGEVKILFPNRHHIYMHDTPSKSLFNKDTRAFSHGCIRLHDPKGMAAAVL----GKS 589

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
             ++   +   +    K+  ++PV+  Y +AW   D  I F  D+Y  D   +  +   E
Sbjct: 590 TDYVSSRIAAGQNAQEKVTGDIPVYVSYFTAWPEADGSIGFYTDVYDRDRYLLKALEKTE 649


>gi|75675184|ref|YP_317605.1| hypothetical protein Nwi_0991 [Nitrobacter winogradskyi Nb-255]
 gi|74420054|gb|ABA04253.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 811

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 99/429 (23%), Positives = 170/429 (39%), Gaps = 41/429 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLA--RVDMGIDSDIPIISKETI 75
           ++          +H + +   I    H         N          +DS  P    +  
Sbjct: 343 MMDYARQAQSGRMHWTQVSADIQYPEHPVDPEQVLTNVTTAKDSSAALDSYNPPH--KLF 400

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP---LHLGN--SSVSVQRLRERLIISGDLDPSKGL 130
              ++ +A  +   S G   E+   P              V ++R RL ++         
Sbjct: 401 QALKRKLAELRK-DSEGPVIEIAEGPGLVFRKNAVIEDPRVPQIRARLGVT-----QNPD 454

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKLLEQ 189
              FDA V +AV+ FQ RH L P G++ ++T+ A+N P     I  +  N+ R + L  +
Sbjct: 455 DTRFDADVAAAVREFQARHHLKPDGILGNNTIRALNGPKKDHTIDTIIANMERWRWLPRE 514

Query: 190 ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFNPYW 244
                +G  Y ++NIP  SL+ +++G     + V+VG+     TP+L   +  I  NP W
Sbjct: 515 LGAPSLGDAYAILNIPDYSLKVMQHGAPIWSTRVVVGKPGLHATPLLTETMKYITVNPTW 574

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P SII K+ +  L+QDP  L    + +                          Q PG+
Sbjct: 575 NVPPSIIYKEYLPALQQDPTVLSRMGLKL---------------ERDRNGGIHISQPPGE 619

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTP 361
            NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL       
Sbjct: 620 RNALGRIRFNFPNKFLVYQHDTPDKHLFAKEKRAFSHGCMRVQNPDQYAATLLNIVLPQE 679

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            ++   +   +  R    +   T  PVH  Y +A+  +   +Q R D+YG D   + ++ 
Sbjct: 680 HYTPEKVRS-MYGRNEFNINFPTPFPVHITYQTAFVDQAGKLQLRGDVYGRDAKMLTLLR 738

Query: 422 LPEDHPIDS 430
                 +++
Sbjct: 739 NSNGRDLET 747


>gi|294140768|ref|YP_003556746.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
 gi|293327237|dbj|BAJ01968.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella violacea DSS12]
          Length = 482

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 113/421 (26%), Positives = 185/421 (43%), Gaps = 26/421 (6%)

Query: 2   VGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM 61
           +  +KI   LY   +  +L    S+          D+ +        ++        +  
Sbjct: 78  INEIKITDSLYSHALLDLLAHIRSVKGG----GEADDEVRLLEAINNDE--------LAE 125

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIIS 121
            I S +P    + +++  + I  Y+  L    WP +      LG SS  VQRLR  L   
Sbjct: 126 FIASILPSY--DEVSKIRRMIRVYKSQLDVN-WPTITQVNFKLGQSSKQVQRLRWMLTAL 182

Query: 122 GDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           GDL+ S+        +D  V   +K FQ RHG+  SG +D ST   +N+    R+ Q+Q 
Sbjct: 183 GDLENSELTRYRESIYDPMVIHGIKAFQRRHGIRVSGELDESTALVLNISPQRRVIQMQQ 242

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL R   ++      +Y+ +NIP  SL+    G++ L   VIVG+    TP++ +R+ R+
Sbjct: 243 NLWRW-LMMPPSPPKKYIKINIPDYSLQLFVLGELDLSMKVIVGKPSSPTPVMMTRVTRM 301

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV---EEVDWNSPEP-- 293
             NPYW  P SII+ +++ L   +P YL      +      E+ V     ++    +   
Sbjct: 302 TINPYWTPPSSIIRSELLPLNSTEPGYLNHKGFELHAVGKNEISVVKLTNMEPKQLKGLL 361

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +   Q PGK NA+   +    +  + Y+HDTP   LF+      + GC+R+   + L 
Sbjct: 362 TEYRLVQAPGKDNALGQVRFTIPNTQSIYLHDTPAKNLFDGEHLALSHGCIRLEKALALS 421

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +L+  +       I+  +   KT  V L   +P+   Y +AW      +Q R DIY LD
Sbjct: 422 EYLI--SIHEDSKEIQVALSGSKTRYVSLPDPMPIFITYQTAWVDNRGKLQLRPDIYHLD 479

Query: 414 N 414
            
Sbjct: 480 R 480


>gi|330445897|ref|ZP_08309549.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490088|dbj|GAA04046.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 586

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 100/352 (28%), Positives = 172/352 (48%), Gaps = 20/352 (5%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD-- 135
           T  A+A YQ++ +         R    G++      L + L   GD+D +      +D  
Sbjct: 221 TMDAVAKYQNLPAHTLKASDFTRVYRKGDTLPHGHELVKVLYTLGDMDQA-----HYDHL 275

Query: 136 ---------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
                      V  ++K FQ RHGL   G+V  +T++ + +P +   R+L +N +R+  L
Sbjct: 276 SHQAKITNTGAVFESLKTFQKRHGLSSDGIVGPATVQQLVMPYNEIARRLALNTLRVATL 335

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +      ++ VNIP   LE  + G V   S VIVGR  R T +  S I  ++ NPYW +
Sbjct: 336 NKHSEDRPHIWVNIPNYKLEVYDKGNVVFESKVIVGRDSRPTNLFSSAITTMVVNPYWNV 395

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFI--FRQDP 302
           P +I Q D++  ++++  YLK +N+ +++       +    ++W++  P  F   F+Q P
Sbjct: 396 PITIKQHDVIPKVKRNIGYLKQHNMQILNSWRDRTVINPTSINWSTVNPKTFPHEFQQGP 455

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  +++     
Sbjct: 456 GPHNSLGRVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVERAYDLANYVIDYQNR 515

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +     +++   K   V L+  + V FVY++AW  ++  +Q R+DIYG D+
Sbjct: 516 GNIPAFTKMLNAEKQKTVSLSKRIDVDFVYLTAWVDQNGKVQMREDIYGYDS 567


>gi|330445733|ref|ZP_08309385.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489924|dbj|GAA03882.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 579

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 116/415 (27%), Positives = 181/415 (43%), Gaps = 21/415 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIV--NDRFDNFLARVDMGIDSDIPIISK 72
           F Y+    G+               I              ++   R+   I    P    
Sbjct: 157 FAYMGFIEGIQQKGNLWLFGETPPTIFPLPSDTFIEELLHNHEQQRLRYFISRLKP--HD 214

Query: 73  ETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPS---- 127
           +   +   A+    +I     WP  L    +  G    ++  +   L   GD+ PS    
Sbjct: 215 DEYIELVAALDELNEIKDMR-WPVFLFKGIIRPGQYVNNMDGVVTVLETLGDMTPSEARK 273

Query: 128 --KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                       V  A+K FQ RHGL   G++   T + + + +  RIR L +N  R++ 
Sbjct: 274 IRTQKRKRLSGSVVIAIKRFQERHGLKSDGVIGPQTQQWLALSLKQRIRLLALNAQRLRL 333

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                     V+VNIP+  +    NG+  L S VIVGR  RQTP++ S I  ++FNPYW 
Sbjct: 334 WSVTPK--TGVVVNIPSYYMNLWLNGEKVLGSKVIVGRPSRQTPMMGSDIQSVVFNPYWN 391

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWN--SPEPPNFIFRQD 301
           +P SI++KD+M  +R++  YL  NN  +I   G  +++ +  + ++  SP    +  RQ 
Sbjct: 392 VPNSIMKKDIMPKVRRNRSYLSRNNYEVIKGWGSAQKISINSIPYHLLSPNRFPYRLRQK 451

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PGK NA+   K  F +    Y+HDT    LFN   R  +SGC+RV     L   LL+ + 
Sbjct: 452 PGKRNALGLFKFNFPNSQAIYLHDTSSRSLFNKHERALSSGCIRVEQAKSLAKVLLEYS- 510

Query: 362 TWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             S      + ++RKT  + L     VPV  +Y +AW  +  ++ +R DIY  D 
Sbjct: 511 GSSEQRFNNLSRSRKTRTIVLGDGKSVPVDLIYQTAWVDELGLVNYRSDIYKYDR 565


>gi|90579549|ref|ZP_01235358.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
 gi|90439123|gb|EAS64305.1| hypothetical protein VAS14_01266 [Vibrio angustum S14]
          Length = 579

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 21/415 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRF-DNFLARVDMGIDSDIPIISK 72
           F Y+ L  G+           +   I+       +      +   R+   I    P+   
Sbjct: 157 FAYMGLIEGIQKKGNLWLFGDIPPTILPLPSDGFLEKLLRSHEQQRLRYFIARLKPL--D 214

Query: 73  ETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               +   A+    +++    WP  L    +  G    +++ +   L   GD+   +  +
Sbjct: 215 TEYTELVTALYKL-NLIKDTRWPVFLFKGNIQPGQYVKNIEGVVTVLETLGDMTALEAEN 273

Query: 132 VA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                       V  A+K FQ RHGL   G++   T + + + +  RIR L +N  R++ 
Sbjct: 274 ARSQKIQNLSGSVLIAIKRFQERHGLKSDGVIGPQTQQWLALNIKERIRLLALNAQRMRL 333

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                     ++VNIP+  +     G+  L S VIVGR  RQTP+++S I  ++FNPYW 
Sbjct: 334 WSV--KPDTGIVVNIPSYYMNLWLEGEKVLGSKVIVGRPSRQTPMIYSDIQSVVFNPYWN 391

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWN--SPEPPNFIFRQD 301
           +P SI++KD+M  +R++  YL ++N  +I     G+++ +  + ++  SP    +  RQ 
Sbjct: 392 VPNSIMKKDIMPKVRRNRNYLANHNYEVIKGWDNGQKIAINSIPYHLLSPNRFPYRLRQK 451

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PGK NA+   K  F +    Y+HDT    LF    R  +SGC+RV     L   LL+ + 
Sbjct: 452 PGKRNALGLYKFNFPNNQAIYLHDTASRSLFKKHERALSSGCIRVEQAKSLAKVLLEYS- 510

Query: 362 TWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             S    + + ++RKT  + L  +  VPV  +Y +AW     ++ +R DIY  D 
Sbjct: 511 GSSVQRFDNLSRSRKTRTIVLGDSKSVPVDLIYQTAWVDDLGLVHYRSDIYEYDR 565


>gi|197334392|ref|YP_002155958.1| cell wall degradation protein [Vibrio fischeri MJ11]
 gi|197315882|gb|ACH65329.1| cell wall degradation protein [Vibrio fischeri MJ11]
          Length = 512

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 93/367 (25%), Positives = 180/367 (49%), Gaps = 16/367 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
            +     +  P  S +   +  + ++ Y           +  R +        V  +  R
Sbjct: 146 DLVSFTHALRP--SSDQYEELYRRLSHYYQPYEDSESVFIKERLIRPNQF-TDVNAIIYR 202

Query: 118 LIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L +SG+++  +        +  +D+ +   +K FQ RHGL   G++   TL  +N+    
Sbjct: 203 LQVSGEINHQEAEMLLRQSNGHYDSSLVLIIKEFQKRHGLKQDGIIGPKTLHWLNMTAKE 262

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R+R + +N+ R++    +     +VLVNIP+  +   + G++   S VIVG+ +R+TPI 
Sbjct: 263 RVRIMALNIQRLRLW--ENKNSHFVLVNIPSYEMAYWQEGELVFTSKVIVGKPERRTPIF 320

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWN 289
            +R+N I+FNP W +P  I+++D++     +  +L+  N  +I      + + ++++DW 
Sbjct: 321 TTRLNAIVFNPEWKVPTKIMREDILPKALSNKDFLQSQNFEIIPTWLSKEVISIDDIDWE 380

Query: 290 SPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                   +  +Q  G  NA+   K    +RN  Y+HDTP   LF+   R  +SGC+RV 
Sbjct: 381 QVNVETFPYKLKQKSGNTNALGRYKFNTPNRNAIYLHDTPSRSLFSKQHRAYSSGCIRVE 440

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +    L+K++  +S    ++  +  +T+ V L  ++ V+ +Y ++W  +D+ +QFR+
Sbjct: 441 KASEFAQLLMKES-HFSTQDYKDYHELPETSKVTLDQKISVYTIYQTSWVGEDNQVQFRN 499

Query: 408 DIYGLDN 414
           DIY  D 
Sbjct: 500 DIYKYDE 506


>gi|218678646|ref|ZP_03526543.1| hypothetical protein RetlC8_07084 [Rhizobium etli CIAT 894]
          Length = 396

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 100/371 (26%), Positives = 160/371 (43%), Gaps = 24/371 (6%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRL 114
                I S  P   +      +  +A  +     G    +     + L  G SS  +  +
Sbjct: 19  DAGAYIASRSPDGPQ--FEALKAELAKLRA-ADGGNEERIVVSLDKLLKPGESSPEIANI 75

Query: 115 RERLIISGDLD---------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + +   G             +   S  +   + S V+ FQ   GL   G++  +T+ AM
Sbjct: 76  VKAIGKHGSETLKTDHAATLAAYTGSADYSPEIVSLVEDFQKERGLKADGVIGQATVRAM 135

Query: 166 NV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                   +I +L V + + + L  + +G RYV++N PA       +GK  L   V+VG 
Sbjct: 136 TGGDSNASKIDKLDVAMEQARWLP-EDLGSRYVMINQPAFMAYYHNDGKEQLSMRVVVGG 194

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            + QT      I  + FNP+W +P+SII  +M+  LR DP YL      + +  G  V  
Sbjct: 195 KNNQTYFFDDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVAS 253

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +R  + GC
Sbjct: 254 SSVDWYGST-DNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGC 312

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VR+ N   +   +L  T       + + + T +   VK+  ++PV+  Y +AW  KD ++
Sbjct: 313 VRLSNPRAMAAAVLGTTVDD----VAKQIATGQNHAVKVPQKIPVYVSYFTAWPNKDGVV 368

Query: 404 QFRDDIYGLDN 414
           ++ DD+YG D 
Sbjct: 369 EYFDDVYGRDA 379


>gi|110633909|ref|YP_674117.1| hypothetical protein Meso_1556 [Mesorhizobium sp. BNC1]
 gi|110284893|gb|ABG62952.1| conserved hypothetical protein [Chelativorans sp. BNC1]
          Length = 661

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 93/419 (22%), Positives = 162/419 (38%), Gaps = 23/419 (5%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQT 78
           L          +  + L    +     +        LA           +  + E     
Sbjct: 214 LRYARDARLGRLDPNKLSGYHDFKRKPLDEKLVLEILASSAEPATYLQSLHPQNELFNAL 273

Query: 79  EKAIAFYQDILSRGGWPEL--PIRPLHLGNSSVSVQRLRERLIIS-----------GDLD 125
              +   +    +     +  P   +  G S     ++   L I            G + 
Sbjct: 274 RDELKKLRTEAEQEKEEIVIAPDILVRPGASHPDFSKV--LLAIESKADDDFRAEHGAVL 331

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIK 184
            +   S  +   +   +K  Q +H L P G+V   T+ A+       RI ++ +++ R++
Sbjct: 332 TAHLGSQTYAEELIPIIKAVQRQHKLSPDGIVGQRTVRALTGESASSRIEKVLLSMERLR 391

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                 +G   V++N+P+ +    ENG   L    +VG+   QT   H  I  + FNPYW
Sbjct: 392 WQPSY-LGSARVMINVPSFTASYFENGTEKLSMRAVVGQSSSQTYFFHDEIEYVEFNPYW 450

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPG 303
            +PRSII  +M+  LR+DP YL      + D +G+ V    ++W        +  RQ PG
Sbjct: 451 GVPRSIIVNEMLPKLRRDPGYLDRAGYEVFDSRGRRVASSAINWAVYGANVPYGVRQPPG 510

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   KI F + ++ YMHDTP+  LF    R  + GCVR+ +   +   +L      
Sbjct: 511 ASNALGRLKIMFPNSHDIYMHDTPQKSLFARDSRAFSHGCVRLEDPGAMAAAVL----GI 566

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           S   +   +   +     + +++PV+  Y +AW      I +  DIY  D      +  
Sbjct: 567 SSEEVAAEINKGRNMRRNVPSKIPVYVGYFTAWPETSGSISYHADIYERDAHLKKALSR 625


>gi|192359326|ref|YP_001983485.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
 gi|190685491|gb|ACE83169.1| cell wall degradation protein [Cellvibrio japonicus Ueda107]
          Length = 746

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 100/293 (34%), Positives = 149/293 (50%), Gaps = 4/293 (1%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              FD Y+  AVK FQ    L+  G +  +T  A+NV    R+ Q++VNL R + LL   
Sbjct: 455 DEVFDEYLVEAVKTFQREQYLEVDGAIGPATRAALNVSAKTRLEQIRVNLDRARWLL-HS 513

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    VLV+I    +   +  +   RS V VG   R +P+  S +N I  NP W +P +I
Sbjct: 514 IPPEMVLVDIAGFKVTYFKASQPIWRSRVQVGMAYRTSPLFRSEVNYITLNPTWTVPPTI 573

Query: 251 IQKDMMALLRQ-DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           ++KD++  LR+ D  YL+DN I +++ +G+E+    +DW    P     RQD G   A+ 
Sbjct: 574 LRKDILPKLRKGDLSYLRDNRIRVLNRQGQELDPASIDWQ--RPGAITLRQDAGPKAALG 631

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              I F + +  Y+HDTP   LF    R  +SGC+RV   ++L   LL DTP W    IE
Sbjct: 632 KAVIRFPNSHAVYLHDTPHQRLFEKSQRAFSSGCIRVERALELVQLLLSDTPGWDAAAIE 691

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           + + T  T  V LA  VP+   Y +A    +  + F+ DIY  D V +  +  
Sbjct: 692 KALATGNTRNVILARRVPILLAYWTADVIDEHKVVFKPDIYARDPVLLAALNR 744



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +     +  Y+ ++  GGWP L   P L        +  LR RL +SG+  P       
Sbjct: 310 YSGLRAGLLRYRQLVDDGGWPALESGPTLKPCMIDPLIAVLRRRLAVSGEYQPPVADQRP 369

Query: 134 FDAYVESA 141
             + ++SA
Sbjct: 370 ASSSLDSA 377


>gi|163751738|ref|ZP_02158956.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
 gi|161328390|gb|EDP99549.1| hypothetical protein KT99_12214 [Shewanella benthica KT99]
          Length = 453

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 108/366 (29%), Positives = 170/366 (46%), Gaps = 14/366 (3%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRE 116
           A +   I S +P      + +  + I  Y+  L    WP +      LG SS  VQRLR 
Sbjct: 92  AELSAYIASILPSY--NEVLRIRRMIRVYKTQLDM-DWPSVTRVNFKLGQSSQQVQRLRW 148

Query: 117 RLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
            L + GDL+ S+        +D  V   +K FQ RHGL  +G +D+ T++A+N+    R+
Sbjct: 149 MLTVLGDLENSELTRYREAIYDPMVIQGIKSFQRRHGLTANGELDAPTVQALNISPKRRV 208

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            Q+Q NL R   +L      +Y+ +NIP  SLE    G++ L   VIVG+    TP+L +
Sbjct: 209 IQMQQNLWRW-IMLPSSPPPKYIKINIPNYSLELFVLGELDLSMKVIVGKPSSPTPVLLT 267

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH---MIDEKGKEVFVEEVDWNS 290
           R+ R+  NPYW  P SII+ +++ L  ++P YL         +  +    V +  +    
Sbjct: 268 RVTRMTINPYWTPPTSIIRSELLPLNSREPGYLNHKGFELHPVAKKDNPVVKLINIAPRQ 327

Query: 291 PEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +   Q PGK NA+   +    +  + Y+HDTP+  LF       + GC+R+  
Sbjct: 328 LAELLKEYRLVQAPGKDNALGKLRFTIPNTESIYLHDTPQKKLFAGNDLALSHGCIRLEK 387

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            + L  ++L      +   I   +    T  V L+  +P+   Y +AW      +Q R D
Sbjct: 388 AVALFEYILSTQ--DNAEEIRRALGQPNTRYVSLSNAIPIFITYQTAWVDSRGKLQLRPD 445

Query: 409 IYGLDN 414
           IY LD 
Sbjct: 446 IYHLDR 451


>gi|241204955|ref|YP_002976051.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858845|gb|ACS56512.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 637

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 102/413 (24%), Positives = 173/413 (41%), Gaps = 27/413 (6%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L      V   I  + +    +   +  +     +       V   I S  P  S+   
Sbjct: 218 VLAFVQDTVRGRIDPNKISGYHDFQRKVVNLAPVLKLARLSPDVGAYIASRSPDSSQ--F 275

Query: 76  AQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
              +  +A  +     G    +     R L  G+SS  +  + + +   G        + 
Sbjct: 276 QALKAELAKLRA-ADGGNEERIVVSLDRLLRPGDSSPEIANIVKAIGKHGSETLRTDHAA 334

Query: 133 A---------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLM 181
                     +   + S V+ FQ   GL   G++  +T+ AM        +I +L V + 
Sbjct: 335 TLAAYAGSIDYSPDIVSLVEEFQKERGLKADGVIGQATVRAMTGGDTNASKIDKLIVAME 394

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + + L  + +G RYV++N PA  +    +GK  L   V+VG  + QT      I  + FN
Sbjct: 395 QARWLP-EDLGSRYVMINQPAYMVYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFN 453

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P+W +P+SII  +M+  LR DP YL      + +  G  V    VDW      N   RQ 
Sbjct: 454 PFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVASSSVDWYGSTN-NVSVRQP 511

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           P   NA+   KI F + +  YMHDTP    F   +R  + GCVR+ +   +   +L  T 
Sbjct: 512 PSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLADPRAMAAAVLGTTV 571

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                 + + + + +   V++  ++PV+  Y +AW  KD ++++ DD+YG D 
Sbjct: 572 DD----VAKQIASGQNHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDA 620


>gi|116252447|ref|YP_768285.1| hypothetical protein RL2700 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257095|emb|CAK08189.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 637

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 103/424 (24%), Positives = 174/424 (41%), Gaps = 27/424 (6%)

Query: 19  ILPMGLSLVEKPIHASVLD---EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +L      V   I  + +    +   +  +     +       V   I S  P   +   
Sbjct: 218 VLAFVQDTVRGRIDPNKISGYHDFQRKVVNLAPVLKLSRMSPDVGAYIASRSPDSPQ--F 275

Query: 76  AQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
              +  +A  +     G    +     R L  G+SS  +  + + +   G    +   + 
Sbjct: 276 QALKAELAKLRA-ADGGNEERIVVSLDRLLRPGDSSPEIANIVKAIGKHGSETLNTDHAA 334

Query: 133 A---------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLM 181
                     +   + S V+ FQ   GL P G++  +T+ AM        +I +L V + 
Sbjct: 335 TLAAYAGSIDYSPDIVSLVEDFQKERGLKPDGVIGQATVRAMTGGDTNASKIDKLVVAME 394

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + + L  + +G RYV++N PA  +    +GK  L   V+VG  + QT      I  + FN
Sbjct: 395 QARWLP-EDLGSRYVMINQPAYMVYYHNDGKEQLSMRVVVGGKNNQTYFFDDEIETVEFN 453

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P+W +P+SII  +M+  LR DP YL      + +  G  V    VDW      N   RQ 
Sbjct: 454 PFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-EVNGHAVASSSVDWYGSTN-NVSVRQP 511

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           P   NA+   KI F + +  YMHDTP    F   +R  + GCVR+ +   +   +L  T 
Sbjct: 512 PSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDMRALSHGCVRLADPRAMAAAVLGTTV 571

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
                 I + + + +   V++  ++PV+  Y +AW  KD ++++ DD+YG D        
Sbjct: 572 DD----IAKQIASGQNHAVRVPQKIPVYVSYFTAWPNKDGVVEYFDDVYGRDGYVDKAFD 627

Query: 422 LPED 425
               
Sbjct: 628 ATSK 631


>gi|262275620|ref|ZP_06053429.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
 gi|262219428|gb|EEY70744.1| hypothetical protein VHA_002601 [Grimontia hollisae CIP 101886]
          Length = 505

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 109/368 (29%), Positives = 178/368 (48%), Gaps = 18/368 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRE 116
           ++   +    P  S+    +   AI   QD      W E     L  LG+       L  
Sbjct: 130 QLYDFVYDLRPDTSQ--YRKMASAIVALQD-NKSAHWAEFTQGGLVRLGDRLEDPGSLIT 186

Query: 117 RLIISGDLDPSKGLS------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            L   G L               ++A +  AVK FQ  HGL   G++ ++T   MN+   
Sbjct: 187 NLERQGALSAYDAQRLKRDQVNHYNATLVEAVKRFQENHGLKKDGVIGNNTRRWMNMSPS 246

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            RI+ L +N+ R++    ++   + +LVNIP   +E   + K+ L S V+VGR  R+TP+
Sbjct: 247 SRIQILALNMERLRLWPTER--EKIILVNIPNYEMEFWLDRKLILDSKVVVGRPSRRTPL 304

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDW 288
             SR++ ++FNP W +P  I+++D++  ++QD +YL  ++  ++     G  +  EE+DW
Sbjct: 305 FESRLDSVVFNPSWNVPVKIMREDILPKVQQDNEYLNKHSYTVLSSWVNGSVISAEEIDW 364

Query: 289 NSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            +  P +F +R  Q PG  NA+   K    + N  Y+HDTP   LFN   R  +SGC+RV
Sbjct: 365 ETVSPNSFPYRLQQSPGSFNALGRYKFNTPNGNAIYLHDTPAKELFNKSRRAYSSGCIRV 424

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           +    L   LL +         E   +  +T  V L  ++ VH +Y +AW  ++  +QFR
Sbjct: 425 QKAEILAEILL-NKSGKRLGDYEYYQRIPETKWVSLRQKISVHTIYQTAWV-EEGKVQFR 482

Query: 407 DDIYGLDN 414
           +D+Y  D 
Sbjct: 483 EDVYRYDA 490


>gi|315179999|gb|ADT86913.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
          Length = 517

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 97/382 (25%), Positives = 169/382 (44%), Gaps = 12/382 (3%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSRGGWPELP 98
           +         R    +A    GI   I   + +     Q   A  +   I  +     + 
Sbjct: 136 HPLPLPSEQARLALHIAVGIHGITDLIDEYTPQDAAYRQLVSAYRYLSQIEPQMLSVYVQ 195

Query: 99  IRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            R    G+     + L +RL +   D+         +D  +   VK FQ  HGL   G++
Sbjct: 196 ARLKRPGDKLEDRRTLIQRLSLVNIDVAGISDNVTWYDNSLVEPVKQFQKMHGLKIDGII 255

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              TL+ +N+ V  R+  L +N  R++    Q      ++VN+P  +L+   +GK    S
Sbjct: 256 GPDTLKWLNMKVPERLALLALNAERMRLWSTQD--DTVIVVNVPGYNLKYWYSGKPVFES 313

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V+VGRV R TP++ ++++ ++ NP W +P  I+ +D++ + ++D  YL  ++I +I+  
Sbjct: 314 KVVVGRVTRPTPVMSTKLDSLILNPTWKVPHKIMVEDILPMTKRDASYLSRHHIDIIESW 373

Query: 278 --GKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              + +    +DW +  P    +  RQ  G  NA+   K    ++   Y+HDTP   LFN
Sbjct: 374 KSDQTLDPALIDWQNVNPKTFPYRMRQQAGNQNALGLYKFNTPNKRAIYLHDTPSKHLFN 433

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
           +  R  +SGC+RV +       LL+         I           + L   +PVH +Y 
Sbjct: 434 HPTRAFSSGCIRVEHADQFATALLETQGINHSELIPNADDA--NRAIPLKKRIPVHIIYQ 491

Query: 394 SAWSPKDSIIQFRDDIYGLDNV 415
           + W  +   + +RDDIY LD +
Sbjct: 492 TVWY-EGGEVHYRDDIYRLDRI 512


>gi|327478928|gb|AEA82238.1| putative periplasmic protein [Pseudomonas stutzeri DSM 4166]
          Length = 526

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 21/393 (5%)

Query: 30  PIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
            +    L +   E      +    D+    + + +     +      A+   A+  Y+D+
Sbjct: 131 HLARGRLRQADIEPIWRSPDAPEADDRQRLLQIAVQGLADLPGAFDRARPPHAL--YRDL 188

Query: 89  LSR---------GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            +            W  LP  P L  G        LRE L+++G       L + +D  +
Sbjct: 189 RAAYARQRQAALPAWRPLPSGPTLRPGMRDERSPLLRE-LLLAGAGSAPA-LDLRYDDEL 246

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             AV+ FQ++HGL+  G+V ++TL A+NV    R+ QL++NL R++ +  + +  + +LV
Sbjct: 247 VEAVRGFQLQHGLEADGVVGAATLAALNVSPASRLDQLRINLERLRWI-SRDLEPQSLLV 305

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           +I  A L    +     ++   VGR  RQTP L SRI+R+  NP W +P +I+++D + L
Sbjct: 306 DIAGARLIYFRDSCPFWQTRTQVGREARQTPPLKSRISRLTLNPTWTVPPTILKQDKLPL 365

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           +R+D  YL  + + +ID +G  V    VDW    P   + RQD G  N +    I F + 
Sbjct: 366 IREDIAYLARHQMRVIDAQGNAVDPYAVDW--ANPRGILLRQDAGPANPLGQVAIRFANP 423

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
            + Y+HDTP   LF    R  +SGCVRV + + L   LL+      R  +  ++++ +T 
Sbjct: 424 FSVYLHDTPSKPLFERAARAVSSGCVRVESALQLVDLLLEADE---RDTVARLLQSGETH 480

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             +LA + P+   Y +A +    + ++R DIY 
Sbjct: 481 EYRLARQTPILMAYWTADADDSGLPRYRPDIYK 513


>gi|330722118|gb|EGH00028.1| L2CD-transpeptidase YcbB [gamma proteobacterium IMCC2047]
          Length = 439

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 11/365 (3%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG 129
           SK++      A+  Y++I + G W      PL   G+    V +L+  L   GDL P   
Sbjct: 57  SKQSFESLADAVLTYENIQNNGRWRTFSAGPLLRQGDRHPQVSQLKAHLQWLGDLPPQDI 116

Query: 130 LS---VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           LS     FD  +  A+  FQ RH +   G++   T   +NVP   RI QL +N+ R +  
Sbjct: 117 LSLGSRLFDRALHQALLRFQARHSVKADGVLGPKTRALLNVPPWQRIDQLVLNMYRQQ-- 174

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +     Y+ +N+P  +L   + G+V L    +VG+  RQTP   + + +++ NP W +
Sbjct: 175 QNEINDDVYLHINLPEYNLRFYQFGEVLLEMRAVVGKRTRQTPEFSAAVTKLIINPDWNV 234

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPP--NFIFRQD 301
           P+SI  +D++  L  DP++L+  N+ ++        EV   +VD++        + F + 
Sbjct: 235 PKSIAYRDILPKLHNDPEFLRKRNLRVVSGWQLPRVEVPEHQVDFDRMYQGAEYYRFWEP 294

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG+ N +   K +  S N+ Y+HDT +  LF+   R  +SGC+R+ +   L   L++   
Sbjct: 295 PGETNTLGRMKFQLDSDNSIYLHDTQQKNLFDAESRAFSSGCIRLESPRALADTLMRVAN 354

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            W+   ++ +        +++   + VH  Y +AW  K  ++ F +D+Y  D+V   ++ 
Sbjct: 355 QWTPEVLDPLFDGPDMIKLRVGKNILVHVTYWTAWLDKRGVLHFANDMYERDSVDFAVMQ 414

Query: 422 LPEDH 426
             +  
Sbjct: 415 ERQRQ 419


>gi|89073969|ref|ZP_01160475.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
 gi|89050297|gb|EAR55801.1| hypothetical protein SKA34_15405 [Photobacterium sp. SKA34]
          Length = 579

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 108/415 (26%), Positives = 182/415 (43%), Gaps = 21/415 (5%)

Query: 15  FVYLILPMGLSLVEKPIHASVLD-EIINESYHSIVNDRF-DNFLARVDMGIDSDIPIISK 72
           F Y+     +           +   I+       + +    +   R+   I    P+   
Sbjct: 157 FAYMGFIEAIEKKGNLWLFGDIPPTILPLPSDRFIEELLTSHEQQRLRFFIARLKPL--D 214

Query: 73  ETIAQTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
               +   A+    +I     WP  L    +  G    +++ +   L   GD+   +  +
Sbjct: 215 NEYTELVTALNKLNEIRDTR-WPVFLFKGIIQPGKYVKNIEGVVTVLETLGDMTTLEAEN 273

Query: 132 ------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                       V  AVK FQ RHGL   G++ + T + + + +  RIR L +N  R++ 
Sbjct: 274 VRSQKIQYLSGSVLIAVKRFQERHGLKNDGVIGTQTQQWLALNIKERIRLLALNAQRMRL 333

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                     ++VNIP+  +     G+  L S VIVGR  R TP++ S I  ++FNPYW 
Sbjct: 334 WSV--KPDTGIVVNIPSFYMNLWLEGEKVLGSKVIVGRPSRHTPMIDSDIQSVVFNPYWN 391

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWN--SPEPPNFIFRQD 301
           +P SI++KD+M  +R++  YL ++N  +I      +++ +  + ++  SP    +  RQ 
Sbjct: 392 VPNSIMKKDIMPKVRRNRNYLANHNYEVIKGWDNAQKIAINSIPYHLLSPNRFPYRLRQK 451

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PGK NA+   K  F +    Y+HDT    LF    R  +SGC+RV     L   LL+ + 
Sbjct: 452 PGKRNALGLYKFNFPNNQAIYLHDTASRSLFKKNERALSSGCIRVEQAKSLARVLLEYS- 510

Query: 362 TWSRYHIEEVVKTRKTTPVKL--ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             S    + + ++RKT  + L     VPV  +Y +AW     ++ +R DIY  D 
Sbjct: 511 GSSEQRFDSLSRSRKTRTIVLGDNKSVPVDLIYQTAWVDDSGLVHYRSDIYQYDR 565


>gi|256061060|ref|ZP_05451216.1| cell wall degradation protein [Brucella neotomae 5K33]
          Length = 670

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 488

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 489 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 547

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 548 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 607

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 608 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|294852310|ref|ZP_06792983.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
 gi|294820899|gb|EFG37898.1| cell wall degradation protein [Brucella sp. NVSL 07-0026]
          Length = 666

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMATAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|261325062|ref|ZP_05964259.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|261301042|gb|EEY04539.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
          Length = 666

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|148558873|ref|YP_001258930.1| cell wall degradation protein [Brucella ovis ATCC 25840]
 gi|148370130|gb|ABQ60109.1| cell wall degradation protein [Brucella ovis ATCC 25840]
          Length = 656

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 240 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 297

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 298 ALKRALA--DTEPPRGKPIRISFDGGIKPGDKSEQLSKVVALISRHVPADYLAQHRDVLA 355

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 356 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 415

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   + ++  ++FNP W 
Sbjct: 416 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYDKVQTVVFNPSWG 474

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 475 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 533

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 534 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 593

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 594 LDKYF-----GKDERDIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 639


>gi|300023955|ref|YP_003756566.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525776|gb|ADJ24245.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 743

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 103/449 (22%), Positives = 178/449 (39%), Gaps = 52/449 (11%)

Query: 20  LPMGLSLVEKPIHASVLDEII--NESYHSIVNDRFDNFLAR-VDMGIDSDIPIISKETIA 76
           L          +  + L  I+              +   A      +    P    +   
Sbjct: 241 LKYARFARGGRLDPASLSNILDMKPPVKDPKTVMRELADASHPGPFLRGFNPKH--DGFE 298

Query: 77  QTEKAIAFYQDILSRGGWPELPI--------RPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           +  + +   + +      P  P         + L LG     V  LR+RL +      S 
Sbjct: 299 KLRQELLKARGVTVEEEAPTDPAEEVKLPRGKVLRLGTRDDQVALLRQRLKV---PSESP 355

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-------VPVDLRIRQLQVNLM 181
             +  +D  +  AVK +Q  +GL P G+V +    A+N       +     + +L VN+ 
Sbjct: 356 DANDLYDDALLDAVKDYQRANGLTPDGLVGNGVRNALNGGGKSKRIDPARNVDRLIVNME 415

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R + L  + +G  YV+ NIP  + E     +  L   +IVG+    TP+L + +  ++F 
Sbjct: 416 RWRWLP-ENLGSFYVMNNIPEYTSEIWRGKERVLNQRMIVGQPSWPTPVLTASMQYVIFR 474

Query: 242 PYWVIPRSIIQKDMMALLRQ--DPQY--------------------LKDNNIHMIDEKGK 279
           P W +P  I  K++   L+Q  +  Y                    L+   + +    G+
Sbjct: 475 PSWGMPDGIKAKELAPRLKQASNTGYDFFDQLFGGGGGGNSGGARVLQAYKLQV-SFNGR 533

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            V    V+WN+ +   + F Q PG  N +   K  F ++++ YMHDTPE  LF    R  
Sbjct: 534 PVDPNSVNWNTADIRRYSFVQPPGPDNPLGMVKFRFPNKHDVYMHDTPERGLFGQANRAL 593

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GC+RV +       +L++   +S   + E+        V L+  VPV+ VY +A   +
Sbjct: 594 SHGCLRVGDPRRTAEVILQEDKGYSAEKVGELWNGG--ADVTLSKPVPVYLVYFTARVDE 651

Query: 400 DSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
           D  ++   DIYG DN  +  +     HP+
Sbjct: 652 DGKLRTYGDIYGNDNRVMSALR---GHPV 677


>gi|254704262|ref|ZP_05166090.1| cell wall degradation protein [Brucella suis bv. 3 str. 686]
          Length = 670

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 488

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 489 VPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 547

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 548 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 607

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 608 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|152990487|ref|YP_001356209.1| hypothetical protein NIS_0738 [Nitratiruptor sp. SB155-2]
 gi|151422348|dbj|BAF69852.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 492

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 14/360 (3%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLI 119
            S   I+    +    + +  Y++I  RGGW  + +      L  G     V +LR RL+
Sbjct: 128 KSYDHILQNPYLDMLYEILNKYENIKKRGGWGVITLSNDYAYLLPGKKYDEVVQLRWRLM 187

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
             G L         +D  ++ AV+ FQ RH L P G+V  +TL+ +N  V+  I ++ +N
Sbjct: 188 QEGYLKDQNMTDTVYDENLKLAVEEFQRRHFLKPDGIVGPTTLKVLNESVESIIEKILIN 247

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + R++  L++     YV VNIP   L    +G +   S VIVGR +R TP++   I+  +
Sbjct: 248 IERLRWYLQEDK--SYVFVNIPQFRLFLWHDGDMVFDSKVIVGRKERPTPLMRHEISYAV 305

Query: 240 FNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNI--HMIDEKGKEVFVEEVDWNSPEPPNF 296
            NPYW  P++II +D++  L+    + L+   I   +     + +  + + W++ +   F
Sbjct: 306 LNPYWRAPKTIIAQDILPKLKAGKFEELEKEGIIASLDRYANETIPFDLIYWDAIDLSTF 365

Query: 297 IFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                Q PG  N +   K+ F ++ + Y+HDT    LF    R  +SGCVRV   I+L  
Sbjct: 366 PIVFLQKPGPKNFLGFVKLMFPNKYDVYLHDTNARDLFRYSYRALSSGCVRVEKPIELFH 425

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +     T S   I + +   +T  V++  + PV+ +YI+     D  I F  DIY LD 
Sbjct: 426 LV---EGTLSYREIFDRLWDHQTKKVRIHPKFPVYLMYITVMKEDDGNIYFYPDIYQLDR 482


>gi|119945331|ref|YP_943011.1| cell wall degradation protein [Psychromonas ingrahamii 37]
 gi|119863935|gb|ABM03412.1| cell wall degradation protein [Psychromonas ingrahamii 37]
          Length = 513

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 96/392 (24%), Positives = 185/392 (47%), Gaps = 18/392 (4%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
            +   +       ++  F+    ++    +    PI ++++  Q  + I   ++   +  
Sbjct: 128 RIKNSLKAPSKESIDAFFNTGSPQIRLRYLQRLSPISAQQS--QLYQNILKLKNKPVQ-I 184

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQ 146
           +  + +     +G+S    + L  RL ISG+L   +           +   +   ++ FQ
Sbjct: 185 FDAVKLTEFAKIGDSLAQKKVLLSRLEISGELSSQEKQQIELENHQGYSQKLGEIIRSFQ 244

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           +RHGL+P G++  +TL  +N+    R+R + +N++R +         R V++NIP  ++E
Sbjct: 245 IRHGLEPDGIIGKNTLYWLNISRQERVRLMALNILRQQLWTMDNT--RKVIINIPDYTME 302

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             E  +    S VIVG+  R+TP+  +++N I+FNP W +P  I+++D++  +  D  YL
Sbjct: 303 YWEEDQKIFESKVIVGQTKRKTPLFSAQLNAIVFNPRWNVPTIIMREDILPKVLLDINYL 362

Query: 267 KDNNIHMIDE--KGKEVFVEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
             ++  +I+     K +  E ++W   +     +  RQ  G+ NA+   K    + N+ Y
Sbjct: 363 SRHSYEIIENYQSQKVIDAETINWKLITVHNFPYRLRQKSGENNALGLYKFNTPNNNSIY 422

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           +HDTP   LF    R  +SGC+RV+      ++L+ D   +            +T+ V L
Sbjct: 423 LHDTPAKNLFEKQDRAFSSGCIRVQKAEQFALFLM-DKSGYPLERYNIHHNVPETSSVSL 481

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             ++ V+ VY + W  +    QFR+DIY  D 
Sbjct: 482 KKKITVYSVYRTVWVDQFGFTQFRNDIYHYDK 513


>gi|94968926|ref|YP_590974.1| hypothetical protein Acid345_1899 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550976|gb|ABF40900.1| conserved hypothetical protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 561

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 108/382 (28%), Positives = 181/382 (47%), Gaps = 15/382 (3%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLR 115
            +   I    P  +      T +A+  Y  +  +    +LP  +  ++ G     +  L 
Sbjct: 183 DLTHTIAKVGPPFA--GYEATRQAMLQYTQLAKQPDTEKLPLPVGVVYQGGYYDHMPALA 240

Query: 116 ERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +RL   GDLDP       ++ +D  +   V  FQ RHGL   G + S T++A+N+P+  R
Sbjct: 241 KRLQQLGDLDPKVIILADAIKYDDPLMGGVAHFQSRHGLPNDGNLTSDTIDALNIPIADR 300

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRV-DRQTPI 230
           + QL++ L R + +   +     V+VN+P   L   +  G   L   V VG   D QTPI
Sbjct: 301 LEQLKLALERYRWI-RYQFTSPPVVVNVPEFKLFGYDGSGTQILSMGVNVGDAFDFQTPI 359

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD--- 287
               I  I+F PYW +  +I + +M+  + +D  YL+ N + ++D+ GK +    +    
Sbjct: 360 FEGDIRYIVFRPYWYVTPTIQRDEMVPSVEEDRTYLEQNEMEVVDKDGKVIASGAISDAV 419

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE-PILFNNVVRFETSGCVRV 346
               +  ++  RQ PG  NA+   KI F + +N Y+HDTPE   +F+   R  + GC+ +
Sbjct: 420 LKHLKNGSYSIRQRPGADNALGLVKIIFPNSHNVYLHDTPEFKTMFSKAPRALSHGCIHL 479

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               DL  WLL+D   WS   ++E ++     + V L   VP+  +Y++A +  +  +QF
Sbjct: 480 EKPADLAYWLLRDKTDWSLDKVKEAMQHGRDNSSVTLTKPVPILILYVTARAQTNGTVQF 539

Query: 406 RDDIYGLDNVHVGIIPLPEDHP 427
             DIYG D      +     +P
Sbjct: 540 FKDIYGHDVELKAALAKGYPYP 561


>gi|323492996|ref|ZP_08098133.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
 gi|323312775|gb|EGA65902.1| hypothetical protein VIBR0546_16236 [Vibrio brasiliensis LMG 20546]
          Length = 448

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 102/379 (26%), Positives = 180/379 (47%), Gaps = 14/379 (3%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
               S++         ++   ID+  P  S                              
Sbjct: 72  PPNSSLIATHRAIAQQQLGELIDAYTPDSS--GYMDLVDTYLHMVKYQKLNTPLYSQTGL 129

Query: 102 LHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +G+       L +RL I     LD  K +S  +D  +E+AVK FQ  HGL+  G++  
Sbjct: 130 AKVGDKLEQRDVLLQRLEIVDVNLLDVRKDVSW-YDRTLETAVKQFQRLHGLEADGIIGP 188

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T++ +N+P++ R+  L +N  R +    Q+     ++VN+P+  ++   +G+   +S V
Sbjct: 189 ETIKWINLPIEKRLAILAINAERNRYWPVQR--DTIIVVNVPSFQMKYWNSGQEVFQSKV 246

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
           +VG+  R TP++ ++++ ++ NP W +P  I+ +D++  ++QD +YL   NI +I + G 
Sbjct: 247 VVGKKARPTPVMMTKLDSLILNPTWNVPWKIMVEDIIPKVKQDREYLARQNIMIIPKWGS 306

Query: 280 --EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
              +  +E+DW++  P  F +R  Q  G+ NA+   K    +R   Y+HDTP   LF+  
Sbjct: 307 QEVINPDEIDWDNLNPHQFPYRMTQLSGQANALGLYKFNTPNRRAIYLHDTPSKGLFDET 366

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  +SGC+RV N       LL+          EE V       + L + +PVH +Y +A
Sbjct: 367 QRAFSSGCIRVENADVFADTLLQTQGLVIEQ--EEQVSPTPNQAIPLKSRIPVHIIYQTA 424

Query: 396 WSPKDSIIQFRDDIYGLDN 414
           W  ++  + +R+DIY LD 
Sbjct: 425 WY-EEGNVHYREDIYRLDR 442


>gi|254719057|ref|ZP_05180868.1| cell wall degradation protein [Brucella sp. 83/13]
          Length = 670

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +           +    P  ++   A
Sbjct: 254 LRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLARETDPSAYLRGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 430 LP-HDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 488

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 489 VPRSIILNEMLPKVMRDTSYLDRNGYEVYV-NGKKVSASAVNWSAVATGKAHIGIRQKPS 547

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 548 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 607

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 608 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|254420106|ref|ZP_05033830.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196186283|gb|EDX81259.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 520

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 100/421 (23%), Positives = 178/421 (42%), Gaps = 38/421 (9%)

Query: 20  LPMGLSLVEKPIHASVLDEI--INESYHSIVNDRFDNFLAR-VDMGIDSDIPIISKETIA 76
           L  G  L E  +    ++++  + ++   +     D      +    +   P        
Sbjct: 116 LAYGRVLAEGKVRPETVEDLWEMQKNRVDLPRGLSDALARNILLDWFEGLAPT--DIGYQ 173

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG-----L 130
                   Y+ + ++GGWP  P  P +    S   +  L +RL   GDL  + G      
Sbjct: 174 NLSAGYVRYRRLAAQGGWPAFPAGPTIEPNMSDRRIPALIDRLTAEGDLTAANGARLKTE 233

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
            + + + ++ AV+ FQ+RHGL   G + + T  +++   + R RQ+ +NL R + L ++ 
Sbjct: 234 GLTYGSELQQAVQGFQVRHGLGADGRIGTGTQRSLSASAEDRARQIALNLERRRWL-KRD 292

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    + VN  AA +   ++GK    + VIVG  + QTP L      ++ NP W +P SI
Sbjct: 293 VAPERIEVNTAAAIMVYWKDGKPVHSNRVIVGSAENQTPSLEKPFASVVANPPWYVPASI 352

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            +++++      P YL  N++++ +                        Q  G   A+  
Sbjct: 353 ARREILPKG---PAYLAANDMYVQNGT--------------------VIQRAGPKAALGY 389

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            K E       ++HDTP    FN  +R  + GCVRV+N ++    LL   P       + 
Sbjct: 390 VKFELRDSYAIFLHDTPSKAAFNLSMRQRSHGCVRVQNAVEFARLLLSPDP-VKLAQFDT 448

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII--PLPEDHPI 428
              TR+TT V    E+ V  +Y +A+      + FR+D+YG D+     +   +    P+
Sbjct: 449 AQDTRETTRVTTGREISVRLLYWTAFVDGQGRVAFREDVYGRDDKLAQALGIAVSLPKPV 508

Query: 429 D 429
           D
Sbjct: 509 D 509


>gi|261754930|ref|ZP_05998639.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|261744683|gb|EEY32609.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
          Length = 660

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 244 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 420 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 478

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 479 VPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 537

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 538 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 597

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 598 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|182677142|ref|YP_001831288.1| peptidoglycan binding domain-containing protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182633025|gb|ACB93799.1| Peptidoglycan-binding domain 1 protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 624

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 97/420 (23%), Positives = 160/420 (38%), Gaps = 39/420 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEII-NESYHSIVNDRFDNFLARVDMG---IDSDIPIISKET 74
           ++  G       I    + ++I      +  +    +  A        +    P   +E 
Sbjct: 226 VVAYGRQASGSRIDPHEIGKLIGARPEIADPSLILASVAAAGPEAGTILRGFNPQ--QEG 283

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLD---PSKGL 130
                  +   +          +P  P L +G     V  +R RL + G LD      G 
Sbjct: 284 YVALRDKLVAMRQERQPVARRLIPSGPPLRVGMRDPRVALIRARLSLDGKLDKGQTENGA 343

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSST--------LEAMNVPVDLRIRQLQVNLMR 182
           S  +D+ V  AV  FQ  +GL  SG++   T        L A  +   +    L  N+ R
Sbjct: 344 SEIYDSEVSMAVADFQRANGLPASGVLTPQTSAILSGARLSATPLSPHVEHEILA-NMER 402

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            + +    +G   + VN+P   +  +E  +V  R  V++G+ +  TPI    +  ++ NP
Sbjct: 403 WRWMP-HDLGHDRIEVNLPDFEVAVIEKDEVVSRHRVVIGKEETPTPIFSHVMQFLIVNP 461

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
           YW +P SI++K+M+  L  +P YL      +    G  V                 RQ P
Sbjct: 462 YWNVPASILKKEMLPKLAANPNYLHRLGYEVFKRDGHLV----------------VRQPP 505

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+   K  F +    Y+HDTP    F    R  + GCVRV         +L   P 
Sbjct: 506 GERNALGRIKFMFPNDYAVYLHDTPSKHYFEEDKRAFSHGCVRVDEPYHFAEAVLG--PK 563

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           WS   I+  +   K   + L   +P+H  Y +A   +   +   +D+YG        + L
Sbjct: 564 WSESRIKG-LFGEKERYITLPKPLPIHLEYFTATVDRFGHLHLSEDVYGYSQKVRIALGL 622


>gi|150396784|ref|YP_001327251.1| hypothetical protein Smed_1575 [Sinorhizobium medicae WSM419]
 gi|150028299|gb|ABR60416.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 631

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 92/373 (24%), Positives = 158/373 (42%), Gaps = 25/373 (6%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVSV 111
               V   I+S  P  ++       + +   +  +     P +   P   L  G S+  +
Sbjct: 252 ASGDVAALIESRNPKSAQ--FEALRQELERLRTQVEA--TPRVEIAPGTLLKPGESNPEL 307

Query: 112 QRLRE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             +    +L  S  L     +       +  +   +   V+ FQ  HGL   G+V  +++
Sbjct: 308 ANVIAGIKLKASDALKTEHAVVLAAYGGTPDYTPELVPVVEAFQKEHGLKADGIVGQASI 367

Query: 163 EAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            A+     +  +IR++++ + + + L +  +G RYV +N PA +    E G       V+
Sbjct: 368 RAITGGDTIGEKIRKIEIAMEQARWLPDG-LGDRYVFINQPAFTASYTEQGAEQFSMRVV 426

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG    QT      I  +  NPYW +P+SII  +M+  LR DP YL      +    G+ 
Sbjct: 427 VGSKANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRSDPGYLDRMGYQVEVG-GRV 485

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V    V+W          RQ P   NA+   KI F + +  YMHDTP    F    R  +
Sbjct: 486 VSSTAVNWYGSTNS-IAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALS 544

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GCVR+ +   +   +L      S   + E +   +   + ++ +VPV+  Y +AW  KD
Sbjct: 545 HGCVRLADPRRMAAAVL----GVSVDEVGEEISGGRNKALPVSAKVPVYVSYFTAWPNKD 600

Query: 401 SIIQFRDDIYGLD 413
             +++ +D+Y  D
Sbjct: 601 GTVEYFNDVYERD 613


>gi|306838973|ref|ZP_07471795.1| cell wall degradation protein [Brucella sp. NF 2653]
 gi|306405940|gb|EFM62197.1| cell wall degradation protein [Brucella sp. NF 2653]
          Length = 666

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +           +    P  ++   A
Sbjct: 250 LRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLARETDPSAYLRGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVYV-NGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|146280663|ref|YP_001170816.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
 gi|145568868|gb|ABP77974.1| putative periplasmic protein [Pseudomonas stutzeri A1501]
          Length = 495

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 110/393 (27%), Positives = 190/393 (48%), Gaps = 21/393 (5%)

Query: 30  PIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
            +    L +   E      +    D+    + + +     + +    A+   A+  Y+D+
Sbjct: 100 HLARGRLRQADIEPIWRSPDAPEADDRQRLLQIAVQGLADLPTAFDRARPPHAL--YRDL 157

Query: 89  LSR---------GGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            +            W  LP  P L  G        LRE L+       +  L + +D  +
Sbjct: 158 RAAYARQRQAALPAWRPLPSGPTLRPGMRDERSPLLRELLLAG--AGSTPALDLRYDDEL 215

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             AV+ FQ++HGL+  G+V ++TL A+NV    R+ QL++NL R++ +  + +  + +LV
Sbjct: 216 VEAVRGFQLQHGLEADGVVGAATLVALNVSPASRLDQLRINLERLRWI-SRDLEPQSLLV 274

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           +I  A L    +     ++   VGR  RQTP+L SRI+R+  NP W +P +I+++D + L
Sbjct: 275 DIAGARLIYFRDSCPFWQTRTQVGREARQTPLLKSRISRLTLNPTWTVPPTILKQDKLPL 334

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           +R+D  YL  + + +ID +G  V    VDW    P   + RQD G  N +    I F + 
Sbjct: 335 IREDIAYLARHQMRVIDAQGNAVDPYAVDW--ANPRGILLRQDAGPANPLGQVAIRFANP 392

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
            + Y+HDTP   LF    R  +SGCVRV + + L   LL++     R  +  ++++ +T 
Sbjct: 393 FSVYLHDTPSKPLFERAARAVSSGCVRVESALQLVDLLLEEDE---RDTVARLLQSGETH 449

Query: 379 PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             +LA + P+   Y +A +    + ++R DIY 
Sbjct: 450 EYRLARQTPILMAYWTADADDSGLPRYRPDIYK 482


>gi|149191672|ref|ZP_01869915.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
 gi|148834513|gb|EDL51507.1| hypothetical protein VSAK1_04600 [Vibrio shilonii AK1]
          Length = 548

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 14/318 (4%)

Query: 103 HLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LG++        L ERL  S     +      FD  ++ A++ FQ  +GL+  G++  +
Sbjct: 226 RLGDTLPQEAYLTLIERLSESNVF-ITAREDRYFDELLDLAIREFQTIYGLNDDGIIGPN 284

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+E +N     ++R L +N  R +   +Q+     ++VN+P   LE  + G+    S VI
Sbjct: 285 TIEWLNKSASDKLRILALNSERSRLWPQQR--ENIIVVNVPNFQLEYWDEGEERFESRVI 342

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK- 279
           VGR  RQTP+L ++++ ++ NP W +P  I+ KD++  ++Q+P YL    I +++     
Sbjct: 343 VGRASRQTPLLETKMDSLILNPTWNVPWKIMVKDIIPKVKQNPTYLFSQRIEILEGWNNQ 402

Query: 280 -EVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             +    +DW         +  RQ  G++NA+   K    +    ++HDTP   LF+  +
Sbjct: 403 ARIDPTMIDWQEVNARRFPYRMRQQAGELNALGQYKFNTPNAQAIFLHDTPSKHLFDESL 462

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGCVRV +       LL+         +E+V   R    + L   +PVH +Y +AW
Sbjct: 463 RAFSSGCVRVEHADQFAQVLLEAQGK----TLEDVATDRPNKAIALKQRIPVHIIYQTAW 518

Query: 397 SPKDSIIQFRDDIYGLDN 414
              D    FR D+Y  D 
Sbjct: 519 M-SDGKAHFRGDVYQYDA 535


>gi|54309518|ref|YP_130538.1| hypothetical protein PBPRA2351 [Photobacterium profundum SS9]
 gi|46913954|emb|CAG20736.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 572

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 166/365 (45%), Gaps = 17/365 (4%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLII 120
            + S  P+   +   +   A+   + +     WP       + LG+       L   L  
Sbjct: 198 FVTSLKPV--NDNYNKMILAMQTLE-VSESEHWPGFYQQGIIRLGDRLKDPDSLITILER 254

Query: 121 SGDLDPSKGLSVA------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            GD+       +           +   VK FQ RHGL   G++   T   + +    RIR
Sbjct: 255 MGDITEYDADRMRTSQLRSLTIPLSLGVKTFQKRHGLKVDGVIGPKTRYWLAITPKERIR 314

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
            L +N  R++    +      ++VNIP   L    + K    S VIVGR  R+TP++ SR
Sbjct: 315 VLALNAQRVRLWPAEY--NSVLIVNIPGYELNLWLDNKHVFDSKVIVGRPSRRTPLISSR 372

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPE 292
           +N ++FNPYW +P+SI++KD++   R+D  YL  +N  +I       ++ +  +  +   
Sbjct: 373 VNSVVFNPYWNVPKSIMRKDILPKARRDRSYLYRHNYAVIRSWNSSEQIPIHTIHPSMLY 432

Query: 293 P--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  RQ PG  NA+   K    + N+ Y+HDTP   LFN   R  +SGCVRV N  
Sbjct: 433 AKTFPYRLRQKPGNKNALGLYKFIIPNDNSIYLHDTPAKSLFNKDDRAFSSGCVRVENAD 492

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L + LL +    +     E+   ++T  + L  +V VH +Y +AW     ++ FRDD+Y
Sbjct: 493 VLALILL-NYSGVTDQRFYELSGRKQTKTIGLRNKVKVHLIYQTAWVDDGGLVNFRDDVY 551

Query: 411 GLDNV 415
             D V
Sbjct: 552 LYDKV 556


>gi|86748553|ref|YP_485049.1| hypothetical protein RPB_1428 [Rhodopseudomonas palustris HaA2]
 gi|86571581|gb|ABD06138.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 718

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 173/434 (39%), Gaps = 45/434 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLA--RVDMGIDSDIPIISKETI 75
           ++          +H S     I    H     D   +          + S  P       
Sbjct: 247 MMDYARQAQSGRMHWSQAGSDIQYPEHPIDPADVLASVTTAKDASAALGSYNPPH--RLY 304

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLD 125
            + +K +A  +         I        +P R     +      V +LR +L I+ D  
Sbjct: 305 KELKKKLAELRGESDGPVLKIAEGETLKFVPARKKQAAVTMDDPRVPQLRAKLGITED-- 362

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
                S  +DA V  AV+ FQ    L P+G++D  T++A+N P   R I  + VN+ R +
Sbjct: 363 ---ADSTTYDAKVAEAVRKFQRGADLKPTGILDDRTVKALNTPKRDRTIDTIMVNMERWR 419

Query: 185 KLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIM 239
            L  Q     +G  YV++N+P  +L+ + NG     + V++G+     TP+L   +  I 
Sbjct: 420 WLPRQLGAASLGDAYVILNVPDYTLKLMHNGAQVWTTRVVIGKPGKHATPLLTETMKYIT 479

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W +P SII  + +  L QDP  L    + M   +                 +    
Sbjct: 480 VNPTWNVPPSIINNEYLPALAQDPTVLDRMGLKMSRNRD---------------GSIHIS 524

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK- 358
           Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL  
Sbjct: 525 QPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDQYAAALLNI 584

Query: 359 --DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
                 ++   I   +  R    +   T +PV+  Y +A+   D  +Q R D+YG D   
Sbjct: 585 AMPDKDYTPAKIRS-MYGRSEVNLNFPTPIPVNITYQTAFVDDDGKLQLRKDVYGRDARM 643

Query: 417 VGIIPLPEDHPIDS 430
           + ++   +   +++
Sbjct: 644 LALLKNDKGKNLEA 657


>gi|265984050|ref|ZP_06096785.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|264662642|gb|EEZ32903.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
          Length = 660

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +           +    P  ++   A
Sbjct: 244 LRYAVDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLARETDPSAYLRGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 420 LP-HDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 478

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 479 VPRSIILNEMLPKVMRDTSYLDRNGYEVYV-NGKKVSASAVNWSAVATGKAHIGIRQKPS 537

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 538 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 597

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 598 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|163843230|ref|YP_001627634.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673953|gb|ABY38064.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 510

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 94  LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 151

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 152 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 209

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 210 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 269

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 270 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 328

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 329 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 387

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 388 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 447

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 448 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|161618916|ref|YP_001592803.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|161335727|gb|ABX62032.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
          Length = 510

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 99/411 (24%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 94  LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 151

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 152 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRDVLA 209

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 210 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 269

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   +++I  ++FNP W 
Sbjct: 270 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKIQTVVFNPSWG 328

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 329 VPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 387

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 388 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 447

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 448 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|328543832|ref|YP_004303941.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326413576|gb|ADZ70639.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 639

 Score =  308 bits (790), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 103/428 (24%), Positives = 172/428 (40%), Gaps = 24/428 (5%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDN--FLARVDMGIDSDIPIISKETI 75
           +L   L      +  + +    +       +  +         V+  ++S  P    E  
Sbjct: 218 VLTYMLDAGRGRVDPNRISGYHDLPRRKIDLVAQIHGLQAAGNVEAFLESRQPQ--GEHF 275

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS----VQRLRERLIISGDLDPSKGL 130
                 +A  +     G   ++     L  G  S      V  +R+    +   D +  L
Sbjct: 276 KALVAELAALRG-AQEGERIQISLATLLKPGTDSAELANIVAAIRKNGSEALKADHAAIL 334

Query: 131 S-----VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMRIK 184
           S       +   +   VK FQ  + L P G+V  +T+ A+       +I +L++ L R +
Sbjct: 335 SAYDGGTLYGPELVDLVKAFQKENRLTPDGIVGKATIRALVGDSNADKIAKLELALERSR 394

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L  + +G R V +N PA +   VE+GK  L   V+VG    QT   + +I  + +NPYW
Sbjct: 395 WLP-EDLGSRRVFINQPAFTATYVESGKAPLAMRVVVGTKANQTSFFYDQIETVEYNPYW 453

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDP 302
            +P SII  + +  L  DP YL      +    GK +    VDW++          RQ P
Sbjct: 454 GVPYSIIVNEKLPKLAADPGYLDKIGYEVTTASGKPIPSASVDWHAVATKKLSVNVRQRP 513

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  NA+   KI F +++  YMHDTP   LFN  VR  + GCVR+ +   +   +L     
Sbjct: 514 GSDNALGELKILFPNKHAIYMHDTPSKSLFNKDVRAFSHGCVRLSDPRAMAAAVL----G 569

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            S+ ++   +   K     +   +PV+  Y +AW   D  I +  D+Y  D      +  
Sbjct: 570 KSKDYVASRIAGGKNESEDVTGVIPVYVAYFTAWPETDGTIGYYGDVYDRDMYLTRALEA 629

Query: 423 PEDHPIDS 430
                + +
Sbjct: 630 TRKTRLQA 637


>gi|227822250|ref|YP_002826221.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
 gi|227341250|gb|ACP25468.1| peptidoglycan binding protein, putative [Sinorhizobium fredii
           NGR234]
          Length = 630

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 161/409 (39%), Gaps = 22/409 (5%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVN--DRFDNFLARVDMGIDSDIPIISKETIA 76
           +L      V   I  + +    ++     V+     D      D+    +          
Sbjct: 211 VLTYVQDTVRGRIDPNKISGY-HDFKRKSVDLVAFLDKAATSADVAALIEERNPKSPQFL 269

Query: 77  QTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRE--RLIISGDLDPSKGL--- 130
             ++ +   +         E+ P   L  G+++  +  +    +L  S  L     +   
Sbjct: 270 ALKQELERLRAETDAAPRVEIAPGTLLKPGDNNPELANIVAGIKLKASEALKAEHAVVLA 329

Query: 131 ----SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIK 184
               +  +   + S V+ FQ  HGL   G+V  +++  +        +I +L++ + + +
Sbjct: 330 GYQGTPEYTPELVSLVEAFQKEHGLKADGVVGQASIRVLTGGDTTASKIDKLEIAMEQAR 389

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L    +G RYV +N PA      ++G       V+VG    QT   H  I  +  NPYW
Sbjct: 390 WLPN-DLGNRYVFINQPAFMAYYTDHGAEQFSMRVVVGSKANQTYFFHDEIQTVEVNPYW 448

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P+SII  +M+  LR DP YL      +    G+ V    VDW          RQ P  
Sbjct: 449 GVPQSIIVNEMLPKLRSDPSYLDRMGYQVEVG-GRVVPSYAVDWYGSTNS-VAVRQPPSS 506

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            NA+   KI F + +  YMHDTP    F    R  + GCVR+     +   +L      S
Sbjct: 507 DNALGELKILFPNSHAIYMHDTPSKSFFKRDQRALSHGCVRLAEPRRMAAAVL----GVS 562

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +   +   +   + +  +VPV+  Y +AW  KD  +++ +D+Y  D
Sbjct: 563 MDDVGNEIAQGRNRALPVPQKVPVYVSYFTAWPNKDGKVEYFNDVYERD 611


>gi|307946894|ref|ZP_07662229.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307770558|gb|EFO29784.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 681

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 93/422 (22%), Positives = 177/422 (41%), Gaps = 21/422 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L   L      I  + L E  ++   + V+        +    +   +     +    +
Sbjct: 259 VLTYILDAERGRIDPNRLSEY-HDLPRAEVDLVASLRDVQASTDVKVAMKAHQPQDDVFS 317

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG---------DLDP 126
           + +  +A  +          +     L +G SS  V+ +   +  +G          L  
Sbjct: 318 ELQSELAKLRAEDEEEDAIVIAPGTFLKVGRSSPEVKNIVAAIRKNGSDALREKHMKLLV 377

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKK 185
           S      +   + + VK FQ  + L   G+V  +T+ AM       +I ++++ + R + 
Sbjct: 378 SYTGENLYSQEIANLVKGFQKENKLAADGIVGKNTIRAMVGETNAAKIAKIELAMERRRW 437

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L ++ +G R V +N PA +    E   + L   V+VG+   QT   +  +  + +NPYW 
Sbjct: 438 LPDE-LGERRVFINQPAFTATFYEGSSLPLSMRVVVGKKSNQTNFFYDNVEIVEYNPYWG 496

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPG 303
           +P SII  +M+  L  +P YL      +    G++V    V+W +          RQ PG
Sbjct: 497 VPYSIIVNEMIPKLAANPYYLDQAGYEVTTPSGRKVSSANVNWYAVASRQQSINVRQYPG 556

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   KI F ++++ YMHDTP   LFN   R  + GCVR+ +   +   +L      
Sbjct: 557 AKNALGVVKILFPNKHHIYMHDTPAKSLFNKDTRAYSHGCVRLHDPKAMAAAVL----GK 612

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           S+ ++ + +   K    ++  ++PV+  Y +AW      +++  D+Y  D   +  +   
Sbjct: 613 SKDYVSQQIAKGKNRQERVEGDLPVYVSYFTAWPNDAGQVEYFADVYDRDRHLLKALKKT 672

Query: 424 ED 425
           +D
Sbjct: 673 DD 674


>gi|265994887|ref|ZP_06107444.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262766000|gb|EEZ11789.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 538

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 122 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 179

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 180 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 238 AHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 297

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 298 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 356

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 357 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 415

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 416 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 475

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|260563978|ref|ZP_05834464.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|265991052|ref|ZP_06103609.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|260153994|gb|EEW89086.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|263001836|gb|EEZ14411.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 538

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 122 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 179

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 180 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 238 AHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 297

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 298 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 356

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 357 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 415

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 416 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 475

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|256113506|ref|ZP_05454340.1| cell wall degradation protein [Brucella melitensis bv. 3 str.
           Ether]
          Length = 531

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 115 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 172

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 173 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 230

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 231 AHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 290

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 291 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 349

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 350 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 408

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 409 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 468

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|90425452|ref|YP_533822.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB18]
 gi|90107466|gb|ABD89503.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB18]
          Length = 730

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 175/434 (40%), Gaps = 46/434 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFD--NFLARVDMGIDSDIPIISKETI 75
           +L          +H S +   I    H     +        A     + S  P    +  
Sbjct: 260 MLDYARQAQSGRMHWSQVSGDIQYPEHPIDPAEVLANVTAAADPSAALASYNPPH--KMY 317

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LH----------LGNSSVSVQRLRERLIISGDL 124
            Q +  +A  +      G  ++   P L           +      V +LR +L I    
Sbjct: 318 RQLKAKLAELRGQGDGPGAIQIAEGPALKYIPARKKQAAVEVDDPRVPQLRAKLGI---- 373

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRI 183
                 S  +DA V +AV+ FQ    L  +G++D  T+ A+N P   R I  + VN+ R 
Sbjct: 374 -SENPDSTRYDAKVAAAVRKFQDSADLKETGVLDERTVTALNSPKSDRQIDTVIVNMERW 432

Query: 184 KKLL----EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-TPILHSRINRI 238
           + L        +G  YV++NIP  +L+ +++G     + V+VG+     TP+L   +  I
Sbjct: 433 RWLPRVLGAPSLGDAYVILNIPDYTLKVMQHGAPVWTTRVVVGKPGNHATPLLTETMKYI 492

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W +P SII  + +  L+QDP  L    + +   +                 +   
Sbjct: 493 TVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRD---------------GSIHI 537

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q PG+ NA+   +  F ++   Y HDTP+  LF+   R  + GC+RV+N       LL 
Sbjct: 538 SQPPGERNALGRIRFNFPNKFLVYQHDTPDKNLFSRDARAFSHGCMRVQNPDQYAATLLN 597

Query: 359 ---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                  ++   I   +  +    +K AT +PV+  Y +A+      +Q R D+YG D  
Sbjct: 598 IAMPNERYTPEKIRG-MYGKSEIDLKFATPIPVNLTYQTAFVDDAGKLQTRKDVYGRDAA 656

Query: 416 HVGIIPLPEDHPID 429
            + I+  P+   ++
Sbjct: 657 MLAILRNPKGKDLE 670


>gi|23501845|ref|NP_697972.1| hypothetical protein BR0962 [Brucella suis 1330]
 gi|23347781|gb|AAN29887.1| conserved hypothetical protein [Brucella suis 1330]
          Length = 572

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 156 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 213

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 214 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRDVLA 271

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 272 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 331

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 332 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 390

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 391 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 449

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 450 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 509

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 510 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|217978718|ref|YP_002362865.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217504094|gb|ACK51503.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 629

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 167/409 (40%), Gaps = 27/409 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMGIDSDIPIISKE-TIA 76
           I+          +    +  +I      +  +               + +     +    
Sbjct: 241 IVSYARQASGARVDPRQISALIGLRPEVADPSVALATVSTAGQNAGAALLAFNPPQPAYQ 300

Query: 77  QTEKAI-AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
                +    +          +P  P L +G     V  +R RL + G     +  ++ +
Sbjct: 301 ALRAKLNETRRAAAPVARAAAIPTGPTLKVGMRDPRVPLIRSRLSLDG--REGEPENLVY 358

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR-QLQVNLMRIKKLLEQKMGL 193
           D  V SAV  FQ  +GL  SG +++ T+  ++     R+  ++  N+ R + +  + MG 
Sbjct: 359 DTQVASAVADFQKANGLPGSGQLNARTIALLSGGDQSRVEAEILANMERWRWMP-RDMGE 417

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + VNIP   +  +ENG V  ++ V+VG+ D  TP+  + +  ++ NPYW +P+SII+K
Sbjct: 418 SRIEVNIPDYEVSVIENGAVISQNRVVVGKEDTPTPVFSNTMQFLIVNPYWTVPQSIIRK 477

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +MM  +  DP YL       + + GK                   RQ PG+ NA+   K 
Sbjct: 478 EMMPKIAADPNYLHRMGYEAVWKNGK----------------LGVRQPPGERNALGRIKF 521

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            F +    Y+HDTP   LF    R  + GCVRV +       +L     WS   +++++ 
Sbjct: 522 MFPNDYAVYLHDTPSRALFEQHKRAFSHGCVRVDDPFRFAQSVLG--KGWSEERVQKLI- 578

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             K   V LA  +P+H  Y +A       +Q  +DIYG        + L
Sbjct: 579 GGKERYVHLAKPLPIHLEYFTAKVDPYGQLQLSEDIYGFSRKVRAALGL 627


>gi|17987297|ref|NP_539931.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
 gi|256044628|ref|ZP_05447532.1| cell wall degradation protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|17982976|gb|AAL52195.1| cell wall degradation protein [Brucella melitensis bv. 1 str. 16M]
          Length = 531

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 115 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 172

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 173 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 230

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 231 AHADASVYDPELVSAIKDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 290

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 291 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 349

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 350 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 408

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 409 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 468

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|239831842|ref|ZP_04680171.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239824109|gb|EEQ95677.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 670

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 96/424 (22%), Positives = 172/424 (40%), Gaps = 21/424 (4%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQT 78
           L   +   E  + A  L    +   + +        LA                E  A  
Sbjct: 254 LRYAIDAGEGRVIADRLSGFHDLPRNRVDPKAVLEKLASESDPAAYLHGFQPDNEQYAAL 313

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVS---VQRLRERLIISGDLDP------SKG 129
           +  +A  +   +      L    +  G+++     V  L  R   +  L        +  
Sbjct: 314 KSELANTEPPSAEPIRISL-NGVIKPGDANPQLGKVVALISRHAPASYLAEHRQVLDAHA 372

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLE 188
               +D  + +A+K +Q   G  P G++  +TL A+      ++  ++  ++ R++ L  
Sbjct: 373 NGDVYDPELVAAIKDYQKLSGSTPDGVIGRNTLSALQGEQSSIKRDRILYSMERLRWLP- 431

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
              G RYV+VN PA   E  E+GK  L   V++G    QT   ++++  ++FNP W +PR
Sbjct: 432 HDFGTRYVMVNQPAYRAEYFEDGKEKLAMNVVIGSPSHQTYFFYNKVQTVVFNPSWGVPR 491

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKIN 306
           SII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P   N
Sbjct: 492 SIILNEMLPKVMRDTSYLDRNGYEVY-ADGKKVSASAVNWSAVAAGKAHVGIRQKPSLDN 550

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   KI F + ++ YMHDTP    F+  +R  + GC+R+    D+   ++  T      
Sbjct: 551 ALGELKILFPNSHDIYMHDTPAKSYFSRDMRALSHGCIRLERPRDMAAAVMGTTVQDLDK 610

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
           +       +    +K+   VPV+  Y +AW      I++  D+Y  D+          D 
Sbjct: 611 YF-----GKNERGIKVKEPVPVYISYFTAWPDASGQIRYYGDVYDRDSGLQKAFDKTADS 665

Query: 427 PIDS 430
            + +
Sbjct: 666 RLAA 669


>gi|256369387|ref|YP_003106895.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
 gi|255999547|gb|ACU47946.1| hypothetical protein BMI_I960 [Brucella microti CCM 4915]
          Length = 572

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 156 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 213

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 214 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 271

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 272 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 331

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 332 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 390

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 391 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 449

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 450 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 509

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 510 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 555


>gi|209694858|ref|YP_002262786.1| hypothetical protein VSAL_I1327 [Aliivibrio salmonicida LFI1238]
 gi|208008809|emb|CAQ79012.1| putative exported protein [Aliivibrio salmonicida LFI1238]
          Length = 512

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/393 (26%), Positives = 184/393 (46%), Gaps = 19/393 (4%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
             LD  I +    ++     +F       + + +   SK+        +  Y D   +  
Sbjct: 121 GRLDNNIGKPSLFLIEKVNQHFEDDTLTALVNQLKPQSKQ-YQDLYTRLYRYYDPYHQEA 179

Query: 94  WPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPS------KGLSVAFDAYVESAVKLF 145
                 R L        +    L  RL ISG+L+              ++  + + VK F
Sbjct: 180 PKLYSSRLLKPNQ---DIPYKSLVYRLQISGELNEEQIHYFLSQEGDKYNNELVNVVKSF 236

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q RHGL   G+V   TL  +N+  + R+R + +N+ R++    +    R+VLVNIP+  +
Sbjct: 237 QKRHGLVVDGIVGKRTLYWLNMSANERVRIMALNIQRLRLW--ENKNARFVLVNIPSYEM 294

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                G++  +S VIVG+ +R+TP+  +R++ I+FNP W +P  I+++D++    ++  Y
Sbjct: 295 GYWLKGELVFKSKVIVGKPERKTPLFTTRLDSIVFNPNWKVPTKIMKEDILPKALENQDY 354

Query: 266 LKDNNIHMIDEK--GKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNT 321
           L  +N  ++      + +  E ++W +   +   +  RQ  G  NA+   K    +RN  
Sbjct: 355 LLTHNYEVLPSWLSDEVIPFESIEWETMTVDNFPYKLRQKSGNANALGRYKFNTPNRNAI 414

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           Y+HDTP   LFN   R  +SGC+RV    +    L+K++  ++        +  KT  V 
Sbjct: 415 YLHDTPSRSLFNKQHRAYSSGCIRVEKASEFAQLLMKES-HFTAKDYAGYHRLPKTNTVG 473

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           L+ ++ V+ +Y +AW  +   IQFR+D+Y  D 
Sbjct: 474 LSQKIAVYTIYQTAWVDEADTIQFRNDVYRYDE 506


>gi|90414498|ref|ZP_01222473.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
 gi|90324406|gb|EAS40968.1| hypothetical protein P3TCK_00890 [Photobacterium profundum 3TCK]
          Length = 572

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 104/365 (28%), Positives = 164/365 (44%), Gaps = 17/365 (4%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLII 120
            + S  P+   +   +   A+   +       WP       + LG    +   L   L  
Sbjct: 198 FVTSLKPV--NDNYNKMILAMQALEA-SESEHWPGFYQQGIIRLGGRLNNPDSLITILER 254

Query: 121 SGDLDPSKGLS------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            GD+                   +   VK FQ RHGL   G++   T   + +    RIR
Sbjct: 255 MGDITEYDADRMRASQLRTLTIPLSLGVKTFQKRHGLKVDGVIGPKTRYWLAITPKERIR 314

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
            L +N  R++    +      ++VNIP   L    + K    S VIVGR  R+TP++ SR
Sbjct: 315 VLALNAQRVRLWPAE--HNSVLIVNIPGYDLNLWLDNKHVFDSKVIVGRPSRRTPLISSR 372

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSPE 292
           +N ++FNPYW +P+SI++KD++   R+D  YL  +N  +I       ++ +  +  +   
Sbjct: 373 VNSVVFNPYWNVPKSIMRKDILPKARRDRSYLYRHNYAVIRSWNSSEQIPIHTIHPSMLY 432

Query: 293 P--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  RQ PG  NA+   K    + ++ Y+HDTP   LFN   R  +SGCVRV N  
Sbjct: 433 AKTFPYRLRQKPGNKNALGLYKFNIPNDDSIYLHDTPAKSLFNKDDRAFSSGCVRVENAD 492

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L + LL +    +     E+   +KT  + L  +V VH +Y +AW     ++ FRDD+Y
Sbjct: 493 VLALILL-NYSGVTEQRFYELSGRKKTKTIGLRNKVQVHLIYQTAWVDDGGLVNFRDDVY 551

Query: 411 GLDNV 415
             D V
Sbjct: 552 LYDKV 556


>gi|306840472|ref|ZP_07473231.1| cell wall degradation protein [Brucella sp. BO2]
 gi|306289487|gb|EFM60705.1| cell wall degradation protein [Brucella sp. BO2]
          Length = 666

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 100/409 (24%), Positives = 169/409 (41%), Gaps = 23/409 (5%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQT 78
           L   +   E  I A  L    +     +        LAR                  A  
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARETDPSAYLHGFQPDNAQYAAL 309

Query: 79  EKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDPSK 128
           ++A+A       RG    +     +  G+ S     V  L  R      L    D+  + 
Sbjct: 310 KRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLAAH 367

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLL 187
             +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ L 
Sbjct: 368 ADARVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRWLP 427

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W +P
Sbjct: 428 -HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWGVP 486

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKI 305
           RSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P   
Sbjct: 487 RSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPSLD 545

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +     
Sbjct: 546 NSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKNLD 605

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
            +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 606 KYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|225627441|ref|ZP_03785478.1| cell wall degradation protein [Brucella ceti str. Cudo]
 gi|254706835|ref|ZP_05168663.1| cell wall degradation protein [Brucella pinnipedialis M163/99/10]
 gi|254714056|ref|ZP_05175867.1| cell wall degradation protein [Brucella ceti M644/93/1]
 gi|254716887|ref|ZP_05178698.1| cell wall degradation protein [Brucella ceti M13/05/1]
 gi|225617446|gb|EEH14491.1| cell wall degradation protein [Brucella ceti str. Cudo]
          Length = 670

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 488

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 489 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 547

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 548 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 607

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 608 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|256254952|ref|ZP_05460488.1| cell wall degradation protein [Brucella ceti B1/94]
          Length = 670

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 488

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 489 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 547

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 548 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 607

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 608 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 653


>gi|254701720|ref|ZP_05163548.1| cell wall degradation protein [Brucella suis bv. 5 str. 513]
 gi|261752272|ref|ZP_05995981.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261742025|gb|EEY29951.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
          Length = 634

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 218 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 275

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 276 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 333

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 334 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 393

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 394 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 452

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 453 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 511

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 512 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 571

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 572 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|260168681|ref|ZP_05755492.1| cell wall degradation protein [Brucella sp. F5/99]
          Length = 666

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|256159684|ref|ZP_05457437.1| cell wall degradation protein [Brucella ceti M490/95/1]
          Length = 666

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 649


>gi|225852468|ref|YP_002732701.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|225640833|gb|ACO00747.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
          Length = 510

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 94  LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 151

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 152 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 209

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 210 AHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 269

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 270 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 328

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 329 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 387

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 388 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 447

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 448 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 493


>gi|261253179|ref|ZP_05945752.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
 gi|260936570|gb|EEX92559.1| hypothetical protein VIA_003204 [Vibrio orientalis CIP 102891]
          Length = 517

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/379 (25%), Positives = 177/379 (46%), Gaps = 12/379 (3%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
               + +  +       +   I+   P    +                     P   +  
Sbjct: 141 PPQSAQIALKRGISQQHLAELIERYTP--DSQEYQYLIDTYLHIIKFDKLNTPPYRQVGI 198

Query: 102 LHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             +G+   +   L +RL I   DL   +     FD  ++ AVK FQ  HGL P G++   
Sbjct: 199 KRVGDRLENRDVLIQRLSIVDVDLIDVRKDIRWFDQTLKVAVKQFQNLHGLKPDGIIGPE 258

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T++ +N+P++ R+  L +N  RI+    Q+     ++VN+P+  +    +G+    S V+
Sbjct: 259 TIKWINLPIEKRLSTLAINAERIRYWPSQR--DTIIVVNVPSFQMTYWSSGEEVFESKVV 316

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK- 279
           VG+++R TP++  R++ ++ NP W +P  I+ +D++  ++ D  YL   NI +I + G  
Sbjct: 317 VGKIERPTPLMQIRLDSLILNPTWNVPWKIMVEDIIPKVQHDRAYLTKQNIKIIPKWGSD 376

Query: 280 -EVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
             +  E +DW++  P +F +R  Q+ G  NA+   K    +R   ++HDTP   LF+   
Sbjct: 377 EIINPETIDWDNLNPSSFPYRMTQESGNSNALGLYKFNTPNRRAIFLHDTPSKSLFSRQQ 436

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  +SGC+RV N       L++      R  ++E         + L + VPVH +Y +AW
Sbjct: 437 RAFSSGCIRVENADVFAKRLIEAQGVSRRAKLDE--PPGPNQSIPLKSRVPVHIIYQTAW 494

Query: 397 SPKDSIIQFRDDIYGLDNV 415
             ++  + +R+DIY LD  
Sbjct: 495 Y-EEGSVHYREDIYRLDKA 512


>gi|260566489|ref|ZP_05836959.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|260156007|gb|EEW91087.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
          Length = 634

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 98/411 (23%), Positives = 171/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 218 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 275

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 276 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPANYLAQHRDVLA 333

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 334 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 393

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 394 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 452

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 453 VPRSIILNEMLPKVMRDTSYLDRNGYKVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 511

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 512 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 571

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 572 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|261218691|ref|ZP_05932972.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|260923780|gb|EEX90348.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
          Length = 660

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 244 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 420 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 478

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 479 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 537

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 538 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 597

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 598 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|265998101|ref|ZP_06110658.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|262552569|gb|EEZ08559.1| peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
          Length = 660

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 244 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 420 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 478

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 479 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 537

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 538 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 597

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 598 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 643


>gi|265999484|ref|ZP_05466569.2| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|263094225|gb|EEZ18102.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 538

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 122 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 179

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 180 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 238 AHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 297

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 298 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 356

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 357 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 415

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 416 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 475

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 476 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 521


>gi|326408985|gb|ADZ66050.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M28]
 gi|326538698|gb|ADZ86913.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 531

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 96/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 115 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 172

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 173 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 230

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA++ +Q   G    G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 231 AHADASVYDPELVSAIQDYQKLSGGTLDGLIGRATISALQGEQTSIRRDRILYSMERLRW 290

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 291 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 349

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 350 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 408

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 409 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 468

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 469 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 514


>gi|254507080|ref|ZP_05119218.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
 gi|219550075|gb|EED27062.1| cell wall degradation protein [Vibrio parahaemolyticus 16]
          Length = 517

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 84/295 (28%), Positives = 150/295 (50%), Gaps = 9/295 (3%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL   +     +D  +  A+K FQ  HGL   G++   T + +NV +  R+  L +N  R
Sbjct: 221 DLANVRRDVTYYDMSLVPAIKQFQKLHGLKEDGVIGPETAKWLNVSMKDRLTTLALNAER 280

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           I+           ++VN+P+  +     GK    S V+VGR  R TP++ + ++ ++ NP
Sbjct: 281 IRYWPSD--KDTIIVVNVPSYEMTYWHGGKNVFESKVVVGRQARPTPLMITNLDTLILNP 338

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR- 299
            W +P  I+ +D++  +++DP+YL   +I ++ + G +  +  +++DW++  P +F +R 
Sbjct: 339 TWNVPWKIMVEDIIPKMKEDPEYLTRQHIEILPKWGSKERIDPQQIDWDAMNPKSFPYRM 398

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q  G  NA+   K    ++   Y+HDTP   LFN   R  +SGC+RV +       LL+
Sbjct: 399 TQLSGNQNALGLYKFNTPNKRAIYLHDTPSKGLFNEPQRAFSSGCIRVEHADVFASRLLE 458

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                ++  +      R    + L   +PVH +Y +AW  ++    +R+DIY LD
Sbjct: 459 HQ-GLTKSKL-SAEADRSNKKIPLRKRIPVHIIYQTAWF-EEGKTHYREDIYQLD 510


>gi|260772914|ref|ZP_05881830.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
 gi|260612053|gb|EEX37256.1| hypothetical protein VIB_001376 [Vibrio metschnikovii CIP 69.14]
          Length = 512

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 91/392 (23%), Positives = 169/392 (43%), Gaps = 16/392 (4%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             L+ I+     S    R    +A     +   +   + +     Q   A  F   + + 
Sbjct: 130 GKLNRILPLPSASS---RLALSVAAGTPAMADLVLQHAPQDPAYHQLVYAYGFLSALKTT 186

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHG 150
                        G+       L +RL +   D+   +     +D  +   +K FQ  HG
Sbjct: 187 PLPVYRQAGLKRPGDKLDDRPTLIQRLALVNIDVTVIRDDVSWYDNSLIEPIKHFQQLHG 246

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L+  G++   TL+ +N+ V+ R+  + +N  R++           ++VN+P+  L+    
Sbjct: 247 LNADGVIGPQTLKWLNLSVEERLGLIALNAERMRLWPTSN---TSIVVNVPSFELKYWHA 303

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G+   +S V+VGR+ R TP++ +R++ ++ NP W IP  I+ +D++ + ++D +YL   N
Sbjct: 304 GENVFQSKVVVGRISRPTPVMTTRLDSLIVNPTWNIPYKIMVEDILPMAKRDLRYLDRQN 363

Query: 271 IHMIDEKG--KEVFVEEVDWNSPE--PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
           + ++   G  + +    +DW +       +  RQ  G  NA+   K    +R   ++HDT
Sbjct: 364 LEILPRWGATQTLDPTSIDWENISLEAFPYRMRQRAGYHNALGLYKFNTPNRRAIFLHDT 423

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           P   LF    R  +SGC+RV +       LL      S+    +   +     + L   +
Sbjct: 424 PSKYLFERDSRAFSSGCIRVEHADQFANMLLTKQGLDSQQFAPQ--SSSVNQAIPLRQRI 481

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
           PV  +Y +AW      + FR+DIY LD +   
Sbjct: 482 PVQIIYQTAWYDA-GQLHFREDIYRLDKLVTQ 512


>gi|241767412|ref|ZP_04765115.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
 gi|241361827|gb|EER58083.1| ErfK/YbiS/YcfS/YnhG family protein [Acidovorax delafieldii 2AN]
          Length = 322

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 94/310 (30%), Positives = 151/310 (48%), Gaps = 8/310 (2%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL         +D  +++ VK FQ RH L   G++   TL+A+ VP   R RQ+++ + R
Sbjct: 1   DLPADARPPALYDEALQNGVKAFQERHALATDGVIGKGTLDALAVPPAARARQIELAMER 60

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVE--NGKVGLR--STVIVGRV-DRQTPILHSRINR 237
           ++     + G R ++VNIP   L A E  NG+V L+    VIVG+  D +TP+    +  
Sbjct: 61  LRWTPLLR-GPRMIVVNIPEFVLRAYEVHNGQVSLQLAMKVIVGKALDTRTPLFDEDMRF 119

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD-WNSPEPPNF 296
           I F+PYW +P SI + + +  LR+DP Y     +  +   G+       +  ++      
Sbjct: 120 IEFSPYWNVPPSIARSETIPRLRRDPGYFDQQGLEFVGANGQVHTALAAEHLDAVLRGQM 179

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  NA+   K  F + +N Y+H TP P LF    R  + GCVRV + + L  ++
Sbjct: 180 RIRQRPGPKNALGDIKFVFPNNSNIYLHHTPAPALFQRDRRDFSHGCVRVEDPVALAQFV 239

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L++ P W    I E +   ++  ++LA  +PV   Y +A   K     F  D+YG D + 
Sbjct: 240 LRNDPAWPEPRIREAMARGQSATLRLAEPLPVVIAYSTAIV-KQGKPHFFADLYGQDKLL 298

Query: 417 VGIIPLPEDH 426
              +    + 
Sbjct: 299 DQALRQQSER 308


>gi|269102554|ref|ZP_06155251.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162452|gb|EEZ40948.1| hypothetical amidase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 588

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 107/355 (30%), Positives = 170/355 (47%), Gaps = 20/355 (5%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
               T +AIA +Q +                G+     + +   L   GDLD +      
Sbjct: 218 NFEATMQAIAKFQALEPNPLKASYLPAVYRKGDRIPHGKAVARVLYDLGDLDQAN----- 272

Query: 134 FDAYVES-----------AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           +D  + +           A+K FQ R+GL   G++  ST + + +P     R+L +N+ R
Sbjct: 273 YDKLMAAKSISNTGVMNDAIKHFQKRYGLSADGIIGKSTAQQLAIPYGELARRLALNMQR 332

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
              +        ++LVNIP   L+  ENGKV   S VIVGR  R T +  S IN ++ NP
Sbjct: 333 ANVIAPFAKDKAHILVNIPDYMLKVYENGKVVFDSKVIVGRESRPTNLFSSSINTMVVNP 392

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFI--F 298
           YW +P +I QKD++   +++P YL  +NI +I+      E+ V  ++W++  P +F   F
Sbjct: 393 YWNVPITIKQKDVIPKAKRNPGYLAAHNIKVINSWRDRTEIPVSSINWSAVNPKSFPHEF 452

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           +Q PG  N++   K    +    ++HDTP   LF+   R  +SGCVRV    DL  ++L 
Sbjct: 453 QQGPGPHNSLGMVKFLMPNDYAIFLHDTPARGLFSKTKRDLSSGCVRVARAHDLADFVLD 512

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                S    + + K +    V L+  + V FVY++ W  +D  +Q R+DIY  D
Sbjct: 513 YQNRPSMRTFDSMRKDKGQDTVSLSRRIGVDFVYLTGWVNQDGQVQMREDIYNYD 567


>gi|260776045|ref|ZP_05884940.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607268|gb|EEX33533.1| hypothetical protein VIC_001429 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 517

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 150/296 (50%), Gaps = 9/296 (3%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           DL   +     +D  +E+AVK FQ  HGL   G++   T+  +N+    R+  L +N  R
Sbjct: 221 DLSDVRRDVNWYDVTLETAVKQFQRLHGLTDDGIIGPDTIRWLNISPSERLSILALNAER 280

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +    ++     ++VN+P   ++   +G+    S V+VGR  R TP++ ++++ ++ NP
Sbjct: 281 GRLWPIER--DTIIVVNVPGFEMKYWYSGQEVFESKVVVGRKGRPTPMMTTKLDSLILNP 338

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPPNFIFR- 299
            W +P  I+ +D++  +++DP+YL   NI ++ + G +  +  E++DW +  P  F +R 
Sbjct: 339 TWNVPWKIMVEDIIPKVKEDPEYLVRQNITIVPKWGSKELINPEDIDWQNMRPSAFPYRM 398

Query: 300 -QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q  G  NA+   K    +R   Y+HDTP   LF+   R  +SGC+RV +       LL+
Sbjct: 399 TQLSGNNNALGLYKFNTPNRRAIYLHDTPSKNLFDEASRAFSSGCIRVEHADQFATRLLE 458

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                     EE +       + L   VPVH +Y +AW  +   I +RDDIY  D 
Sbjct: 459 SQGLDMSTLDEEELAA--NKSIPLKQRVPVHIIYQTAW-SEGGKIHYRDDIYRWDR 511


>gi|254710055|ref|ZP_05171866.1| hypothetical protein BpinB_07218 [Brucella pinnipedialis B2/94]
 gi|256031550|ref|ZP_05445164.1| hypothetical protein BpinM2_12995 [Brucella pinnipedialis
           M292/94/1]
 gi|261317602|ref|ZP_05956799.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|265988636|ref|ZP_06101193.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|261296825|gb|EEY00322.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|264660833|gb|EEZ31094.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 556

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 140 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 197

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 198 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 255

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 256 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 315

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 316 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 374

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 375 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 433

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 434 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 493

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 494 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 539


>gi|307318578|ref|ZP_07598012.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306895918|gb|EFN26670.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 631

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 156/382 (40%), Gaps = 21/382 (5%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRL 114
            + V   ++S  P  ++       + +   +  +      E+ P   L  G S+  +  +
Sbjct: 253 SSDVAALVESQNPKSAQ--FTALRQELERLRTQVEAAPRVEIAPGTLLKPGESNPELANV 310

Query: 115 RE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +L  S  L     +       +  +   +   V+ FQ  +GL   G+V  +++ A+
Sbjct: 311 IAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADGIVGQASIRAL 370

Query: 166 NV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                   +I ++++ + + + L +  +G RYV +N PA +    E G       V+VG 
Sbjct: 371 TGGDTTQGKIDKVEIAMEQARWLPDG-LGDRYVFINQPAFTASYTEQGTEQFSMRVVVGS 429

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
              QT      I  +  NPYW +P+SII  +M+  LR DP YL      +    G+ V  
Sbjct: 430 KANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVEVG-GRVVPS 488

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             V+W          RQ P   NA+   KI F + +  YMHDTP    F    R  + GC
Sbjct: 489 TAVNWYGSTNS-IAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALSHGC 547

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VR+ +   +   +L      S   +   +   +   + ++ +VPV+  Y +AW  KD  +
Sbjct: 548 VRLADPRRMAAAVL----GVSVDEVGMEISGGRNKALPVSAKVPVYVAYFTAWPNKDGTV 603

Query: 404 QFRDDIYGLDNVHVGIIPLPED 425
           ++ DD+Y  D            
Sbjct: 604 EYFDDVYERDMYMNRAFEATRK 625


>gi|154246011|ref|YP_001416969.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160096|gb|ABS67312.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 672

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 163/415 (39%), Gaps = 36/415 (8%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYH-SIVNDRFD--NFLARVDMGIDSDIPIISKETI 75
           +L               +  ++                 +    +  + +  P  +    
Sbjct: 263 VLTYARHAQAGRFDPGRISALVTPVREIPDPTAVLAKVAYAPDANAALAAYNPTHA--GY 320

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
              +  +A         G   +P    +  G S   +  LR RL ++G          A+
Sbjct: 321 RALKAQLARVTG--QTPGVVAVPPGAQIRPGASDPRIPTLRTRLGVTG----RPADDNAY 374

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ----VNLMRIKKLLEQK 190
           D  +  AVK FQ    + P+G+V  ST+ A+N         L+     N+ R + L  + 
Sbjct: 375 DPALVDAVKAFQEASKIKPTGIVGPSTIAALNAGATPGGGSLKSDVIANMERWRWLP-RD 433

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G  YV+VNIP   +   ++G     + V+VG+ +  TP+L   +  I+ NP W IP SI
Sbjct: 434 LGESYVMVNIPEFLVRIYQSGHEIHETRVVVGKPETPTPLLSREMQYIVVNPAWNIPPSI 493

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            + +MM LLR DP  L    I ++                     + FRQ P + NA+  
Sbjct: 494 ARNEMMPLLRSDPSALSRRGIEVVRNG---------------SGGYSFRQVPSERNALGR 538

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTPTWSRYH 367
            K  F + ++ Y+HDTP   LF N  R  + GCVRV   +     +         W++  
Sbjct: 539 IKFMFPNDHSVYLHDTPSKALFQNDRRAYSHGCVRVYEPLKFGEVIFNLGLPNDHWTQTR 598

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           I ++  +     V L    PVH VY +        +  R+D+YG++     ++ L
Sbjct: 599 IGKMFGS-SERYVNLKQRFPVHIVYFNVVVDDAGRLAVREDLYGINAETKTLLGL 652


>gi|15965611|ref|NP_385964.1| hypothetical protein SMc00150 [Sinorhizobium meliloti 1021]
 gi|307302730|ref|ZP_07582486.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15074792|emb|CAC46437.1| Putative membrane protein [Sinorhizobium meliloti 1021]
 gi|306903094|gb|EFN33685.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 631

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 156/382 (40%), Gaps = 21/382 (5%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRL 114
            + V   ++S  P  ++       + +   +  +      E+ P   L  G S+  +  +
Sbjct: 253 SSDVAALVESQNPKSAQ--FTALRQELERLRTQVEAAPRVEIAPGTLLKPGESNPELANV 310

Query: 115 RE--RLIISGDLDPSKGL-------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +L  S  L     +       +  +   +   V+ FQ  +GL   G+V  +++ A+
Sbjct: 311 IAGIKLKASEALKTEHAVVLAAYEGTPDYTPELVPLVEAFQKEYGLKADGIVGQASIRAL 370

Query: 166 NV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                   +I ++++ + + + L +  +G RYV +N PA +    E G       V+VG 
Sbjct: 371 TGGDTTQGKIDKVEIAMEQARWLPDG-LGDRYVFINQPAFTASYTEQGTEQFSMRVVVGS 429

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
              QT      I  +  NPYW +P+SII  +M+  LR DP YL      +    G+ V  
Sbjct: 430 KANQTYFFQDEIQTVEVNPYWGVPQSIIVNEMLPKLRNDPGYLDRMGYQVEVG-GRVVPS 488

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
             V+W          RQ P   NA+   KI F + +  YMHDTP    F    R  + GC
Sbjct: 489 TAVNWYGSTNS-IAVRQPPSSDNALGELKILFPNAHAIYMHDTPSKSFFKRDQRALSHGC 547

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VR+ +   +   +L      S   +   +   +   + ++ +VPV+  Y +AW  KD  +
Sbjct: 548 VRLADPRRMAAAVL----GVSVDEVGMEISGGRNKALPVSAKVPVYVSYFTAWPNKDGTV 603

Query: 404 QFRDDIYGLDNVHVGIIPLPED 425
           ++ DD+Y  D            
Sbjct: 604 EYFDDVYERDMYMNRAFEATRK 625


>gi|261314301|ref|ZP_05953498.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261321811|ref|ZP_05961008.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261758157|ref|ZP_06001866.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|261294501|gb|EEX97997.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261303327|gb|EEY06824.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738141|gb|EEY26137.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
          Length = 634

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 218 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 275

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 276 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 333

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 334 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 393

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 394 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 452

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 453 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 511

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 512 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 571

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 572 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|261222137|ref|ZP_05936418.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260920721|gb|EEX87374.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
          Length = 634

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 170/411 (41%), Gaps = 27/411 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 218 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 275

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 276 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 333

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q      P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 334 AHADASVYDPELVSAIKDYQKLSSGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 393

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 394 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 452

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 453 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 511

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 512 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 571

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              +       +    +K+   VPV+  Y +AW   D  I +  DIY  D+
Sbjct: 572 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDIYDRDS 617


>gi|254418463|ref|ZP_05032187.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
 gi|196184640|gb|EDX79616.1| Putative peptidoglycan binding domain protein [Brevundimonas sp.
           BAL3]
          Length = 497

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 89/413 (21%), Positives = 165/413 (39%), Gaps = 37/413 (8%)

Query: 20  LPMGLSLVEKPIHASVLD----EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET- 74
           L   +  + + +    +D    E + E   + V+       A  D  +   +  ++ +  
Sbjct: 89  LTQAVLTLAEALAHGRVDPASVETLWEMGRNQVDTPPLLATAVDDGTLAETMAGLAPQDR 148

Query: 75  -IAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSK---- 128
                      Y+ I  RGGWP       +    S   +  L  RL + GDL  +     
Sbjct: 149 GYQGLCDGFLRYRAIADRGGWPPFALGATIEPFASDPRLPALLPRLRVEGDLTDAAAAMV 208

Query: 129 -GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 + + ++ AV++FQ+RHGL+    +  +T  A+++  + R RQ+ +NL R + L 
Sbjct: 209 GPSGGDYGSVLQEAVRVFQVRHGLEADARIGPATQRALSISAEARARQIALNLERRRWL- 267

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           ++ +    + VN  A+ +   ++G+      V+ G  D  TP L      ++ NP W +P
Sbjct: 268 KRDVAPERIEVNTAASIMVYWKDGRPVHSMRVVTGDADNATPSLERPFASVVANPPWTVP 327

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI Q++++        Y++ NN+ + +                     +  Q  G   A
Sbjct: 328 TSIAQREILPRGA---GYMRANNMTIQNG--------------------MVVQRAGPNAA 364

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K E       ++HDTP    F+   R  + GCVRV++ +     LL   P      
Sbjct: 365 LGQVKFELQDSYAIFLHDTPSRGAFDQSFRHLSHGCVRVQDAVGFARLLLAPDP-ERLAR 423

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +  + + +T  V     + V  +Y +A+      + FRDDIY  D      +
Sbjct: 424 FDAALDSGQTVRVATGRPIDVRLLYWTAFLDGQGRVAFRDDIYRRDTRLAEAL 476


>gi|222148534|ref|YP_002549491.1| hypothetical protein Avi_2078 [Agrobacterium vitis S4]
 gi|221735520|gb|ACM36483.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 614

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 171/417 (41%), Gaps = 26/417 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVD--MGIDSDIPIISKETI 75
           IL      V   +  + +    +    +  ++   D   +  D    +    P   +   
Sbjct: 196 ILTYVQDTVRGRLDPNRISGYHDFKRKTVNLDPVLDLVRSSPDIAAYLHGRDPASPQ--F 253

Query: 76  AQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISG---------D 123
              +  +A      ++     +       L  G S+  +  + E +   G          
Sbjct: 254 QALKAELAKLVAEANQQQSKPVKINLTGVLKPGGSNPELANIVEGIKTYGSDALKTEHAL 313

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMR 182
                  +  +   + + V+ +Q   GL P G++  +T+  M       +I +L V + +
Sbjct: 314 TLTDYTGTPDYTPELVALVESYQKERGLKPDGVIGQATVRTMVGHSNAEKIEKLVVAMEQ 373

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           ++ L    +G RYV +N PA       + +  +   V+VG    QT    + I  + FNP
Sbjct: 374 LRWLPA-DLGPRYVFINQPAFEAYYFNDRQQQIAMKVVVGAPQHQTFFFQNMIQTVEFNP 432

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
           YW +PRSII  +M+  LRQDP YL      +   KG++V   +VDW +    +   RQ P
Sbjct: 433 YWGVPRSIIVNEMLPKLRQDPSYLDRLGYEV-SYKGRKVASSQVDWYTTS--DVDVRQPP 489

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              NA+   KI F + +  YMHDTP    F   +R  + GCVR+     +   ++  T  
Sbjct: 490 SSDNALGDLKILFPNAHAIYMHDTPAKSFFKRDMRALSHGCVRLAEPRVMAAAVMGTTV- 548

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
                I+  + + +   V++  + PV+  Y +AW  KD ++++ DD+YG D      
Sbjct: 549 ---EDIDAQIASGQNRAVQVPQKFPVYVAYFTAWPDKDGVVRYYDDVYGRDEATRKA 602


>gi|319783599|ref|YP_004143075.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169487|gb|ADV13025.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 629

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 20/379 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL--- 114
           +V   ++S  P             +   Q         + P   L  G +S  + +L   
Sbjct: 254 QVRTYLESRHPQ--NAEYQALRVELEALQASAENEIVVD-PKLLLKPGETSPELPKLLTL 310

Query: 115 -RERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NV 167
               L        G++      S  +D  +   +K  Q + G+   G++   T+ ++   
Sbjct: 311 IARNLDDEMGGAYGEVLSRLATSDVYDPELVPVIKAVQQKAGMKGDGVIGPRTVASLAGT 370

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               ++ +++V L  ++ L    +G   V +N PA +   ++NG+  LR+ V+VGR   Q
Sbjct: 371 SKADKLLKVEVALEELRWLPS-DLGSPRVFINQPAFTASYIDNGEEKLRTRVVVGRTTNQ 429

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T   + +I ++ F+PYW +P+SII  +M+  LR DP YL      + D +GK +    V+
Sbjct: 430 TSFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRNDPGYLDRAGYEVTDSRGKRIPSSAVN 489

Query: 288 WNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           W +      +  RQ P + NA+   KI F +++  YMHDTP+   F   +R  + GCVR+
Sbjct: 490 WGAYGSNIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKSFFQRDMRALSHGCVRL 549

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           ++   +   +L      S  +I E +K    T   +   +PV+  Y +AW      +++ 
Sbjct: 550 QDPRGMAAAVL----GTSVDYIAEKLKHGHATE-NVTRTIPVYVAYFTAWPDLSGKVEYF 604

Query: 407 DDIYGLDNVHVGIIPLPED 425
            D+Y  D+     + + E 
Sbjct: 605 GDVYDRDSRLKQALDVTEA 623


>gi|209884231|ref|YP_002288088.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
 gi|209872427|gb|ACI92223.1| peptidoglycan-binding domain 1 [Oligotropha carboxidovorans OM5]
          Length = 712

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 101/423 (23%), Positives = 168/423 (39%), Gaps = 45/423 (10%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYH-SIVNDRFDNFLA--RVDMGIDSDIPIISKETIA 76
           L          +H S +   I    H     +   N          +++  P    +   
Sbjct: 246 LDYARHAQSGRMHWSQVSGDIQYPDHTPDPTEILINISTARNAGAALETYNPPH--KAFQ 303

Query: 77  QTEKAIAFYQD-------ILSRGGWPELPIRPLHLG---NSSVSVQRLRERLIISGDLDP 126
           Q    +   +        I        +     +          V  LR +L I+     
Sbjct: 304 QLRAKLTELRGDTDESHKIADGETLRFVKATKKNPNPTVMEDARVPALRAKLGIT----- 358

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKK 185
                  +DA V +AV+ FQ  +GL  +G++D  TL A+N P + R I  ++VN+ R + 
Sbjct: 359 ENASDTHYDATVATAVRKFQAANGLKATGVLDKQTLAALNGPKNDRKIDIVRVNMERWRW 418

Query: 186 LLEQK----MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMF 240
           L        +G  YV++NIP  SL+ + NG    ++ V+VG+     TP L   +  I  
Sbjct: 419 LPRDLGAKALGDAYVVLNIPDYSLKLMHNGAPVWKTRVVVGKPGKHATPELTETMKYITV 478

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SII  + +  L+QDP  L+   + +       +                  Q
Sbjct: 479 NPTWNVPPSIIYNEYLPALQQDPTVLERMGLKLQRNPDGTI---------------RISQ 523

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK-- 358
            PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL   
Sbjct: 524 PPGERNALGRIRFNFPNKFLVYQHDTPDKHLFAKTERAFSHGCMRVQNPDQYAANLLSIA 583

Query: 359 -DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
                ++   I   +  R    +   T +PV+ VY +A+     +++FR DIYG D   +
Sbjct: 584 LPKDHYTPEKIRG-MYGRSEININFPTPIPVNIVYHTAFVDDAGVLEFRKDIYGRDARMI 642

Query: 418 GII 420
            ++
Sbjct: 643 SLL 645


>gi|39937248|ref|NP_949524.1| hypothetical protein RPA4188 [Rhodopseudomonas palustris CGA009]
 gi|39651106|emb|CAE29629.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 724

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 95/432 (21%), Positives = 171/432 (39%), Gaps = 41/432 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQ 77
           ++          +H S +   I    H I   +    +        +        +   +
Sbjct: 251 MMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLAKVTTAADASAALDSYNPPHKLYRE 310

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLH----------LGNSSVSVQRLRERLIISGDLDPS 127
            +K +A  +    +          L           +      V +LR RL ++      
Sbjct: 311 LKKKLAELRGEGDKPVIKIADGETLRYQPARKKRAEVKMDDPRVPQLRARLGVT-----E 365

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKL 186
              S  +DA V +AV+ FQ    L  SG++D  T++A+N P   R I  + VN+ R + L
Sbjct: 366 NPDSTTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKRDRTIDTIIVNMERWRWL 425

Query: 187 LEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFN 241
                   +G  YV++NIP  +L+ +++G     + V+ G+     TP+L   +  I  N
Sbjct: 426 PRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPGKHATPLLTETMKYITVN 485

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SII  + +  L+QDP  L    + +   +                 +    Q 
Sbjct: 486 PTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRD---------------GSIHISQP 530

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--- 358
           PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL    
Sbjct: 531 PGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDVYASTLLNIAM 590

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               ++   +   +  R    +K  T +PV+  Y +A+      +Q R D+YG D   + 
Sbjct: 591 PEKDYTPAKV-RAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGKLQLRKDVYGRDAAMLA 649

Query: 419 IIPLPEDHPIDS 430
           ++   +   +++
Sbjct: 650 LLKNEKGKNLEA 661


>gi|258620190|ref|ZP_05715229.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587548|gb|EEW12258.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 522

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 183/429 (42%), Gaps = 27/429 (6%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASV------LDEIINESYHSIVNDRFDN 54
           M  Y + N+  Y + +     +   L    +   V         +               
Sbjct: 91  MRTYRQQNQ-WYEYDLLATDTLLQYLSYAELAPKVGIPWFFEVALAKPLEAPSEEGLLAL 149

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVS 110
            +A     +D  +   +    A  ++ +  YQ +L+     ++P          G+    
Sbjct: 150 HIAVGSKTLDQLVDEYTPRDPAY-QQLLNTYQFLLATES-HDIPLYEQTGLKRPGDPLTH 207

Query: 111 VQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              L  RL +              +D  +   +K FQ  HGL P G++   T++ +N  V
Sbjct: 208 RDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSV 267

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R+  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+VGRV R TP
Sbjct: 268 TERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVFGAKVVVGRVTRPTP 325

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVD 287
           +++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      + +  + +D
Sbjct: 326 VMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLID 385

Query: 288 WNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+S  P    +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R  +SGC+R
Sbjct: 386 WSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIR 445

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V N       LL+                  T  + L   +PV  +Y + W  +   +Q+
Sbjct: 446 VENAQKFAQTLLEQQGIVLNELPAY------TQAIALKKRIPVQIIYQTVWY-EGGALQY 498

Query: 406 RDDIYGLDN 414
           RDDIY  D+
Sbjct: 499 RDDIYRYDS 507


>gi|262171698|ref|ZP_06039376.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
 gi|261892774|gb|EEY38760.1| hypothetical protein VII_002521 [Vibrio mimicus MB-451]
          Length = 522

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 184/429 (42%), Gaps = 27/429 (6%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASV------LDEIINESYHSIVNDRFDN 54
           M  Y + N+  Y + +     +   L    +   V         +               
Sbjct: 91  MRTYRQQNQ-WYEYDLLATDTLLQYLSYAELAPKVGIPWFFEVALAKPLEAPSEEGLLAL 149

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVS 110
            +A     +D  +   +    A  ++ +  YQ +L+     ++P          G+    
Sbjct: 150 HMAVGSKTLDQLVDEYTPRDPAY-QQLLNTYQFLLATES-HDIPLYEQTGLKRPGDPLTH 207

Query: 111 VQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              L  RL +              +D  +   +K FQ  HGL P G++   T++ +N  V
Sbjct: 208 RDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSV 267

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R+  L +N  RI+    Q+     ++VN+P   ++  ++G+    + V+VGRV R TP
Sbjct: 268 TERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDSGREVFGAKVVVGRVTRPTP 325

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVD 287
           +++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      + +  + +D
Sbjct: 326 VMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLID 385

Query: 288 WNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+S  P    +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R  +SGC+R
Sbjct: 386 WSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIR 445

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V N       LL+                  T  + L   +PV  +Y + W  +   +Q+
Sbjct: 446 VENAQKFAQTLLEQQGIVLNELPAY------TQAIALKKRIPVQIIYQTVWY-EGGALQY 498

Query: 406 RDDIYGLDN 414
           RDDIY  D+
Sbjct: 499 RDDIYRYDS 507


>gi|262165524|ref|ZP_06033261.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
 gi|262025240|gb|EEY43908.1| hypothetical protein VMA_001971 [Vibrio mimicus VM223]
          Length = 522

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 100/426 (23%), Positives = 182/426 (42%), Gaps = 27/426 (6%)

Query: 4   YLKINKILYCFFVYLILPMGLSLVEKPIHASV------LDEIINESYHSIVNDRFDNFLA 57
           Y + N+  Y + +     +   L    +   V         +                +A
Sbjct: 94  YRQQNQ-WYEYDLLATDTLLQYLSYAELAPKVGIPWFFEAALAKPLEAPSEEGLLALHMA 152

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP----IRPLHLGNSSVSVQR 113
                +D  +   +    A  ++ +  YQ +L+     ++P          G+       
Sbjct: 153 VGSKTLDQLVDEYTPRDPAY-QQLLNTYQFLLATES-HDIPLYEQTGLKRPGDPLTHRDA 210

Query: 114 LRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L  RL +              +D  +   +K FQ  HGL P G++   T++ +N  V  R
Sbjct: 211 LLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQNMHGLKPDGVIGPETMKWLNKSVTER 270

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +  L +N  RI+    Q+     ++VN+P   ++  + G+    + V+VGRV R TP+++
Sbjct: 271 LALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVFGAKVVVGRVTRPTPVMN 328

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNS 290
           ++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I      + +  + +DW+S
Sbjct: 329 TKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIRSWSDPEVLDPQLIDWSS 388

Query: 291 PEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             P    +  RQ  G  NA+   K    +    Y+HDTP   LFNNV R  +SGC+RV N
Sbjct: 389 INPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHLFNNVSRAFSSGCIRVEN 448

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
                  LL+                  T  + L   +PV  +Y + W  +   +Q+RDD
Sbjct: 449 AQKFAQTLLEQQGIVLNELPAY------TQAIALKKRIPVQIIYQTVWY-EGGALQYRDD 501

Query: 409 IYGLDN 414
           IY  D+
Sbjct: 502 IYRYDS 507


>gi|258624450|ref|ZP_05719397.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583297|gb|EEW08099.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 522

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 95/383 (24%), Positives = 170/383 (44%), Gaps = 20/383 (5%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-- 98
                          +A     +D  +   +    A  ++ +  YQ +L+     ++P  
Sbjct: 136 KPLEAPSEEGLLALHIAVGSKTLDQLVDEYTPRDPAY-QQLLNTYQFLLATES-HDIPLY 193

Query: 99  --IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSG 155
                   G+       L  RL +              +D  +   +K FQ  HGL P G
Sbjct: 194 EQTGLKRPGDPLTHRDALLRRLSLVNLDVTDVRDDITFYDQTLVKPIKQFQSMHGLKPDG 253

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  + G+   
Sbjct: 254 VIGPETMKWLNKSVTERLALLALNAERIRLWSTQQ--GTVIVVNVPGFEMKYWDAGREVF 311

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            + V+VGRV R TP+++++++ ++ NP W +PR I+ +D++ ++++D +YL  + I +I 
Sbjct: 312 GAKVVVGRVTRPTPVMNTKLDSLIINPTWNVPRKIMVEDILPMVKRDSEYLARHQIEIIR 371

Query: 276 EKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                + +  + +DW+S  P    +  RQ  G  NA+   K    +    Y+HDTP   L
Sbjct: 372 SWSDPEVLDPQLIDWSSINPETFPYRMRQQAGVQNALGMYKFNTPNSRAIYLHDTPSKHL 431

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           FNNV R  +SGC+RV N       LL+                  T  + L   +PV  +
Sbjct: 432 FNNVSRAFSSGCIRVENAQKFAQTLLEQQGIVLNELPAY------TQAIALKKRIPVQII 485

Query: 392 YISAWSPKDSIIQFRDDIYGLDN 414
           Y + W  +   +Q+RDDIY  D+
Sbjct: 486 YQTVWY-EGGALQYRDDIYRYDS 507


>gi|192293029|ref|YP_001993634.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286778|gb|ACF03159.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 724

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 96/432 (22%), Positives = 172/432 (39%), Gaps = 41/432 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQ 77
           ++          +H S +   I    H I   +    +        +        +   +
Sbjct: 251 MMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLAKVTTAADASAALDSYNPPHKLYRE 310

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLH----------LGNSSVSVQRLRERLIISGDLDPS 127
            +K +A  +    +          L           +      V +LR RL ++      
Sbjct: 311 LKKKLAELRGEGDKPVIKIADGETLRYQPARKKRAEVKMDDPRVPQLRARLGVT-----E 365

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKL 186
              S  +DA V +AV+ FQ    L  SG++D  T++A+N P   R I  + VN+ R + L
Sbjct: 366 NPDSTTYDATVAAAVRKFQDHADLKASGVLDERTVKALNTPKRDRTIDTIIVNMERWRWL 425

Query: 187 LEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFN 241
                   +G  YV++NIP  +L+ +++G     + V+ G+     TP+L   +  I  N
Sbjct: 426 PRDLGAPSLGDAYVILNIPDYTLKVMQHGAEVWTTRVVTGKPGKHATPLLTETMKYITVN 485

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SII  + +  L+QDP  L    + +   +                 +    Q 
Sbjct: 486 PTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRD---------------GSIHISQP 530

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--- 358
           PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL    
Sbjct: 531 PGEANALGRIRFNFPNKFLVYQHDTPDKNLFAREERAFSHGCMRVQNPDVYASTLLNIAM 590

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               ++   +   +  R    +K  T +PV+  Y +A+      +Q R D+YG D   +G
Sbjct: 591 PEKDYTPAKV-RAMYGRSEVDLKFPTPIPVNITYQTAFVDDAGKLQLRKDVYGRDAAMLG 649

Query: 419 IIPLPEDHPIDS 430
           ++   +   +++
Sbjct: 650 LLKNDKGKNLEA 661


>gi|118589141|ref|ZP_01546548.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
 gi|118438470|gb|EAV45104.1| hypothetical protein SIAM614_13853 [Stappia aggregata IAM 12614]
          Length = 656

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 92/422 (21%), Positives = 180/422 (42%), Gaps = 21/422 (4%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L   L      +  + + E  ++     V+        +    +++++  +  ++    
Sbjct: 233 VLTYVLDSRRGRVDPNRISEY-HDLPRHAVDLVSALEGFKNASDVEAEVANVQPQSDHFR 291

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISG---------DLDP 126
           +  + +A  +          +     L  G SS  ++ +   +  +G         +   
Sbjct: 292 KLTEELARLKAEDEDADQIVIAPDTFLKAGKSSPEMKNIVAAINKNGSEELKTAHAETLT 351

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKK 185
           +   +  +   +   VK FQ    L P G++  +T+ AM       +I ++++ + R + 
Sbjct: 352 AYDGAELYSPELVELVKAFQKEAKLTPDGIIGKNTINAMVGETNAAKIAKVELAMERSRW 411

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L EQ +G R V +N  A +      G+  L   V+VG+   QT   + +I  + +NPYW 
Sbjct: 412 LPEQ-LGERKVFINQAAFTATYTAPGEDPLSMRVVVGKKSNQTNFFYDKIQIVEYNPYWG 470

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPG 303
           +P SII  +M+  L +DP YL      +    G+++    VDW +          RQ PG
Sbjct: 471 VPYSIIVNEMLPKLAKDPSYLDRAGYEVTTPGGRQISSSAVDWYAVASKQQSVNVRQYPG 530

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   KI F ++++ YMHDTP   LF   +R  + GC+R+++   +   +L      
Sbjct: 531 SSNALGEVKILFPNKHHIYMHDTPAKSLFKKDMRAYSHGCIRLQDPKAMAAAVL----GK 586

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           S+ ++   +   +    ++  ++PV+  Y +AW  +D  I F  D+Y  D   +  I   
Sbjct: 587 SKDYVSSRISGGQNEQERVTGDIPVYVSYFTAWPEQDGTIGFYTDVYDRDMHLLEAIEKT 646

Query: 424 ED 425
           E 
Sbjct: 647 EA 648


>gi|115526100|ref|YP_783011.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisA53]
 gi|115520047|gb|ABJ08031.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           BisA53]
          Length = 705

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 100/433 (23%), Positives = 171/433 (39%), Gaps = 45/433 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS--IVNDRFDNFLA-RVDMGIDSDIPIISKETI 75
           +L          +H S +   I    H         +   A      +    P    +  
Sbjct: 233 MLDYARQAQSGRMHWSQVSSDILYPEHPIDPAEVLANVTNAKDPSAALAGYNPPH--KLY 290

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLD 125
            + +  +A  +         I        +P R     +      V +LR +L I+    
Sbjct: 291 RELKAKLAELRGQGDGPVVTIAEGPALKYVPARKKQAAIEVDDPRVPQLRAKLGIT---- 346

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
                S  +DA V +AV+ FQ    +  +G++D  T++A+N P   R I  + VN+ R +
Sbjct: 347 -ENADSTKYDAKVAAAVRKFQDATDIPVTGVLDDRTVKALNSPKRDRQIDIVVVNMERWR 405

Query: 185 KLLEQ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIM 239
            L  Q     +G  YV++N+P  +L+ ++N      + V+ G+     TP+L   +  I 
Sbjct: 406 WLPRQLGASSLGNAYVILNVPDFTLKVMQNDAAVWTTRVVTGKPGKHATPMLTETMKYIT 465

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W +P SII  + +  L+QDP  L    + +   +                 +    
Sbjct: 466 VNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLKLERNRD---------------GSIHIS 510

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK- 358
           Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL  
Sbjct: 511 QPPGERNALGRIRFNFPNKFLVYQHDTPDKHLFARDERAFSHGCMRVQNPDQYAATLLNI 570

Query: 359 --DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
                 +S   I   +  R    +K  T +PV+  Y +A+      +Q R DIYG D   
Sbjct: 571 TMPNERYSPERIRG-MYGRSEIDLKFPTPIPVNITYQTAFVDDSGKLQIRKDIYGRDAAM 629

Query: 417 VGIIPLPEDHPID 429
           +G++       ++
Sbjct: 630 IGLLRNSRGKDLE 642


>gi|312883636|ref|ZP_07743361.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368859|gb|EFP96386.1| hypothetical protein VIBC2010_12494 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 517

 Score =  302 bits (773), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 87/315 (27%), Positives = 162/315 (51%), Gaps = 10/315 (3%)

Query: 105 GNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+   +   L  RL + G D+   +     +DA +E A+K FQ  HG++  G++   T++
Sbjct: 202 GDRLENRAILLRRLEMVGIDIHRVRKDVTWYDASLEDAIKQFQSLHGIEVDGVIGPVTIK 261

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +N+ V+ R+  L +N  RI+   +Q+   + ++VN+P+  L+    G+    S V+VGR
Sbjct: 262 WLNLSVNKRLSILAINAERIRYWPDQR--EQLIVVNVPSFHLKYWRLGETVFESKVVVGR 319

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--V 281
             R TP++ ++++ ++ NP W +P  I+ +D++  +++D  YL  +NI ++ + G    +
Sbjct: 320 RGRPTPVMTTKLHSLILNPTWNVPWRIMVEDIIPKVKKDKNYLVRHNIKIVPKWGASDFI 379

Query: 282 FVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
             E +DW+  +P    +   Q  G  NA+   K    +R   Y+HDTP   LF+   R  
Sbjct: 380 NPESIDWDRLKPSRFPYQMTQMSGDKNALGLFKFNTPNRRAIYLHDTPVKSLFDETQRAF 439

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGC+R+ +       LL+           E +       + L + +PVH +Y +AW  +
Sbjct: 440 SSGCIRIEHADLFADLLLESEGLVIEEEDNEPL--GSNQSIPLKSRIPVHIIYQTAWY-E 496

Query: 400 DSIIQFRDDIYGLDN 414
              + +R+DIY +D 
Sbjct: 497 GGNVHYREDIYRMDR 511


>gi|218530929|ref|YP_002421745.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523232|gb|ACK83817.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 648

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 168/415 (40%), Gaps = 45/415 (10%)

Query: 22  MGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQ 77
                    ++ S +  +I         +       A        + S  P   +     
Sbjct: 198 YARDARSGRVNPSAISRLITPTLDLPPADTVLTRLAASGAGAGDVLQSYNPR--QPGYLA 255

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERL----IISGDLDPSKGLS 131
            +K +A  +   ++G    +LP  P L LG S   V  LR R       +G LD + G +
Sbjct: 256 LKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEA 315

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR----IRQLQVNLMRIKKLL 187
            A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R + L 
Sbjct: 316 DAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMERWRWLP 375

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP W +P
Sbjct: 376 PE-LGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVP 434

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI+++ + +         +     ++   G                    RQ PG+ NA
Sbjct: 435 PSILKQMLASG--------RTAGFEVVRRGGNI----------------SLRQPPGERNA 470

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+W++  
Sbjct: 471 LGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQER 527

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++++       ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 528 LKKLIGKG-ERTLRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 581


>gi|302382528|ref|YP_003818351.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193156|gb|ADL00728.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 521

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 31/363 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKG---- 129
            +        Y+ I+  GGWP       +  G+S   V  +  RL+  GD+  + G    
Sbjct: 173 YSNLSAGYVRYRRIIRNGGWPRFRAGASIEPGSSDTRVPIIITRLVAEGDMSEADGARLT 232

Query: 130 -LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              + +   +E+AV+ FQ RHGL P G + + T  ++    + R RQ+ +NL R + L  
Sbjct: 233 AQGLVYGPELETAVRSFQARHGLAPDGRIGAGTQSSLGASAEDRARQIALNLERRRWLKR 292

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           +    R + VN  AA +   ++G+    + V+ G    QTP L      ++ NP W +P 
Sbjct: 293 ELSPER-IEVNTAAAIMVYWKDGRPVHSNRVVCGAPATQTPSLEKPFASVVANPPWYVPA 351

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I +++++    + P YL   N+++ +                        Q  G   A+
Sbjct: 352 GIARREILP---RGPAYLASQNMYVQNGT--------------------VIQRAGPTAAL 388

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              K E       ++HDTP    FN   R  + GCVRV+N ++    LL   PT      
Sbjct: 389 GYVKFELRDSYAIFLHDTPSKAAFNLSTRQRSHGCVRVQNAVEFARILLSPDPTL-LSQF 447

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
           +   +TR+T  ++   E+ V  +Y +A+      + FR+DIY  D V    + +    P 
Sbjct: 448 DTAQQTRETKRIQTGREISVRLLYWTAFVDGQGRVAFREDIYRRDQVLAEALGIAVSLPT 507

Query: 429 DSD 431
             D
Sbjct: 508 VVD 510


>gi|300024143|ref|YP_003756754.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525964|gb|ADJ24433.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 654

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 163/377 (43%), Gaps = 17/377 (4%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQ 112
                    + S  P   +       + +   +     G    +P    +  G  S  + 
Sbjct: 220 ATATDKGAYLKSLQPKHKQ--FELLRQKLLALRS-GGNGETINIPGGANIAPGKRSPQIA 276

Query: 113 RLRERLIISGDLDPSKGLSV------AFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
            +R+ L ++    P  G          +D  +  AVK +++  G+  P+  + ++   ++
Sbjct: 277 LIRKALKVT---PPQAGPDGKPFDETFYDDDLARAVKAYKVEKGIDPPTPTITTALRRSL 333

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           N    +   +L  N+   + +    +G  YV VNIP   +  V++G+V     ++ G V+
Sbjct: 334 NGDDGISEAKLLANMEEWRWMP-DDLGDFYVTVNIPDFKVRVVKDGEVVFDERIVTGSVN 392

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
           RQTP+    +  I+F P W +P SI  K+++  LR     L+   + +++  G+ +    
Sbjct: 393 RQTPVFSDMMRTIVFQPRWNVPDSIKVKELLPGLRAGGDPLRRQGL-VMERNGRRISATS 451

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           ++W   +  NF   Q P   NA+   K  F + +  Y+HDTP   LFN  +R  + GC+R
Sbjct: 452 INWYRSDIRNFHVYQPPSGGNALGVVKFLFPNAHAVYLHDTPSKGLFNESIRAFSHGCMR 511

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQ 404
           VRN + L   +L     W +  + +++K   +   + L   +PVH  Y +A +  D  I+
Sbjct: 512 VRNPVQLAEVVLAQDKGWDKIAVNDLLKNGPEENEIALDRPIPVHITYFTARAGDDGAIE 571

Query: 405 FRDDIYGLDNVHVGIIP 421
              DIYG +      + 
Sbjct: 572 SFGDIYGHEKRITLALA 588


>gi|260459428|ref|ZP_05807683.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034982|gb|EEW36238.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 628

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 88/420 (20%), Positives = 172/420 (40%), Gaps = 21/420 (5%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IA 76
           +L          I  + +    +     + +             + + +     +     
Sbjct: 211 VLRYAHDAQSGRIEPNRMTGYYDFPAKPL-DLVGVLKTLAHTQEVRTYLESRHPQNPEYQ 269

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL----RERL-----IISGDLDPS 127
                +   Q         + P   L  G++S  + +L       L        G++   
Sbjct: 270 ALRVELESLQASAENEIVVD-PKLLLKPGDTSPELPKLLTLIARNLDDEMGGAYGEMLSR 328

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKL 186
              S  +   +   +K  Q + G+   G++   T+  +       R+ ++QV L  ++ L
Sbjct: 329 LATSEVYVPELIPLIKAVQQKEGMKGDGVIGPRTVALLAGTSKADRLLKVQVALEELRWL 388

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +G   V +N PA +   +++G+  L++  ++GR   QT   + +I ++ F+PYW +
Sbjct: 389 PS-DLGSPRVFINQPAFTASYIDDGQEKLKTRAVIGRTTNQTAFFYDQIKQVDFHPYWGV 447

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-NFIFRQDPGKI 305
           P+SII  +M+  LR DP YL      + D +GK +    V+W        +  RQ P + 
Sbjct: 448 PQSIIVNEMLPRLRNDPGYLDRAGYEVTDSRGKRIPSSAVNWGGYGANIPYSVRQQPSEA 507

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA+   KI F +++  YMHDTP+   F   +R  + GCVR+++   +   +L      S 
Sbjct: 508 NALGELKILFPNKHAIYMHDTPQKSFFKQDMRALSHGCVRLQDPRGMAAAVLDT----SV 563

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPED 425
            +I E +K   +T   +  ++PV+  Y +AW      +++  D+Y  D+     +   E 
Sbjct: 564 DYIAEKLKHGHSTQ-DVTRKIPVYVAYFTAWPDMSGKVEYFGDVYDRDSRLKQAMDATEA 622


>gi|316935702|ref|YP_004110684.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603416|gb|ADU45951.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 743

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 100/432 (23%), Positives = 175/432 (40%), Gaps = 41/432 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISK-ETIAQ 77
           ++          +H S +   I    H I   +    +        +        +   +
Sbjct: 270 MMDYARQAQSGRMHWSQVSADIQYPEHPIDPAQVLATVTTAADASAALDSYNPPHKLYRE 329

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLH---LGNS-------SVSVQRLRERLIISGDLDPS 127
            +K +A  +    +          L     G            V +LR RL ++      
Sbjct: 330 LKKKLAELRGESDKPAIKIAEGETLRYQPAGKKRAEVKIDDPRVPQLRARLGVT-----E 384

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKL 186
              S  +DA V +AV+ FQ    L  +G++D  T++A+N P   R I  + VN+ R + L
Sbjct: 385 NTDSATYDAAVAAAVRKFQHSADLKATGVLDDRTVKALNTPKRDRTIDTILVNMERWRWL 444

Query: 187 LEQK----MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFN 241
             Q     +   YV++N+P  +L+ ++NG+    + V+VG+     TP+L   +  I  N
Sbjct: 445 PRQLGAPALDDAYVILNVPDYTLKLMQNGEQVWSTRVVVGKPGKHATPLLTETMKYITVN 504

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SII  + +  L+QDP  L    + +   +                 +    Q 
Sbjct: 505 PTWNVPPSIINNEYLPALQQDPTVLDRMGLKLSRNRD---------------GSIHISQP 549

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--- 358
           PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL    
Sbjct: 550 PGEANALGRIRFNFPNKFLVYQHDTPDKNLFGRDERAFSHGCMRVQNPDQYAAALLNIAM 609

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
               ++   I   +  R    +K AT +PV+  Y +A+   D  +Q R DIYG D   + 
Sbjct: 610 PDKNYTPARIRS-MYGRSEVDLKFATPIPVNITYQTAFVDDDGKLQLRKDIYGRDAAMLA 668

Query: 419 IIPLPEDHPIDS 430
           ++   +   +++
Sbjct: 669 LLKNGKGKNLEA 680


>gi|299132062|ref|ZP_07025257.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298592199|gb|EFI52399.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 710

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 98/435 (22%), Positives = 173/435 (39%), Gaps = 47/435 (10%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYH--SIVNDRFDNFLAR-VDMGIDSDIPIISKETI 75
           +L          +H S +   I    H         +   AR     +++  P    +  
Sbjct: 244 VLDYARHAQSGRMHWSQVSGDIQYPEHYPDPTEVLINVSTARNAGAALETYNPPH--KLY 301

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLG-----------NSSVSVQRLRERLIISGDL 124
            + +  +A  +     G         L                   V  LR +L ++   
Sbjct: 302 KELKAKLAELRGKTDEGK-KIADGETLRFVKPTKKNPNPTVMDDARVPALRAKLGVT--- 357

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRI 183
                    +DA V +AV+ FQ  + L  +G++D+ T+ A+N P + R I  ++VN+ R 
Sbjct: 358 --ENASDTHYDATVAAAVRKFQSANDLKATGVLDNHTVAALNGPRNDRKIDIIRVNMERW 415

Query: 184 KKLLEQK----MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRI 238
           + L        +G  YV++NIP  SL+ + NG    ++ V+VG+     TP+L   +  I
Sbjct: 416 RWLPRDLGAPALGDAYVILNIPDYSLQLMHNGATAWKTRVVVGKPGKHATPLLTETMKYI 475

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W +P SII  + +  L+QDP  L+   + +       +                 
Sbjct: 476 TVNPTWNVPPSIIYNEYLPALQQDPTVLERMGLKLQRNPDGTI---------------RI 520

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q PG+ NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       +L 
Sbjct: 521 SQPPGEANALGRIRFNFPNKFLVYQHDTPDKYLFAKSERAFSHGCMRVQNPDQYAATILG 580

Query: 359 ---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                  ++   I   +       + L T +PV+  Y +A+      ++FR DIYG D  
Sbjct: 581 IALPKDHYTPEKIRS-MYGHNEININLPTPLPVNITYQTAFVDDAGKLEFRKDIYGRDAT 639

Query: 416 HVGIIPLPEDHPIDS 430
            + ++       +++
Sbjct: 640 MIKLLKEGGRRNLET 654


>gi|54309189|ref|YP_130209.1| amidase [Photobacterium profundum SS9]
 gi|46913621|emb|CAG20407.1| hypothetical amidase [Photobacterium profundum SS9]
          Length = 578

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 99/359 (27%), Positives = 172/359 (47%), Gaps = 19/359 (5%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-----KGLSVAFDA 136
           I   Q +             +  G++ V+ + L + L    D+  +       +    ++
Sbjct: 219 IERLQQLPPHSLTRSDLKGLIRKGDAIVAGKELAKVLFDLNDMTEAEYTFITQMPTITNS 278

Query: 137 -YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +  A+K FQ R+GL   G++ ++T   + +P     R++ VN+ R + +        +
Sbjct: 279 GTMLEAIKRFQRRNGLADDGIIGAATTAQLVMPYTDIARRVAVNIQRFRNINVID-NQPH 337

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP   L+  E G V   S VIVGR  R T +  S IN ++ NP W +P +I +KD+
Sbjct: 338 IWVNIPDYMLKIFEQGNVIFESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDV 397

Query: 256 MALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMAST 311
           +  ++    YL  +N+ +++      E+  +++DW+S  P  F   F+Q PG  N++   
Sbjct: 398 IPKVKHSRDYLTAHNMRILNSWRDRTEIPADQIDWSSVNPKTFPHEFQQGPGPSNSLGRV 457

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K    +  + Y+HDTP   LFN   R  +SGCVRV    DL  +++      +      +
Sbjct: 458 KFLMPNDYSIYLHDTPARGLFNKTKRNLSSGCVRVEKAYDLANFIIDFQKRKNIESFNAM 517

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPIDS 430
           +K      V+L+  + V FVY++AW  + + +Q R+DIYG D+        P+   IDS
Sbjct: 518 LKDGDLDTVRLSQRLGVDFVYLTAWIDEKNTLQMREDIYGYDS--------PQKEAIDS 568


>gi|27382242|ref|NP_773771.1| hypothetical protein blr7131 [Bradyrhizobium japonicum USDA 110]
 gi|27355413|dbj|BAC52396.1| blr7131 [Bradyrhizobium japonicum USDA 110]
          Length = 735

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 93/428 (21%), Positives = 169/428 (39%), Gaps = 41/428 (9%)

Query: 22  MGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
                    +H S +   I    H    ++         D     D     ++   + + 
Sbjct: 267 YARQAQSGRMHWSQVSADILYPEHPVDPSEVLAKVTTAADASAALDSYNPPQKLYKELKA 326

Query: 81  AIAFYQ--------DILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            +A  +        +I         P       +      V +LR +L I+         
Sbjct: 327 KLAELRGQGSGPVIEIADGPALKYTPAGKKQAEIVVEDPRVPQLRAKLGIT-----ENAS 381

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKLLEQ 189
              +DA V  AV+ FQ    +  +G++D  T++A+N P   + I  + VN+ R + L   
Sbjct: 382 DTRYDAAVAEAVRKFQNGAEIKATGILDDKTVKALNTPKRDKQIDTVLVNMERWRWLPRD 441

Query: 190 ----KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-RQTPILHSRINRIMFNPYW 244
                +G  YV++NIP  +L+ ++ G+    + V+ G+     TP+L   +  I  NP W
Sbjct: 442 LGVPSLGDAYVILNIPDYTLKVMQRGQPVWTTRVVTGKPGQHATPLLTETMKYITVNPTW 501

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            +P SI+  + +  L+QDP  L+   + +   +   V                  Q PG+
Sbjct: 502 NVPPSIVYNEYLPALQQDPTVLQRMGLKLEQNRDGSV---------------HISQPPGE 546

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK---DTP 361
            NA+   +  F ++   Y HDTP+  LF    R  + GC+RV+N       LL       
Sbjct: 547 ANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAFSHGCMRVQNPDQYASVLLNIAMPNE 606

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            ++   +   +  +    +K  T +PV+  Y +A+      +QFR D+YG D+  + I+ 
Sbjct: 607 KYTPERVRS-MYGKSEIDLKFPTPIPVNITYQTAFVDDAGKLQFRKDVYGRDSTMINILK 665

Query: 422 LPEDHPID 429
                 ++
Sbjct: 666 NSRGKDLE 673


>gi|254561917|ref|YP_003069012.1| hypothetical protein METDI3518 [Methylobacterium extorquens DM4]
 gi|254269195|emb|CAX25161.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 646

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 168/415 (40%), Gaps = 45/415 (10%)

Query: 22  MGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQ 77
                    ++ + +  +I         +       A        + S  P   +     
Sbjct: 196 YARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGSGAGDVLQSYNPR--QPGYLA 253

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERL----IISGDLDPSKGLS 131
            +K +A  +   ++G    +LP  P L LG S   V  LR R       +G LD + G +
Sbjct: 254 LKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEA 313

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR----IRQLQVNLMRIKKLL 187
            A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R + L 
Sbjct: 314 DAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMERWRWLP 373

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP W +P
Sbjct: 374 PE-LGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVP 432

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI+++ + +         +     ++   G                    RQ PG+ NA
Sbjct: 433 PSILKQMLASG--------RTAGFEVVRRGGNI----------------SLRQPPGERNA 468

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+W++  
Sbjct: 469 LGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQER 525

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++++       ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 526 LKKLIGKG-ERTLRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 579


>gi|13470744|ref|NP_102313.1| hypothetical protein mll0533 [Mesorhizobium loti MAFF303099]
 gi|14021487|dbj|BAB48099.1| mll0533 [Mesorhizobium loti MAFF303099]
          Length = 626

 Score =  300 bits (767), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 92/379 (24%), Positives = 168/379 (44%), Gaps = 20/379 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
            V   ++S  P             +   Q         + P   L  G +S  + +L   
Sbjct: 251 EVRTYLESRHPQ--NAEYQALRVELEALQASAENEIVVD-PKLLLKPGETSPELPKLLSL 307

Query: 118 LII---------SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NV 167
           +            G+L      S  +   +   +K  Q++ G+   G++   T+  +   
Sbjct: 308 IARNLDDNMGGTYGELLSRLASSEVYVPELVPLIKAVQVKEGMKGDGVIGPRTVALLAGT 367

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               R+ ++QV L  ++ L    +G   V +N PA +   ++NG+  L++ V+VGRV  Q
Sbjct: 368 SKADRLLKVQVALEELRWLPS-DLGSPRVFINQPAFTASYIDNGEEKLKTRVVVGRVTNQ 426

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T   + +I ++ F+PYW +P+SII  +M+  LR DP YL      + D +GK +    V+
Sbjct: 427 TAFFYDQIKQVDFHPYWGVPQSIIVNEMLPRLRSDPGYLDRAGYEVTDSRGKRIPSSAVN 486

Query: 288 WNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           W +      +  RQ P + NA+   KI F +++  YMHDTP+   F   +R  + GCVR+
Sbjct: 487 WGAYGANIPYSVRQQPSEANALGELKILFPNKHAIYMHDTPQKSFFKQDMRALSHGCVRL 546

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           ++   +   +L      S  ++ E +K   +T   +  ++PV+  Y +AW      +++ 
Sbjct: 547 QDPRGMAAAVL----GTSVDYVAEKLKHGHSTE-DVTRKIPVYVAYFTAWPDMSGKVEYF 601

Query: 407 DDIYGLDNVHVGIIPLPED 425
            D+Y  D+     +   E 
Sbjct: 602 SDVYDRDSRLKQALDATEA 620


>gi|304392206|ref|ZP_07374148.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303296435|gb|EFL90793.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 694

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 23/383 (6%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSSVS 110
              A     + S  P     +    ++ +A    ++  G    + I+    +  G ++  
Sbjct: 306 AEEAAPATVLASAHPA--DASYTALKRELATL--LIEAGDVKIITIKSGTFIRPGGTNDQ 361

Query: 111 VQRLRERL---------IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           V  + E +           + D          +       V+ FQ + GL P G+V  +T
Sbjct: 362 VASIVEAISLKMSAEERAEAFDALMMDYSDGVYIEEAVELVRAFQKKSGLKPDGIVGKNT 421

Query: 162 LEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           L  +       +I ++++ + R++      +G R+V +N PA     +  GK  +    +
Sbjct: 422 LARLKFDSPKTKIDKVRLAMERLRWHP-DSLGSRHVFINQPAYRATLMNGGKPQISMRAV 480

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+   QT   H  I  + FNPYW IPRSI+  +M+  LR++P +  +    +  + G+ 
Sbjct: 481 VGKPQHQTNFFHDEIEYVEFNPYWGIPRSILVNEMLPKLRRNPSHFDNLGYEVTTQGGRR 540

Query: 281 VFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
           +    VDW S      +  RQ PG  NA+   KI F +++  YMHDTP   LF    R  
Sbjct: 541 ISSSSVDWWSVGSNFPYNVRQPPGPKNALGELKIMFPNKHAIYMHDTPAKSLFKREKRAY 600

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           + GCVR+ +   +   +L          +   +  R+    +L T++PV   Y +AW   
Sbjct: 601 SHGCVRLADPRAMAAAVL----GTRVDDVSAEIFDRQNKTRRLKTKLPVFVSYFTAWPTA 656

Query: 400 DSIIQFRDDIYGLDNVHVGIIPL 422
           D  +++  D+Y  D   +  + +
Sbjct: 657 DGKVEYFGDVYQRDTALLKAMSM 679


>gi|157961829|ref|YP_001501863.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157846829|gb|ABV87328.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 434

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 100/399 (25%), Positives = 178/399 (44%), Gaps = 15/399 (3%)

Query: 21  PMGLSLVEKPIHASVLDEIINE-----SYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
            + + L        V+D              +  + F      + +  +  + +I ++ I
Sbjct: 38  SVAMQLSSLAFDLGVIDSAAESTNTVGLVKLLNKELFQVEFTSLSLSTEQYLKLIKRKDI 97

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSV 132
           A   + I  Y+ +  R  WP +    L LG     V +LR  L+  GD++P   +     
Sbjct: 98  ASYRRLIKQYKAL-DRFQWPMINPIELRLGLRVKEVAKLRWVLVKLGDMEPHTIAAYRES 156

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            +D  VE+ +K FQ+RHGL   G + + TL ++N     R+ QLQ  L     L +    
Sbjct: 157 IYDPSVEAGLKRFQIRHGLSVDGKLGNQTLLSINTKPSFRVVQLQKAL--KLSLKKFDEE 214

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             YV VN+   +L   +NG   L+  VIVG+   +TP L++ ++ +  NP W  P SII 
Sbjct: 215 QEYVFVNLTDYTLRISKNGVEQLKMPVIVGKPSSKTPELNTVVSVVTINPTWTPPASIIY 274

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP----EPPNFIFRQDPGKINAM 308
           +D+M  + + P YL++NN  +   K           ++     +       Q  G  NA+
Sbjct: 275 QDIMKSVDEHPNYLRNNNFVLKSYKTGIEDSNLAGMDTAILKHKLKTSTLVQRSGDKNAL 334

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +    + +  ++HDTP   LF    R  + GC+R+        +L+   P  +++  
Sbjct: 335 GKFRFTIPNTSAIFLHDTPNKYLFKRANRALSHGCIRLSEPERFAHYLISKEPLQTQHLF 394

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
           ++ +KT KT   +L + +P++ +Y + W  KD  +Q R+
Sbjct: 395 QKALKTNKTMHFRLRSRLPINIIYQNVWIDKDGRLQIRE 433


>gi|306843862|ref|ZP_07476457.1| cell wall degradation protein [Brucella sp. BO1]
 gi|306275617|gb|EFM57341.1| cell wall degradation protein [Brucella sp. BO1]
          Length = 681

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 96/406 (23%), Positives = 168/406 (41%), Gaps = 27/406 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 250 LRYAIDAGEGRIIADRLSGFHDLPRMRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 307

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 308 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 365

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 366 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 425

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L     G RYV+VN PA      E+G+  L   V++G    QT   ++++  ++FNP W 
Sbjct: 426 LP-HDFGKRYVMVNQPAYRAGYYEDGQQKLGMNVVIGSPTHQTYFFYNKVQTVVFNPSWG 484

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPG 303
           +PRSII  +M+  + +D  YL  N   +    GK+V    V+W++          RQ P 
Sbjct: 485 VPRSIILNEMLPKVMRDTSYLDRNGYEVY-ANGKKVSASAVNWSAVATGKAHIGIRQKPS 543

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N++   KI F + ++ YMHDTP    F   +R  + GC+R+    D+   +L  +   
Sbjct: 544 LDNSLGELKILFPNAHDIYMHDTPAKSYFKRDMRALSHGCIRLERPRDMAAAVLGTSVKN 603

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
              +       +    +K+   VPV+  Y +AW   D  I +  DI
Sbjct: 604 LDKYF-----GKDERGIKVPEPVPVYIAYFTAWPDADGKIHYYGDI 644


>gi|308049138|ref|YP_003912704.1| peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
 gi|307631328|gb|ADN75630.1| Peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
          Length = 492

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 99/398 (24%), Positives = 167/398 (41%), Gaps = 16/398 (4%)

Query: 33  ASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
              LD  +N     +    F      D    R+   + +  P +           +    
Sbjct: 93  PGQLD--LNAPLSLMPEPGFASAMAHDAAKGRLYERVLALEPPVP--HYLAFSNRLRKLH 148

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            +  +          +  G     V  +R +L   GD       S+ +D  + +AV+ FQ
Sbjct: 149 HLARQPPLAIGAWGVIKPGEHHAEVAPIRRQLARLGDYPGR-TDSLRYDGGMVAAVQQFQ 207

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            RHGL   G++   T   + +    R R L   L+R            ++LVNIP   L+
Sbjct: 208 RRHGLKADGVIGPRTRHWLRLDYQERARLLARALVRQA-HDRHYFAPDHLLVNIPDYRLD 266

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
            V++G+    + V+VG   R+TP +HS +  ++ NPYW +P SI++KD++  +  D  Y+
Sbjct: 267 WVQDGQSRFSARVVVGMPSRRTPRMHSELRSVVVNPYWNVPNSIMRKDLLPRILTDGSYV 326

Query: 267 KDNNIHMIDEKGKEV--FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           + N   ++D + + +    +E+   + +   +  RQ PG  N++   K    +    Y+H
Sbjct: 327 QRNRFEVLDSENRPLWLSPDELSRLAYQGFPYRLRQRPGPGNSLGRYKFHLINSQAIYLH 386

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLAT 384
           DTP+  LF    R  +SGC+RV N   L   LL+            +  +     + L  
Sbjct: 387 DTPKQRLFERSTRAFSSGCIRVENADLLADLLLQAQSPEGPPLKRYLNASG-PRWLTLQQ 445

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            + V+ VY SAW       QFR DIY L+   +G  P 
Sbjct: 446 PLAVYLVYWSAWMDG-GRAQFRSDIYELEKAAIGRQPA 482


>gi|110637822|ref|YP_678029.1| hypothetical protein CHU_1418 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280503|gb|ABG58689.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 558

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 86/353 (24%), Positives = 168/353 (47%), Gaps = 9/353 (2%)

Query: 75  IAQTEKAIAFYQDILSRGGW-PELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
                + +     + S+  +  +LP   R L LG++   +  ++ RL  + + +    L+
Sbjct: 206 YESLRRTLRLVDSLGSQAIYNQKLPYLDRTLTLGDTCYIISSVKRRLQSTSEYNFDS-LN 264

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             FD  ++ ++++FQ   GL  SG +D  T++ +N         + VN+ R + L    +
Sbjct: 265 NTFDEQLQESIRIFQTHVGLHASGKIDKKTIDKLNFTAAEVRGAILVNMERFRWLPN-DL 323

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              ++LVNI   +L    +  V    +VIVGR    TP+  + +  I FNPYW +PRSI 
Sbjct: 324 PKEFILVNIADYTLRHFIDKNVVYTESVIVGREYTSTPVFEAMMTYIEFNPYWTVPRSIA 383

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
            K+++  L+++P YL+ +N+ +     +          +     F  +++PG  N++   
Sbjct: 384 VKEILPSLKRNPNYLQSHNMDLFRGNAQVAIPSSFSNYTAGNFPFTIKENPGPKNSLGQV 443

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           K+ F +  + Y+HDTP   LF    R  + GC+R+++ +   + +L      ++  I+++
Sbjct: 444 KLMFPNPYSIYLHDTPGKYLFEQEERSFSHGCIRLKDPLKFALHILSKQ-GVTQADIDKI 502

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQ--FRDDIYGLDNVHVGIIPL 422
           ++ +K   + L  ++PV   Y + +  K   I   F  DIYG D   +  +  
Sbjct: 503 IRNKKNYVIPLKEKIPVMLTYFTCY-SKRGDIHLYFFKDIYGKDKKILEALQN 554


>gi|90410380|ref|ZP_01218396.1| hypothetical amidase [Photobacterium profundum 3TCK]
 gi|90328621|gb|EAS44905.1| hypothetical amidase [Photobacterium profundum 3TCK]
          Length = 578

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 90/326 (27%), Positives = 162/326 (49%), Gaps = 11/326 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPS-----KGLSVAFDA-YVESAVKLFQMRHGLD 152
              +  G+  V+ + L + L    D+  +       +    ++  +  A+K FQ RHGL 
Sbjct: 236 KGLIRKGDVIVAGKDLAKVLFDLNDMTEAEYAFITQMPTVTNSGTMLEAIKRFQRRHGLA 295

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G++ ++T   + +P     R++ +N+ R + +        ++ VNIP   L+  + G 
Sbjct: 296 DDGLIGAATTAQLVMPYTDIARRIALNMQRFRNINMID-NQPHIWVNIPDYMLKIFDQGN 354

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V   S VIVGR  R T +  S IN ++ NP W +P +I +KD++  ++    YL  +N+ 
Sbjct: 355 VIFESKVIVGRTSRPTNLFSSAINTMVVNPTWNVPETIKRKDVIPKVKHSRDYLTAHNMR 414

Query: 273 MIDEKG--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           +++      E+  +++DW++  P  F   F+Q PG  N++   K    +  + Y+HDTP 
Sbjct: 415 ILNSWRDRTEIPADQIDWSNVNPKTFPHEFQQGPGPSNSLGRVKFLMPNDYSIYLHDTPA 474

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LFN   R  +SGCVRV    DL  +++      +      ++       V+L+  + V
Sbjct: 475 RGLFNKSKRNLSSGCVRVEKAYDLANFIIDFQKRKNIEPFNAMLNDGDLDTVRLSQRLGV 534

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
            FVY++AW  + + +Q R+DIYG D+
Sbjct: 535 DFVYLTAWVDEKNTLQMREDIYGYDS 560


>gi|59711764|ref|YP_204540.1| carboxypeptidase [Vibrio fischeri ES114]
 gi|59479865|gb|AAW85652.1| predicted carboxypeptidase [Vibrio fischeri ES114]
          Length = 515

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 92/363 (25%), Positives = 177/363 (48%), Gaps = 17/363 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
            +     +  P  S +   +  + +  Y           +  R +   N    V  +  R
Sbjct: 146 DLVSFTHALRP--SSDQYEELYQRLFHYYQPYEDSESVFIKERLIRP-NQLTDVNAIIYR 202

Query: 118 LIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L +SG+++  +        +  +D+ +   +K FQ RHGL   G++   TL  +N+    
Sbjct: 203 LQVSGEINHQEADMLLRQSNDHYDSSLVLIIKEFQKRHGLKQDGIIGPKTLHWLNMTAKE 262

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R+R + +N+ R++    +     +VLVNIP+  +   + G++   S VIVG+ +R+TPI 
Sbjct: 263 RVRIMALNIQRLRLW--ENKNSNFVLVNIPSYEMAYWQEGELVFTSKVIVGKPERRTPIF 320

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWN 289
            +R+N I+FNP W +P  I+++D++     +  +L+  N  +I      + + ++++DW 
Sbjct: 321 TTRLNAIVFNPEWKVPTKIMREDILPKALNNKDFLQSQNFEIIPTWLSKEVISIDDIDWE 380

Query: 290 SPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                   +  +Q  G  NA+   K    +RN  Y+HDTP   LF+   R  +SGC+RV 
Sbjct: 381 QVNVETFPYKLKQKSGNTNALGRYKFNTPNRNAIYLHDTPSRSLFSKQHRAYSSGCIRVE 440

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +    L+K++  +S    ++  +  +T+ V L  ++ V+ +Y ++W  +D+ +QFR 
Sbjct: 441 KASEFAQLLMKES-HFSTQDYKDYHELPETSKVSLDQQISVYTIYQTSWVGEDNQVQFRM 499

Query: 408 DIY 410
            IY
Sbjct: 500 -IY 501


>gi|150026170|ref|YP_001296996.1| hypothetical protein FP2133 [Flavobacterium psychrophilum JIP02/86]
 gi|149772711|emb|CAL44194.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 566

 Score =  298 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 100/393 (25%), Positives = 180/393 (45%), Gaps = 53/393 (13%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGN------SSVSVQRLRERLIISGDLDPSK 128
               ++A+              +P   L   +      S+ +V+ ++ RL+   D+  + 
Sbjct: 182 YKNLKQALQVLNAFPKD----SVPFVILKPKDKIALNKSNKAVKIIKSRLMYWHDMKQAN 237

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            ++  +D   + AVK FQ RHGL P G++   T+ A+N   + RI Q+  NL R +    
Sbjct: 238 TITNIYDKETQDAVKTFQSRHGLTPDGLIGKGTILALNFTKNQRIEQVISNLERWRWFAS 297

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
              G  Y+L+NIP  SL A++N     +  ++VG+  RQTPIL S+++ I  NP W +P 
Sbjct: 298 -DFGQNYLLINIPDYSLLAIKNNDTMQKQRIVVGKDTRQTPILESKVSNINLNPNWTVPP 356

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I+++D+     +D    K   + ++D K KE+      W   +   + + Q+PGK +++
Sbjct: 357 TILKEDIYPDAIKDKGAFKKKGLVILDHKNKEINPWS--WTIEDAKKYKYVQNPGKNSSL 414

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI F ++ + Y+HDT     F    R  +SGCVR+   +++  +L+ +   W+   I
Sbjct: 415 GLMKINFPNKYSVYLHDTNHRDFFGLNYRSLSSGCVRLEKPLEMAEYLINNPEKWNLKTI 474

Query: 369 EEVVKTR---------------------------------------KTTPVKLATEVPVH 389
           ++                                            KT  V++A ++ +H
Sbjct: 475 QDTTDINHYNKLQKEKEKKIAIKNAKLLAKNPLLVIPEKTYPKQELKTIVVRIADDIFIH 534

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +Y +AW  K+  +QFR+DIY LD+     +  
Sbjct: 535 QLYWTAWLQKE-TLQFREDIYCLDSDLYNKLRN 566


>gi|228472762|ref|ZP_04057520.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228275813|gb|EEK14579.1| peptidoglycan-binding domain 1 protein [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 559

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 83/418 (19%), Positives = 172/418 (41%), Gaps = 18/418 (4%)

Query: 20  LPMGLSLVEKPIHASVLDEI-----INESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           +     L  + +    + ++     + +    ++++       + +  +   I  +  + 
Sbjct: 141 ITASFLLFTRHLTRGRVPKVGDEKRVWKRTRPLLDNVELLLKLKDNDNLSQIIEALQPQQ 200

Query: 75  IAQTEKAIAFYQDILSRGGWPELP-----IRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
               +     Y+++         P     ++   +G +  ++  LR  L   G   P + 
Sbjct: 201 PFY-KAMAQRYRELEKDTAEVLTPFAITDLKSYTIGYADSTILALRACLKHKGYESPVQE 259

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                D+ +  AVK FQ   G+   G+  + T+  + +    +   L +N+ R++    +
Sbjct: 260 NPEQVDSLLVEAVKDFQRSIGIPADGVPGAQTMGYLLMTAKEKRDLLLLNMERLRWH-NK 318

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  Y+LVNIP   L       +  ++ V+VG  +  TPI    +  + F P W +P+S
Sbjct: 319 DLGEDYILVNIPEYRLRLFHKDSLVFQTRVVVGNPETPTPIFSDSLRYVEFRPTWSVPQS 378

Query: 250 IIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGKI 305
           I++K+M+  +   +D          + +   KE+   +V+W+        F F + P + 
Sbjct: 379 IVRKEMIPNIISSRDSLKYAKRGYKLYENN-KEIDPAKVNWHDERISKRAFYFVEAPSEN 437

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K   Y+  + Y+HDTP   LF N  R  + GC+RV     L   LL+ +  W  
Sbjct: 438 NSLGLVKFVLYNDMSIYLHDTPSKRLFGNTQRTYSHGCIRVEYPERLATKLLRGSEEWDA 497

Query: 366 YHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
             ++E + T      V+      +   Y++AW  ++  +  R+D Y  D   + I+  
Sbjct: 498 EKVKEAMTTGRDQRRVRPKQHFVIDVSYLTAWVDEEGKLIIRNDPYQFDKEQLKILNR 555


>gi|240139503|ref|YP_002963978.1| hypothetical protein MexAM1_META1p2949 [Methylobacterium extorquens
           AM1]
 gi|240009475|gb|ACS40701.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 648

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 95/415 (22%), Positives = 168/415 (40%), Gaps = 45/415 (10%)

Query: 22  MGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQ 77
                    ++ + +  +I         +       A        + S  P   +     
Sbjct: 198 YARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGAGAGDVLQSYNPR--QPGYLA 255

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERL----IISGDLDPSKGLS 131
            +K +A  +   ++G    +LP  P L LG S   V  LR R       +G LD + G +
Sbjct: 256 LKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEA 315

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR----IRQLQVNLMRIKKLL 187
            A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R + L 
Sbjct: 316 DAYDRAVADAVKNFQRSRGLPANGTLTRATVAALASSSVPKTSASEADILVNMERWRWLP 375

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G  YV VN+P   L+   +G++   + VIVG+    TP     +   + NP W +P
Sbjct: 376 PE-LGPNYVFVNVPEFKLKVFRDGQMRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVP 434

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI+++ + +         +     ++   G                    RQ PG+ NA
Sbjct: 435 PSILKQMLASG--------RTAGFEVVRRGGNI----------------SLRQPPGERNA 470

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   P+W++  
Sbjct: 471 LGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PSWTQER 527

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++++       ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 528 LKKLIGKG-ERTLRLPEKLPVHLAYFTAEVDDLGSYRTLSDLYGYDGPMKVALGL 581


>gi|163852171|ref|YP_001640214.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163663776|gb|ABY31143.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 646

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 96/415 (23%), Positives = 167/415 (40%), Gaps = 45/415 (10%)

Query: 22  MGLSLVEKPIHASVLDEIIN-ESYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQ 77
                    ++ + +  +I         +       A        +    P   +     
Sbjct: 196 YARDARGGRVNPAAISRLITPTLDLPPADTVLTRLAASGAAAGDVLQGYNPR--QPGYLA 253

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERL----IISGDLDPSKGLS 131
            +K +A  +   ++G    +LP  P L LG S   V  LR R       +G LD + G +
Sbjct: 254 LKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLDASAAGTLDSAPGEA 313

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR----IRQLQVNLMRIKKLL 187
            A+D  V  AVK FQ   GL  +G +  +T+ A+      +       + VN+ R + L 
Sbjct: 314 DAYDRSVADAVKNFQRSRGLPANGTLTRATVAALVNSSVPKTSASEADILVNMERWRWLP 373

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            + +G  YV VN+P   L+   +G+V   + VIVG+    TP     +   + NP W +P
Sbjct: 374 PE-LGPNYVFVNVPEFKLKVFRDGQVRDETRVIVGKPTSPTPTFSGMMEYAVVNPSWYVP 432

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI+++ + +         +     ++   G                    RQ PG+ NA
Sbjct: 433 PSILKQMLASG--------RTAGFEVVRRGGNI----------------SLRQPPGERNA 468

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +   K  F +++  Y+HDTP   LF+   R  + GCVRV +       +L   PTW++  
Sbjct: 469 LGFIKFMFPNQHAVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---PTWTQER 525

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +++++       ++L  ++PVH  Y +A        +   D+YG D      + L
Sbjct: 526 LKKLIGKG-ERTLRLPEKLPVHLAYFTAEVDDLGSYRTLPDLYGYDGPMKVALGL 579


>gi|333008910|gb|EGK28370.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-272]
 gi|333020220|gb|EGK39490.1| putative peptidoglycan binding domain protein [Shigella flexneri
           K-227]
          Length = 550

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 104/392 (26%), Positives = 164/392 (41%), Gaps = 54/392 (13%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     ++    S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALSTPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD--------- 125
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD         
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPG 275

Query: 126 ---------------------------------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                                            P+  +  A+D  +  AVK FQ   GL 
Sbjct: 276 DDTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLG 335

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G +  +T + +NV    R   L +N+ R++ L  +      ++VNIPA SL   +NG 
Sbjct: 336 ADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL--STGIMVNIPAYSLLYYQNGN 393

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +R DP YL+ +   
Sbjct: 394 QVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESHGYT 453

Query: 273 MIDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           ++        +   +VDW++    N  FR  Q PG  N++   K    S    Y+HDTP 
Sbjct: 454 VMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPN 513

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             LF    R  +SGCVRV    DL   LL+D 
Sbjct: 514 HNLFKRDTRALSSGCVRVNKASDLANMLLQDA 545


>gi|294011534|ref|YP_003544994.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
 gi|292674864|dbj|BAI96382.1| putative peptidoglycan binding domain protein [Sphingobium
           japonicum UT26S]
          Length = 484

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 98/385 (25%), Positives = 156/385 (40%), Gaps = 37/385 (9%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
             +             R+     S  P  +        K +A Y+ I   GGWP L    
Sbjct: 122 ARFDPRPGLAKAIAEDRLPQWALSLTPPYA--GYDGLRKGLANYERIRDAGGWPTLTA-- 177

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                SS  V   R R+ I          SV     +   ++  Q R+GL+P+G++D+ T
Sbjct: 178 ----QSSPDVV--RARIAIE-------DKSVTPGEKLVDVLQRAQRRYGLNPTGLLDART 224

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +NVPVD RI  +  N+ R + +  Q + +  V VNI AA L   E  +       + 
Sbjct: 225 LRELNVPVDDRIAAIMANMERWRWMPRQ-LPVNRVQVNIAAAVLTVFEGDQPVTSMRAVT 283

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G  D  TP+L S I+ I+ NP W +P SI ++++    R     L      ++       
Sbjct: 284 GAPDNATPMLVSSIHSIVVNPPWNVPASIAKRELWPKGR---AALIRQGYKIV------- 333

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                             Q  G  +A+   K +F +    Y+HDTP    F++  R  + 
Sbjct: 334 --------GTPETGERIVQPAGPNSALGRLKFDFNNPFAVYLHDTPSRAKFSSYDRLASH 385

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R+   + L   ++   P      I+ ++ T KT  V L  EV V+ +Y +A++  + 
Sbjct: 386 GCIRLEKPVPLAELMVASDPDL-AGKIQSLIDTGKTQRVSLPKEVAVYLLYWTAFAGNNG 444

Query: 402 IIQFRDDIYGLDNVHVGIIPLPEDH 426
            + FR D YG D +    I      
Sbjct: 445 TMNFRSDPYGWDKLLAAKIEASSRR 469


>gi|326336070|ref|ZP_08202242.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691579|gb|EGD33546.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 559

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 91/417 (21%), Positives = 169/417 (40%), Gaps = 18/417 (4%)

Query: 20  LPMGLSLVEKPIHASVLDEI-----INESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           +     L    +    + ++     I       +++       + D  +   I  +  + 
Sbjct: 141 ITASFLLFTNHLTRGRIPKVGDEKRIWRRNRPYLDNVELLLKLKDDDNLSLIIDALQPQ- 199

Query: 75  IAQTEKAIAFYQDILSRG--GWPELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKG 129
            +  +     Y+++       +P   I  L    +G +  ++  LR  L   G   P +G
Sbjct: 200 QSFYKAMAQKYRELEKDTAITYPLFSITDLKSYGIGYADSTILALRAHLEYKGYKSPVQG 259

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                D+ +  AVK FQ   G+   G+  + T+  + + +  +   L +N+ R++    +
Sbjct: 260 EPQQVDSLLIEAVKEFQRSIGIPADGIPGALTMNYLQMNIKQKRDLLLLNMERLRWQ-NK 318

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G  Y+LVNIP   L       +   + V+VG     TPI    +  I F P W +P+S
Sbjct: 319 DLGEDYILVNIPEYCLRLFHKDSLMFETRVVVGNPKTPTPIFSDSLRYIEFRPTWSVPQS 378

Query: 250 IIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NSPEPPNFIFRQDPGKI 305
           I++K+M+  +    D          + +   KE+   +V+W  +      F F +DP + 
Sbjct: 379 IVRKEMIPNIISSGDSLKYAKRGYKLYENN-KEIDPTQVNWKDDQLHKRIFYFVEDPSER 437

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K   Y+  + Y+HDTP   LF N  R  + GC+RV        +LLK +  W  
Sbjct: 438 NSLGLVKFVLYNDMSIYLHDTPSKRLFGNTQRTYSHGCIRVEYPDQFATYLLKSSEDWDE 497

Query: 366 YHIEEVVKTRKTT-PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
             + E + T K    V       +   Y++AW  K   +  R+D Y  D   + ++ 
Sbjct: 498 QKVREAMDTGKNQYRVHPKKHFVIDISYLTAWVDKKGNLIIRNDPYQFDKEQLKVLN 554


>gi|213963732|ref|ZP_03391982.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
 gi|213953612|gb|EEB64944.1| putative peptidoglycan binding domain protein [Capnocytophaga
           sputigena Capno]
          Length = 563

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 97/422 (22%), Positives = 177/422 (41%), Gaps = 23/422 (5%)

Query: 20  LPMGLSLVEKPIHASVLDEII---NESYHSIVNDRFD-------NFLARVDMGIDSDIPI 69
           +     L  K + +     I    +       + + +            +   I    P 
Sbjct: 143 ITASFLLFTKHLTSGRFTRIAYGKHTWRKPKYDAQKNINLLLHIGDKTSLAGIITPLFP- 201

Query: 70  ISKETIAQTEKAIAFY-QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
              +   Q +       Q ++      + P +    G ++  V +LR  L   G     +
Sbjct: 202 -HNKQYEQMKALYKQLKQQVVDTFITVDFPAKDFVYGYTAPIVVQLRNSLKQKGFEAAPE 260

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +   D+ +   V+ FQ  +GL   G++   TL  +N+        LQ+N+ R++    
Sbjct: 261 IEAQMVDSTLIRTVQRFQKSNGLTADGLLGKQTLYFLNMNKTRERDLLQLNMERMRVFNN 320

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             +G  Y LVNIP   L       +  ++ V+VGR +  TPI    I  + F P W +P+
Sbjct: 321 -DLGEHYALVNIPDFKLSLFHKDSLQFQTRVVVGRTETSTPIFTDTIRYVEFRPTWSVPQ 379

Query: 249 SIIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEVFVEEVDWN--SPEPPNFIFRQDPGK 304
           SII+K+M+  +  + DP+  +     M ++ GK+V    +DW   S     F F + P  
Sbjct: 380 SIIKKEMLPQIISQADPEKYQKRGYTMYEK-GKKVDPTTIDWTDPSVHKRGFHFVEAPSA 438

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD---TP 361
            N++   K    +  + Y+HDTP    F    R  + GCVRV+N  +L   LLK+     
Sbjct: 439 NNSLGLVKFILTNDMSIYLHDTPSKYFFQRDDRALSHGCVRVQNPNELAYHLLKNEATET 498

Query: 362 TWSRYHIEEVVKTRKTT-PVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            W+   + E +  +++   + L T+  ++ +Y +A+  ++  +  ++DIY LDN  +  I
Sbjct: 499 PWTLEKVNEAMNGKRSQYRIALKTKYKINILYYTAFIDENGELTLKNDIYDLDNEQLKEI 558

Query: 421 PL 422
             
Sbjct: 559 KR 560


>gi|42522877|ref|NP_968257.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574073|emb|CAE79250.1| putative peptidoglycan-binding protein [Bdellovibrio bacteriovorus
           HD100]
          Length = 526

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 24/383 (6%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSV 111
              +   + +D   P  S       + A+     +L  G W  +    +PL LG     +
Sbjct: 143 TSQSDAKLALDKMAPQFS--VYQSLKMALERLYPLLETGLWENITPAKKPLSLGKKDPVI 200

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS--STLEAMNVPV 169
            +L+ERL   G       ++  FD  +  A+   Q+   + P G++     T    +V +
Sbjct: 201 IKLKERLRQLGY--RIDSMNDTFDQDMLIAINDIQLNLKMKPDGVISPGGRTWRFFSVSL 258

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQT 228
             R+ QLQ ++ +++    Q +  R++ VN   +     +    + +    I G  +R+T
Sbjct: 259 LDRLSQLQADMEQLRWFP-QNLEDRHIFVNTAFSHFMMTDKKNNISMSFKAINGTAERKT 317

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ-----DPQYLKDNNIHMIDEK-GKEVF 282
           P L  RI  ++ NP W IP ++   D + +L++       +Y  DN   +      + + 
Sbjct: 318 PTLRDRITYLVMNPTWTIPPTVFLNDKVEILKKLDTKGIRKYFTDNRFEVYTADFSRTID 377

Query: 283 VEEVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
              +DW S +    NF  RQ P   NA+   K    +    Y+HDT +  LF    R  +
Sbjct: 378 PTSIDWKSIKSSSVNFYIRQKPSYNNALGVVKFMMTNPYAIYLHDTNQRDLFGEAQRLRS 437

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEE-VVKTR----KTTPVKLATEVPVHFVYISA 395
           SGCVR+   +DL  +LL  T  WSR  IE  VVK      K T V L   +PV+ V +++
Sbjct: 438 SGCVRLEKPLDLAEYLLAGT-QWSRPQIENFVVKEGQLVDKETRVDLKEPMPVYLVPVTS 496

Query: 396 WSPKDSIIQFRDDIYGLDNVHVG 418
               D +I+F +D+YG + + + 
Sbjct: 497 QMNSDGVIRFVEDVYGHNQLILS 519


>gi|34558804|gb|AAQ75149.1| conserved hypothetical protein [Alvinella pompejana epibiont 6C6]
          Length = 559

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 178/366 (48%), Gaps = 20/366 (5%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLII 120
           S  P+   +  +    A+  Y+ I ++   P +P       L  G+    + +++ERL +
Sbjct: 174 SLTPL--PKRHSDLIDALEIYRAIPTK--LPRIPYTRNFSGLKFGDVDRKIAKIKERLAM 229

Query: 121 SGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            GD     G   S  FD  ++SA+  ++ R  L+ +G++D  T+  MN P+ L I  +  
Sbjct: 230 EGDYPKESGAIYSDIFDEKLKSAIYRYKERFNLEQNGIIDKVTIYYMNKPISLLIDSIIT 289

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL ++K    +     +++VNIP  +++  ++G   L  + +VGR  R TPI HS++  +
Sbjct: 290 NLDKLKVSPNK-FPDEFIMVNIPDFTMDYYKDGISNLHMSAVVGRDKRPTPIFHSKMTYL 348

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE------ 292
             NP W IP ++++KD++  L ++P Y++ +NIH+      +  ++ +D N         
Sbjct: 349 ELNPNWNIPENLVRKDLIPTLIEEPDYMEKHNIHVFYGWKDKKEIKNLDINKLTRYLDEK 408

Query: 293 --PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                + F Q PG  NA+   K  F ++ + Y+HDT    LF    R  +SGC+R+    
Sbjct: 409 NGHIPYRFVQYPGDDNALGRIKFMFPNKYSVYLHDTDNKSLFERRYRVYSSGCMRISKPF 468

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   L     +     I+   +T K   ++    +PV+  Y + +  +D ++ FR DIY
Sbjct: 469 QLLEALKPHLKSSDIAQIDRYRQTLKNKIMRFTKSLPVYTTYFTVF-KRDGMVFFRKDIY 527

Query: 411 GLDNVH 416
           G D + 
Sbjct: 528 GYDKMI 533


>gi|288957909|ref|YP_003448250.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
 gi|288910217|dbj|BAI71706.1| peptidoglycan-binding domain 1 protein [Azospirillum sp. B510]
          Length = 434

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 93/321 (28%), Positives = 154/321 (47%), Gaps = 6/321 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              + LG+S   V RL +RL+  G L     ++  F A ++ AVK FQ+   + P G+V 
Sbjct: 81  GGLMKLGSSGERVGRLAQRLVELGLLPAD-KVAELFTADIDHAVKAFQLAQRMKPDGLVG 139

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           + T  A++         ++ + + ++           ++VN+   +   V  G+  L   
Sbjct: 140 AGTRAALDRTPAEAAALMRQSAVAMRSF-RDTAPDNVLVVNLTDQTTTLVRGGEEELTMR 198

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
            IVGR  R+TP+L  RI  I+ NP W +P +++++D + +LR        N I  +D  G
Sbjct: 199 AIVGRPSRETPLLTDRITHIIVNPTWTVPPTVLKEDKLPMLRAKGTPGIQNAIVYLD--G 256

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +EV  E VDW+   P      Q PG  NA+   +    +  + Y+H T EP LF   +R 
Sbjct: 257 QEVAPETVDWHDVTPGRVRIVQQPGNHNALGRFRFNLTNPYDIYLHGTNEPRLFARELRS 316

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVR+ +   L   LL+ + + +   I+ ++  ++   VKL T +PV FVY  A   
Sbjct: 317 ISSGCVRLEDPRRLAELLLQGS-SVTPERIDRMLDKQQPQWVKLPTPMPVQFVYWIATVE 375

Query: 399 KDSIIQFRDDIYGL-DNVHVG 418
            D  ++   DIY   D+    
Sbjct: 376 ADGAVRLHPDIYDRADDAPTA 396


>gi|42522720|ref|NP_968100.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
 gi|39573916|emb|CAE79093.1| putative periplasmic protein YcbB [Bdellovibrio bacteriovorus
           HD100]
          Length = 577

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 102/400 (25%), Positives = 184/400 (46%), Gaps = 31/400 (7%)

Query: 41  NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL--P 98
            E    I + + +     +  G+D   P   +      ++ +A+++ I + GGW ++   
Sbjct: 167 AELNQVISSVQANVSAKALVAGLDKFAPAHLR--YVDLKQLLAYFRSIQTAGGWSQIKLA 224

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  GN   ++  +R RL   G   PS G    +DA ++  ++  Q  +G+   G++ 
Sbjct: 225 KKSLRQGNQDPAIPAIRGRLQSLGYAVPSTG--DIYDAELKRVIEDVQGVNGMGVDGVIG 282

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           +  +  +N  V  R+ QL+VN+ +++ L +  M  R+V VN+     +  + G+  +   
Sbjct: 283 NEVMTFLNTSVADRVFQLEVNMEKLRWLPKA-MESRHVFVNLATTEFQFFDEGRKIMHFK 341

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ--YLKDNNIHMID- 275
            I G+  R+TP+L + ++ +  NP W  P SII KD +  LR      YL+ + + +I  
Sbjct: 342 TINGQSYRRTPVLRNMLSFVELNPTWTAPESIIFKDKINTLRGKDGQEYLRKHRMRLIRK 401

Query: 276 EKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
             GKEV   +    S    NF +  RQDP + NA+ S K    +  + Y+H T  P LF+
Sbjct: 402 SDGKEVIPSDELLQSLSRSNFPYLLRQDPWRKNALGSIKFPLPNEWSIYLHHTDNPDLFD 461

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPT---------WSRYHIEEVVKTRK-------- 376
              R  +SGCVR+ +      ++L++            W +  +E  V   K        
Sbjct: 462 ESKRHLSSGCVRLEDPFTFAEYILRNNVAVKSTQTDDYWPKDKLESFVPPEKSEAYVDRE 521

Query: 377 --TTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
                + L   VPV+ +Y++    +D  ++F  D+YG D 
Sbjct: 522 NWEKRIHLKVPVPVYLMYLTVDRAQDGAVRFVKDVYGQDE 561


>gi|149911416|ref|ZP_01900034.1| peptidoglycan binding domain protein [Moritella sp. PE36]
 gi|149805524|gb|EDM65529.1| peptidoglycan binding domain protein [Moritella sp. PE36]
          Length = 512

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 110/401 (27%), Positives = 181/401 (45%), Gaps = 27/401 (6%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
            L+L    I +      +  + ++  + R       +   IDS +P  +   + +  +AI
Sbjct: 108 ALTLELYHIASQSYGNQLKSAANNPDDFRTALINDTLPAYIDSAMPQFNA--VIRLRQAI 165

Query: 83  AFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYV 138
             Y+ I     WP+L       LG     V+ LR++LI   DL     SK     FD  +
Sbjct: 166 NKYKGI-KNIAWPKLTDSFNPQLGQGHAEVKILRKKLITFNDLRTVSTSKHRLHIFDQSI 224

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            + +K FQ R+GL P+G ++++T  A+N  +D RI +LQ+NL R   L  +    +Y++V
Sbjct: 225 INGLKHFQRRNGLKPTGRLNATTKNALNQNIDSRINKLQINLWRWLSLP-RIPPTKYIMV 283

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NIPA  L  ++ G+  +   VIVG+   QTPI+ + +N +  NP W   R+II  D++ L
Sbjct: 284 NIPAFDLRLIDKGEALMEMKVIVGKPSNQTPIMITEVNSVTLNPTWTPTRNIINNDLLPL 343

Query: 259 LRQDPQYLKDNNIHMIDEKG-----KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
             ++   L   N ++    G     +EV     +        +   Q PG  NA+ + + 
Sbjct: 344 HNKNHTALNSLNFYLAKGYGANTLYREVPPNLQEM----LKQYRLVQRPGSNNALGNVRF 399

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              + N  ++HDTP   LF    R  + GC+R+    DL   L           I +   
Sbjct: 400 NIKNNNAIFLHDTPTKYLFKRQNRAFSHGCIRLEKSDDLLTIL----------RINQRKN 449

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
              T  ++L   +PV   Y +AW      I +R+D+Y  D 
Sbjct: 450 NSGTKHLRLQQSLPVFITYQTAWIDNLGEINWRNDLYNKDK 490


>gi|322434022|ref|YP_004216234.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
 gi|321161749|gb|ADW67454.1| ErfK/YbiS/YcfS/YnhG family protein [Acidobacterium sp. MP5ACTX9]
          Length = 625

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 109/432 (25%), Positives = 184/432 (42%), Gaps = 68/432 (15%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELPI--RPLHLGNSSVSVQRL 114
            V   I S  P   +    +TEKA+A Y D+  + G P  LP   +P+  G    + + L
Sbjct: 184 DVPKLIASVEPDSDQ--YRETEKALAHYNDLAKQQGTPEPLPAVDKPITSGGHYPAAEAL 241

Query: 115 RERLIISGDLDPSKGL-------------------------------------------- 130
             RL + GDL                                                  
Sbjct: 242 AARLQLEGDLAGEPTAPEAPAPAPAPEAPKPTRTAAARASIGKAFARARGKSQAAPAATE 301

Query: 131 ---------SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
                    S  + A +  AVK +Q RH L  +G + ++T+ ++NVP+  R +QL  +L 
Sbjct: 302 AAAPPAHVPSTVYTADLADAVKHYQSRHSLTANGQLTAATVTSLNVPLTARSQQLADSLE 361

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRV--DRQTPILHSRINRI 238
           R++ L +  +    + VN+P   L    E+ +   +  V+VG+V  + QTP+    +  +
Sbjct: 362 RLRWLPDPYLHAP-LQVNLPEFVLRGFGEDHQQQFKMNVVVGQVVGEHQTPVFTHMMKYV 420

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           +F P+W +P SII+K++   + +    YL+ +N   +D KG  V        S E    +
Sbjct: 421 IFRPFWNVPVSIIKKELAGHIAKSGVGYLEAHNFETVDAKGAHVNASA---ESIERGGVV 477

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            R+ PG  N++   K  F +  + Y+H TP   LF    R  + GCVRV +   L VW+L
Sbjct: 478 VREKPGPKNSLGLIKFMFPNEYDIYLHSTPAQQLFARSRRDFSHGCVRVEHPDQLAVWVL 537

Query: 358 KDTPT-WSRYHIEEVVKTR-KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           ++TP  W    + + ++       V L  ++P+   Y +A   ++  + F DDIY  D  
Sbjct: 538 QNTPRNWDLQKVTDAMQNGADNHQVNLTKQIPIVIFYATARVDENGQVDFFDDIYHYDKQ 597

Query: 416 HVGIIPLPEDHP 427
              ++     +P
Sbjct: 598 LEDVLAKGMPYP 609


>gi|148258072|ref|YP_001242657.1| hypothetical protein BBta_6864 [Bradyrhizobium sp. BTAi1]
 gi|146410245|gb|ABQ38751.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 702

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 86/333 (25%), Positives = 148/333 (44%), Gaps = 30/333 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S   V +LR +L ++          + +DA V +AV+ FQ    L P+G++D  T++A+
Sbjct: 329 MSDPRVPKLRAKLGLT-----ENADDIRYDAKVAAAVRKFQESADLKPTGVLDDRTVKAL 383

Query: 166 NVPVDLR-IRQLQVNLMRIKKLLEQK----MGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P   + I  + VN+ R + L        +G  YV++NIP  +L+ ++ G     + V+
Sbjct: 384 NTPKRDKQIDTILVNMERWRWLPRDLGAPALGDAYVILNIPDYTLKVMQRGAQVWTTRVV 443

Query: 221 VGRVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            G+     TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +  
Sbjct: 444 TGKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARD- 502

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                          +    Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 503 --------------GSIHISQPPGEANALGRIRFNFPNKFLVYQHDTPDKHLFAREDRAF 548

Query: 340 TSGCVRVRNIIDLDVWLLK---DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           + GC+RV+        LL        ++   I  +  +     +K  T +PV+  Y +A+
Sbjct: 549 SHGCMRVQYPDQYASVLLNIAMPGERYTPERIRSMYGS-SEIDLKFPTPIPVNITYQTAF 607

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPID 429
                 +QFR D+YG D   + I+       ++
Sbjct: 608 VDDAGKLQFRKDVYGRDATMISILKNGRGKDLE 640


>gi|188582120|ref|YP_001925565.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179345618|gb|ACB81030.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 662

 Score =  290 bits (741), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 98/368 (26%), Positives = 162/368 (44%), Gaps = 40/368 (10%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERL----IISGDLD 125
           +      +K +A  +   ++G    +LP  P L LG S   V  LR R       +G LD
Sbjct: 265 QPGYLALKKRLAGLRAGRTQGAPSVKLPDGPVLKLGMSDPRVPLLRSRFGLEKQAAGTLD 324

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR----IRQLQVNLM 181
            + G + A+D  V  AVK FQ   GL  SG +  +T+ A+  P   +       L VN+ 
Sbjct: 325 AAPGEADAYDGAVADAVKSFQRSRGLPASGTLTRATVAALANPSVPKTAASEADLLVNME 384

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R + L  + +G  YV VN+P   L+   +G +   + VIVG+    TPI    +   + N
Sbjct: 385 RWRWLPAE-LGPDYVFVNVPEFKLKVFRDGHLRDETRVIVGKPTSPTPIFSGMMEYAVVN 443

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P SI+++ + +         +     ++   GK +                 RQ 
Sbjct: 444 PSWYVPPSILKQMLASG--------RTAGFEVVRR-GKTIS---------------LRQP 479

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG+ NA+   K  F ++++ Y+HDTP   LF+   R  + GCVRV +       +L   P
Sbjct: 480 PGERNALGFIKFMFPNQHSVYLHDTPNRSLFSASTRAFSHGCVRVDDPFRFADAVL---P 536

Query: 362 TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           TW+   +++++       ++L  ++PVH  Y +A        +   D+YG D      + 
Sbjct: 537 TWTEERLKKLIGKG-ERTLRLPEKLPVHLAYFTAEVDDLGSYRTLTDLYGYDGPMKAALG 595

Query: 422 L-PEDHPI 428
           L P    +
Sbjct: 596 LAPRSEAV 603


>gi|167624211|ref|YP_001674505.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354233|gb|ABZ76846.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 444

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 16/398 (4%)

Query: 21  PMGLSLVEKPIHASVLDEIIN--ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
            +   L         ++E++N       +    F        + ++  + ++ ++ I   
Sbjct: 46  ALAFDLNAGE----SVNELMNMVNLARLLDRQVFWGSSEHQSLSVEQYLNLVERKDIQSL 101

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFD 135
            K I  Y+ +  R  WP +    L LG  +  V +LR  L   GD+ P          FD
Sbjct: 102 RKLIKHYRSL-ERYQWPTVAPMELRLGLRTKEVAKLRWILTQVGDITPYSIPAYRESIFD 160

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             VE+ +KLFQ RHG    G + S TL ++N    +R+ QLQ  L +   L        Y
Sbjct: 161 PSVEAGLKLFQRRHGHAVDGKLGSQTLLSLNTEPSIRVAQLQNALKQR--LKRFDEAKDY 218

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           VLVN+   +L   +NG   L   VIVG+   +TP L++ I+ I  NP W  P SII +D+
Sbjct: 219 VLVNLMDHTLRITKNGVEQLVMPVIVGKPTSKTPELNTTISVITVNPSWTPPASIIYQDI 278

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN----SPEPPNFIFRQDPGKINAMAST 311
           +  + + P YL++N+      + K +       +      +    +  Q PG  NA+   
Sbjct: 279 LQSVDKQPNYLRNNDFAFKSNETKHIDHNVAGMDPKSLKNKLKKSVLVQLPGTKNALGKY 338

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           +    + +  ++HDTP   LF    R  + GC+R+        +L+   P  +R   +  
Sbjct: 339 RFTIPNSDAIFLHDTPSKHLFKRQNRALSHGCIRLSQPALFAQYLINKEPAETRLKFKNA 398

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
           VK+++T   +L +++ +  +Y + W  KD  +Q R  I
Sbjct: 399 VKSKQTRHFRLTSQLSIDVIYQTVWIDKDGSLQVRGTI 436


>gi|319957846|ref|YP_004169109.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319420250|gb|ADV47360.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 575

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 177/377 (46%), Gaps = 16/377 (4%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRE 116
            +   +   +P+  +    +    +A Y+ + +   +P+L   R L + ++   + +++ 
Sbjct: 182 ELAPYLRKQLPLEPR--YRKLLALLAKYRTMPN---FPKLSYGRTLRINSTDSRIPQIKR 236

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            L   GD          FD     A++ F+ R  L P   VD+  ++A+N      +R++
Sbjct: 237 MLKFFGDYPKHFAEDNQFDRPFAQAIRSFRSRFKLPPGNTVDNKVIQALNTTKKEYLRKI 296

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            VNL ++K L   +    YV VN+P   +    NG+    S V+VGR+DR TPI  S++ 
Sbjct: 297 LVNLEKLK-LYPHRWEPDYVEVNVPEFKMRFYRNGQPIFSSDVVVGRIDRPTPIFDSKMT 355

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW-------N 289
            ++ NP W IP +++++D++ +L+++P YL+ +NIH+           E+D+       +
Sbjct: 356 YMVLNPTWTIPDNLVRRDLIPMLKKEPDYLQKHNIHVYTSYKPNAPEVELDFEKLFSYEH 415

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
              P  + F Q P   NA+   K  F ++ + Y+HDT    LF    R  +SGC+RV   
Sbjct: 416 DTRPIPYRFVQFPSDQNALGRVKFMFPNKYSVYLHDTDNKKLFGYRYRVFSSGCMRVAKP 475

Query: 350 IDLDVWLLKDTPT-WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
            D    LL      +S   I+E++ + K T ++L   +PVH VY +          F  D
Sbjct: 476 FDFMDLLLHYARGNYSEGKIQEILASNKPTTIRLKKAIPVHIVYFTVRREGK-KDYFFYD 534

Query: 409 IYGLDNVHVGIIPLPED 425
           IY  D +    +   + 
Sbjct: 535 IYLYDKMIWESMEGHKK 551


>gi|146338286|ref|YP_001203334.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146191092|emb|CAL75097.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 691

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 89/333 (26%), Positives = 153/333 (45%), Gaps = 30/333 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S   V +LR +L ++ +LD      + +DA V +AV+ FQ    L P+G++D  T++A+
Sbjct: 317 MSDPRVPKLRAKLGLTENLD-----DIRYDAKVAAAVRKFQDSVDLKPTGVLDDRTVKAL 371

Query: 166 NVPVDLR-IRQLQVNLMRIKKLLEQK----MGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           N P   + I  + VN+ R + L  +     +G  YV++NIP  +L+ +++G     + V+
Sbjct: 372 NTPKRDKQIDTVIVNMERWRWLPRELGAPAIGNAYVILNIPDYTLKVMQHGAQVWTTRVV 431

Query: 221 VGRVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            G+     TP+L   +  I  NP W +P SII  + +  L+QDP  L    + +   +  
Sbjct: 432 TGKPGQHATPLLSETMKFITVNPTWNVPPSIIYNEYLPALQQDPTVLDRMGLRLERARD- 490

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                          +    Q PG+ NA+   +  F ++   Y HDTP+  LF    R  
Sbjct: 491 --------------GSIHISQPPGEANALGRIRFNFPNKFLVYQHDTPDKNLFAKEDRAF 536

Query: 340 TSGCVRVRNIIDLDVWLLKDT---PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           + GC+RV+        LL  T     ++   I   +       +K  T +PV+  Y +A+
Sbjct: 537 SHGCMRVQYPDQYASVLLNLTMPGERYTPERIRG-MYGSSEIDLKFPTPIPVNITYQTAF 595

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPID 429
                 +QFR D+YG D   + I+       ++
Sbjct: 596 VDDAGKLQFRKDVYGRDATMIAILKNSRGKDLE 628


>gi|332878616|ref|ZP_08446336.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
 gi|332683517|gb|EGJ56394.1| peptidoglycan binding domain protein [Capnocytophaga sp. oral taxon
           329 str. F0087]
          Length = 568

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 88/318 (27%), Positives = 155/318 (48%), Gaps = 11/318 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G ++  +++LR+ L   G    ++      D+ +   V+ FQ   GL P G++   TL  
Sbjct: 241 GYTAPVIEKLRKGLKQKGFEAIAEADPQTVDSTLIRTVQRFQESKGLTPDGVLGKQTLYF 300

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +N+        L++N+ R++      +G  Y +VNIP   L   E   V   + V+VG+ 
Sbjct: 301 INMNDTRTRDLLKLNMERMRVFNNY-LGDHYAIVNIPDFKLLLFEKDSVLFETRVVVGKS 359

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEVF 282
              TPI    I  + F P W +P+SII+K+M+  +  + +P+  K+    M +  GK+V 
Sbjct: 360 ATSTPIFTDTIQYVEFRPTWSVPQSIIKKEMIPQIVSQANPEKYKNRGYTMYE-NGKKVD 418

Query: 283 VEEVDWN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
             +V+WN  +     F F + P   N++   K    +  + Y+HDTP    F+   R  +
Sbjct: 419 PTQVNWNDPAVHKRGFYFVEAPSANNSLGLVKFILTNGMSIYLHDTPSKHFFDRDYRALS 478

Query: 341 SGCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTT--PVKLATEVPVHFVYISA 395
            GC+RV+N  +L   LLK+      W+   + E ++  K +   + L T+  V+ +Y +A
Sbjct: 479 HGCIRVQNPSELAYHLLKNEESQTPWTIEKVTEAMQNTKRSQYRIALKTKYKVNIIYYTA 538

Query: 396 WSPKDSIIQFRDDIYGLD 413
           W   +  +  ++DIY LD
Sbjct: 539 WVDNNGEVVIKNDIYELD 556


>gi|307294368|ref|ZP_07574212.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306880519|gb|EFN11736.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 485

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 95/385 (24%), Positives = 156/385 (40%), Gaps = 37/385 (9%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
             +             ++     +  P  +        K +A Y+ I   GGWP L    
Sbjct: 123 APFDPRPGLAKAISENKLPQWALNLTPPYA--GYDGLRKGLANYERIRDAGGWPTLTA-- 178

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                S+  V   R R+ I          SV     +   ++  Q R+GL+P+G++D+ T
Sbjct: 179 ----QSAPDVV--RARVAIE-------DKSVTPGEKLVDVLQRAQRRYGLNPTGLLDTRT 225

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           L  +NVPVD RI  +  N+ R + +  Q + +  V VNI AA L   E  +       + 
Sbjct: 226 LRELNVPVDDRIAAIMANMERWRWMPRQ-LPVNRVQVNIAAAVLTVFEGDEPVTSMRAVT 284

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G  D  TP+L S I+ I+ NP W +P SI ++++    R     L      ++       
Sbjct: 285 GAPDNATPMLVSSIHSIVVNPPWNVPASIAKRELWPKGR---AALIRQGYKIV------- 334

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                             Q  G  +A+   K +F +    Y+HDTP    F++  R  + 
Sbjct: 335 --------GTPETGERIVQPAGPNSALGRLKFDFNNPFAVYLHDTPSRAKFSSYDRLASH 386

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R+   + L   ++   P      I+ ++ T KT  V L  EV V+ +Y +A++  + 
Sbjct: 387 GCIRLEKPVPLAELMMAGNPDL-AGKIQSLIDTGKTQRVSLPREVAVYLLYWTAFASNNG 445

Query: 402 IIQFRDDIYGLDNVHVGIIPLPEDH 426
            + FR D YG D +    I      
Sbjct: 446 TMSFRSDPYGWDKLLAAKIEASSRR 470


>gi|237757093|ref|ZP_04585533.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237690747|gb|EEP59915.1| peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 506

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/437 (24%), Positives = 199/437 (45%), Gaps = 35/437 (8%)

Query: 7   INKILYCFFVY------------LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDN 54
           +N   Y FF+             L L + L L    I    + E  N        +++  
Sbjct: 77  LNPSNYNFFLSRNPVKDEIELSKLTLKICLDLYNGTIDPKDIFETWNLPKKKF--NKYKE 134

Query: 55  FLARVDMGIDSDIPIISK---ETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSV 109
               +      ++P + +   E      + ++ Y +I++   +P LP   + L       
Sbjct: 135 LATIIKENQLENLPQLCQPNHEGYLTLRQYLSKYYEIMA--LYPSLPKINKKLKPKMKDK 192

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V++LR+ L I G  D +   S  +D  +  +VK FQ    L+  G++   TL  +N P+
Sbjct: 193 EVKKLRQLLYIYGFYDGN-TNSYIYDDELLESVKRFQESRNLEADGVIGVKTLNELNRPL 251

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD---- 225
           +  I  +++N+ + + L  + +    + VNIP+  L+  E+    L + VIVG+      
Sbjct: 252 NELIDIIKINMEKYRWLP-ENLAESRIEVNIPSFELKYYEDNTEILSTEVIVGKNYEEDF 310

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
           R TPI + +I +I  NPYW +P+ I  KD++  ++ +P++L+D +  +    G+EV  ++
Sbjct: 311 RPTPIYYGKIEKITINPYWYVPKKIAAKDILKKIKSNPRFLEDFSFKVFY-NGQEVDYKK 369

Query: 286 VDW--NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           ++W   +     F   Q PG  N +   KI F +    Y+HDTP   LF +  R  +SGC
Sbjct: 370 INWWEYNENNFGFTLIQSPGNKNFLGRIKITFSNPFQVYLHDTPFKELFKHKKRAFSSGC 429

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +RV + + L  ++L       +  I   + + KT  +    ++ V+  Y +A    D  I
Sbjct: 430 IRVNDPLSLTSYILNK----DKSEILNYIDSNKTIGLTPCKDIYVYIFYFTALVKND-TI 484

Query: 404 QFRDDIYGLDNVHVGII 420
            F +D+Y  D   + I+
Sbjct: 485 YFYEDLYNFDIKILNIM 501


>gi|188995993|ref|YP_001930244.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931060|gb|ACD65690.1| Peptidoglycan-binding domain 1 protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 506

 Score =  286 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 102/435 (23%), Positives = 195/435 (44%), Gaps = 31/435 (7%)

Query: 7   INKILYCFFVY------------LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDN 54
           +N   Y FF+             L L + L L    I+   +    N        +++  
Sbjct: 77  LNPSNYNFFLSRNPVKDEIELSKLTLKICLDLYNGTINPKEIFRTWNLPKKKF--NKYKE 134

Query: 55  FLARVDMGIDSDIPIISKETIA---QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSV 111
               +      ++P + +         +K ++ Y +I++   +     + L        V
Sbjct: 135 LANIIKENQLENLPELCQPNYDGYLALKKYLSKYHEIIASNPYLPKINKKLKPKTKDKEV 194

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           ++LR+ L I G  + +   S  +D  +  +VK FQ    L+  G++   TL  +N P++ 
Sbjct: 195 KKLRQLLYIYGFYNGN-TNSDVYDDELLESVKRFQESRNLEADGIIGVKTLSELNRPLNE 253

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD----RQ 227
            I  +++N+ + + L  + +    + +NIP+  L+  EN    L + VIVG+      R 
Sbjct: 254 LIDIIKINMEKYRWLP-ENLAENRIEINIPSFELKYYENDIEVLSTEVIVGKNYEEDFRP 312

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TPI + +I +I  NPYW +P+ I  KD++  ++ +P++L+D    +    G+EV  ++++
Sbjct: 313 TPIYYGKIEKITLNPYWYVPKKIAAKDILKKIKSNPRFLEDFGFKVFY-NGQEVDYKKIN 371

Query: 288 W--NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W   +    NF   Q PG  N +   +I F +    Y+HDTP   LF    R  +SGC+R
Sbjct: 372 WRKYNESNFNFTLIQSPGDKNFLGRIRITFSNPFQVYLHDTPFKELFKQKRRAFSSGCIR 431

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           + + + L  ++L       +  I   + + KT  +  +  + V+  Y +A    D  I F
Sbjct: 432 INDALSLTSYILNK----DKNEIVNFINSNKTLDLVPSKNIYVYIFYFTALVKND-TIYF 486

Query: 406 RDDIYGLDNVHVGII 420
            +D+Y  D   + ++
Sbjct: 487 YEDLYNFDKKILNLM 501


>gi|94498521|ref|ZP_01305077.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
 gi|94422064|gb|EAT07109.1| peptidoglycan binding domain protein [Sphingomonas sp. SKA58]
          Length = 484

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 93/369 (25%), Positives = 158/369 (42%), Gaps = 37/369 (10%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
            +D   +   P  +        + +A Y+ I  +GGW  L            S   +R+R
Sbjct: 137 DLDRWANRLTPPWA--GYETLRQGLARYEAIRDQGGWQSLSASS--------SSDAIRKR 186

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            I   D   S       D  +   ++  Q R+GL+P+G +D+ TL A+NV VD RI  + 
Sbjct: 187 -IAMEDPSVSP------DEKLADIIQRAQRRYGLNPTGNLDARTLAALNVGVDDRIAAIM 239

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            N+ R + +  + + +  V VNI AA L   E  +       + G  D QTP+L S I+ 
Sbjct: 240 ANMERWRWMP-RSLPVNRVQVNIAAAVLTLFEGDQPVTSMRAVTGSPDNQTPMLSSSIHS 298

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           I+ NP W +P SI ++++    R     L      ++                       
Sbjct: 299 IVVNPPWNVPMSIARRELFPKGRAT---LIRQGYKIV---------------KTPEGGER 340

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             Q  G  +A+   K +F +    Y+HDTP    F++  R  + GC+R+   + L   ++
Sbjct: 341 IVQPAGPNSALGRLKFDFNNPFAVYLHDTPARGKFSSYDRLASHGCIRLEKPVALAEQMV 400

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV 417
             +P  +   I+ ++   KT  V L  +V V+ +Y +A++  D ++ FR+D YG D +  
Sbjct: 401 AASPDLN-GQIQNLIDEGKTQRVSLPQDVAVYLLYWTAFANGDGVVSFRNDPYGWDKLLA 459

Query: 418 GIIPLPEDH 426
             I      
Sbjct: 460 QKIEASSSR 468


>gi|197105669|ref|YP_002131046.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
 gi|196479089|gb|ACG78617.1| peptidoglycan-binding domain 1 [Phenylobacterium zucineum HLK1]
          Length = 605

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 99/401 (24%), Positives = 166/401 (41%), Gaps = 26/401 (6%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           G  + E  + A V   ++  +             A +   +++ +   +   +   ++A+
Sbjct: 205 GPKVGEGELLAFVDPRLLPRAGRGRAALEAAAEAASLQEHLEAALAARNP-IVENLDRAL 263

Query: 83  AFYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
             Y+      G PE+     R L  G     V  LR RL +            A+D  +E
Sbjct: 264 ERYR--AQWSGLPEIFIPAGRELAPGVRDPRVDLLRLRLGL-------PDTGGAYDEVLE 314

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            AV+ FQ  HGL  +G  D +TLEA+N       R ++ NL R   L     G R++LV+
Sbjct: 315 GAVRAFQRAHGLPDTGRADRTTLEALNAGAAHYERLVEANLERASALPA-SFGERFILVD 373

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL- 258
             A  L   ++G+      V+ G+  + TP++   ++ ++FNPYW +P  ++Q  +    
Sbjct: 374 AAAGQLWYYDHGQQLAAMKVVTGKPSQPTPMMVGMVSHLIFNPYWNVPEDLVQTSIAPKV 433

Query: 259 LRQDPQYLKDNNIHM---IDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKI 313
           L     Y+++  + +          +    VDW +          RQ PG  N M   K+
Sbjct: 434 LEHGLGYIEEEGLEVLSDYTADAVVLDPAAVDWRAVAAGALSVRVRQKPGPKNMMGKVKL 493

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +    Y+HDTP    F    R  +SGCVR+ + + L   L       +   +     
Sbjct: 494 MLPNPLGIYLHDTPHRGDFARSQRLASSGCVRLEDAMSLARLLAGGDKAEAALAV----- 548

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
             +   + LA   PV+  Y++A    D  I FR D+YGLD 
Sbjct: 549 GGEERRIDLAEPAPVYITYLTAAPTSDGFI-FRPDVYGLDA 588


>gi|220920262|ref|YP_002495563.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944868|gb|ACL55260.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 670

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 97/411 (23%), Positives = 157/411 (38%), Gaps = 39/411 (9%)

Query: 28  EKPIHASVLDEIINE-SYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQTEKAIA 83
              I  S L  +I         +       A        + S  P  S+      +  +A
Sbjct: 192 GGRIEPSRLSRLITPKLDLPSADAVLPRLAAAGPGANAVLQSYNP--SQTGYLALKAKLA 249

Query: 84  FYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             +     GG P +       L  G     V  +R R    G        +    A V  
Sbjct: 250 ALRS-QRPGGVPMVRLPKGPTLKPGMRDARVPLIRAR---FGLGPADDATAYD--AAVAG 303

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           AV+ FQ   GL  +G+++  T+ A+  P    +   L  N+ R + L    +G  +V VN
Sbjct: 304 AVERFQRERGLAATGILNPETVAALAGPSPGRQEADLLANMERWRWLPA-DLGKTHVWVN 362

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           IP   +  V   +V   + VIVG+ D  TP+    +   + NP W +P SI++ + +  L
Sbjct: 363 IPEYKVRVVSGTRVVDEARVIVGKPDSPTPVFSGEMTYAVVNPSWNVPPSILKNEFLPRL 422

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
            +DP Y       ++                        RQ PG+ NA+   K  F + +
Sbjct: 423 ARDPTYAARLGYEVVRR----------------GNGIAIRQPPGERNALGFIKFMFPNDH 466

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP   LF    R  + GCVRV +       +L   PTW    ++ ++       
Sbjct: 467 AVYLHDTPNRALFARSARALSHGCVRVDDPFRFAEVVLG--PTWPTERLKRLIGKG-ERT 523

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYG---LDNVHVGIIPLPEDHP 427
           V L  ++PVH  Y +  + +   ++  DD+YG      + +G+   P   P
Sbjct: 524 VMLPEKLPVHLAYFTLVADEAGTLRQFDDLYGINARVKMALGLSNEPLPAP 574


>gi|120554149|ref|YP_958500.1| hypothetical protein Maqu_1223 [Marinobacter aquaeolei VT8]
 gi|120323998|gb|ABM18313.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 318

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 90/278 (32%), Positives = 143/278 (51%), Gaps = 5/278 (1%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +  H L+  G+V   T  AMNVPV +RI Q++VNL R + +L       +VLV+I    +
Sbjct: 41  KQHHLLEEDGIVGRQTRAAMNVPVSVRIDQIRVNLERARWML-HGEAEEFVLVDIAGYRI 99

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                     RS ++VG+  R+TP L S I  +  NP W +P +I  +DM+  +R+D  Y
Sbjct: 100 SYFRPNGEIWRSRIVVGQPYRRTPSLRSMITHLTVNPTWTVPPTIFSEDMLPRIRRDITY 159

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L   N+ +++  G+ +    +DW    P   + RQDPG  NA+    + F + +  Y+HD
Sbjct: 160 LDRQNLSVLNFYGQWLDPNSIDWW--NPGGIMLRQDPGPTNALGQVVLRFPNNHLVYLHD 217

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   LF+  +R  +SGC+RV+ +++L   LL+DT   +   I  V+   +T  + L   
Sbjct: 218 TPSQGLFSRQLRAFSSGCIRVQGVLELAQLLLEDT--DTAADINSVIAEGETRNIHLKRS 275

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           VPV   Y +     D  + FR D+Y  D   +  +  P
Sbjct: 276 VPVILHYWTVHPGMDRELVFRPDVYQHDASLLRALDRP 313


>gi|42522163|ref|NP_967543.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
 gi|39574694|emb|CAE78536.1| putative periplamic protein [Bdellovibrio bacteriovorus HD100]
          Length = 505

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 93/391 (23%), Positives = 172/391 (43%), Gaps = 27/391 (6%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI--R 100
                +           ++ ++S  P   +        ++    +      WP LP   +
Sbjct: 111 PTALELETALAAAGQNPNVLLESMSPQSPQ--YLALRDSLRKLNNACVNNLWPALPKVKK 168

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS- 159
            L LG+    +  L+ R+   G   P   L   FD  V +AV   Q      P   +   
Sbjct: 169 TLKLGSKDAILIPLKTRMTQLGY--PMTSLDNVFDDKVVAAVNDIQWNLRFKPDSKISPG 226

Query: 160 -STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE---NGKVGL 215
             T + +NV    R+RQ+++++ +++   +     RY+ +N+  +    V+    G   +
Sbjct: 227 GKTWKYLNVSCQDRMRQIRLDMEKLRWFPQH-FEDRYIFINLAMSYFSLVDKSGGGFYSM 285

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR-----QDPQYLKDNN 270
               I GR +R++P +  +I  I+ NP+WV+P +I ++D +  ++     +  +Y    +
Sbjct: 286 SFRTINGRPERKSPTMKDKIVYIVINPFWVVPPTIFREDKVEEIKNLWPWEIREYFDTRH 345

Query: 271 IHMIDEK-GKEVFVEEVDWNSPEPP---NFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
             + ++   +      +DW + +P    N   RQ P ++NA+ S K    +    Y+HDT
Sbjct: 346 YQVWNKSFTQRFDPASIDWYNMDPNQDANIYIRQSPHRMNALGSLKFMMTNSYAIYLHDT 405

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT-----RKTTPVK 381
            +  LF    R  +SGCVRV   +DL  +LLK T  W R  IE  +        K T V+
Sbjct: 406 NQRELFAEPHRLLSSGCVRVEKPVDLAEYLLKGTE-WDRAAIERYMAKPGEVLDKDTKVQ 464

Query: 382 LATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
           L  ++PV+ V++++    D I++F +D Y  
Sbjct: 465 LKQQMPVYMVFLTSQLSSDGILRFAEDSYRQ 495


>gi|213420016|ref|ZP_03353082.1| hypothetical protein Salmonentericaenterica_20520 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 546

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/376 (26%), Positives = 156/376 (41%), Gaps = 53/376 (14%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 276

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 277 DNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGA 336

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 337 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 394

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 395 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 454

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    S +  Y+HDTP  
Sbjct: 455 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNH 514

Query: 330 ILFNNVVRFETSGCVR 345
            LF    R  +SGCVR
Sbjct: 515 NLFQRDARALSSGCVR 530


>gi|332186707|ref|ZP_08388450.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332013359|gb|EGI55421.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 476

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 98/413 (23%), Positives = 158/413 (38%), Gaps = 32/413 (7%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFDNF--LARVDMGIDSDIPIISKETIA 76
           L    +L       + L E+         +     N      +   +D   P  S     
Sbjct: 81  LRFASALARGATDPTKLYEVYTIPRPSPDLKAGLANALRSGDLTKWLDGLAPQDS--NYK 138

Query: 77  QTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +   A    +          +     +  G S   +  +   L+I   L P       + 
Sbjct: 139 KLSDAYLKLKQQPQGNDGQVVDTGEAIKPGASDPRMPAIVRELVILDYLTPDAAQGDRYT 198

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +  AV+  Q  +G+ P G++ +  L  +N+    R R + V + R++ L E+      
Sbjct: 199 PAIGDAVRRMQADYGMKPDGIIGNEALAILNMSDADRARAIAVAMERLRWL-ERTPPATR 257

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNI AA L    +GK+     V+VG  D +TP L S I R++ NP W +PRSI +K++
Sbjct: 258 IDVNIAAARLSYWRDGKIVDSRRVVVGEPDTETPQLGSPIFRLVANPTWTVPRSIQKKEL 317

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                    YL+ NN+ + D                        Q PG  N++   K + 
Sbjct: 318 AQKGA---GYLRANNMELKDGW--------------------IVQQPGPKNSLGLAKFDM 354

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            + +  Y+HDTP   LF  V R  + GCVRV + +     L KD             +T 
Sbjct: 355 QNDHAIYLHDTPAKPLFAMVQRQRSHGCVRVEDALGFAEMLAKDEGVVD--EWHRARETG 412

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPI 428
           K T VKL  ++PV  +Y +    KD     R+D YG D+     +       +
Sbjct: 413 KETFVKLPRQIPVRLLYQTVLFDKDGEPIVRNDPYGWDDRVGSALGFKAGKAL 465


>gi|163752572|ref|ZP_02159755.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
 gi|161327545|gb|EDP98746.1| hypothetical protein KT99_11874 [Shewanella benthica KT99]
          Length = 371

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 101/342 (29%), Positives = 172/342 (50%), Gaps = 12/342 (3%)

Query: 23  GLSLVEKPIHASVLDEIINESYH-----SIVNDRFDNFLA-RVDMGIDSDIPIISKETIA 76
            L+L  K +  + ++ I +E         I  +  +   +  +     S  PI   +   
Sbjct: 33  ALTLEPKELKLARVERIKSELQQFWASLGIPTNAMNMKDSKNLLQQALSLEPI--SKDYL 90

Query: 77  QTEKAIAFYQDILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
            T   I +   +  +  W E +    L  G++   V  +  RL   GDL     +S  FD
Sbjct: 91  ATSNNIRYLLWLDQKMDWNELVSNSWLKQGDNHSLVPEISRRLNGLGDLGEYDSVSTLFD 150

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           A V++AV+ FQ RHGL   G++   T+  +N+    R   L +N +  K      +   +
Sbjct: 151 ANVKNAVRHFQQRHGLKIDGIIGPETIRWINITPVKRAELLAINFIN-KTRYLASIEPIF 209

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++NIPA  LE ++NG+V L+S VIVG+  RQTP+L SRI+ ++ NP W +PRS++ +D+
Sbjct: 210 LIINIPAFELELIDNGQVALQSRVIVGKPYRQTPLLISRISNLVINPSWRVPRSLLIRDL 269

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKI 313
           +  +R+D  Y++  N ++ D +G+ V     +W       F +R  Q PG+ N +   K 
Sbjct: 270 LPKVREDGGYIQAGNFNVFDNQGQMVSKTAQEWQDLAHGRFPYRLVQQPGEGNTLGRYKF 329

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            F ++ + Y+HDT +  LF+   R  +SGC+R+ N+  L  W
Sbjct: 330 YFENKYSVYLHDTADKELFDESNRALSSGCIRIENVEGLANW 371


>gi|256425547|ref|YP_003126200.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256040455|gb|ACU63999.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 553

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 100/356 (28%), Positives = 167/356 (46%), Gaps = 10/356 (2%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           + +  P          + A   ++   S   W  LP   L   +++   Q L  RL+ SG
Sbjct: 200 LRAQEPQH--NGYQLLKSAWVNFKGKYSEMKWDSLP---LTYTDTAGYRQLLINRLVQSG 254

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            LD S G S    + ++  ++ FQ    +   G     T++ MN        Q+ +N+ R
Sbjct: 255 HLDTSGGHSSD-TSLLKKGIRAFQKEFNMYEDGQAGKKTIQTMNKTFADWEVQVALNMDR 313

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            +KL    +  RY++VN+P   +E V++G V + S VIVG    +TP+L+SR+   +  P
Sbjct: 314 WRKLP-DTLPQRYIMVNVPGYRMELVDSGTVAVTSKVIVGAPRTRTPLLNSRMTNFVMYP 372

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP--EPPNFIFRQ 300
           YW +P SI  K+M+  +++D  YL   N+ +ID  G  +  + V W+        ++ RQ
Sbjct: 373 YWRVPFSITIKEMLPAIQRDRAYLAKKNLEIIDSHGNAISPDSVKWSKLSKNYFPYVLRQ 432

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
             G  N++   K  F ++   Y+HDT    LF N  R  + GCVRV+    L ++L KD 
Sbjct: 433 MDGIENSLGIMKFNFMNKYAVYLHDTNARGLFANSYRALSHGCVRVQQWDSLSMYLTKDD 492

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
               R  +   +       + +   VP++F Y +A   +D  +   +DIYG D + 
Sbjct: 493 TRHPRDSMRRWLANGDKKQIDIQHSVPIYFRYFTAE-GRDGRLVLHEDIYGEDRIL 547


>gi|300022605|ref|YP_003755216.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524426|gb|ADJ22895.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 597

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 98/402 (24%), Positives = 159/402 (39%), Gaps = 37/402 (9%)

Query: 37  DEIINESYHSIVNDRFDNFLAR--VDMGIDSDIPIISKETIAQTEKAIAFYQ-------- 86
             I  +   S   D           D+ +    P  S +   + +  ++  +        
Sbjct: 145 SYIDRQPSLSSAQDILAKISQSQEPDITLREWQP--SADQFLKLKALLSDLRSKQSGEPQ 202

Query: 87  --DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
              I  RG         L   + S  V  L++R  +      ++G    FDA + +AVK 
Sbjct: 203 DLQIARRG-------SSLQSKSKSPEVATLKKRFGV----ASAQGEETVFDAALVAAVKT 251

Query: 145 FQMRHGLDPSGMVDSSTLEAM----NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           FQ   GL   G V  +T  A+          RI  +  N+   + + ++ +G   V VNI
Sbjct: 252 FQASAGLRADGFVGPATRAALAGGGPENNADRIAAVIANMEEWRWMPQE-LGATNVFVNI 310

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           PA S+   ++G       V+VG  D+QTPI    +  I+  P W +P SI    ++    
Sbjct: 311 PAFSIRLTKDGAPVFEDRVVVGTADKQTPIFSKSMKTIVLRPEWNLPDSIKLTALL---- 366

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
              + ++     ++   G+ +    V+W       +   Q  G  NA+   K  F +++ 
Sbjct: 367 -SGRSVEQQGYVVM-RNGRTIDSTRVNWAKANLREYTIFQPSGDDNALGLVKFLFPNKHA 424

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-KTTP 379
            Y+HDTP   LFN  VR  + GCVRVRN       LL      + + ++ +V+   K   
Sbjct: 425 VYLHDTPSRHLFNERVRLYSHGCVRVRNPQVFAQDLLDIDRGAAAFDVKRLVRKGPKDNN 484

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
           V L T +PVH  Y + W   D   Q+  D YG        + 
Sbjct: 485 VTLETPIPVHVGYFTVWVGDDGQPQYFKDYYGHQKRITLALA 526


>gi|332288328|ref|YP_004419180.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
 gi|330431224|gb|AEC16283.1| L,D-transpeptidase catalytic domain protein [Gallibacterium anatis
           UMN179]
          Length = 469

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 93/305 (30%), Positives = 151/305 (49%), Gaps = 12/305 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLF-QMRHGLDPSGMVDSSTLEAMNVPVDL-- 171
           R R  +  D   +  L       + + V  F Q+ H    +     + L  +        
Sbjct: 155 RYRAQLPSDEVINAWLDAVSQQQLAAFVAKFDQVNHRYAQTK---KAILSELTKSTADSN 211

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            + +L +NL R++ + + + G   + VNIP   L    NG+  L S VIVG+  R+TP++
Sbjct: 212 VLAKLAINLQRLRFIPDFETG---IFVNIPTFQLHYYRNGEEILSSRVIVGKKARKTPVM 268

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            S+++ I+ NP W  P  +I +D++  +R+DP Y+  N   +ID KG  +    +DW + 
Sbjct: 269 MSKLSNIVVNPPWNAPVRLINEDLIPKVRKDPSYIYRNGYTIIDSKGNTIDPYTIDWENM 328

Query: 292 EP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                 +  RQ PG  +A+ + K    S++  Y+HDTP   LFNN  R  +SGC+RV   
Sbjct: 329 TAKRFPYRLRQAPGGDSALGNFKFNMPSKDAIYLHDTPNHRLFNNKNRAISSGCIRVNKS 388

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L   LL +   WS     +V+K+RKTT V + +  PV+  Y++AW+     +    DI
Sbjct: 389 DELATLLLTEA-GWSVDKKAQVLKSRKTTSVPIQSTNPVYLYYVTAWADAQGKVHTVADI 447

Query: 410 YGLDN 414
           YG D 
Sbjct: 448 YGYDQ 452


>gi|332188328|ref|ZP_08390054.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
 gi|332011641|gb|EGI53720.1| putative peptidoglycan binding domain protein [Sphingomonas sp.
           S17]
          Length = 428

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 103/410 (25%), Positives = 167/410 (40%), Gaps = 37/410 (9%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLA----RVDMGIDSDIPIISKETI 75
           L    +L       + L +I        V+ R     A    ++D  ++S  P    E  
Sbjct: 34  LAYAGTLARGAADPTKLFDIYTVPR-PQVDLRAGLARAMQEGKLDEWLESLAP--GDENY 90

Query: 76  AQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            +  +A    +   +    P +P   +P+  G S   +  +  +L+    LD +      
Sbjct: 91  RRLSQAYVALRKSSNAPPTP-IPDAGKPIEPGKSDPRIPAIAAQLVAFDYLDKAAA-GAV 148

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           +   + +AVK  Q  +G+DP GM+ +  LE +N+    R R + VN+ R++ L E+    
Sbjct: 149 YTPPMVAAVKRMQADYGIDPDGMIGTDALEILNLSDADRARAIAVNMERLRWL-ERNPPA 207

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             + VN+ AA L    +GK+     V+VG  +  TP L S I R++ NP W +PRSI +K
Sbjct: 208 TRIDVNLAAARLAYWRDGKLVDTRKVVVGEPETATPQLGSPILRLVANPTWTVPRSIQRK 267

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           ++         YL+ NN+   D                        Q PG  NA+   K 
Sbjct: 268 ELAGKGA---GYLRRNNMVWKDGW--------------------IVQQPGPKNALGLVKF 304

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
           +  +  + Y+HDTP   LF+ V R  + GCVRV + +     L +D              
Sbjct: 305 DMQNEQSIYLHDTPAKALFSEVQRQRSHGCVRVEDALGFAEMLARDQ-GVDAEW-HRARA 362

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPLP 423
           T K + V L   VPV  +Y +           R D YG ++     +  P
Sbjct: 363 TGKESYVALPQPVPVRMLYQTVLFDDSGEPVVRSDPYGWNDRVASALGFP 412


>gi|116750212|ref|YP_846899.1| peptidoglycan binding domain-containing protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699276|gb|ABK18464.1| Peptidoglycan-binding domain 1 protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 587

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/409 (23%), Positives = 160/409 (39%), Gaps = 40/409 (9%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVN-----DRFDNFLARVD--MGIDSDIPIISKETIAQ 77
           +L    + A V    +   +   ++     D+      R+     +    P         
Sbjct: 189 NLFRVAVEADVKLAELLVRFSGQMDPFSGEDQVKALSGRIPMSDYLKRLEPRSP--HYRP 246

Query: 78  TEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
              A+A Y+D+ +     ++     +  G S  +V+ L++RL           ++  FDA
Sbjct: 247 LLNALARYRDLAANTTQQQVRAPSTMRPGESGNAVRDLQKRLRQEDFY--RGEITGTFDA 304

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
             + AVK FQ  H ++P G V   T E +N+P   +   +   +  ++   + +   RYV
Sbjct: 305 ATQQAVKRFQAAHQIEPDGAVGQRTREWLNMPFKQKAEMIAHGINLLR-QSQTRRSDRYV 363

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVD-------------RQTPILHSRINRIMFNPY 243
            +NIP  +LE  ++G+      VIVG+                QTP L S I +++ NP 
Sbjct: 364 RINIPQFALEYYKDGQSLSSHRVIVGKASGKKVKVLGKWMRENQTPTLTSNIEQVIINPR 423

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +   I + ++ A    DPQY   +    +             W           Q PG
Sbjct: 424 WYVSDRI-RLELDAQAGSDPQYFARHGYVQMA--------SLYPW-----GQPRLFQKPG 469

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N +   K EF +    Y+HDT +  LF    R  + GC+RV     L   LLKD    
Sbjct: 470 PKNPLGQIKFEFPNPYAVYLHDTNQKSLFQRTRRDFSHGCIRVEKAKHLAHLLLKDDQNP 529

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
                E  + + +   +KLAT VP+   Y+     +D  + F  D YG 
Sbjct: 530 LADKTEPYLSSDRQLFIKLATPVPIIIEYLPVSCNEDGQVIFFGDPYGW 578


>gi|327405461|ref|YP_004346299.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
 gi|327320969|gb|AEA45461.1| ErfK/YbiS/YcfS/YnhG family protein [Fluviicola taffensis DSM 16823]
          Length = 535

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 96/407 (23%), Positives = 171/407 (42%), Gaps = 40/407 (9%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---- 101
            +   + D  +  +D  I++  PI+S   +    K++A    +   G W           
Sbjct: 130 RLAQLQQDLKVGFLDTSINNYRPIVS-IDVKSLSKSVAQMDTVKKWGTWLANMGPKRREY 188

Query: 102 --LHLG-----------NSSVSVQRL-----------RERLIISGDLDPSKGLSVAFDAY 137
             L +G           N    +  L           +E LI  G LDP K    +F   
Sbjct: 189 RYLAIGLYQFASKKTLSNIHFEIPALVEDSLRCVELSKESLIDKGYLDPKKNDDESF--- 245

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
              A+  FQ  +GL   G++   T +++N  V  +  +  +++ R +         RY+ 
Sbjct: 246 -WDAMSRFQADNGLKADGVIGIYTRKSLNESVRFKCHRAILSMERWRW--RAPFPDRYLW 302

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP   L    N  +     V+VG+ + QTP L S++  I+  PYW  P +I  K+ + 
Sbjct: 303 VNIPEYKLRLFYNDSLLSEHRVVVGKPENQTPELSSKLRAIISLPYWTQPHTIASKEFLP 362

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEF 315
            ++ +  Y   NN  +   +  EV    ++W   +  NF FR  Q+PG  NA+   K EF
Sbjct: 363 AIQNNSNYAAKNNYKVYRGE-TEVDPTTINWKRYKEKNFPFRVRQEPGSDNALGLVKFEF 421

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL--KDTPTWSRYHIEEVVK 373
            ++   Y+HDTP    FN  +R  + GC+R      L  ++L   D    +R  ++ ++ 
Sbjct: 422 NNKFGVYIHDTPSKGFFNKDIRAYSHGCMRCELPDSLARFILTRDDRQKMTRDSLDTLIA 481

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            ++   + L   + +   YI+  +     + F  D+Y  D  ++ ++
Sbjct: 482 RKEHFTIHLHKPIQLQVDYITVTTNGKGRLLFYPDVYDRDEKYLKMM 528


>gi|256820616|ref|YP_003141895.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
 gi|256582199|gb|ACU93334.1| ErfK/YbiS/YcfS/YnhG family protein [Capnocytophaga ochracea DSM
           7271]
          Length = 571

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 97/392 (24%), Positives = 172/392 (43%), Gaps = 22/392 (5%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           +D +++   +  +  +  +   + +            + I    + +   + I       
Sbjct: 186 IDMLLHLGDNDDLEAKLASLYPKGEQYRRMKY-----KYIQLKNQPLDTIRIIKFSDP-- 238

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               +    G +   V+ LR  L   G     K      D+ +  A+K FQ  +GL P G
Sbjct: 239 ----KNFVYGYTDPEVESLRNALAKKGFGSVPKIDPQEVDSTLIWALKRFQRSNGLIPDG 294

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
            +   TL  +N+    +   L++N+ R++      +G  Y++VNIP   L       +  
Sbjct: 295 SLGIQTLNRLNMNKARQRDLLRLNMERMRVFNN-DLGDDYIIVNIPDYKLFLYHKDSLIY 353

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHM 273
           ++ V+VGR    TPI    I  I F P W +P+SII+K+M+  +  ++DP+  K+    M
Sbjct: 354 QTKVVVGRAQSSTPIFTDSIRSIEFRPTWSVPQSIIRKEMIPQMLLQEDPERYKNRGYTM 413

Query: 274 IDEKGKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +  GK +   EVDW +       F F + P + N++   K    +  + Y+HDTP   L
Sbjct: 414 YE-NGKVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYL 472

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDT---PTWSRYHIEEVVKTRKTT--PVKLATEV 386
           F    R  + GCVRV+N   L  +LLK+     +W+   +++ +   K     VKL T+ 
Sbjct: 473 FEREQRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKY 532

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            ++ +Y +    K      ++DIY LDN  + 
Sbjct: 533 MINILYYTISVDKKGEATIKNDIYDLDNEQLK 564


>gi|315223727|ref|ZP_07865577.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
 gi|314946302|gb|EFS98301.1| peptidoglycan binding domain protein [Capnocytophaga ochracea
           F0287]
          Length = 571

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 94/392 (23%), Positives = 172/392 (43%), Gaps = 22/392 (5%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP 95
           +D +++   +  +  +  +   + +            + I    + +   + I       
Sbjct: 186 IDMLLHLGDNDDLEAKLASLYPKGEQYRRMKY-----KYIQLKNQPLDTIRIIKFSDP-- 238

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               +    G +   V+ LR  L   G     +      D+ +  A+K FQ  +GL P G
Sbjct: 239 ----KNFVYGYTDPEVESLRNALAKKGFRSVPEIDPQEVDSTLIWALKRFQRSNGLIPDG 294

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
            +   TL  +N+    +   L++N+ R++      +G  Y++VNIP   L       +  
Sbjct: 295 SLGIQTLNRLNMNKARQRDLLRLNMERMRVFNN-DLGDDYIIVNIPDYKLFLYHKDSLIY 353

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHM 273
           ++ V+VGR    TPI    I  + F P W +P+SII+K+M+  +  ++DP+  K+    M
Sbjct: 354 QTKVVVGRAQTSTPIFTDSIRSVEFRPTWSVPQSIIKKEMIPQMLLQEDPEKYKNRGYTM 413

Query: 274 IDEKGKEVFVEEVDWNS--PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
            +  G+ +   EVDW +       F F + P + N++   K    +  + Y+HDTP   L
Sbjct: 414 YE-NGRVIDPLEVDWTNPLVHKRAFYFVEAPSERNSLGLVKFLLNNNMSIYLHDTPSKYL 472

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDT---PTWSRYHIEEVVKTRKTT--PVKLATEV 386
           F    R  + GCVRV+N   L  +LLK+     +W+   +++ +   K     VKL T+ 
Sbjct: 473 FEREQRALSHGCVRVQNPSQLAYYLLKNEGDGKSWTEEKVKDFMNNNKRNQYRVKLNTKY 532

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVG 418
            ++ +Y +    K      ++DIY LDN  + 
Sbjct: 533 MINILYYTISVDKKGEATIKNDIYDLDNEQLK 564


>gi|170741335|ref|YP_001769990.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168195609|gb|ACA17556.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 654

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 91/341 (26%), Positives = 151/341 (44%), Gaps = 33/341 (9%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            LP  P L  G     V  +R R  +      S   + A+DA V  A++ FQ   GL  +
Sbjct: 260 RLPKGPVLKPGMRDARVPLIRARFGL-----GSADDATAYDAAVAGAIERFQRERGLAAT 314

Query: 155 GMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           G++D  T+ A+  P    +   L  N+ R + L  + +G +YV VNIP   +  +E G+V
Sbjct: 315 GILDPRTVAALAGPSPGRQEADLLANMERWRWLPAE-LGRKYVWVNIPDLKVRVMEGGRV 373

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
              + VIVG+ D  TPI    ++  + NP W +P SI++ + +  L +DP Y       +
Sbjct: 374 VDEARVIVGKPDSPTPIFSGEMSYAVVNPSWNVPPSILKNEFLPRLARDPSYAARLGYQV 433

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
           + +                      RQ PG+ NA+   K  F + +  Y+HDTP   LF 
Sbjct: 434 VRKGNSI----------------AVRQPPGERNALGFIKFMFPNEHAVYLHDTPNRTLFA 477

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
              R  + GCVRV +       +L   PTW    +++++       V L  ++PVH  Y 
Sbjct: 478 RGARALSHGCVRVDDPFRFAEVVLG--PTWPTERLKKLIGKG-ERTVMLPEKLPVHLAYF 534

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPL------PEDHPI 428
           +  + +   ++  +D+YG++      + L      P    +
Sbjct: 535 TLVADEAGGLREAEDLYGINARVKVALGLSNEALPPSPEAL 575


>gi|170749212|ref|YP_001755472.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655734|gb|ACB24789.1| peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 674

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 96/410 (23%), Positives = 158/410 (38%), Gaps = 40/410 (9%)

Query: 22  MGLSLVEKPIHASVLDEIINE----SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
                    I+ + +  +I         + V  + D   A+    + +  P         
Sbjct: 191 YARDARGGRINLASISRLITPHLDLPAGNDVLAKLDEAGAKAGEALQAYNPATP--GYLA 248

Query: 78  TEKAIAFYQDILSRGGWP-ELPIRP-LHLGNSSVSVQRLRERLIISGD----LDPSKGLS 131
            +  +A  +        P  LP  P L +G     V  LR    +       LD   G  
Sbjct: 249 LKARLAALRGPAPTAVKPLRLPAGPVLRVGMRDARVPLLRAHFNLENRPAATLDKGPGEP 308

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-----NVPVDLRIRQLQVNLMRIKKL 186
             +D+ V  AV  FQ   GL  +G ++  T+ A+              +L VN+ R + L
Sbjct: 309 EEYDSGVADAVAKFQRGRGLPGNGTLNVQTVLALADAGRTARPTGGEAELIVNMERWRWL 368

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +G  Y+LVN+P   L A   G +   + VIVG+ + +TP+    +   + NP W +
Sbjct: 369 P-GDLGSDYILVNVPEYRLRAYRGGVMRDEARVIVGKPESRTPLFSGMMEYAVVNPSWYV 427

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI+ K M   L             ++   G                    RQ PG+ N
Sbjct: 428 PPSIL-KTMAPKLAGYGGK-TWGGYEVVRRGGHI----------------SLRQPPGERN 469

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           A+   K  F +++  Y+HDTP   LF+   R  + GCVRV +   L   +L   P WS  
Sbjct: 470 ALGFIKFMFPNQHAVYLHDTPNRSLFSASKRDFSHGCVRVDDPFRLADVVL---PNWSED 526

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
            +++++       ++L  ++PVH  Y +A+       +   D+YG D   
Sbjct: 527 RLKKLIGKG-ERTIRLPEKLPVHLAYFTAFVDDGGTYRTLPDLYGYDAPM 575


>gi|121591699|ref|ZP_01678927.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|153819645|ref|ZP_01972312.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
 gi|121546440|gb|EAX56672.1| putative peptidoglycan binding domain protein [Vibrio cholerae
           2740-80]
 gi|126509804|gb|EAZ72398.1| putative peptidoglycan binding domain protein [Vibrio cholerae NCTC
           8457]
          Length = 459

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 82/334 (24%), Positives = 155/334 (46%), Gaps = 15/334 (4%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET--IAQTEKAIAFYQDILSR 91
             LD+ +          +    +A  +  +   +   + +     Q  +A      I   
Sbjct: 132 GQLDQPLAPPSE---EAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFN 188

Query: 92  GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLFQMR 148
                  +  L   G+     + L +RL +   LD +  L+    +DA +E  +K FQ  
Sbjct: 189 EVALYEQMERLKRPGDPLSHREALVQRLALVN-LDTTSILNDVAYYDASLEKPIKQFQKM 247

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           HGL   G++   T++ +N  V  R+  L +N  RI+    Q+     ++VN+P   ++  
Sbjct: 248 HGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYW 305

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+    S V+VG+  R TP+++++++ ++ NP W +P  I+ +D++ ++++D +YL +
Sbjct: 306 DAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLAN 365

Query: 269 NNIHMIDEKG--KEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +++ +I      + +    +DW + EP    +  RQ  G  NA+ + K    +    Y+H
Sbjct: 366 HHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           DTP   LFNN  R  +SGC+RV N       LL 
Sbjct: 426 DTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLA 459


>gi|42524313|ref|NP_969693.1| putative amidase [Bdellovibrio bacteriovorus HD100]
 gi|39576522|emb|CAE80686.1| putative amidase [Bdellovibrio bacteriovorus HD100]
          Length = 510

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 92/430 (21%), Positives = 176/430 (40%), Gaps = 31/430 (7%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHS-IVNDRFDNFLARVDMGIDSDIPIISKET--I 75
            L M   L    +        +       +   +F            S + +++ +    
Sbjct: 82  FLRMLRDLQIGSVDPVNAGRDVKLVRRDFLTPKQFQMIALAAGNNAQSFVDLVAPQNAPY 141

Query: 76  AQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
              + AI         G W ++     PL L +    ++ ++ RL + G    +  +   
Sbjct: 142 IGVQAAIQKIYPHCIDGTWQDIVPVTTPLRLYSIHPVIREIKSRLALLGYTMRN--MDDR 199

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSS--TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           FD  +  AV   Q    + P G +         ++V    R+RQ+QV++ +++    Q  
Sbjct: 200 FDGDLLKAVTDIQWNMRIRPDGEISPKGKVWSFLSVSCMDRVRQIQVDMEKMRWFP-QYF 258

Query: 192 GLRYVLVNIPAASLEAVENGKVG---LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
             +Y+ VN+  +    ++        +    I GR  R++P +   I  ++ NP+WV+P 
Sbjct: 259 EKKYIFVNLAMSYFIMMDQSTDWPRVMSFRTINGRPARKSPTMRDEIVNVIINPFWVVPP 318

Query: 249 SIIQKDMMALLR-----QDPQYLKDNNIHMIDEKGK-EVFVEEVDWNSPEPP----NFIF 298
           +I  +D +  L+     Q  +Y   ++        + +V    +DW          + I 
Sbjct: 319 TIFYEDKVNDLKDLTSEQIREYFDSHHYEAWVGGFRRKVDPTTIDWKGIAAGTVDPDIII 378

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           RQ P   NA+   K +  +    Y+HDT +  LF+  +R  +SGCVR+   +DL  +LL+
Sbjct: 379 RQLPHLGNALGVLKFDLTNSFAIYLHDTNQRELFDTPMRQLSSGCVRLEKPLDLAEYLLE 438

Query: 359 DTPTWSRYHIEEVVKTR-----KTTPVKLA--TEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           DTP W R  I  ++        K T + +     +PV+  Y+++    D +++F DDIYG
Sbjct: 439 DTP-WDRQTIASMMARPGEVVAKPTEIPVPSYKRMPVYTAYLTSMMNSDEVVRFVDDIYG 497

Query: 412 LDNVHVGIIP 421
            +   +  + 
Sbjct: 498 QNPAVLRHLD 507


>gi|332885569|gb|EGK05815.1| hypothetical protein HMPREF9456_02079 [Dysgonomonas mossii DSM
           22836]
          Length = 592

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 94/444 (21%), Positives = 186/444 (41%), Gaps = 32/444 (7%)

Query: 5   LKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID 64
           L++   L        +  G  +  K ++    D  I     +   + +          I 
Sbjct: 140 LELTSSLSAVKYIKGMKYGF-INPKKLYKKDYDISILTPDSTFYQEIYKELKEDPISSII 198

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           + +P        + +K     ++   +G           LG+ +  +  + +RL ++G+ 
Sbjct: 199 NSVPT--DAIYLRLQKEYQELKEKKEQGFKTITSTATYKLGDKNKHISEIAQRLALTGEY 256

Query: 125 DPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
             ++  S+         D  +  A+ +F+ ++       +   T++A+N P+D  + +LQ
Sbjct: 257 VIAESDSIRDDSSEMMLDENLLEAINIFRKKNSYPEEKEIGKLTIDALNRPLDYYLEKLQ 316

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            N+ R +  + +    +++ VN+ +A L A E   + L   V VG    +TP+L S I+ 
Sbjct: 317 ANMERYRWKMTKAKHNKHIEVNVASAYLTATEQDSLPLIMKVCVGTATNKTPLLQSDISY 376

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PN 295
           +  NP W IP SI QK++  L ++DP Y+K +N+ +    GKEV +  ++W   +P   +
Sbjct: 377 LNLNPIWNIPTSIAQKEVAVLQKKDPTYIKRHNMKLY-RNGKEVDITTINWKEVDPSKFS 435

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +  RQ PG+ NA+   K  F +  + Y+HDTP    F    R  + GCVRV+   DL  +
Sbjct: 436 YTIRQSPGESNALGLVKFMFSNAFSVYLHDTPSKAAFGRKNRAVSHGCVRVQKPFDLAFF 495

Query: 356 LLKDTPTW-------------SRYHIEEVVKTRKTTP-----VKLATEVPVHFVYISAWS 397
            +  T                      + +            +    ++ +   Y + + 
Sbjct: 496 CMSTTSDDIYKDRLFYSIDKQPISKAGKKLAQENKLKKLPDILNPKEKISLFIDYYTVYM 555

Query: 398 -PKDSIIQFRDDIYGLDNVHVGII 420
            P D ++ + DD+Y  D+  +  +
Sbjct: 556 YPDDDMLYYADDVYEYDSAILNAL 579


>gi|46202872|ref|ZP_00052464.2| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 265

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 98/248 (39%), Positives = 154/248 (62%), Gaps = 4/248 (1%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           ++R++      +G R+V+ NIPAA ++ VENG+V       VG++DRQ+PI++++  +I 
Sbjct: 1   MIRLRSY-SGDLGRRFVITNIPAALVQTVENGQVVTLHAAGVGKIDRQSPIMNTKATQIN 59

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
           FNP W +P SI++KD++  +++DP YL DN I ++   G+E+  + V+W S E   + +R
Sbjct: 60  FNPTWTVPASIVKKDLIPKMQKDPNYLTDNKIRILSG-GQEISPKSVNWFSDEGTRYTYR 118

Query: 300 QDPGKI-NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           QD G   N+M   +I   +    +MHDT    +F +  RF +SGCVRV+N+ +   WLLK
Sbjct: 119 QDSGADFNSMGVVRINIPNPYGVFMHDTNSRGVFGDDFRFISSGCVRVQNVREYITWLLK 178

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHV- 417
           DTP W R H+E+ V++ +     L+  VPV++ YI+AW+  D  +QFRDDIY  D V+V 
Sbjct: 179 DTPGWDRAHVEQAVESGQRIDATLSQPVPVYWTYITAWATPDGTVQFRDDIYKRDGVNVP 238

Query: 418 GIIPLPED 425
             I  P  
Sbjct: 239 STIEAPTP 246


>gi|315633943|ref|ZP_07889232.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
 gi|315477193|gb|EFU67936.1| conserved hypothetical protein [Aggregatibacter segnis ATCC 33393]
          Length = 487

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 81/244 (33%), Positives = 130/244 (53%), Gaps = 7/244 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L +N  R++ L   + G   + VNIP+  L    +G+V L S VIVG+  R+TP++ 
Sbjct: 231 LHRLAINAQRLRILPVFQDG---IFVNIPSYELNYYRDGQVILSSRVIVGQSSRKTPVMS 287

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           SR++ ++ NP W  P  +I +D++  +R+DP Y+  +   +ID  G  +    +DW +  
Sbjct: 288 SRLSNVVVNPPWNAPTRLINEDIIPKVRKDPSYIYRHGYTIIDGSGNTIDPYTIDWENMS 347

Query: 293 P--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  RQ P   +A+ + K    S    Y+HDTP+  LF N  R  +SGCVRV    
Sbjct: 348 AKRFPYRLRQAPSDNSALGNYKFNMPSSEAIYLHDTPKRNLFGNKNRALSSGCVRVEKSD 407

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
            L   LLK+   W+    + V+K++KTT   + ++ PV   Y++AW  KD  +    DIY
Sbjct: 408 QLATILLKEA-GWTDETKQNVLKSKKTTSAGIKSDNPVFLYYVTAWVDKD-QVHTLPDIY 465

Query: 411 GLDN 414
           G D 
Sbjct: 466 GYDK 469


>gi|52424877|ref|YP_088014.1| hypothetical protein MS0822 [Mannheimia succiniciproducens MBEL55E]
 gi|52306929|gb|AAU37429.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 486

 Score =  266 bits (681), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 85/307 (27%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKL---FQMRHGLDPSGMVDSSTLEAMNVP--------VD 170
           G      G +        SAVK    F   + L  +  +   T++ +             
Sbjct: 173 GYKPAKPGETDV--EEWLSAVKNGQNFAYVNSLTTNNSIYQQTIDKIGSSDFDDDKSVNS 230

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
             + +L +N  R++ +     G   + VNIP+  L    + ++ L S VIVG+ +R+TP+
Sbjct: 231 AILYKLALNAQRLRVIPNFSNG---IFVNIPSYQLNYYRDNQLILNSRVIVGKKERRTPV 287

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
           ++S+++ ++ NP W  P  +I +D++  ++++P YL  +   ++D KG +V    ++W +
Sbjct: 288 MYSKLSNVVVNPPWNAPTRLINEDIVPKIKKNPGYLSAHGYSILDSKGNKVNPNSINWAA 347

Query: 291 P-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                 +  RQD G  +A+   K    S +  Y+HDTP   LFN   R  +SGCVRV   
Sbjct: 348 IGSKFPYRIRQDAGDNSALGRFKFNMPSSDAIYLHDTPNHNLFNKQDRALSSGCVRVEKS 407

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
             L   LLK+   WS    + V+ ++KTT   + ++ PV+  Y++AW  ++  +    DI
Sbjct: 408 NQLASILLKEA-GWSEDKKQRVLNSKKTTSAPIYSDNPVYLYYVTAWV-ENGQVNTLPDI 465

Query: 410 YGLDNVH 416
           YG D V 
Sbjct: 466 YGYDIVQ 472


>gi|261868418|ref|YP_003256340.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413750|gb|ACX83121.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 502

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 22/290 (7%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            G +  F   +   V        L  +G +D + +          + +L +N  R++ L 
Sbjct: 216 SGENPLFKQTLAKVV-------NLILNGKLDKNGINE--------LHRLAINAQRLRILP 260

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           E   G   + VNIP+  L    +GK+ L S VIVG   R+TP++ SR++ ++ NP W  P
Sbjct: 261 EFDNG---IFVNIPSYQLNYYRDGKLVLNSRVIVGTDKRKTPVMFSRLSNVVVNPPWNAP 317

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKI 305
             +I +D++  +R+DP Y+  N   +ID KG  +    +DW +       +  RQ P   
Sbjct: 318 TRLINEDIIPKVRRDPSYIYRNGYTIIDGKGNTIDPYTIDWENMTAKKFPYRLRQVPSDN 377

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           +A+ + K    S +  Y+HDTP+  LF N  R  +SGCVRV    +L   LLK+   W+ 
Sbjct: 378 SALGNYKFNMPSSDAIYLHDTPKRSLFGNKRRDLSSGCVRVEKSEELATVLLKEA-GWTA 436

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
              + V+K+RKTT V + +  PV   Y++AW  K+  +    D+YG D  
Sbjct: 437 ERKQSVLKSRKTTSVTVKSNNPVFLYYVTAWVDKE-QVHTLPDVYGYDKA 485


>gi|251792219|ref|YP_003006940.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533607|gb|ACS96853.1| periplasmic protein [Aggregatibacter aphrophilus NJ8700]
          Length = 506

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 86/276 (31%), Positives = 138/276 (50%), Gaps = 15/276 (5%)

Query: 150 GLDPSGMVDSSTLEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
            L     +   TL+ +        +      + +L +N  R++ L   + G   + VNIP
Sbjct: 220 NLSSDNPLFKQTLDKVKALIVKGVDKNKTTELYRLAINAQRLRILPTFQNG---IFVNIP 276

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           +  L    +G+  L S VIVG+ +R+TP++ SR++ ++ NP W  P  +I +D++  +R+
Sbjct: 277 SYQLTYYRDGEAVLNSRVIVGKTERKTPVMFSRLSNVVVNPSWNAPTRLINEDIIPKVRK 336

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRN 319
           DP Y+  N   +ID  G  +    +DW +       +  RQ P   +A+ + K    S +
Sbjct: 337 DPSYIYRNGYTIIDGNGNTIDPYTIDWENMTAKKFPYRLRQAPSDNSALGNYKFNMPSSD 396

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             Y+HDTP+  LF N  R  +SGCVRV     L   LLK+   WS    + V+K+RKTT 
Sbjct: 397 AIYLHDTPKRSLFGNKKRDLSSGCVRVEKSDQLATILLKEA-GWSDERKQNVLKSRKTTS 455

Query: 380 VKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
             + ++ PV   Y++AW  KD  +    DIYG D  
Sbjct: 456 ASIKSDNPVFLYYVTAWVDKD-QVHTLPDIYGYDKA 490


>gi|261493954|ref|ZP_05990462.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
 gi|261310386|gb|EEY11581.1| hypothetical protein COK_2352 [Mannheimia haemolytica serotype A2
           str. BOVINE]
          Length = 518

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 8/260 (3%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +  E           +L +N  R++ +     G   + VNIP+  L    +G + L+S
Sbjct: 248 GKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQS 304

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVGR DR+TP++ S+++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  
Sbjct: 305 KVIVGREDRRTPVMDSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSS 364

Query: 278 GKEVFVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           G ++    V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP   LF  
Sbjct: 365 GNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGK 424

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGCVRV    +L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++
Sbjct: 425 TGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVT 483

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AW  +   +Q   DIY  D 
Sbjct: 484 AWV-EGGKVQTLPDIYNFDA 502


>gi|261494761|ref|ZP_05991240.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
 gi|261309578|gb|EEY10802.1| hypothetical protein COI_0554 [Mannheimia haemolytica serotype A2
           str. OVINE]
          Length = 510

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 8/260 (3%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +  E           +L +N  R++ +     G   + VNIP+  L    +G + L+S
Sbjct: 240 GKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQS 296

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVGR DR+TP++ S+++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  
Sbjct: 297 KVIVGREDRRTPVMDSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSS 356

Query: 278 GKEVFVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           G ++    V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP   LF  
Sbjct: 357 GNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGK 416

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGCVRV    +L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++
Sbjct: 417 TGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVT 475

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AW  +   +Q   DIY  D 
Sbjct: 476 AWV-EGGKVQTLPDIYNFDA 494


>gi|296531943|ref|ZP_06894738.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
 gi|296267730|gb|EFH13560.1| peptidoglycan-binding domain 1 protein [Roseomonas cervicalis ATCC
           49957]
          Length = 321

 Score =  264 bits (674), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 8/319 (2%)

Query: 110 SVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V  LR RL        +       +DA +E+AV+ +Q  H L+  G V   T   MN P
Sbjct: 3   RVPALRARLAAEDAELAAAPDGGALYDAPLEAAVRRWQAAHSLEVDGRVGPMTQRLMNRP 62

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               + Q++V + + +       G R + VNIP   L  ++  +      V+VG+V R T
Sbjct: 63  AGAVVGQIRVAMDQRRGRGAAAPGRR-IEVNIPEFRLRVMDGARQVTAMNVVVGKVARAT 121

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEE 285
           P L  R+  + FNP W +P    ++D++   R+DP+ + +    +    G E   V    
Sbjct: 122 PPLAVRMTAVQFNPPWGVPERNAREDLLPKFRRDPRAMMEKGFRLFTVVGGERVEVDPMT 181

Query: 286 VDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           VDW S  P    +I RQD   ++A+   K    + ++ Y+HDTP+  LF    R  +SGC
Sbjct: 182 VDWASVNPQRFPYIVRQDASDVSALGRLKFVMPNGDDIYLHDTPDRHLFGRADRALSSGC 241

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           +R+   ++L   +L+  P W+R   +  + +R+T+ + L    PV   Y +    +    
Sbjct: 242 IRLSQPMELLDLVLEGVPGWNRERAQRALDSRQTSFLSLPRAWPVRLHYDTVVV-EQGQA 300

Query: 404 QFRDDIYGLDNVHVGIIPL 422
           +   DIYGLD  ++ ++  
Sbjct: 301 RLLSDIYGLDAAYLRLLDQ 319


>gi|254363167|ref|ZP_04979216.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
 gi|110735335|gb|ABG89238.1| periplasmic protein precursor [Mannheimia haemolytica]
 gi|153095061|gb|EDN75612.1| hypothetical protein MHA_2750 [Mannheimia haemolytica PHL213]
          Length = 510

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 8/260 (3%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +  E           +L +N  R++ +     G   + VNIP+  L    +G + L+S
Sbjct: 240 GKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGNLALQS 296

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            VIVGR DR+TP+++S+++ ++ NP W +P SI+ KD++  L +DP Y    +  ++D  
Sbjct: 297 KVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPGYADRASFEILDSS 356

Query: 278 GKEVFVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           G ++    V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP   LF  
Sbjct: 357 GNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFGK 416

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGCVRV    +L   LLK+   W      +V+ ++KTT  ++ ++ PV+  Y++
Sbjct: 417 TGRALSSGCVRVEKSDELATILLKEA-GWGSDKKNQVLGSKKTTSAQIRSDNPVYLYYVT 475

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
           AW  +   +Q   DIY  D 
Sbjct: 476 AWV-EGGKVQTLPDIYNFDA 494


>gi|166012265|ref|ZP_02233163.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
 gi|165988829|gb|EDR41130.1| YcbB [Yersinia pestis biovar Antiqua str. E1979001]
          Length = 252

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 8/239 (3%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++ L         ++VNIP  SL   ++G   L S VIVGR  R+TP++ S +N ++ N
Sbjct: 1   RLRILPGHV--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTPLMSSALNNVVVN 58

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVDWN--SPEPPNF 296
           P W +P S++++D++   R D  Y + N   ++         +    +DW+  SP    +
Sbjct: 59  PPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMIDWSIISPNNFPY 118

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVRV    DL   L
Sbjct: 119 RLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNKASDLANML 178

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L+D   W+   +   VK   TT V +   VPV   Y++AW  +D   QFR DIY  D +
Sbjct: 179 LQDA-GWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQFRTDIYNYDKM 236


>gi|293392039|ref|ZP_06636373.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952573|gb|EFE02692.1| periplasmic protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 502

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 15/268 (5%)

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
            L  +G +D + +          + +L +N  R++ L E   G   + VNIP+  L    
Sbjct: 231 NLILNGKLDKNGINE--------LYRLAINAQRLRILPEFANG---IFVNIPSYQLNYYR 279

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +GK+ L S VIVG   R+TP++ SR++ ++ NP W  P  +I +D++  +R+DP Y+  N
Sbjct: 280 DGKLVLNSRVIVGTDKRKTPVMFSRLSNVVVNPPWNAPTRLINEDIIPKVRRDPSYIYRN 339

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTP 327
              +ID KG  +    +DW +     F +  RQ P   +A+ + K    S +  Y+HDTP
Sbjct: 340 GYTIIDGKGNTIDPYTIDWENMTAKKFPYRLRQVPSDNSALGNYKFNMPSSDAIYLHDTP 399

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
           +  LF N  R  +SGCVRV    +L   LLK+   W+    + V+K+RKTT V + +  P
Sbjct: 400 KRSLFGNKRRDLSSGCVRVEKSEELATVLLKEA-GWTAERKQSVLKSRKTTSVTVKSNNP 458

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           V   Y++AW  K+  +    D+YG D  
Sbjct: 459 VFLYYVTAWVDKE-QVHTLPDVYGYDKA 485


>gi|260914201|ref|ZP_05920674.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631834|gb|EEX50012.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 511

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 136/260 (52%), Gaps = 8/260 (3%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           + +   E  +     ++ ++ +N  R++ + E   G   + VNIP+  LE   +G++ L 
Sbjct: 241 LTALVKEDADKTALSKMYKMAINAQRLRVIPEFTDG---LFVNIPSYQLEYYRDGQLVLT 297

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           S VIVG+  R+TP+++S+++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID 
Sbjct: 298 SRVIVGKKARKTPVMYSKLSNVVVNPPWNAPVRLINEDIIPKVRKDPSYIYRNGYTIIDG 357

Query: 277 KGKEVFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
           KG  V    +DW +       +  RQ PG  +A+ + K    S +  Y+HDTP   LF  
Sbjct: 358 KGNSVDPYTIDWENMTAKKFPYRLRQAPG-DSALGNFKFNMPSSDAIYLHDTPNRGLFGK 416

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
             R  +SGCVRV     L   LLK+   WS      V+++RKTT   +A++ PV   Y++
Sbjct: 417 KDRALSSGCVRVEKSDQLATILLKEA-GWSEERKRSVLQSRKTTSANVASDNPVFLYYVT 475

Query: 395 AWSPKDSIIQFRDDIYGLDN 414
            W  K        DIYG D+
Sbjct: 476 MWVNK-GQTHTLPDIYGYDS 494


>gi|307244929|ref|ZP_07527026.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253883|ref|ZP_07535735.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258337|ref|ZP_07540078.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854094|gb|EFM86302.1| hypothetical protein appser1_1410 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863087|gb|EFM95029.1| hypothetical protein appser9_1410 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867521|gb|EFM99368.1| hypothetical protein appser11_1400 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 521

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|303251945|ref|ZP_07338116.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247104|ref|ZP_07529156.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307256146|ref|ZP_07537933.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307262708|ref|ZP_07544336.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|302649375|gb|EFL79560.1| hypothetical protein APP2_0272 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856353|gb|EFM88504.1| hypothetical protein appser2_1030 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306865327|gb|EFM97223.1| hypothetical protein appser10_1510 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306871963|gb|EFN03679.1| hypothetical protein appser13_1350 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 521

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|303249825|ref|ZP_07336029.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251648|ref|ZP_07533553.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651392|gb|EFL81544.1| hypothetical protein APP6_1233 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860845|gb|EFM92853.1| hypothetical protein appser6_1700 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 521

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|307260578|ref|ZP_07542270.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306869655|gb|EFN01440.1| hypothetical protein appser12_1530 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 521

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|325578156|ref|ZP_08148291.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159892|gb|EGC72021.1| hypothetical protein HMPREF9417_1032 [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 497

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 100/392 (25%), Positives = 180/392 (45%), Gaps = 24/392 (6%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG---WP 95
           I+ + Y     D      A     +     +++     ++ +++    +    GG     
Sbjct: 100 ILAKLYADNKYDLMWKDKAAEKQFLREYAAMVASGISKRSAQSLVNLHNAEKTGGLTYDV 159

Query: 96  ELPIRPLHLGNSSVSVQRLRER-LIISGDLDPSKGLSVAFDAYVESAVKL-----FQMRH 149
            L    L     S +V +  +R L  +    P        D + +SAVK      F   +
Sbjct: 160 LLSDAFLDYLYYSKNVNQQAQRWLYATNAYKPELPNQEIIDEW-QSAVKNNNVSGF--VN 216

Query: 150 GLDPSGMVDSSTLEAMNV-----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           GL     +   T++++        +    ++L +N  R++ + + + G   + VNIP+  
Sbjct: 217 GLSNHNRLYRETVQSLPSMISASGISEMGKKLALNAQRLRVIPDFENG---IFVNIPSYQ 273

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L+   +GK  L S VIVG+ +R+TP+++SR++ ++ NP W  P  +I +D++  L++DP 
Sbjct: 274 LKYYRDGKAILESRVIVGKNERRTPVMYSRLSNVVVNPPWNAPTRLINEDILPKLKRDPG 333

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           Y   +N  ++D KG  +    ++W+S  +   +  RQ  G  +A+ + K    S +  Y+
Sbjct: 334 YAAAHNYSILDSKGNTIDPYSINWSSIGDRFPYRIRQAAG-DSALGNYKFNMPSSDAIYL 392

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+   R  +SGCVRV     L   LL++   WS      V+ ++KTT   + 
Sbjct: 393 HDTPNHNLFSKKDRALSSGCVRVEKSDQLASILLQEA-GWSEDRKRNVLASKKTTSANIR 451

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           T  PV   Y++AW  ++   Q   DIY  D+ 
Sbjct: 452 TNDPVFLYYVTAWV-ENGQTQVLPDIYKYDDA 482


>gi|32034588|ref|ZP_00134744.1| COG2989: Uncharacterized protein conserved in bacteria
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126207609|ref|YP_001052834.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae L20]
 gi|126096401|gb|ABN73229.1| hypothetical protein APL_0121 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 521

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 131/252 (51%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|307249325|ref|ZP_07531319.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858619|gb|EFM90681.1| hypothetical protein appser4_1390 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 521

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 77/252 (30%), Positives = 132/252 (52%), Gaps = 8/252 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N+ R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNVQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTAWV-ENG 492

Query: 402 IIQFRDDIYGLD 413
            +    DIY  D
Sbjct: 493 KVYTLPDIYKFD 504


>gi|308050064|ref|YP_003913630.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
 gi|307632254|gb|ADN76556.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
          Length = 459

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 90/372 (24%), Positives = 157/372 (42%), Gaps = 7/372 (1%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
                        ++D  I +  P       A+   A+   + I         P++ L L
Sbjct: 88  SPQAQLMAAEQQGQLDRLIANLTPEY--RGFARLRSALVRERQIERVPIPGLAPLQSLGL 145

Query: 105 GNSSVSVQRLRERLII-SGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G S   + +LR  L I  G+ L P+      +D    + +K +Q  +GL  +G +DS+T 
Sbjct: 146 GQSHPDLAQLRRALAIRLGEALPPTLQDRPVWDPPFTALLKQYQDSNGLSATGRLDSATR 205

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +      RI  +Q +L +    L  ++    +LVNIP   L  + +  V L   VIVG
Sbjct: 206 RHLGSVGQDRIAAIQYSLRQW-YQLPDRIEGYAMLVNIPRYELLVLNDEAVELAVPVIVG 264

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
                TP ++S  + +  NP W  P SI++ +++   RQDP  L       + +    + 
Sbjct: 265 SPANPTPKMNSYFSSVTLNPSWTPPMSIVRNELLPGYRQDPTTLHRQGFEWVGKGQSRLP 324

Query: 283 VEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
             +V   +       +  RQ PG+ N +   +         Y+HDT  P LF    R  +
Sbjct: 325 WTQVTPENVNNVLGRYQLRQKPGRNNPLGKVRFNLAQSRAIYLHDTNNPRLFRQSQRALS 384

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKD 400
            GCVRV     +  +LL +  +  +  + + ++   +   ++ + V V+ VY+ AW   D
Sbjct: 385 HGCVRVAEYQRVLDYLLANESSGRQRQVAQALQQHDSVTARVGSRVAVYLVYMPAWVGPD 444

Query: 401 SIIQFRDDIYGL 412
           + +   DD+YG 
Sbjct: 445 NRLHLVDDVYGW 456


>gi|322515092|ref|ZP_08068099.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
 gi|322118898|gb|EFX91080.1| hypothetical protein HMPREF0027_1851 [Actinobacillus ureae ATCC
           25976]
          Length = 530

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 79/254 (31%), Positives = 135/254 (53%), Gaps = 8/254 (3%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           EA     +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVG
Sbjct: 265 EATATTGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVG 321

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++ 
Sbjct: 322 RDDRRTPVMYSKLSNVVVNPPWNIPPTILTKDIIPKLARNPGFAGSAGYEIFDRKGNKIN 381

Query: 283 VEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  
Sbjct: 382 PRSVNWSQYVNSKNIPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRAL 441

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           +SGCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++AW+ +
Sbjct: 442 SSGCVRVERSDDLASILLKEA-GWSMDRKQKVLASQKTTSANIRSDNPVYLYYVTAWA-E 499

Query: 400 DSIIQFRDDIYGLD 413
           +  +    DIY  D
Sbjct: 500 NGKVYTLPDIYKFD 513


>gi|301156058|emb|CBW15529.1| predicted carboxypeptidase [Haemophilus parainfluenzae T3T1]
          Length = 489

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 98/392 (25%), Positives = 176/392 (44%), Gaps = 24/392 (6%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG---WP 95
           I+ + Y     D      A     +     +++     ++ +++    +    GG     
Sbjct: 92  ILAKLYADNKYDLMWKDKAAEKQFLREYAAMVASGISKRSAQSLINLHNAEKTGGLTYDV 151

Query: 96  ELPIRPLHLGNSSVSVQRLRER-LIISGDLDPSKGLSVAFDAYVESAVK-----LFQMRH 149
            L    L     S +V +  +R L  +    P        D + +SAVK      F   +
Sbjct: 152 LLSDAFLDYLYYSKNVNQQAQRWLYATNAYKPELPNQEIIDQW-QSAVKNNAVSDF--VN 208

Query: 150 GLDPSGMVDSSTLEAMNV-----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           GL     +   T++++        +    ++L +N  R++ + + + G   + VNIP+  
Sbjct: 209 GLSNHNRLYRETVQSLPSMISPSGISAIGKKLALNAQRLRIIPDFENG---IFVNIPSYQ 265

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L+   +GKV L S VIVG+ +R+TP+++SR++ ++ NP W  P  +I +D++  L++DP 
Sbjct: 266 LKYYRDGKVLLESRVIVGKNERRTPVMYSRLSNVVVNPPWNAPTRLINEDILPKLKRDPS 325

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           Y   +N  ++D  G  +    ++W+S      +  RQ  G  +A+ + K    S +  Y+
Sbjct: 326 YATAHNYSILDSNGNTINPHSINWSSIGNKFPYRIRQAAG-DSALGNYKFNMPSSDAIYL 384

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           HDTP   LF+   R  +SGCVRV     L   LLK+   WS       + ++KT    + 
Sbjct: 385 HDTPNHSLFSKKDRALSSGCVRVEKSDQLASILLKEA-GWSEDKKRNALASKKTVSANIR 443

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           T  PV   Y++AW  ++       DIY  D+ 
Sbjct: 444 TNDPVFLYYVTAWV-ENGQTHVLPDIYKYDDA 474


>gi|294012199|ref|YP_003545659.1| hypothetical protein SJA_C1-22130 [Sphingobium japonicum UT26S]
 gi|292675529|dbj|BAI97047.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 503

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 31/349 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
             +  +A A +      GG P++P      L  G        LR RL +           
Sbjct: 178 YVKLREARADFAQ--RWGGLPQVPVPADVKLRPGMK-AGAAALRRRLGL--------ASG 226

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
            A+D  + + VK FQ  HGL P G+  ++T+ A+N   D   R + +N+ R + L     
Sbjct: 227 TAYDKALVARVKAFQGDHGLKPDGVAGAATIAALNRGDDHYDRLIALNMERARLLPG--P 284

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
            +R+V+V+  +A L     G       V+VG  + QTP++   +     NPYW +P  ++
Sbjct: 285 QVRHVVVDAASARLWYFSKGAQDGTMKVVVGAKESQTPMMAGMVRYATLNPYWNVPSDLV 344

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFRQDPGKIN 306
           ++ +   +  +   L       + +     +++    VDW +          RQ PG  N
Sbjct: 345 ERKLAPRML-NGASLTKLRYEALSDWSANARKLDPAAVDWRAVADGRTELRVRQLPGGDN 403

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           AM   K  F +    Y+HDTP   L     R  ++GCVR+ +   L  W        +  
Sbjct: 404 AMGKVKFMFPNDLGIYLHDTPSRDLLAKPARQFSNGCVRLEDAQRLGRWFFGKPLKPASD 463

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                        V L   VPV+  Y++A   +D  ++F  D+YG D V
Sbjct: 464 K--------PEQHVPLPQPVPVYLTYLTAVPLEDG-VRFLPDVYGRDGV 503


>gi|332826880|gb|EGJ99680.1| hypothetical protein HMPREF9455_03943 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 593

 Score =  259 bits (661), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 99/436 (22%), Positives = 184/436 (42%), Gaps = 35/436 (8%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
               +  G +   K ++    D + +       N+ +          + +  P  S++  
Sbjct: 151 YITGMKYGFT-DPKNLYKKDYDIVTSAPDSLFYNNLYAEIKKDPISAVLNSQP--SEDIY 207

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV- 132
            +  +     + I   G + E+        LG+ S  ++ +  RL+++G+  P    S  
Sbjct: 208 LRLREEYKLLRTIQETG-FKEITSGDVTYKLGDKSKHIKDIAGRLMLTGEYKPDSISSDS 266

Query: 133 ---AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                D  + +A+  F+ R+       V   T+ A+N P +  + +++ N+ R +    +
Sbjct: 267 LHIKLDEELLAAINTFRRRNSYPEEAEVGKLTISALNRPFEYYLAKIRANMERYRWKRAK 326

Query: 190 KMGLRYVLVNIPAASLEA--VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               +++ VN+ AA L A   +N  + L S V VG V  +TP+L S I+ +  NP W +P
Sbjct: 327 AKHYKHIEVNVAAAMLVANNTKNDSLPLISRVCVGSVRNKTPLLQSDISYMNLNPIWNVP 386

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN--FIFRQDPGKI 305
            SI QK++  L ++DP Y+K +N+ +    GKEV V  +DW    P    +  +QDPG  
Sbjct: 387 ASIAQKEVAVLQKKDPTYIKRHNMKLYKG-GKEVDVSSIDWEDVNPSKFSYTIKQDPGGG 445

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N++   K  F +  + Y+HDTP  + FN   R  + GCVRV+   DL  +         +
Sbjct: 446 NSLGLVKFMFNNAFSVYLHDTPSKLAFNRKNRAVSHGCVRVQKPFDLAFFCASPITEVYK 505

Query: 366 YHIEEVVKT-------------------RKTTPVKLATEVPVHFVYISAWS-PKDSIIQF 405
             +   +                          +    ++ +   Y +A+  P D  + +
Sbjct: 506 DQLYHSINKPPVSDEGKKLLKEQKLKKLPDIINIDKDNKISLFIDYYTAFMYPDDEALYY 565

Query: 406 RDDIYGLDNVHVGIIP 421
            DDIY  D + +  + 
Sbjct: 566 ADDIYEYDKLILDALN 581


>gi|212635459|ref|YP_002311984.1| hypothetical protein swp_2663 [Shewanella piezotolerans WP3]
 gi|212556943|gb|ACJ29397.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 457

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 9/350 (2%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL---DPS 127
           S + I      I  Y+ + S   WP+L      LG  +  + +LR  L+   DL   D S
Sbjct: 107 SNKQIKALRDKIRQYEQL-SNYQWPQLEASVFSLGQRATDIAKLRWVLVKLDDLEFKDIS 165

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 FD  +  ++K FQ RHGL  SG ++  T+  +N      + +LQ++L      +
Sbjct: 166 AYREAIFDPSITRSLKRFQKRHGLIQSGELNKETITLLNTEPAFIVSKLQLSLKDKLSKV 225

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +    Y+ VNIP   L    +    L   VIVG +  +TP+LH+ +++I  NP W  P
Sbjct: 226 NYQ-NSSYIEVNIPEFKLRIKGDESSTLEFPVIVGSIKNKTPLLHTYVSKITINPTWTPP 284

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN----FIFRQDPG 303
           RSI+  +++A L++ P+ L++    ++ +            ++         +   Q PG
Sbjct: 285 RSIVYNELLAELKKSPKSLENQKFVLVKKGNTNEVKSLKGMDASRLKQELKVYQLVQSPG 344

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             NA+   +    +    +MHDTP+   F    R  + GC+R+     L  +L+    + 
Sbjct: 345 FRNALGKYRFTIPNSELIFMHDTPDKQAFKKRNRAISHGCIRLSQPELLAKYLIDRENSI 404

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                    K   T  +KL   +P+     + W  KD+++Q R  +Y  +
Sbjct: 405 ESIRFLSARKGVNTVDIKLRNPIPIIITNHNVWVDKDNVLQVRPSVYNRE 454


>gi|152993088|ref|YP_001358809.1| hypothetical protein SUN_1501 [Sulfurovum sp. NBC37-1]
 gi|151424949|dbj|BAF72452.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 397

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 93/361 (25%), Positives = 146/361 (40%), Gaps = 50/361 (13%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
              +       +P        +  + I +   I        +   PL  GN    + R++
Sbjct: 75  YGDLFEYTMQLLPQ--SRRYIELRRYIDYLYSIRD------VYTPPLFRGNEVEDIMRIK 126

Query: 116 ERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
               + G  DL     ++ +F      AVK +Q RHGL+  G +   T  +M  P+   I
Sbjct: 127 AIFRLLGIADLPDDPYITDSF----IEAVKEYQRRHGLEVDGKIGPQTRRSMKQPISSII 182

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R+++ NL+    +   +    YVLVNIP  ++   ENG   L   V+VG+   +TP+ H 
Sbjct: 183 RKVKKNLVLKSIV--HEKPATYVLVNIPEFAMHYYENGWPALNMKVVVGKPKMRTPVFHR 240

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            +  I+ NP W +P SI  K+          YL+   +   +  GK              
Sbjct: 241 NMQYIVENPRWNVPPSIYAKEYANKSE---SYLRKKGL-FYNSDGK-------------- 282

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                 Q PG+ N++   K  F +R N YMHDTP   LF    R  + GC+R+     L 
Sbjct: 283 ----LYQRPGRRNSLGLVKFLFPNRFNVYMHDTPSKYLFKRYRRAYSHGCIRLEKPFALL 338

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
                         +    +  KT  + L   +PV+  Y + W   + I+QFR DIYG +
Sbjct: 339 N------------KLGYTYRPGKTRWITLKHTIPVYVEYHTVWVDDNGIVQFRPDIYGYE 386

Query: 414 N 414
            
Sbjct: 387 R 387


>gi|15602135|ref|NP_245207.1| hypothetical protein PM0270 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720500|gb|AAK02354.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 515

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 128/243 (52%), Gaps = 8/243 (3%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + ++ +N  R++ +     G   + VNIP+  L    +GK+ L S VIVG+  R+TP+L+
Sbjct: 261 LYKIAINAQRLRVIPTFDNG---LFVNIPSYQLHYYRDGKLILTSKVIVGKKARKTPVLY 317

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           S+++ ++ NP W  P  +I +D++  +R+DP Y+  N   +ID KGK +    +DW +  
Sbjct: 318 SKLSDVVVNPPWNTPTRLINEDIIPRVRKDPSYIYRNGYTIIDSKGKTIDPYTIDWENMT 377

Query: 293 P--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  RQ PG  +A+ + K    S +  Y+HDTP   LF       +SGCVRV    
Sbjct: 378 AKKFPYRLRQAPG-DSALGNFKFNMPSSDAIYLHDTPSRGLFAKKDLALSSGCVRVEKAD 436

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   LLK+   WS       VK+RKT  V +A+  PV   Y++AW   +       DIY
Sbjct: 437 ELASVLLKEA-GWSEERKVNTVKSRKTISVNVASNNPVFLYYVTAWVN-NGKTHTLPDIY 494

Query: 411 GLD 413
           G D
Sbjct: 495 GYD 497


>gi|288959756|ref|YP_003450096.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
 gi|288912064|dbj|BAI73552.1| hypothetical protein AZL_a00210 [Azospirillum sp. B510]
          Length = 545

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 80/302 (26%), Positives = 139/302 (46%), Gaps = 4/302 (1%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V +L  RLI  G L   K     F+  VE+AV+ FQ   GL P G V   T +A++  
Sbjct: 170 DRVGKLSRRLIELGLLPADKWTDS-FNDDVEAAVRAFQTTEGLQPDGKVGEVTRQALDRT 228

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               +           +  +  +    +LVN+P  S+  +E+G+       +VGR  R+T
Sbjct: 229 PAQTVAL-LRRAAAAMRAQQASIPDTSILVNLPGQSVTLIEHGRPTFTMRAVVGRPSRKT 287

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+L  ++  +  NP W +P +++ +D +  LR+       N +  +D   +    + V+W
Sbjct: 288 PLLQDKVTSVTINPTWTVPPTVLSEDKLPALRKKGTTGIKNAVVYLDGA-EVASTQSVNW 346

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S +P      Q PG  NA+   +    + +  ++H T +P LF+  +R  +SGCVR+ +
Sbjct: 347 WSVDPGRVRIVQKPGDDNALGRFRFNLTNGDGIFLHGTNDPRLFSRDLRAASSGCVRLED 406

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
              +   LL      +   I + + T  T  ++L   +PV FVY +A      +++   D
Sbjct: 407 ARLMAETLL-GAAKVTPAGIGQQLDTGDTKTIRLPVAIPVRFVYWNASVDTAGVVRVHPD 465

Query: 409 IY 410
           IY
Sbjct: 466 IY 467


>gi|255530583|ref|YP_003090955.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255343567|gb|ACU02893.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 471

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 22/301 (7%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G LD  +  S  +   +++A+K                  ++A    +      L++NL 
Sbjct: 189 GYLDSIQPKSGQY-LALQAALKA----------------QVQAQEKTISQTGELLKLNLE 231

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R++    +  GL+YV VNI   SL+ ++ GK+ LR  V VG   RQTP L S I  +  N
Sbjct: 232 RLRWK-NRPPGLKYVRVNIADFSLDVIDKGKLVLRMKVCVGEAARQTPQLSSMIYSVQVN 290

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W IP SI + +++    +D  YL +N+I++     +   +E +DW   EP ++ F+Q 
Sbjct: 291 PVWNIPESIARNEIIKYASRDKYYLANNSINVFKNGKRVWDLEAIDWGKAEPGSYSFKQR 350

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N++   K  F + ++ Y+HDTP    FN   R  + GCVRV   ++L   L    P
Sbjct: 351 PGMKNSLGKIKFLFKNESSVYLHDTPVKSAFNQKNRAISHGCVRVEKPLELAFVLFGKGP 410

Query: 362 TWSRYHIEEVVKTR--KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
            +    ++  +++   +   + L T +P+   Y +A + +   + F  DIYGLD++    
Sbjct: 411 KYD--QVKNAMQSGYPREKYIGLPTAIPISIAYYTALADQQGKVIFNKDIYGLDDMLAEE 468

Query: 420 I 420
           +
Sbjct: 469 L 469


>gi|257465088|ref|ZP_05629459.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
 gi|257450748|gb|EEV24791.1| hypothetical protein AM202_01165 [Actinobacillus minor 202]
          Length = 537

 Score =  256 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 77/256 (30%), Positives = 135/256 (52%), Gaps = 8/256 (3%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           ++ +         +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIV
Sbjct: 271 VDEVAATGSSSFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDGQLALQSKVIV 327

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR DR+TP+++S+++ ++ NP W +P SI+ KD++  L ++P      +  ++D  G +V
Sbjct: 328 GREDRRTPVMYSKLSNVVVNPPWNVPTSILTKDIVPKLARNPGIADSLSYEILDGSGNKV 387

Query: 282 FVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
               V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R 
Sbjct: 388 NPRSVNWSQYLNAKSIPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNHGLFSRTDRA 447

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            +SGCVRV    +L   LLK+   WS    + V+ ++KTT   + ++ PV+  Y+++W  
Sbjct: 448 LSSGCVRVAKSSELASILLKEA-GWSAEKQQSVLASKKTTSANIRSDNPVYLYYVTSWV- 505

Query: 399 KDSIIQFRDDIYGLDN 414
           +   +    DIY LDN
Sbjct: 506 EGGKVYTLPDIYKLDN 521


>gi|240948089|ref|ZP_04752499.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
 gi|240297569|gb|EER48061.1| hypothetical protein AM305_04803 [Actinobacillus minor NM305]
          Length = 539

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 136/266 (51%), Gaps = 17/266 (6%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
              G+V                 +L +N  R++ +     G   + VNIP+  L    +G
Sbjct: 272 PVDGIV---------ATGSNSFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLYYFRDG 319

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           ++ L+S VIVGR DR+TP+++S+++ ++ NP W +P SI+ KD++  L ++P      + 
Sbjct: 320 QLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSILTKDIVPKLARNPGIADSLSY 379

Query: 272 HMIDEKGKEVFVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            ++D  G +V    V+W+     +   +  RQ  G  +A+   K    S +  Y+HDTP 
Sbjct: 380 EILDGSGNKVNPRSVNWSQYLNAKSIPYRIRQKAGDDSALGRYKFNMPSSDAIYLHDTPN 439

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
             LF+   R  +SGCVRV    +L   LL++   WS    + V+ ++KTT V + ++ PV
Sbjct: 440 HGLFSRTDRALSSGCVRVNKSSELASILLREA-GWSAEKQQSVLASKKTTSVNIRSDNPV 498

Query: 389 HFVYISAWSPKDSIIQFRDDIYGLDN 414
           +  Y+++W  +   +    DIY LD+
Sbjct: 499 YLYYVTSWV-EGGKVYTLPDIYKLDS 523


>gi|219872270|ref|YP_002476645.1| hypothetical protein HAPS_2267 [Haemophilus parasuis SH0165]
 gi|219692474|gb|ACL33697.1| conserved hypothetical protein [Haemophilus parasuis SH0165]
          Length = 516

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 128/248 (51%), Gaps = 8/248 (3%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
                QL +N  R++ +     G   + VNIP+  L     GK+ L+S VIVGR DR+TP
Sbjct: 258 TPSFTQLALNAQRLRLIPSFNNG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTP 314

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +++S+++ ++ NP+W +P +I  KD++  LR+DP         ++D KG +     ++W 
Sbjct: 315 VMYSKLSNVVVNPHWNVPSTIKNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWA 374

Query: 290 SP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +        +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV
Sbjct: 375 AYEGKNNFPYHIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRV 434

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
               +L   LL +   WS    ++V+ ++KTT   + ++ PV+  Y+++W  +   I   
Sbjct: 435 AKADELATLLLAEA-GWSAQRKQDVLASKKTTSAPIRSDNPVYLYYVTSWI-EGGKIYTL 492

Query: 407 DDIYGLDN 414
            DIY  D 
Sbjct: 493 PDIYQFDK 500


>gi|330448515|ref|ZP_08312163.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328492706|dbj|GAA06660.1| hypothetical protein PMSV_2819 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 569

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 81/338 (23%), Positives = 145/338 (42%), Gaps = 21/338 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           LG++      +   L   G L             +     +  A+K F+  +GL   G++
Sbjct: 217 LGDTIPHGSDVATVLWNLGYLTQPQYQQVIAQKKITNTGVMNQAIKAFETNYGLKADGIM 276

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
               +  +  P     R   +NL R +    +  G + ++VNIP  ++   +N K    S
Sbjct: 277 GPEVVAQLTCPYSSLARIAALNLQRERFAQLEGDGPQ-IIVNIPDYTMTLYDNQKPVFES 335

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            +I G   R T +  + IN ++ NPYW +P +I  ++ +   + +P +L+ N + +I+  
Sbjct: 336 DIIDGMPKRPTNLFQTYINTVVINPYWYVPETIKVQNTIPSAKANPNFLQRNRMDVINSW 395

Query: 278 G--KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI--L 331
                V    ++W +  P  F   FRQDPG  NA+           + YMHD  +    L
Sbjct: 396 SDRSVVPPSSINWATVNPKTFPHEFRQDPGPENALGRVAFLMPDSFSVYMHDEEQSEYPL 455

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F    R  +SGC+RV+   ++   +L      +   +++++ + K   + L   V +   
Sbjct: 456 FKRRHRDLSSGCMRVQKPREMAKLILSYQNMPNLPSVDDMINSNKHREIGLKKHVDLDVA 515

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHPID 429
           Y+++W   D  +  R DIYG DN        P   PI+
Sbjct: 516 YLTSWVTPDGQLAMRPDIYGYDN--------PRTKPIN 545


>gi|167855604|ref|ZP_02478364.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
 gi|167853295|gb|EDS24549.1| hypothetical protein HPS_03656 [Haemophilus parasuis 29755]
          Length = 516

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 127/248 (51%), Gaps = 8/248 (3%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
                QL +N  R++ +     G   + VNIP+  L     GK+ L+S VIVGR DR+TP
Sbjct: 258 TPSFTQLALNAQRLRLIPSFNNG---IFVNIPSYQLYYFREGKLVLQSKVIVGRNDRKTP 314

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +++S+++ ++ NP W +P +I  KD++  LR+DP         ++D KG +     ++W 
Sbjct: 315 VMYSKLSNVVVNPPWNVPSTIKNKDLVPKLRKDPILADKLGYEILDGKGNKFSAHSINWA 374

Query: 290 SP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +        +  RQ  G  +A+   K    S +  Y+HDTP   LF+   R  +SGCVRV
Sbjct: 375 AYEGKNNFPYHIRQKAGDDSALGRYKFNMPSSDAIYLHDTPNRGLFSKKNRALSSGCVRV 434

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
               +L   LL +   WS    ++V+ ++KTT   + ++ PV+  Y+++W  +   I   
Sbjct: 435 AKADELATLLLAEA-GWSAQRKQDVLASKKTTSAPIRSDNPVYLYYVTSWI-EGGKIYTL 492

Query: 407 DDIYGLDN 414
            DIY  D 
Sbjct: 493 PDIYQFDK 500


>gi|152978757|ref|YP_001344386.1| hypothetical protein Asuc_1085 [Actinobacillus succinogenes 130Z]
 gi|150840480|gb|ABR74451.1| conserved hypothetical protein [Actinobacillus succinogenes 130Z]
          Length = 494

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 6/242 (2%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           +L +N  R++ + +   G   + VNIP+  L    NG++ L S VIVG+ +R+TP+++S+
Sbjct: 243 KLAINAQRLRIIPDFYNG---IFVNIPSYQLNYYRNGRLTLNSRVIVGKNNRRTPVMYSK 299

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP-EP 293
           ++ ++ NP W  P  +I +D++  +++DP YL  +   +ID KG  V    ++W S    
Sbjct: 300 LSNVVVNPPWNAPTRLINEDIIPKVKRDPNYLVRHGYSIIDGKGNTVNPYNINWGSIGNK 359

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +  RQ  G  +A+   K    S +  Y+HDTP   LFNN  R  +SGCVRV     L 
Sbjct: 360 FPYRLRQAAGDNSALGRYKFNMPSSDAIYLHDTPNHALFNNKNRALSSGCVRVDKSDQLA 419

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             LL +   WS    + V+ ++KTT   + ++ PV+  Y++ W  ++  +Q   DIYG D
Sbjct: 420 SILLSEA-GWSSDKKQRVLNSKKTTSAPILSDNPVYLYYVTTWV-ENGKVQSVPDIYGYD 477

Query: 414 NV 415
            V
Sbjct: 478 RV 479


>gi|239995151|ref|ZP_04715675.1| peptidoglycan binding domain-containing protein [Alteromonas
           macleodii ATCC 27126]
          Length = 481

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 13/321 (4%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-L 102
             +      ++ L          +     E     EK  +    + +     ++P+ P L
Sbjct: 157 READPVASLNHALTNGVSATLRAMWPSHHEYQLLLEKKRSLLTAVSTVTT--QIPVGPTL 214

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            L ++S  V  L+ RL+           S  FD  +  AVK FQM  G++P G+V SSTL
Sbjct: 215 KLNSTSERVVLLKSRLL------GPGTYSELFDKDLLDAVKQFQMSAGIEPDGIVGSSTL 268

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           EA+N      + ++  NL R + L  Q     Y+ VNI +  L     G+  L   VIVG
Sbjct: 269 EALNATTFSWLERIDANLERWRWLPHQTW-STYLRVNIASFQLRGFTEGEETLGMPVIVG 327

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
              RQTP+    +  ++FNPYW +P SI  KD +A L+ +P  L +              
Sbjct: 328 TPVRQTPVFAESMKYMVFNPYWTVPFSIATKDKLAKLKTNPSLLVEQGYEAQPAGVSGFS 387

Query: 283 V-EEVDWNSPEPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
             ++ DW +      ++  RQ PG  NA+   K    +++  Y+HDTP+  LF+ + R  
Sbjct: 388 PVDKFDWTNVSRGTFHYTLRQKPGPHNALGKVKFMLPNKHAIYLHDTPDHSLFSKLERNF 447

Query: 340 TSGCVRVRNIIDLDVWLLKDT 360
           +SGC+RV N + L  W+L  +
Sbjct: 448 SSGCIRVSNPLKLSQWVLTHS 468


>gi|146329173|ref|YP_001209233.1| lipoprotein [Dichelobacter nodosus VCS1703A]
 gi|146232643|gb|ABQ13621.1| conserved hypothetical lipoprotein [Dichelobacter nodosus VCS1703A]
          Length = 505

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 25/322 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAY--------------VESAVKL---FQMRHGLDPSGM---V 157
           L ++GDL          D                + + ++    F   H ++        
Sbjct: 182 LALAGDLANGIVDPKTIDKEWNAEPVSDEQLMEWLAAGIRNHDIFTPLHQINADNRRYQT 241

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
                 A+          L +N+ R++ +  Q  G +YV+ NIPA ++E   + +    +
Sbjct: 242 LKERYNALRAQGTKATDGLIINMERLRWMP-QDWGEQYVITNIPAFNVEMYRDERKIYET 300

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
             +VGR DR TP   ++I  ++ NP W +P +I+++D +  L+ +P      +   +   
Sbjct: 301 RAVVGRADRATPRFINKIQHVVINPTWTVPPTIMRQDKLPKLKNNPAAFDA-SYEAVSAS 359

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           GK      V W+  E   +  RQ  G+ NA+   K  F +++  YMHDTP   LF    R
Sbjct: 360 GKIAKPSSVSWS--EGNGYSLRQKSGQYNALGRVKFLFPNKHAIYMHDTPTRHLFKQNNR 417

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
             +SGC+R++  ++L   LL D   W+   I+  +   K   V    E PV+ VY + + 
Sbjct: 418 ARSSGCIRLQKPLELAEILLADN-GWNAQKIQASIAKEKQQWVNPVKETPVYLVYWTTYV 476

Query: 398 PKDSIIQFRDDIYGLDNVHVGI 419
             ++ I+   D+YGLD   +  
Sbjct: 477 DANNTIKTTPDVYGLDKKLIRA 498


>gi|165975577|ref|YP_001651170.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165875678|gb|ABY68726.1| hypothetical protein APJL_0122 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 521

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 77/253 (30%), Positives = 130/253 (51%), Gaps = 8/253 (3%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                +    +L +N  R++ +     G   + VNIP+  L    +G++ L+S VIVGR 
Sbjct: 258 ATATGNDTFYKLALNAQRLRIIPSFNNG---IFVNIPSYQLFYFRDGQLALQSKVIVGRD 314

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           DR+TP++HS+++ ++ NP W IP +I+ KD++  L ++P +       + D KG ++   
Sbjct: 315 DRRTPVMHSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKGNKINPR 374

Query: 285 EVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
            V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF    R  +S
Sbjct: 375 SVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKTDRALSS 434

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++ W  ++ 
Sbjct: 435 GCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIPSDNPVYVYYVAPWV-ENG 492

Query: 402 IIQFRDDIYGLDN 414
            +    DIY  D 
Sbjct: 493 KVYTLRDIYEFDA 505


>gi|300773386|ref|ZP_07083255.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300759557|gb|EFK56384.1| peptidoglycan-binding domain 1 protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 488

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 14/258 (5%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG------------- 222
           + + L +++ + +     +YV+VNIP   L  V+N K      V VG             
Sbjct: 226 ICLTLEKLRWMGK-DFPEKYVVVNIPEQKLRMVDNRKTKDVMNVCVGETIYGPYARRAGA 284

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             + +TP+L   ++R+  NP W IP SI++K++++ LR +P YL+  N+   ++KG+ V 
Sbjct: 285 TDNHETPVLSGELDRMQVNPVWNIPVSIVKKELISSLRSNPNYLESRNMVAYNKKGQMVD 344

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              VDW+S    NF F+Q+PG  N++ + K  F +  + Y+HDTP   +F+   R  + G
Sbjct: 345 PNTVDWSSDSVLNFKFKQNPGADNSLGNIKFIFSNPYSIYLHDTPAKQMFSAKNRAVSHG 404

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           CVRV     L  +L+ D     +   E      K+  V +   +PV+  Y + W   D  
Sbjct: 405 CVRVERPAALAAFLVNDDKKAEQIATEIADTLNKSRWVMMKKTIPVYITYYTTWVDDDGK 464

Query: 403 IQFRDDIYGLDNVHVGII 420
           +    DIYG D      +
Sbjct: 465 LYRLPDIYGYDERLKKAM 482


>gi|323497656|ref|ZP_08102673.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
 gi|323317405|gb|EGA70399.1| hypothetical protein VISI1226_22555 [Vibrio sinaloensis DSM 21326]
          Length = 469

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 81/308 (26%), Positives = 146/308 (47%), Gaps = 9/308 (2%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
           ++   I++  P  S     Q             +   P      +  G+  V    L  R
Sbjct: 147 QMAELIEAYTPDSS--EYQQLIDTYLHIVKFQKQRIAPVAERGVIRPGDKLVDKAVLLAR 204

Query: 118 L-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           L ++  DL      +  +D  +  A+K FQ  HGL+P G++   TL+ +N+ +  R+  L
Sbjct: 205 LEVVDVDLTDVDRTAAFYDKSLVPAIKQFQQLHGLNPDGIIGPQTLKWLNLSLSSRLSTL 264

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            +N  R++    +      ++VN+P+  +    +GK    S V+VGR  R TP++ + ++
Sbjct: 265 ALNAERVRYWPSE--HDSIIVVNVPSYEMTYWHDGKAVFESKVVVGRKARPTPLMVTNLD 322

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE--VFVEEVDWNSPEPP 294
            ++ NP W +P +I+ +D++  +++DP+Y+   +I ++ + G +  +   E+DW S  P 
Sbjct: 323 TLILNPTWNVPWTIMVEDIIPKIQKDPEYITKQHIEILPKWGSKERIDPLEIDWESLNPK 382

Query: 295 NFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            F +R  Q  G  NA+   K    +    Y+HDTP   LF+   R  +SGC+RV N    
Sbjct: 383 AFPYRMTQMSGSRNALGLYKFNTPNNRAIYLHDTPSKGLFSQPKRAFSSGCIRVENADVF 442

Query: 353 DVWLLKDT 360
              LL+  
Sbjct: 443 ASRLLEVQ 450


>gi|227536728|ref|ZP_03966777.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243420|gb|EEI93435.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 488

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 15/275 (5%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
              L+   +  + +     + L +++   +     +Y++VNIP   L  V+N K      
Sbjct: 210 QELLQKGGLNKEEKENIY-LTLEKLRWRGK-DFPEKYIIVNIPEQKLRMVDNRKTKEVMN 267

Query: 219 VIVG-------------RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           V VG               + +TP+L   ++R+  NP W IP SI++K++++ LR +P Y
Sbjct: 268 VCVGETIYGPYARRAGATDNHETPVLSGELDRMQVNPVWNIPASIVKKELISSLRSNPNY 327

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L+  N+   ++KG+ V    VDW+S    NF F+Q+PG  N++ + K  F +  + Y+HD
Sbjct: 328 LESRNMVAYNKKGQMVDPNTVDWSSDSVLNFKFKQNPGADNSLGNIKFIFSNPYSIYLHD 387

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           TP   +F+   R  + GCVRV     L  +L+ D     +   E      K+  V +   
Sbjct: 388 TPAKQMFSAKNRAVSHGCVRVEKPAALAAFLVNDEKKAEQIATEIADTLNKSRWVMMKKT 447

Query: 386 VPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           +PV+  Y + W   +  +    DIYG D      +
Sbjct: 448 IPVYITYYTTWVDDEGKLYKLPDIYGYDERLKKAM 482


>gi|148825793|ref|YP_001290546.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
 gi|148715953|gb|ABQ98163.1| hypothetical protein CGSHiEE_03720 [Haemophilus influenzae PittEE]
          Length = 489

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|90578006|ref|ZP_01233817.1| hypothetical amidase [Vibrio angustum S14]
 gi|90441092|gb|EAS66272.1| hypothetical amidase [Vibrio angustum S14]
          Length = 569

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 81/324 (25%), Positives = 139/324 (42%), Gaps = 21/324 (6%)

Query: 118 LIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L   G L             +     +  A+K F+  +GL   G++    +  +  P   
Sbjct: 231 LWNLGYLTQPQYQQIVAQTKITNSGVLNQAIKAFEENYGLKADGIIGPDVVSQLTRPYSS 290

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            +R   +NL R +    +  G + ++VNIP   +   +N +    S +I G   R T + 
Sbjct: 291 LVRLAALNLQRERFAQLEGDGPQ-IIVNIPDYKMTLYDNQEPVFESKIIDGMPKRPTNLF 349

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWN 289
            S IN ++ NPYW +P +I  ++ +   + +P +L +N + +I+       V    +DW 
Sbjct: 350 QSYINTVVINPYWYVPETIKVQNTIPSAKANPNFLANNRMDVINSWSDRSVVPPSSIDWA 409

Query: 290 SPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI--LFNNVVRFETSGCVR 345
           +  P  F   FRQDPG  NA+           + YMHD  +    LF    R  +SGC+R
Sbjct: 410 TVNPKTFAHEFRQDPGPENALGRVAFLMPDSFSVYMHDESQSEYPLFKRRHRDLSSGCMR 469

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V+    +  ++L      +   +++++ T     + L T V +   Y++AW   +  +  
Sbjct: 470 VQQPRKMATFILSYQNMPNLPSVDDMINTNNHREIGLNTHVNLDVAYLTAWVTPNGQLAM 529

Query: 406 RDDIYGLDNVHVGIIPLPEDHPID 429
           R DIYG DN        P   PI 
Sbjct: 530 RPDIYGYDN--------PRAKPIQ 545


>gi|319896895|ref|YP_004135090.1| hypothetical protein HIBPF05750 [Haemophilus influenzae F3031]
 gi|317432399|emb|CBY80754.1| conserved hypothetical protein [Haemophilus influenzae F3031]
          Length = 489

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|16273554|ref|NP_439809.1| hypothetical protein HI1667 [Haemophilus influenzae Rd KW20]
 gi|260581261|ref|ZP_05849079.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
 gi|1176067|sp|P44285|Y1667_HAEIN RecName: Full=Putative L,D-transpeptidase HI_1667
 gi|1574515|gb|AAC23312.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|260092088|gb|EEW76033.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
          Length = 489

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 77/242 (31%), Positives = 131/242 (54%), Gaps = 7/242 (2%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++S
Sbjct: 237 QKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMYS 293

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S + 
Sbjct: 294 KLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIDN 353

Query: 294 -PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     L
Sbjct: 354 KFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQL 412

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG 
Sbjct: 413 ASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYGY 470

Query: 413 DN 414
           D 
Sbjct: 471 DR 472


>gi|301170424|emb|CBW30030.1| conserved hypothetical protein [Haemophilus influenzae 10810]
          Length = 487

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 467

Query: 412 LDN 414
            D 
Sbjct: 468 YDR 470


>gi|309972939|gb|ADO96140.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2846]
          Length = 489

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|68250268|ref|YP_249380.1| hypothetical protein NTHI1968 [Haemophilus influenzae 86-028NP]
 gi|148827093|ref|YP_001291846.1| hypothetical protein CGSHiGG_02060 [Haemophilus influenzae PittGG]
 gi|319776086|ref|YP_004138574.1| hypothetical protein HICON_14350 [Haemophilus influenzae F3047]
 gi|68058467|gb|AAX88720.1| conserved hypothetical protein [Haemophilus influenzae 86-028NP]
 gi|148718335|gb|ABQ99462.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae PittGG]
 gi|309750756|gb|ADO80740.1| Putative murein L,D-transpeptidase [Haemophilus influenzae R2866]
 gi|317450677|emb|CBY86897.1| conserved hypothetical protein [Haemophilus influenzae F3047]
          Length = 489

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|329123250|ref|ZP_08251818.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
 gi|327471459|gb|EGF16907.1| hypothetical protein HMPREF9095_1036 [Haemophilus aegyptius ATCC
           11116]
          Length = 487

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 77/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 467

Query: 412 LDN 414
            D 
Sbjct: 468 YDR 470


>gi|325104437|ref|YP_004274091.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
 gi|324973285|gb|ADY52269.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter saltans DSM 12145]
          Length = 493

 Score =  249 bits (635), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 130/266 (48%), Gaps = 11/266 (4%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------- 224
            ++ +NL R++  +      +++LVNIP   L   +N K  L   V VG           
Sbjct: 229 ERIFLNLERLRWKIS-DFPEKFILVNIPEFKLRLYDNHKEALAMKVCVGATANPPYSKNG 287

Query: 225 -DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            + +TP+L   I+R+  NP W IP+SI  K++M  L ++P YL ++N+   D+ G  V  
Sbjct: 288 QNHETPVLSGTIDRMQINPVWNIPKSIAGKEIMTKLVENPSYLDESNMVAYDKSGAAVNA 347

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
           + VDW+S    ++ F+Q+PG  N++   K  FY+    Y+HDTP   +FN   R  + GC
Sbjct: 348 QSVDWSSASVDDYSFKQNPGSDNSLGRVKFIFYNPYAIYLHDTPAKQMFNEKNRAVSHGC 407

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           VRV   + L  +LL D     +   E      ++  VK+   V V+  Y +A++     I
Sbjct: 408 VRVEQPLKLVDFLLNDQKESEKVKSEITGSDNESRWVKVKDPVKVYLAYYTAFADDKDGI 467

Query: 404 QFRDDIYGLDNVHVGIIPLPEDHPID 429
            + DD+YG D      +       I+
Sbjct: 468 TWVDDVYGYDPKLKAALENYLPQTIN 493


>gi|229845074|ref|ZP_04465210.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
 gi|229812046|gb|EEP47739.1| hypothetical protein CGSHi6P18H1_00944 [Haemophilus influenzae
           6P18H1]
          Length = 489

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|145639176|ref|ZP_01794783.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
 gi|145271738|gb|EDK11648.1| hypothetical protein CGSHiII_04039 [Haemophilus influenzae PittII]
          Length = 489

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 131/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG+  R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGKNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|145633343|ref|ZP_01789074.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145634471|ref|ZP_01790181.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
 gi|144986189|gb|EDJ92779.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 3655]
 gi|145268451|gb|EDK08445.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittAA]
          Length = 489

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|229846898|ref|ZP_04467005.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
 gi|229810387|gb|EEP46106.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae 7P49H1]
          Length = 489

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|260582628|ref|ZP_05850417.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
 gi|260094300|gb|EEW78199.1| alpha-ketoglutarate decarboxylase [Haemophilus influenzae NT127]
          Length = 489

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 129/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIY 
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYD 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|145631483|ref|ZP_01787252.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
 gi|144982913|gb|EDJ90426.1| hypothetical protein CGSHi22421_02471 [Haemophilus influenzae
           R3021]
          Length = 489

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 76/243 (31%), Positives = 130/243 (53%), Gaps = 7/243 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNHGLFNRKNRALSSGCVRIEKSDQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
           L   LLK+   W+      V+ ++KTT   + ++ PV   Y++AW  ++  I    DIYG
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVFLYYVTAWI-ENGNIVNLPDIYG 469

Query: 412 LDN 414
            D 
Sbjct: 470 YDR 472


>gi|113461215|ref|YP_719284.1| hypothetical protein HS_1072 [Haemophilus somnus 129PT]
 gi|112823258|gb|ABI25347.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 475

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 75/254 (29%), Positives = 134/254 (52%), Gaps = 7/254 (2%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +       + +L +N  R++ + +   G   + VNIP+  L    +GK+ L S VIVG
Sbjct: 212 KLIPQDDKSILYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGKLVLNSKVIVG 268

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  R+TP+++S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ + 
Sbjct: 269 KKARKTPVMYSKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVID 328

Query: 283 VEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
              +DWN+      +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +S
Sbjct: 329 PSSIDWNTIGTNFPYRIRQAPG-GSALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSS 387

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV     L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D 
Sbjct: 388 GCVRVEKSDQLATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND- 445

Query: 402 IIQFRDDIYGLDNV 415
           +++   DIY  D V
Sbjct: 446 VVKTLPDIYEYDQV 459


>gi|149277939|ref|ZP_01884078.1| putative periplasmic protein [Pedobacter sp. BAL39]
 gi|149231137|gb|EDM36517.1| putative periplasmic protein [Pedobacter sp. BAL39]
          Length = 501

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 47/327 (14%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            LD  +     +   ++ A++           G +         +  +   R L+ NL R
Sbjct: 188 YLDSIQPKDPQY-LALQEALRQ----------GAMGQ------GMNKEESSRVLKANLER 230

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR------------------- 223
           ++    +    +YVLVNI   +L+ V+N K  L+  V VG                    
Sbjct: 231 LRWK-NKPTQQKYVLVNIADFTLDVVDNNKSVLKMKVCVGEGRNENFKDRVLKEYDETGL 289

Query: 224 -----VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                  R+TP L+S I+ +  NP W IP SI  K++     +D  YL +NNI + +   
Sbjct: 290 KKDRPFSRETPQLNSMIHSVQVNPVWNIPESIATKEISRYAAKDRFYLSNNNIDVFENGK 349

Query: 279 KEVFVEEVDWNSPEPP-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           +    E +D+++ +    + F+Q PG  N++   K  F +  + Y+HDTP    F+  VR
Sbjct: 350 RIEDPETIDFSAGDAGSRYTFKQRPGNDNSLGKIKFLFKNDESVYLHDTPAKAAFDLPVR 409

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT--TPVKLATEVPVHFVYISA 395
             + GCVRV    +L   L  D   +    I++ +++++     + L+ +VPV+  Y +A
Sbjct: 410 AVSHGCVRVEKPSELAKALFGDGQKY--QTIQKEMQSKQPVAKDISLSPQVPVYLTYFTA 467

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           W  +   +QFR DIYGLD V    +  
Sbjct: 468 WKDEQGNMQFRKDIYGLDIVLDSYLQR 494


>gi|170717815|ref|YP_001784877.1| hypothetical protein HSM_1557 [Haemophilus somnus 2336]
 gi|168825944|gb|ACA31315.1| conserved hypothetical protein [Haemophilus somnus 2336]
          Length = 475

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 73/254 (28%), Positives = 134/254 (52%), Gaps = 7/254 (2%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           + +       + +L +N  R++ + +   G   + VNIP+  L    +G++ L S VIVG
Sbjct: 212 KLIPQDDKSILYKLAINAQRLRIIPDFNNG---IFVNIPSYQLNYYRDGELVLNSKVIVG 268

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +  R+TP+++S+++ I+ NP W+    +I +D++  ++ DP Y+  N+  + D KG+ + 
Sbjct: 269 KKARKTPVMYSKLSNIVVNPPWIPTPRLINEDIVPKIKLDPDYVARNSYTISDSKGQVID 328

Query: 283 VEEVDWNSP-EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
              ++WN+      +  RQ PG  +A+ + K    S +  Y+HDTP   LF+   R  +S
Sbjct: 329 PSSINWNTIGTNFPYRIRQAPG-GSALGNYKFNMPSSDAIYLHDTPNRGLFSKKNRALSS 387

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV     L   LL +   W+    + V+ ++K T   + ++ PV+  Y++ W   D 
Sbjct: 388 GCVRVEKSDQLATILLTEA-GWTEERKQNVLNSKKNTSENIRSDNPVYLYYVTTWVEND- 445

Query: 402 IIQFRDDIYGLDNV 415
           +++   DIY  D V
Sbjct: 446 VVKTLPDIYEYDQV 459


>gi|89076172|ref|ZP_01162529.1| hypothetical amidase [Photobacterium sp. SKA34]
 gi|89048122|gb|EAR53707.1| hypothetical amidase [Photobacterium sp. SKA34]
          Length = 569

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 80/317 (25%), Positives = 137/317 (43%), Gaps = 13/317 (4%)

Query: 118 LIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L   G L             +     +  A++ F+  +GL   G++    +  +  P   
Sbjct: 231 LWNLGYLTQPQYQQIVAQAKITNSGVINQAIQAFEGNYGLKMDGIIGPDVMRQLTRPYSS 290

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
             R   +NL R +    +  G + ++VNIP   +   +N K    S +I G   R T + 
Sbjct: 291 LARIAALNLQRERFAQLEGDGPQ-IIVNIPDYKMTLYDNQKPIFESKIIDGIPKRPTNLF 349

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG--KEVFVEEVDWN 289
            S IN ++ NPYW +P +I  ++ +   + +P +L +N + +I+       V    +DW 
Sbjct: 350 QSYINTVVINPYWYVPETIKVQNTIPSAKANPNFLANNRMDVINSWSDRSVVPPSSIDWA 409

Query: 290 SPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI--LFNNVVRFETSGCVR 345
           +  P  F   FRQDPG  NA+           + YMHD  +    LF    R  +SGC+R
Sbjct: 410 TVNPKTFSHEFRQDPGPENALGRVAFLMPDSFSVYMHDESQSEYPLFKRRHRDLSSGCMR 469

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V+    +   +L      +   + +++ T K   + L T V +   Y++AW  ++  +  
Sbjct: 470 VQQPRKMATLILSYQNMPTLPSVNDMINTNKHREIGLNTHVNLDVAYLTAWVTQNGQLAM 529

Query: 406 RDDIYGLDNVHVGIIPL 422
           R DIYG DN    +I  
Sbjct: 530 RPDIYGYDNPGAKLIQN 546


>gi|319957191|ref|YP_004168454.1| erfk/ybis/ycfs/ynhg family protein [Nitratifractor salsuginis DSM
           16511]
 gi|319419595|gb|ADV46705.1| ErfK/YbiS/YcfS/YnhG family protein [Nitratifractor salsuginis DSM
           16511]
          Length = 423

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVENGKVGLRSTVI 220
                +    R R+++++L R K +         Y LVNIP   +   ENG++   S V+
Sbjct: 152 WHGGGLSEAQR-RKVRLSLERSKLMDPDPTHWQTYFLVNIPEFRVRFFENGRLAFVSDVV 210

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---K 277
           VG+   QTPI  + +  ++ NP W +P +I + + +  L +DP Y K   + ++      
Sbjct: 211 VGKKSWQTPIFSAAMKYVVLNPTWNVPDNIARAEEIPHLLRDPNYFKHKRMIVLRSYDLD 270

Query: 278 GKEVFVEEVDWNSPEPP-------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
              V    V W     P        +   Q P K NA+   K  F + N+ YMHDTP   
Sbjct: 271 TTPVNPRSVPWRKYLRPEWKKKDLPYKLIQLPAKGNALGRVKFLFPNGNSVYMHDTPAKS 330

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKD---TPTWSRYHIEEVVKTRKTTPVKLATEVP 387
           LF   +R  + GC+R+   I++  +L +    +  W+   +EE +K+ K   V L   +P
Sbjct: 331 LFKRKIRAYSHGCIRLARPIEMLRYLAQHGYLSKDWT--QVEEELKSWKRHNVSLKEPIP 388

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           VH  Y +A+  +   +QF  DIYG D + 
Sbjct: 389 VHVGYFTAYVSQGGGVQFFPDIYGYDQIM 417


>gi|296445064|ref|ZP_06887025.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296257485|gb|EFH04551.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 518

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 20/249 (8%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            ++  N+ R + +  + +G   + VNIP   L  + +G+V  R+ VIVG+    TP+  +
Sbjct: 288 AEIIANMERWRWMP-RDLGENRIEVNIPDFELAVIRDGEVTHRARVIVGKEGTPTPVFSN 346

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            +  I+ NPYW +P SI+ K+M+     D Q +      ++   G               
Sbjct: 347 AMQFIIVNPYWNVPPSILNKEMLPKFGGDLQAIAARGYEVVYRNGHA------------- 393

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                RQ PG+ NA+   K  F +  + Y+HDTP   LF +  R  + GCVRV       
Sbjct: 394 ---RVRQRPGEGNALGRIKFMFPNDFSVYLHDTPSRALFASTHRAFSHGCVRVDQPFRFA 450

Query: 354 VWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +L     W    ++ ++   +   + LA  +P+H  Y +A+  +   +Q R D+YG  
Sbjct: 451 EAVLG--SGWREERVKRLI-GDQERYINLARPLPIHIEYFTAYVDESGRLQLRGDLYGYS 507

Query: 414 NVHVGIIPL 422
                 + L
Sbjct: 508 AKVRAALGL 516


>gi|255623270|ref|XP_002540350.1| conserved hypothetical protein [Ricinus communis]
 gi|223496506|gb|EEF22033.1| conserved hypothetical protein [Ricinus communis]
          Length = 249

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 80  KAIAFYQDILSRGGWPELPIRP-LHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           K +  Y+D+ ++GGW  +P  P L LG+     + +L  RL I  D   +   +  FD  
Sbjct: 1   KGLVVYRDLAAKGGWALIPEGPPLKLGDKGDPRITQLEARLAIE-DPTIAVDKAPVFDEA 59

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           ++ A+   Q R GL+P G++   TL A+NVPV LRI Q+  N+ R + L E+    R + 
Sbjct: 60  LQQALMRAQKRFGLNPDGVLGKGTLAALNVPVQLRIDQIVANMERWRWLPEELPADR-IQ 118

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNI AA +    +    L    + GR   +TP+L S+I+ I+ NP W +P SI  K++  
Sbjct: 119 VNIAAAVMSVFHHDAPTLTMRAVTGRPGDETPMLQSQIHSIVLNPPWNVPSSIATKELWP 178

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R +P YL  N+  +I  +G                    +Q  G   A+   K +F +
Sbjct: 179 KERANPGYLARNDFIVIPTEG---------------GGTRLQQKAGDKAALGLVKFDFNN 223

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGC 343
               Y+HDTP    F +  R  + GC
Sbjct: 224 PYGVYLHDTPSRAKFASYSRLASHGC 249


>gi|300024880|ref|YP_003757491.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526701|gb|ADJ25170.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 557

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/272 (25%), Positives = 130/272 (47%), Gaps = 11/272 (4%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +G +      A   P   R+R    N+   + +    MG  YVL NIP       ++
Sbjct: 238 LPANGNL------AKLSPAAKRLR---ANMEMWRWMWP-DMGDFYVLNNIPEFMQYVYKD 287

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G++   + ++ G VD+++ I    +  ++  P W +P SI+  ++   L +    ++   
Sbjct: 288 GEIIRSAKIVAGEVDKKSTIFSRPLKYVVLRPAWRVPESIMVNELWPSLIRGGGLMRQYG 347

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
           + +  + G+ V   + DW+S +  NFI  Q PG  + +   K  F S++  +MHDTP+  
Sbjct: 348 LQLQTKDGRRVDWRQYDWSSTDIRNFIVLQPPGPKSVLGRVKFSFPSQHTIFMHDTPDKW 407

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-TTPVKLATEVPVH 389
           +F    R  + GC+RV+N + L   +LK+   W    I E+ ++      V ++ E+P+H
Sbjct: 408 MFRPAQRTLSHGCLRVQNPMQLAEMVLKEDKGWDAAKIAELDRSGPLNNEVPISKEIPIH 467

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            VY +AW   D  ++  +D+YG +      + 
Sbjct: 468 LVYFTAWVTDDGKLKTFNDVYGHEKRVTLALD 499


>gi|256423860|ref|YP_003124513.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
 gi|256038768|gb|ACU62312.1| ErfK/YbiS/YcfS/YnhG family protein [Chitinophaga pinensis DSM 2588]
          Length = 478

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 83/346 (23%), Positives = 154/346 (44%), Gaps = 9/346 (2%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S       +  IAFY D L R  +  +    +    +  S   L ++L   G LD     
Sbjct: 136 SAPQYNALKSMIAFYNDRLQRQDYHPV---KITSETADSSNHPLIDKLYQLGFLD--APD 190

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
             A +  +   ++  +        G +    +E +NV ++ R+ +L+  +   + L   +
Sbjct: 191 YTAHEDTLRIKIRAAEYMFEFLEDGALRQGVIEELNVSLEKRLSELKHAINTFRWLNCLR 250

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                V+V+IPAA L         L S VIVG+    +  L SRI+ ++  PYW +P +I
Sbjct: 251 KYQYVVVVDIPAAELFVYLGDSTMLNSRVIVGKAKTPSSPLASRIDEVILFPYWTVPHNI 310

Query: 251 IQKDMMALLRQDPQ-YLKDNNIHMIDEKGKEVFVEEVDWNSPE--PPNFIFRQDPGKINA 307
             K+++  ++  P  YL+  N  ++D+ G+ +  + ++WN+       +  RQ  G  N+
Sbjct: 311 AVKELLPGIKGAPSIYLEAGNYQVLDKSGRILDPQSINWNTLNKHNFPYTLRQMFGCDNS 370

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL-KDTPTWSRY 366
           +   K+ F++  +TY+HDTP    F    R+ + GC+RV + I L   L+  + P     
Sbjct: 371 LGIIKLNFFNPYSTYLHDTPARSYFMFNSRYFSHGCIRVEDAIPLAKLLVPAEAPRIDSL 430

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              +         + +   +PV  +Y  AW   +  ++F +D+Y  
Sbjct: 431 SRMKTPPAGSPITIPMKPGIPVIILYEVAWPDANGKVRFFEDVYEK 476


>gi|237721416|ref|ZP_04551897.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449212|gb|EEO55003.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 518

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 246 DRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 305

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 306 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYA 365

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 366 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 425

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 426 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 485

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 486 VYLSADNNLRYCEDIYKYDPSLLEAMNNLNLKP 518


>gi|293370854|ref|ZP_06617399.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
 gi|292634070|gb|EFF52614.1| conserved domain protein [Bacteroides ovatus SD CMC 3f]
          Length = 513

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 241 DRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 300

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 301 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGFQVDPHSIKWAKYA 360

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 361 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 420

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 421 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 480

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 481 VYLSADNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|260171549|ref|ZP_05757961.1| ErfK/YbiS/YcfS/YnhG family protein [Bacteroides sp. D2]
          Length = 518

 Score =  239 bits (609), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 246 DRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 305

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 306 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYA 365

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 366 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 425

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 426 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 485

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 486 VYLSTDNNLRYCEDIYKYDPSLLEAMNNLNLKP 518


>gi|160887148|ref|ZP_02068151.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
 gi|156107559|gb|EDO09304.1| hypothetical protein BACOVA_05164 [Bacteroides ovatus ATCC 8483]
          Length = 513

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 241 DRLLVNMERARWQYALDKGQKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 300

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 301 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYA 360

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 361 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 420

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 421 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 480

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 481 VYLSADNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|315919863|ref|ZP_07916103.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693738|gb|EFS30573.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 513

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 241 DRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 300

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 301 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYA 360

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 361 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 420

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 421 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 480

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 481 VYLSTDNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|299148640|ref|ZP_07041702.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
 gi|298513401|gb|EFI37288.1| putative periplasmic protein [Bacteroides sp. 3_1_23]
          Length = 513

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 19/273 (6%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILH 232
            +L VN+ R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L 
Sbjct: 241 DRLLVNMERARWQYALDKGRKYVIANVAAFMLQAVNEETDSILEMRICVGTVKNKTPLLS 300

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW--NS 290
           SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   +
Sbjct: 301 SRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVDPHSIKWAKYA 360

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +
Sbjct: 361 GSGVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKAL 420

Query: 351 DLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYIS 394
           D   +LLK+        I   +                  R+     L   +P+   Y +
Sbjct: 421 DFAFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQT 480

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
            +   D+ +++ +DIY  D   +  +      P
Sbjct: 481 VYLSTDNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|152992423|ref|YP_001358144.1| hypothetical protein SUN_0829 [Sulfurovum sp. NBC37-1]
 gi|151424284|dbj|BAF71787.1| hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 405

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 11/265 (4%)

Query: 162 LEAMNVPVD---LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +A+          +R++++++ RIK L++  +G  YVLVNIP   +  +EN K  +   
Sbjct: 138 YKALQRTPGASPQALRKVRMSIERIK-LMKPGLGKTYVLVNIPEFRVRVIENDKTSIAMG 196

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM---ID 275
           VI G+ D QTPI    +  I+ NP W +P SI + +++  L +DP YLK + + M    +
Sbjct: 197 VITGKKDHQTPIFSENLQYIVLNPTWNVPDSIARNEVIPKLLKDPGYLKKHRLVMRRDYN 256

Query: 276 EKGKEVFVEEVDWNSPEPP----NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                +    V+  + +       F F + P   NA+   K  F + ++ YMHDTP   L
Sbjct: 257 LDSPALSPGSVNLRAYKGGKGDVPFKFIEVPSDKNALGRVKFIFPNHHSVYMHDTPTKYL 316

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV 391
           F   VR  + GCVR++N   +  +L +    +S     E   + KT  +K+   +PVH  
Sbjct: 317 FKRNVRAYSHGCVRLQNPKLMLKYLTEHYTNYSFEEAMEKYNSYKTQYMKIIKPLPVHTA 376

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVH 416
           Y++A+  +D  ++   DIYGLD + 
Sbjct: 377 YLTAYVEEDGTLKVFPDIYGLDAMQ 401


>gi|323137795|ref|ZP_08072871.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397092|gb|EFX99617.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 495

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 79/406 (19%), Positives = 130/406 (32%), Gaps = 77/406 (18%)

Query: 19  ILPMGLSLVEKPIHASVLDEII-NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           I+          +  + +  +I      +  ++  D          D + P         
Sbjct: 161 IVDYAAQASGARVDPARISRLIGARPRLASASEALDAVTLAGADLADFNPP---HAGYRA 217

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
               +A  + I    G                     R  L   G               
Sbjct: 218 LRDKLAELRTIRENSG---------------------RVALASRG--------------- 241

Query: 138 VESAVKLFQMRHGLDPSGMVDSS-TLEAMNVPVDLRIR-QLQVNLMRIKKLLEQKMGLRY 195
                              +    +  ++      RI  ++  N+ R +    + +G   
Sbjct: 242 -----------------NDIGPQNSFASLTQGEAKRIEAEIIANMERWRWEP-RDLGATR 283

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP   L    +G    R+ V+VG+    TP+    +  ++ NP W +P+SII K+M
Sbjct: 284 IEVNIPQFELALTRDGVKTHRTRVVVGKTSTPTPVFSDTMRYVVINPSWSVPQSIITKEM 343

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                 D  YL      +    G+                   RQ PG+ NA+   K  F
Sbjct: 344 AGKHGGDLSYLAARGFKVSYSNGRA----------------SVRQPPGEKNALGRVKFVF 387

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +  + Y+HDTP   LF    R  + GCVRV     L   +L     W+   +  +V   
Sbjct: 388 PNEFSVYLHDTPSRSLFATARRAYSHGCVRVDQPFALAEAVLTADAGWTEKRLRGMV-GA 446

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
               + LA  +PVH  Y +A    D  ++  DDIYG        + 
Sbjct: 447 SERRIDLARPMPVHIEYFTATVDADGQLRLFDDIYGYSARVREALA 492


>gi|295086942|emb|CBK68465.1| Uncharacterized protein conserved in bacteria [Bacteroides
           xylanisolvens XB1A]
          Length = 513

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SR
Sbjct: 243 LLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSR 302

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W      
Sbjct: 303 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGK 362

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D 
Sbjct: 363 GVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDF 422

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 423 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVY 482

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +DIY  D   +  +      P
Sbjct: 483 LSADNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|298481479|ref|ZP_06999671.1| periplasmic protein [Bacteroides sp. D22]
 gi|298272343|gb|EFI13912.1| periplasmic protein [Bacteroides sp. D22]
          Length = 513

 Score =  238 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SR
Sbjct: 243 LLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSR 302

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W      
Sbjct: 303 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGK 362

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D 
Sbjct: 363 GVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDF 422

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 423 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVY 482

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +DIY  D   +  +      P
Sbjct: 483 LSADNNLRYCEDIYKYDPSLLEAMNNLNLKP 513


>gi|153807673|ref|ZP_01960341.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
 gi|149130035|gb|EDM21247.1| hypothetical protein BACCAC_01955 [Bacteroides caccae ATCC 43185]
          Length = 514

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +     + G +YV+ N  A  L+AV E     L   + VG V  +TP+L S+
Sbjct: 244 LLVNMERARWQYALEKGKKYVVANTAAFMLQAVNEETDSILEMRICVGSVKNRTPLLSSK 303

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W      
Sbjct: 304 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSIKWAKYAGK 363

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F +  + Y+HDTP    F+   R  + GCVR++  +D 
Sbjct: 364 GVPYTVKQDNKAGNSLGRIIFRFPNPYSVYLHDTPSKWAFSRKNRAVSHGCVRLQKALDF 423

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 424 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPISAAYRELKHYSLEQYIPLFIDYQTVY 483

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +DIY  D   +  +      P
Sbjct: 484 LSADNNMRYCEDIYNYDPSLLEAMKSLNLKP 514


>gi|326798188|ref|YP_004316007.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
 gi|326548952|gb|ADZ77337.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobacterium sp. 21]
          Length = 487

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 80/326 (24%), Positives = 147/326 (45%), Gaps = 16/326 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDS 159
            L  G ++      R        +  S+  SV+FD  +    +K + +      SG   +
Sbjct: 171 ALEYGMTNPRKVLPRY------YIPVSRPDSVSFDRVLSVENLKHY-LDSIQPKSGAYRA 223

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
                +N     +   L  N+ R++   +       + VNIPA  L  + +     +  V
Sbjct: 224 MQKALINENHGAKKIALIANMERLRWKYKMDSTHL-IYVNIPAYQLYIIRDRSTKGQMKV 282

Query: 220 IVGRVD-RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +VG+ D  +TP+L S+I+ +  NP W IP SI +K+++   + D  YL ++ + +     
Sbjct: 283 VVGKADGHETPMLASKIHSVQVNPIWNIPTSIAKKEILVQAKADKYYLANHGMDVYRRGV 342

Query: 279 KEVFVEEVDWNSPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
           K    + +DW+     N    F+Q PG  N++   K  F + ++ Y+HDTP   +F+  +
Sbjct: 343 KIANPDTIDWSVYNEENLPYSFKQQPGNTNSLGLIKFLFKNGSSVYLHDTPAKAVFSRSM 402

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT--TPVKLATEVPVHFVYIS 394
           R  + GCVRV   +DL   L  +   +    I+E + + +     + L  +VPV   Y++
Sbjct: 403 RAASHGCVRVEKPLDLARALFGEGEKYDL--IKEEMSSEEPVAKTIGLKPQVPVVLDYVT 460

Query: 395 AWSPKDSIIQFRDDIYGLDNVHVGII 420
                 S ++F  D+Y LD++    +
Sbjct: 461 CKMDSSSTLKFYPDVYKLDSLLYRSL 486


>gi|294646674|ref|ZP_06724299.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294807105|ref|ZP_06765923.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
 gi|292637962|gb|EFF56355.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|294445671|gb|EFG14320.1| conserved domain protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 521

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SR
Sbjct: 251 LLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSR 310

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W      
Sbjct: 311 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGK 370

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D 
Sbjct: 371 GVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDF 430

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 431 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVY 490

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +D Y  D+  +  +      P
Sbjct: 491 LSADNNLRYCEDTYKYDSSLLEAMNNLNLKP 521


>gi|237715634|ref|ZP_04546115.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229444343|gb|EEO50134.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 518

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SR
Sbjct: 248 LLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSR 307

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W      
Sbjct: 308 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGK 367

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D 
Sbjct: 368 GVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDF 427

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 428 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVY 487

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +D Y  D+  +  +      P
Sbjct: 488 LSADNNLRYCEDTYKYDSSLLEAMNNLNLKP 518


>gi|262408643|ref|ZP_06085189.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262353508|gb|EEZ02602.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 513

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 19/271 (7%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           L VN+ R +       G +YV+ N+ A  L+A+ E     L   + VG V  +TP+L SR
Sbjct: 243 LLVNMERARWQYALDKGQKYVIANVAAFMLQAINEETDSILEMRICVGSVKNKTPLLSSR 302

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V   +V+W      
Sbjct: 303 IYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGLQVNPHQVNWAKYAGK 362

Query: 295 --NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +  +QD    N++      F + ++ Y+HDTP    F    R  + GCVR++  +D 
Sbjct: 363 GVPYTVKQDNKTGNSLGRIIFRFPNPHSVYLHDTPSRWAFTRNNRAVSHGCVRLQKALDF 422

Query: 353 DVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYISAW 396
             +LLK+        I   +                  R+     L   +P+   Y + +
Sbjct: 423 AFFLLKEPDELLEDRIRIAMDIKPVSEEGKKLPVSAAYRELKHYSLEKYIPLFIDYQTVY 482

Query: 397 SPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
              D+ +++ +D Y  D+  +  +      P
Sbjct: 483 LSADNNLRYCEDTYKYDSSLLEAMNNLNLKP 513


>gi|300778249|ref|ZP_07088107.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300503759|gb|EFK34899.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 468

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 7/250 (2%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           +  I+++ +N+ R++ +        Y+LVNIPA SL+ V+  K  L   VIVG+    +P
Sbjct: 215 EAEIKKVAINMERLRWM--GISSDAYLLVNIPAYSLDFVQKDKT-LHYKVIVGKPSTPSP 271

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +L SR++     P W +P++I  K+M+  + ++ QYL++++  + D  GK V V      
Sbjct: 272 VLKSRVDYFTTAPDWKVPQNIFIKEMLPKIIKNSQYLEEHHYSLYDRSGKIVPVTSAKLK 331

Query: 290 SPEPPNFI--FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                 +    RQ  G  NA+ +    F +    Y+HDT +  LF    R  + GC+RV 
Sbjct: 332 QAYRKPYQYSIRQSSGCDNALGAVVFRFSNSYGVYLHDTSQKQLFEKTQRALSHGCIRVE 391

Query: 348 NIIDLDVWLLKDTPTWSR-YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           N  DL   LLK   T      ++  +   +     L   VP+   Y++    K+  + F 
Sbjct: 392 NAGDLAAQLLKHDGTEDEIPLMKSFMDRYERKDFVLKQPVPIMITYLTCLV-KNGKMVFY 450

Query: 407 DDIYGLDNVH 416
           +DIY LD V 
Sbjct: 451 NDIYNLDPVL 460


>gi|312115661|ref|YP_004013257.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220790|gb|ADP72158.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 569

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 122/254 (48%), Gaps = 4/254 (1%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
               ++L  N+ + + +    +G  YV  NIP  +   V+NG+V  +  ++ G++D+QTP
Sbjct: 256 SAEAKRLLANMEQWRWMPA-DLGDLYVWNNIPEYTQRVVKNGEVVRKERIVTGQLDKQTP 314

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +    + +I F P W++P SI  ++++  L++    +++  + + D+ G+ V    ++W 
Sbjct: 315 VFTRTLKKITFKPTWIVPESIKVREILPSLQRGGGMMREWQLELRDKDGQTVDWRRINWY 374

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT--PEPILFNNVVRFETSGCVRVR 347
             +   F   Q  G  + M   K  F S++  +MHD   P+  +FN   R  + GC+RV+
Sbjct: 375 RTDIRIFNVVQPNGAKSVMGKVKFSFPSQHTVFMHDAYPPDKWMFNKARRTYSHGCMRVQ 434

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKT-TPVKLATEVPVHFVYISAWSPKDSIIQFR 406
           N I L   LLK+   +    + + V+T        +   +P+H  Y +A    D  +   
Sbjct: 435 NPIGLAEILLKEDKGFEAAQVRDAVRTGGNDNEFDIERRIPIHMTYFTALVGDDGKLHTF 494

Query: 407 DDIYGLDNVHVGII 420
            D+YG +      +
Sbjct: 495 PDVYGHERRITLAL 508


>gi|260642730|ref|ZP_05859514.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
 gi|260620827|gb|EEX43698.1| putative periplasmic protein [Bacteroides finegoldii DSM 17565]
          Length = 512

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 19/274 (6%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPIL 231
             +L +NL R +       G +YV+ N+ A  L+AV E     L   + VG V  +TP+L
Sbjct: 239 WDRLLLNLERARWQYALDKGKKYVVANVAAFMLQAVNEETDSILEMRICVGSVRNKTPLL 298

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            SRI  +  NPYW +P+SII+K+++   R+D  Y   N + + D+ G +V    + W   
Sbjct: 299 SSRIYYMELNPYWNVPQSIIRKEIIPTYRRDTTYFTRNRMKVYDKNGTQVDPHSIKWAKY 358

Query: 292 EPP--NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                 +  +QD    N++      F +  + Y+HDTP    F    R  + GCVR++  
Sbjct: 359 AGKGVPYTVKQDNKTGNSLGRIIFRFPNPYSVYLHDTPSRWAFMRKNRAVSHGCVRLQKA 418

Query: 350 IDLDVWLLKDTPTWSRYHIEEVV----------------KTRKTTPVKLATEVPVHFVYI 393
           +D   +LL++        I   +                  R+     L   VP+   Y 
Sbjct: 419 LDFAFFLLEEPDELLEDRIRIAMDLKPISEEGKKLPISAAYRELKHYSLEKYVPLFIDYQ 478

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPEDHP 427
           + +   D+ + + DDIY  D   +  +   +  P
Sbjct: 479 TVYLSADNNLMYCDDIYKYDPSLLKAMTDLDLKP 512


>gi|323136049|ref|ZP_08071132.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322399140|gb|EFY01659.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 537

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 81/407 (19%), Positives = 129/407 (31%), Gaps = 73/407 (17%)

Query: 21  PMGLSLVEKPIHASVLDEIINE----SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
              L      I    L  +I         +           R    + +  P        
Sbjct: 197 AYALQARGGRIQPGRLSRLIGAKTTLPDPAQAVAEVAAAGYRASETLQAFNPPH--YGYQ 254

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLG-NSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           Q  + +A      + G      +     G  +      L+ R                  
Sbjct: 255 QLREKLAELHSQRAAGLAGAERVASAEEGLQTDADPPPLKSR------------------ 296

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
                                       A          ++  N+ R + L  + +G   
Sbjct: 297 ----------------------KRRAASAGGGSTSALEAEIVANMERWRWLP-RDLGDER 333

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP   L  V  G V  R+ VIVG+    TPI    +  I+ NP W +P+SIIQK+ 
Sbjct: 334 IEVNIPDFELAVVRGGMVTHRTRVIVGKEQTPTPIFSDEMVEIIVNPSWYVPQSIIQKEW 393

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
              +             +    G+ V                 RQ PG+ NA+   K  F
Sbjct: 394 HGGVGA--------GYQVSYRNGQMV----------------VRQPPGEKNALGRIKFVF 429

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
            +    YMHDTP   LF    R  + GC+RV +   L   +L     WS   +++++   
Sbjct: 430 PNDFAVYMHDTPSRGLFAASHRAFSHGCMRVDDPFALAGAVLGPGSGWSEARVKKLI-GP 488

Query: 376 KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
               + L+  +PVH  Y +A+  +   +  R D+YG        + L
Sbjct: 489 SERYINLSKPLPVHIQYFTAYVDEGGRLVQRPDLYGYSARVRKALGL 535


>gi|262361436|gb|ACY58157.1| hypothetical protein YPD4_1249 [Yersinia pestis D106004]
          Length = 205

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 6/190 (3%)

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK---EVFVEEVD 287
           + S +N ++ NP W +P S++++D++   R D  Y + N   ++         +    +D
Sbjct: 1   MSSALNNVVVNPPWNVPTSLVRQDIVPKARNDAGYFQRNGYTVLSGWSNDAEVINPSMID 60

Query: 288 WN--SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           W+  SP    +  RQ PG  N++   K    S +  Y+HDTP   LF   +R  +SGCVR
Sbjct: 61  WSIISPNNFPYRLRQAPGANNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVR 120

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           V    DL   LL+D   W+   +   VK   TT V +   VPV   Y++AW  +D   QF
Sbjct: 121 VNKASDLANMLLQDA-GWNDARVSSKVKQGDTTYVNIRQRVPVQLYYLTAWVAEDGKPQF 179

Query: 406 RDDIYGLDNV 415
           R DIY  D +
Sbjct: 180 RTDIYNYDKM 189


>gi|262040976|ref|ZP_06014198.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041670|gb|EEW42719.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 466

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 93/184 (50%), Gaps = 5/184 (2%)

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK--EVFVEEVDWNSP 291
            +N ++ NP W +P ++ +KD++  +R +P YL+ +   ++        +    VDW++ 
Sbjct: 266 ALNNVVVNPPWNVPPTLARKDILPKVRNNPGYLEQHGYTVMRGWNSKETIDPYRVDWSTI 325

Query: 292 EPPNFIFR--QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
              N  FR  Q PG  N++   K    S +  Y+HDTP   LF   VR  +SGCVRV   
Sbjct: 326 TENNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTPNHNLFQKDVRALSSGCVRVNKA 385

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDI 409
            +L   LL+D   W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DI
Sbjct: 386 SELANMLLQDA-GWNDTRISDALKQGDTRYVNIRQNIPVNLYYLTAFVDADGRTQYRTDI 444

Query: 410 YGLD 413
           Y  D
Sbjct: 445 YNYD 448



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 28/100 (28%), Gaps = 6/100 (6%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S     +     S++N  +       +   I    P   +   
Sbjct: 172 YLHFISGIPTQGTRWLYSSTPYKMATPPLSVINQWQLALDNGSLPAFIAGLAPRHPQ--Y 229

Query: 76  AQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRL 114
               +++     +     WP++     L  G  S  +  L
Sbjct: 230 EAMHQSLLAL--VADSRPWPQMTGSGSLRPGEWSNDIGAL 267


>gi|332880541|ref|ZP_08448215.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332681529|gb|EGJ54452.1| conserved domain protein [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 508

 Score =  226 bits (576), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 79/340 (23%), Positives = 130/340 (38%), Gaps = 34/340 (10%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLF-QMRHGLDPSGMVDSSTLEAMNVPVDLR-- 172
            RL  + D          +D   ESA + F      L   G       +        R  
Sbjct: 169 NRLEQT-DTTQKAPFRRLYDIETESADQEFVHKALSLLKDGNFTDFFRDIQPDNPLYRQL 227

Query: 173 ------------IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTV 219
                        R+  VN+ R +         +YV VN+ AA+L AV+  K   L   +
Sbjct: 228 TDHYLQTQNPETRRKAIVNIERSRWRTPFAAHDKYVWVNLAAATLYAVDENKPEYLDMKI 287

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KG 278
            +G    +TP+L SRI R+  NPYW IP SI++K++      D  Y   N   + ++  G
Sbjct: 288 CIGSPKNKTPMLQSRIERVDMNPYWNIPYSIVKKEIAPRHAGDEAYFSRNRYRIFNKETG 347

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +E+    V  +      +  RQD G+ N++      F +  + Y+HDT     F    R 
Sbjct: 348 EELPPAAVTSDMLTSGRYRVRQDNGEGNSLGRLIFRFPNNFSIYLHDTNNRQAFKRTNRA 407

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV-------------KTRKTTPV---KL 382
            + GC+R+   ++L V+LL      +   + E +             K  +   V   + 
Sbjct: 408 ISHGCIRIEKPLELAVFLLNSPEEKTVNKLREAIGLPPLNSSVPIEKKEGEQLKVGIQRF 467

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              +PV   Y + +   D   +   D YG D + +  +  
Sbjct: 468 DPSIPVVIDYYTLYPKPDGGWEESPDPYGYDEILLKKLEA 507


>gi|289804603|ref|ZP_06535232.1| hypothetical protein Salmonellaentericaenterica_09007 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 443

 Score =  226 bits (576), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 85/347 (24%), Positives = 139/347 (40%), Gaps = 53/347 (15%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 103 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 160

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDP-------- 126
           A    A+     +     WP+L     L  G  S  V  LRE L  +G LD         
Sbjct: 161 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG 218

Query: 127 ---------------------------------SKGLSVAFDAYVESAVKLFQMRHGLDP 153
                                                + A+D  +  AVK FQ   GL  
Sbjct: 219 DNTSDSAVVSPSAVVDETSVAQPVDEPTARRSKPAPAARAYDRELVEAVKRFQAWQGLGA 278

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G++  +T   +N+    R   L +N+ R++ L  +      ++VNIPA SL   +NG  
Sbjct: 279 DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAEL--STGIMVNIPAYSLVYYQNGNQ 336

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            L S VIVGR DR+TP++ S +N ++ NP W +P ++ +KD++  +  DP YL+ +   +
Sbjct: 337 VLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTV 396

Query: 274 IDEKGKE--VFVEEVDWNSPEPPNFIFR--QDPGKINAMASTKIEFY 316
           +     +  +   +VDW +  P N  FR  Q PG  N++   K    
Sbjct: 397 MRGWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMP 443


>gi|190149392|ref|YP_001967917.1| hypothetical protein APP7_0123 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189914523|gb|ACE60775.1| Uncharacterized protein [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 213

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 64/198 (32%), Positives = 107/198 (54%), Gaps = 5/198 (2%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +IVGR DR+TP+++S+++ ++ NP W IP +I+ KD++  L ++P +       + D KG
Sbjct: 1   MIVGRDDRRTPVMYSKLSNVVVNPPWNIPPTILNKDIVPKLAKNPGFADAAGYEIFDGKG 60

Query: 279 KEVFVEEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            ++    V+W      +   +  RQ  G  +A+   K    S +  Y+HDTP   LF   
Sbjct: 61  NKINPRSVNWAQYVNSKNLPYRIRQKAGDDSALGRFKFNMPSSDAIYLHDTPNRGLFGKT 120

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
            R  +SGCVRV    DL   LLK+   WS    ++V+ ++KTT   + ++ PV+  Y++A
Sbjct: 121 DRALSSGCVRVERSDDLASILLKEA-GWSMDKKQKVLASQKTTSANIRSDNPVYLYYVTA 179

Query: 396 WSPKDSIIQFRDDIYGLD 413
           W  ++  +    DIY  D
Sbjct: 180 WV-ENGKVYTLPDIYKFD 196


>gi|255533072|ref|YP_003093444.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
 gi|255346056|gb|ACU05382.1| ErfK/YbiS/YcfS/YnhG family protein [Pedobacter heparinus DSM 2366]
          Length = 512

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/296 (25%), Positives = 120/296 (40%), Gaps = 51/296 (17%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------- 224
           + + VN+ R++  L   +G  +V VNIP  +L             V VG           
Sbjct: 215 KTVMVNMERLRWKLP-DLGEEHVEVNIPDFTLTWFSGQDTLSHMKVCVGGAREKDYAEKI 273

Query: 225 --------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
                         + +TPIL+S++N I  NP W IP SI + ++     +DP YL +NN
Sbjct: 274 KLYLKSGNLDDKPKNHETPILYSKLNSIQVNPIWNIPVSIARSEIYWQAIRDPYYLSNNN 333

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           I +  +       + + WN        F  +Q  G+ NA+   K  F + ++ Y+HDT  
Sbjct: 334 IKVYYKGQLVTDPDTIQWNKYPREKLPFQFKQGSGEGNALGKFKFIFDNGSSIYLHDTNN 393

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE---------------EVVK 373
              F    R  + GCVRV   ++    L+KD   + +  +E               + + 
Sbjct: 394 KSAFARNNRAISHGCVRVEKPLEFAEMLVKDKYQYDQLRMEVNLPPVDTTKMELYRKKLA 453

Query: 374 TR---------KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
            +         K         VP+   YI+AWS  +  IQFR D+YGLD      +
Sbjct: 454 KKADTLNIFQLKPKWFGTKKPVPLIINYITAWSQ-NGTIQFRPDVYGLDETLYAAM 508


>gi|330996788|ref|ZP_08320660.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
 gi|329572510|gb|EGG54161.1| conserved domain protein [Paraprevotella xylaniphila YIT 11841]
          Length = 508

 Score =  223 bits (568), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 75/340 (22%), Positives = 128/340 (37%), Gaps = 34/340 (10%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLF-QMRHGLDPSGMVDSSTLEAMNVPV----- 169
            RL  + D          +D   ESA + F      +   G       +           
Sbjct: 169 NRLEQT-DTTKKAPFRRLYDTETESANQEFIHKALSILKDGNFTDFFRDIQPDNPLYYQL 227

Query: 170 ---------DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTV 219
                        R+  +N+ R +    +    +YV VN+ AA L AV+  K   L   +
Sbjct: 228 TNLCLQTQNPETRRKAIINIERSRWRTPRAAHDKYVWVNLAAAKLYAVDEKKPEYLDMKI 287

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KG 278
            +G    +TP+L SRI R+  NPYW IP SI++K++      +  Y   N   +  +  G
Sbjct: 288 CIGSPKSKTPMLQSRIERVDMNPYWNIPYSIVKKEIAPRHAGNEAYFSRNRYRIFSKETG 347

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +E+    V  +      +  RQD G+ N++      F +  + Y+HDT     F    R 
Sbjct: 348 EELPPAAVTADMLTSGRYRVRQDNGEGNSLGRLIFRFPNNFSIYLHDTNNKQAFKRTNRA 407

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV-------------KTRKTTPV---KL 382
            + GC+R+   ++L V+LL      +   + E +             K  +   V   + 
Sbjct: 408 ISHGCIRIEKPLELAVFLLDTPEEKTVNRLREAIGLPPLNSSIPIEKKEGEPLKVGIQRF 467

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
              +PV   Y + +   D   +   D YG D + +  +  
Sbjct: 468 DPSIPVVIDYYTLYPKPDGGWEESPDPYGYDEILLKKLEA 507


>gi|85374905|ref|YP_458967.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
 gi|84787988|gb|ABC64170.1| hypothetical protein ELI_10390 [Erythrobacter litoralis HTCC2594]
          Length = 473

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 57/257 (22%), Positives = 108/257 (42%), Gaps = 18/257 (7%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-T 228
             R + ++ N+ R + L  + +G +Y++ N+P   L    N K+      IVG+  R  T
Sbjct: 209 SERFKLIRANMDRWRWLP-RDLGGQYLMTNVPEYQLRLTVNDKIVRTYKTIVGKPGRTAT 267

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           P L   +  ++ NP W +P+SI++ + + A +  +P + +             V      
Sbjct: 268 PQLAEVVEGVILNPTWTVPQSIVKGEGLGAKVLNNPGWARAKGYKATKGANGWVT----- 322

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                       Q PG  N++   K++  +R+  ++HDTP   LF    R  + GC+R  
Sbjct: 323 ----------VVQQPGPTNSLGRMKLDMPNRHAIFLHDTPSRNLFGTSNRALSHGCIRTE 372

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L + L       +     E++ + + T V    ++PV+  Y +  +  D  +    
Sbjct: 373 RATELALTLSILQAGLTADEGVELLNSGEYTRVGFEKKMPVYITYFTMATDIDGKLSTFK 432

Query: 408 DIYGLDNVHVGIIPLPE 424
           D+YG D+        P 
Sbjct: 433 DLYGRDDAVKAAFDAPR 449


>gi|284036319|ref|YP_003386249.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283815612|gb|ADB37450.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 403

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 9/258 (3%)

Query: 159 SSTLEAMNVPVD--LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGL 215
               +A +        +R ++  L   + +       ++VLVNIPA  L   +  GK  L
Sbjct: 145 KRLRKASHTNPAMADSLRLIRQTLNFYRYINRFD-PDQFVLVNIPAGELNVFDRTGKRLL 203

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              VI G+ D+ TP + + I  I+  PYW +P++I   +M+  +++D  Y+ + N+ ++D
Sbjct: 204 PMQVISGKPDKMTPCMVTYIQDIVMYPYWNVPQNIALDEMLPRMKRDLSYIYNQNLQILD 263

Query: 276 EKGKEVFVEEVDWNSP--EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            K KEV  EE+DW S       +  RQ  G  N++   K    +    Y+HDT    LF 
Sbjct: 264 AKNKEVDPEEIDWESLSETNFPYRVRQASGCENSLGLLKFNLANPLAIYLHDTNSRDLFK 323

Query: 334 NVV-RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           +    + + GCVRV+  ++L   +L    T+    + + +  +K   +    + PV   Y
Sbjct: 324 STKDHWRSHGCVRVQKPVELANLIL-GAKTFDADFMNKCLIDQKPKTLP-TKKFPVFITY 381

Query: 393 ISAWSPKDSIIQFRDDIY 410
             A       + F +D+Y
Sbjct: 382 NIADVDAAGKLHFYNDVY 399


>gi|85709388|ref|ZP_01040453.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
 gi|85688098|gb|EAQ28102.1| hypothetical protein NAP1_10923 [Erythrobacter sp. NAP1]
          Length = 460

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 21/271 (7%)

Query: 159 SSTLEAMNVPVDLRIRQ---LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +   E + V       +   +Q N+ R + L  + +G +Y++ N+P   L      ++  
Sbjct: 183 ARLREELAVTPAEEAEKRKLIQANMDRWRWL-ARDLGTQYLITNVPEYQLRLTVRDRIIS 241

Query: 216 RSTVIVGRVDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHM 273
               +VG+  R  TP L   +  ++FNP W +P+SI++ + +   +  +P + + N    
Sbjct: 242 TYRTVVGKPGRTATPQLAEMVEGVVFNPTWTVPQSIVKGEGLGERVLGNPGWARANGYTA 301

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                  +                  Q PG  N++   K+E  + +  + HDTP   LF 
Sbjct: 302 TRGSNGWIT---------------VVQQPGPGNSLGRMKLEMPNPHAIFFHDTPSRHLFA 346

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYI 393
           N  R  + GC+R    ++L + +       +R    E+  + K T V +  ++P +  Y 
Sbjct: 347 NANRALSHGCIRTERALELAITMAILGKGATRDEAVEIATSGKYTKVMIEKQLPAYITYF 406

Query: 394 SAWSPKDSIIQFRDDIYGLDNVHVGIIPLPE 424
           +     +  ++  DDIYG D   +  +  P 
Sbjct: 407 TMGVDIEGELRTFDDIYGRDAPVLASLDKPR 437


>gi|296283068|ref|ZP_06861066.1| hypothetical protein CbatJ_05580 [Citromicrobium bathyomarinum
           JL354]
          Length = 468

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 18/264 (6%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A   P   R + +Q N+ R + L  + +G +Y++ N+P   L    N K+      IVG+
Sbjct: 199 AKAKPGSKRYKLIQANMDRWRWLP-RDLGHQYLITNVPEYQLRLTVNDKIMRTYRTIVGK 257

Query: 224 VDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEV 281
             R  TP L   +  ++ NP W +P+SI++ + +   +  +P +               +
Sbjct: 258 PGRTATPQLAESVEGVILNPNWTVPQSIVKGEGLGERVLGNPSWAASKGYKATRGANGYI 317

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                             Q PG  NA+   K++  +R+  + HDTP   LF+   R  + 
Sbjct: 318 S---------------VVQGPGPGNALGRMKLDMPNRHAIFFHDTPSRGLFSQADRALSH 362

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R     +L + L       +     E + + + T V+  +++P +  Y +  +  D 
Sbjct: 363 GCIRTERATELALTLAILQAGLTADEGVEKLASGEYTRVEFNSKMPAYITYFTMGTTIDG 422

Query: 402 IIQFRDDIYGLDNVHVGIIPLPED 425
            +    DIY  D   +     P  
Sbjct: 423 EMATFKDIYDRDAPVLAAFEAPRK 446


>gi|149275869|ref|ZP_01882014.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
 gi|149233297|gb|EDM38671.1| hypothetical protein PBAL39_21400 [Pedobacter sp. BAL39]
          Length = 532

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 51/335 (15%)

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
            +   ++  Q   G   +   + + L+A  +      R + +N+ R++  L   MG  YV
Sbjct: 198 DLAKLLRDIQPSSGQYLALQKELAALKAGGLGSSASARTILINMERLRWKLP-DMGNEYV 256

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRV-----------------------DRQTPILHS 233
            VNIP  SL             V VG                         + +TPIL+S
Sbjct: 257 EVNIPDFSLTWFNKQDTVSHMKVCVGGAREANYKEKIATYLKTKSLDDKPKNHETPILYS 316

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           ++N I  NP W IP SI + ++  + R+DP YL +NNI++  +       + + WN    
Sbjct: 317 KLNSIQVNPIWNIPVSIARSEIYWMARKDPFYLSNNNINVYYKGKLVNDPDTIQWNKYPR 376

Query: 294 PNFIF--RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               F  +Q  G  NA+   K  F + ++ Y+HDT     F    R  + GCVRV   ++
Sbjct: 377 EKLPFQFKQGSGGGNALGKFKFIFDNGSSIYLHDTNNKTAFGRANRAISHGCVRVERPLE 436

Query: 352 LDVWLLKDTPTWSRYHIE---------------EVVKTR---------KTTPVKLATEVP 387
               L+     + +  +E               + +  +         K         VP
Sbjct: 437 FAEKLVGSKYQYDQLRMEVNLPPLDTTKMNVYRKKLAQKADTLNAFQLKPKWFGTKKPVP 496

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           +   Y++AWS  +  I+FR D+Y LD      +  
Sbjct: 497 LIINYVTAWSQ-NGKIEFRPDVYRLDETLWTAMQK 530


>gi|288928347|ref|ZP_06422194.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288331181|gb|EFC69765.1| lipoprotein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 460

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 27/310 (8%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM- 191
            ++  V+  ++  Q ++ L     +     +  ++    RIR L  N+ R +        
Sbjct: 153 VYNDSVDIFLRQAQPQNAL---YALLIKHFKGKDLSETDRIRLL-CNVERSRWRQTDYPQ 208

Query: 192 -GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
              +YVLVN+P+  L+A+E   V L   +  G +D +TP+L+S I R+  NP W+IPRSI
Sbjct: 209 NHRKYVLVNVPSYHLDAIEGDSV-LTMRMACGTLDTKTPLLNSHIMRMDVNPQWIIPRSI 267

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I+K+++     +P Y + +   +++   G+ V    V       P++   Q+ G+ N++ 
Sbjct: 268 IKKEVVGH-AGNPDYFERHRYFILNRPSGRRVDPANVSAGMLLNPDYFVIQEGGEGNSLG 326

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
                F +  + ++HDT     F+   R  + GC+RV+   +L V+LL          I 
Sbjct: 327 RVVFRFNNNFSIFIHDTSSKWAFDRGSRSVSHGCIRVQKPFELAVFLLGKKDKTLIDKIN 386

Query: 370 EVV-------KTRKTTP-----------VKLATEVPVHFVYISAWSPKDSIIQFRDDIYG 411
             +       K  +              VK+   VP+   Y + +      +    D+YG
Sbjct: 387 YSMQADLSKPKEGEEKRTRVDYRRLVNSVKVNPNVPLFITYYTLYPDVKGKMHTYADVYG 446

Query: 412 LDNVHVGIIP 421
            D V    + 
Sbjct: 447 YDKVLYRYLR 456


>gi|260912258|ref|ZP_05918809.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633559|gb|EEX51698.1| peptidoglycan binding protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 549

 Score =  217 bits (553), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 29/322 (9%)

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G       L   ++  V   ++  Q ++ L    +      +  ++    R+R L  N+ 
Sbjct: 233 GFYP--TALRKIYNDSVAIFLRESQPQNALYAQLV---KHFKGKSLSAADRVRLL-CNIE 286

Query: 182 RIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           R +   +       +YVLVN+P+  L+A+E   V L   +  G +D +TP+L+S I R+ 
Sbjct: 287 RSRWRQDDYPQNHRKYVLVNVPSFHLDAIEGDSV-LTMRMACGTLDTKTPLLNSHIMRMD 345

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIF 298
            NP W+IPRSII+K+++A    +  Y   +   +++   G+ V    V       P++  
Sbjct: 346 VNPQWIIPRSIIKKEVIAH-AGNTDYFDRHRYFILNRSTGRRVDPCSVSAGMLLTPDYFV 404

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            Q+ G+ N++      F +  + ++HDT     F    R  + GC+RV+   +L V+LLK
Sbjct: 405 VQEGGEGNSLGRIVFRFNNNFSIFIHDTSSKWAFERGNRGVSHGCIRVQKPFELAVFLLK 464

Query: 359 DTPTWSRYHIEEVV-------KTRKT-----------TPVKLATEVPVHFVYISAWSPKD 400
           D        I   +       K  +              VK+   VP+   Y + +    
Sbjct: 465 DKDKSLIDKITYSMQADLSKPKDGEEPKPRVDYRRLVNSVKVNPNVPLFITYYTLYPDMA 524

Query: 401 SIIQFRDDIYGLDNVHVGIIPL 422
             IQ   D+YG D V    +  
Sbjct: 525 GRIQTYADVYGYDQVLYRYLRN 546


>gi|163759199|ref|ZP_02166285.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
 gi|162283603|gb|EDQ33888.1| hypothetical protein HPDFL43_05525 [Hoeflea phototrophica DFL-43]
          Length = 250

 Score =  216 bits (551), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 109/233 (46%), Positives = 154/233 (66%), Gaps = 2/233 (0%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
           S        S ++ IIN       +D+FD   +R      +  PI S +TI   E+A+  
Sbjct: 18  SAAGAAKAQSTIEAIINSPRRGSWDDQFDAKSSRSVAKTATRYPISSADTIGFVERAVFD 77

Query: 85  YQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           YQDI++RGGWP +P  + L +G S   V+ LR+RLI SGDL  + GLS AFD+YV+ AVK
Sbjct: 78  YQDIIARGGWPFVPATKKLRMGVSEPEVRLLRQRLIASGDLSANTGLSNAFDSYVDGAVK 137

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            FQ RHGL P G++ + + +A+NV  D+R+ QL+ NL+R++ +    +G RYV+VNIPAA
Sbjct: 138 KFQARHGLPPDGILGNYSYQALNVSADVRLGQLETNLVRLRSMSGF-LGDRYVMVNIPAA 196

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            +EAVENG+V LR T IVG++DRQTPIL+S+I+ I+ NPYW  PR   +KD++
Sbjct: 197 QIEAVENGRVVLRHTAIVGKIDRQTPILNSKIHEIILNPYWTSPRLDHRKDIV 249


>gi|145637696|ref|ZP_01793349.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
 gi|145269098|gb|EDK09048.1| hypothetical protein CGSHiHH_01956 [Haemophilus influenzae PittHH]
          Length = 461

 Score =  216 bits (549), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 66/218 (30%), Positives = 116/218 (53%), Gaps = 6/218 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 236 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTNSRRTPVMY 292

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 293 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 352

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 353 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSEQ 411

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
           L   LLK+   W+      V+ ++K T   + ++ PV 
Sbjct: 412 LASILLKEA-GWTETRKNTVLASKKNTSAPIRSDNPVF 448


>gi|326388316|ref|ZP_08209912.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207048|gb|EGD57869.1| hypothetical protein Y88_3197 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 386

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 23/244 (9%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R   L  N+ R + L  Q +G  YVLVN  A  +    +G+      V+VG+    TP 
Sbjct: 152 ARRATLATNMDRWRWLP-QSLGADYVLVNAAAFEVRLWRHGQQVGTWPVVVGKTKSPTPT 210

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             ++++ + FNP+W IP +I+++ +  ++R+ P   +                       
Sbjct: 211 FSAQVSGVTFNPWWDIPPAIVRESIGGMMRRHPALARQRGYI------------------ 252

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                  +RQ PG  NA+   K+   +  N Y+HDTPE  LF    R  + GC+RV + I
Sbjct: 253 --HTGASYRQKPGPANALGQMKLVMPNPFNVYLHDTPEKKLFARDTRAFSHGCIRVSDAI 310

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
                L++D    S   ++ ++ T +TT V L   +PV+  Y +A +  D  +    DIY
Sbjct: 311 GFATTLVQDVK--SADEVKAIIATGRTTTVDLPMHLPVYVTYFTATTRSDGTLAILPDIY 368

Query: 411 GLDN 414
             D 
Sbjct: 369 KRDG 372


>gi|149185534|ref|ZP_01863850.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
 gi|148830754|gb|EDL49189.1| hypothetical protein ED21_20954 [Erythrobacter sp. SD-21]
          Length = 475

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 113/271 (41%), Gaps = 25/271 (9%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
                  RI+ ++ N+ R + L  Q +G +Y++ N+P   L    NG++      IVG+ 
Sbjct: 201 ATATDPARIKLIRANMDRWRWLP-QDLGRQYLVTNVPEYMLRLTVNGRIIKSYRTIVGKP 259

Query: 225 DRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVF 282
            R  TP L   +  ++FNP W +P+SI+  + +   +  +P + ++            + 
Sbjct: 260 GRTATPQLAEMVEAVIFNPTWTVPQSIVVGEGLGNKVLNNPGWARNAGYKATKGANGWIT 319

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                            Q PG  N++   K++  + +  ++HDTP   LFN   R  + G
Sbjct: 320 ---------------VVQQPGPTNSLGLMKLDMPNEHAIFLHDTPSRHLFNQDARALSHG 364

Query: 343 CVRVRNIIDLD---VWLLKDTPTWSRYHIEEVVK----TRKTTPVKLATEVPVHFVYISA 395
           C+RV+   +L      L   +       I+E V     + + T  ++  + PV+  Y + 
Sbjct: 365 CIRVKGARELAMTMSMLGNASNRADIPAIQEEVSEITMSGEYTRYEMKKQWPVYITYFTM 424

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPLPEDH 426
            +  +  ++   DIY  D   +  +  P   
Sbjct: 425 ATDVNGEMKTFRDIYDRDKPVLAALDAPRQE 455


>gi|288801197|ref|ZP_06406652.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331808|gb|EFC70291.1| peptidoglycan-binding domain 1 [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 460

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 83/379 (21%), Positives = 159/379 (41%), Gaps = 46/379 (12%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR--ERLIISGDLDPSKGLSVA 133
               KA+  Y  I  R G+   P   L+  +++ +   ++  +RL        ++ +   
Sbjct: 89  YSLTKALFRY-AIGERFGYVT-PSYILNRLDTAETKNGVKNYQRL----YDIHTESVDTL 142

Query: 134 FDAYVESAVKL------FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV--NLMRIKK 185
           F   + ++V        FQ    L  +  +  +  + +      RI +++V  N+ R + 
Sbjct: 143 FVNQLVASVTNDSLQSFFQK---LKTNRSLFKN-FQFLLRKTSTRISKMKVLVNMERCRW 198

Query: 186 LLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
                     +YVLVN+P+  L+AV+   V     V  G +  +TP+L+S I R+  NP 
Sbjct: 199 RHNDYPELHKKYVLVNVPSFYLQAVDEDSV-FSMRVACGALSTKTPLLNSTIERMDINPQ 257

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDP 302
           W+IP SI++K +++ L  +  Y   ++  +     GKE+ + EV  +      +   Q  
Sbjct: 258 WIIPLSIVKKQIISQL-GNRHYFDSHSYFIRHVATGKEIDISEVTPDMLLSGAYKVVQRG 316

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G+ NA+      F +  + Y+HDT     F+   R  + GC+RV   ++L ++LL+D   
Sbjct: 317 GEGNALGRIVFRFPNNFSVYLHDTSSREAFSRFDRGVSHGCIRVEKPLELAIFLLQDKEE 376

Query: 363 WSRYH--------------------IEEVVKTRKTTPVK-LATEVPVHFVYISAWSPKDS 401
                                    +E  +  ++    K L   VP+   Y + +  +  
Sbjct: 377 ALIDKLIYSTTVDMKTDSRNNEKDCLENKIDRKRLINSKSLKPSVPLFITYYTLYPDEKG 436

Query: 402 IIQFRDDIYGLDNVHVGII 420
           +++   D+YG D V    +
Sbjct: 437 VMRDYPDVYGYDKVIARYL 455


>gi|145641085|ref|ZP_01796666.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           R3021]
 gi|145274246|gb|EDK14111.1| hypothetical protein CGSHiR3021_08446 [Haemophilus influenzae
           22.4-21]
          Length = 288

 Score =  212 bits (541), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 67/218 (30%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 63  AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 119

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 120 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 179

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVR+     
Sbjct: 180 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRIEKSDQ 238

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVH 389
           L   LLK+   W+      V+ ++KTT   + ++ PV 
Sbjct: 239 LASILLKEA-GWTETRKNTVLASKKTTSAPIRSDNPVF 275


>gi|218461005|ref|ZP_03501096.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Kim 5]
          Length = 245

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 91/212 (42%), Positives = 136/212 (64%), Gaps = 4/212 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD    +R    I S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTATAIVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           GGWPE+      L LG S  +VQ LR+RL I+GDL    GLS AFD+YV+ AVK FQ RH
Sbjct: 95  GGWPEVNPGDQRLQLGVSHPAVQALRQRLAITGDLPREAGLSSAFDSYVDGAVKRFQARH 154

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G++   TL+AMN+P D+R++QL  N++R++    + +G R+++VNIPAA +EAVE
Sbjct: 155 GLPADGVLGEFTLKAMNIPADVRLQQLNTNIVRLQTFP-EDLGRRHLMVNIPAAYVEAVE 213

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           +G V  R T +VGR+ R T +++S+I  ++ N
Sbjct: 214 DGSVATRHTAVVGRLSRPTHLVNSKIYEVILN 245


>gi|261880240|ref|ZP_06006667.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270333074|gb|EFA43860.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 458

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 116/276 (42%), Gaps = 31/276 (11%)

Query: 176 LQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           + VN+ R +  ++       +YVLVNIP+  L AV+  KV L   +  G    +TP++ S
Sbjct: 183 ILVNMERCRWRMQDNPQRHEKYVLVNIPSFHLRAVDGDKV-LTMRIAFGSNKNKTPLIVS 241

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPE 292
            I R+  NP WV+P+SI++K ++  L  +  Y   N   + +   G+ V V  V     E
Sbjct: 242 AIKRMDVNPQWVMPKSIVRKSVVPQL-GNINYFTQNRYFIRNRQTGEHVDVSSVSPEMLE 300

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             ++   Q  G+ NAM      F +  + Y+HDT    +F+  VR  + GC+RV    +L
Sbjct: 301 SGDYFVIQRGGEGNAMGRIVFRFDNNLSIYLHDTSSRTIFDRSVRNVSHGCIRVEKPFEL 360

Query: 353 DVWLLKDTPTWSRYHIEEVVK--------TRKTTP------------------VKLATEV 386
             ++L          I   +          ++                     V +   V
Sbjct: 361 SKFVLAKKDDKLVDRINYSMHADVSPVNMKKEEMTERMMLVADTLDRSRLIGSVNIKPMV 420

Query: 387 PVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           P+  +Y + +      I+   D+YG D++    +  
Sbjct: 421 PIFILYYTMYPDASGKIETFSDVYGYDSLIYQQLRN 456


>gi|299140698|ref|ZP_07033836.1| periplasmic protein [Prevotella oris C735]
 gi|298577664|gb|EFI49532.1| periplasmic protein [Prevotella oris C735]
          Length = 472

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 33/276 (11%)

Query: 176 LQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           +  N+ R +     + G   +YVLVNIP+  L AV NG+  L   +  G  + +TP+L S
Sbjct: 193 ILCNMERCRWRYYDEPGKHEKYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLTS 251

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPE 292
           RI R+  NP WVIPRSI +K++      D QY   +   + D   G++V  + +  +   
Sbjct: 252 RIMRMDINPQWVIPRSITEKNIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMFH 310

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             +++  Q  G  N++      F +  + ++HDT    +F+   R  + GC+RV    DL
Sbjct: 311 SKDYLVIQKGGIGNSLGRIIFRFNNSFSVFLHDTNRHNVFSQENRGVSHGCIRVERPFDL 370

Query: 353 DVWLLKDTP----------------TWS---RYHIEEVVKTRKTTP---------VKLAT 384
            V+LLKD                    S       ++++K +K            +K+  
Sbjct: 371 AVFLLKDKNESLIRKLHYSMTAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVEP 430

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++P+   Y + +   +  +Q+  D+YG D V   ++
Sbjct: 431 QIPIFITYFTIYPDVNGKLQYFSDVYGYDKVIFDVL 466


>gi|317502835|ref|ZP_07960937.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666050|gb|EFV05615.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 509

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 34/294 (11%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRS 217
            +L A+    + R R +  N+ R +   +    +  +YVLVNIP+  L  V    V    
Sbjct: 215 QSLLAITRDKNER-RTILCNMDRCRWRYKDTPDLHEKYVLVNIPSFHLRMVNRDDV-REM 272

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DE 276
            +  G  D +TP+L SRI R+  NP W++PRSII+K ++     D  Y   ++  +   +
Sbjct: 273 KIGCGSKDTKTPLLTSRIIRMDVNPQWIVPRSIIKKSIVNHC-GDRHYFDSHHFFVRHRK 331

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            GK++  +++        +++  Q  G  N++      F +  + ++HDT +  +F+   
Sbjct: 332 TGKKIPFDQITREMLLSKDYLVIQTGGLGNSLGRIIFRFPNGFSVFLHDTNQQNIFSQTD 391

Query: 337 RFETSGCVRVRNIIDLDVWLLKD-------------TPTWSRYHIEEVVKTRKT------ 377
           R  + GCVRV    DL V+LLKD             T       +    +  K       
Sbjct: 392 RDVSHGCVRVERPFDLAVFLLKDKEASIIRKLHYSMTAKIGEEGVNSSEEEHKNMEKTRP 451

Query: 378 ---------TPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
                      + +  +VP++  Y + +      +Q   D+YG D V    +  
Sbjct: 452 DTLKKSLILRSLSVEPQVPIYLTYFTIYPDGKGKLQHFADVYGFDKVIFKSLRN 505


>gi|315608208|ref|ZP_07883200.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250177|gb|EFU30174.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 514

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 26/273 (9%)

Query: 174 RQLQVNLMRIKKLLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            ++  N+ R +  L+        YVLVNIP+  L AV+   V L   V  G  + +TP+L
Sbjct: 242 AKILCNIERCRWRLKDYPQRYKKYVLVNIPSFKLCAVDGDSV-LEMRVGCGTFETKTPLL 300

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNS 290
           +S+I R+  NP W+IPRSI++K ++  +  D  Y +     + +   G+E+ +++     
Sbjct: 301 YSQIKRMDINPQWIIPRSIVKKSIIKHV-GDKNYFESRGYLIKNIHTGEEIDLDKASLGM 359

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E   F   Q  GK N++      F +  + Y+HDTP    F+   R  + GC+RV+   
Sbjct: 360 LENREFAVIQRGGKGNSLGRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPF 419

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKT-------RKTTPVKLAT--------------EVPVH 389
           +L  ++L +        I   ++         K   + + T              +VP+ 
Sbjct: 420 ELAKFILGNANDELIRKIAYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVKPKVPLF 479

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +Y + +  K+ ++ F DD+YG D V    +  
Sbjct: 480 IIYFTIYPDKNGVLTFYDDVYGYDQVIYRQLKN 512


>gi|288925831|ref|ZP_06419762.1| putative periplasmic protein [Prevotella buccae D17]
 gi|288337486|gb|EFC75841.1| putative periplasmic protein [Prevotella buccae D17]
          Length = 505

 Score =  209 bits (532), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 124/273 (45%), Gaps = 26/273 (9%)

Query: 174 RQLQVNLMRIKKLLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            ++  N+ R +  L+        YVLVNIP+  L AV+   V L   V  G  + +TP+L
Sbjct: 233 AKILCNIERCRWRLKDYPQRYKKYVLVNIPSFKLCAVDGDSV-LEMRVGCGTFETKTPLL 291

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNS 290
           +S+I R+  NP W+IPRSI++K ++  +  D  Y +     + +   G+E+ +++     
Sbjct: 292 YSQIKRMDINPQWIIPRSIVKKSIIKHV-GDKNYFESRGYLIKNIHTGEEIDLDKASLGM 350

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E   F   Q  GK N++      F +  + Y+HDTP    F+   R  + GC+RV+   
Sbjct: 351 LENREFAVIQRGGKGNSLGRIVFRFDNDFSVYLHDTPSRDFFSREDRGVSHGCIRVQKPF 410

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKT-------RKTTPVKLAT--------------EVPVH 389
           +L  ++L +        I   ++         K   + + T              +VP+ 
Sbjct: 411 ELAKFILGNANDELIRKIAYSIQADISIHRDDKNKSLPIDTLNRKLLIRTCYVMPKVPLF 470

Query: 390 FVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +Y + +  K+ ++ F DD+YG D V    +  
Sbjct: 471 IIYFTIYPDKNGVLTFYDDVYGYDQVIYRQLKN 503


>gi|284038422|ref|YP_003388352.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
 gi|283817715|gb|ADB39553.1| ErfK/YbiS/YcfS/YnhG family protein [Spirosoma linguale DSM 74]
          Length = 378

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 76/254 (29%), Positives = 120/254 (47%), Gaps = 10/254 (3%)

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVD 225
           +   L I Q+Q  L   + L   +   + ++VNIP+A+L  ++  GK  L S V+VG+ D
Sbjct: 122 MSDSLTIEQVQETLNTYRWLNRFR-NSKRIVVNIPSATLRVIDRQGKTLLNSRVVVGKAD 180

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY-LKDNNIHMIDEKGKEVFVE 284
             TP+  + I  ++  PYW +PRSI+ K+M+  ++++P   L   N+ +ID KG+ V  +
Sbjct: 181 TPTPLFTAFIPSLVMYPYWNVPRSIMVKEMLPRIQKNPALVLSFLNLDVIDAKGQVVDPK 240

Query: 285 EVDWN------SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
            V+W+            +  RQ  G  NA+   K    S  + Y+HDT     F +  R 
Sbjct: 241 TVNWSVSASAVYNGSFPYRLRQATGCANALGVLKFNVNSPYDVYLHDTNARHAFASENRQ 300

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GC+RV    +L   LL  T  +S  ++    K      V+L   VPV   Y      
Sbjct: 301 LSHGCIRVEKPAELANLLLGYT-RFSDDYLTSCPKNASPKTVQLPVSVPVITTYNVLDID 359

Query: 399 KDSIIQFRDDIYGL 412
               IQ   D+YG 
Sbjct: 360 AAGAIQVYPDVYGK 373


>gi|281425838|ref|ZP_06256751.1| putative cell wall degradation protein [Prevotella oris F0302]
 gi|281400099|gb|EFB30930.1| putative cell wall degradation protein [Prevotella oris F0302]
          Length = 472

 Score =  209 bits (532), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 33/276 (11%)

Query: 176 LQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           +  N+ R +     +     +YVLVNIP+  L AV NG+  L   +  G  + +TP+L S
Sbjct: 193 ILCNMERCRWRYYDEPSKHEKYVLVNIPSFHLRAV-NGREVLEMKIGCGTTETKTPLLTS 251

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPE 292
           RI R+  NP WVIPRSI +K++      D QY   +   + D   G++V  + +  +   
Sbjct: 252 RIMRMDINPQWVIPRSITEKNIANHF-GDRQYFDSHRYFVRDRKTGQKVPFDRITQDMFH 310

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             +++  Q  G  N++      F +  + ++HDT    +F+   R  + GC+RV    +L
Sbjct: 311 SKDYLVIQKGGIGNSLGRIIFRFNNSFSVFLHDTNRHNVFSQENRRVSHGCIRVERPFEL 370

Query: 353 DVWLLKDTP----------------TWS---RYHIEEVVKTRKTTP---------VKLAT 384
            V+LLKD                    S       ++++K +K            +K+  
Sbjct: 371 AVFLLKDKNESLIRKLHYSMTAEIGGESTVLPEEEKKMIKKQKPDTLQRSMLISSLKVEP 430

Query: 385 EVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           ++P+   Y + +   +  +Q+  D+YG D V   ++
Sbjct: 431 QIPIFITYFTIYPDVNGKLQYFSDVYGYDKVIFDVL 466


>gi|103486925|ref|YP_616486.1| hypothetical protein Sala_1440 [Sphingopyxis alaskensis RB2256]
 gi|98977002|gb|ABF53153.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
          Length = 409

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 59/251 (23%), Positives = 97/251 (38%), Gaps = 17/251 (6%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            + ++VN+ R + +  + +G RYV+ N+P      V  G V      +VG+    TP L+
Sbjct: 142 AQAIRVNMERWRWMP-RDLGERYVVSNVPEYLTRVVHGGTVIATHKAVVGKKSTPTPQLN 200

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
                I+ NP W +PRSII + + A + ++P   +                      +  
Sbjct: 201 PMATGIIVNPNWTLPRSIINEGIGATIARNPAAARAQGYT----------------WTGS 244

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                  Q PG  NA+   K+E  + +  Y+HDTP    FN   R  + GC+R    +  
Sbjct: 245 GKTLSVVQKPGPNNALGVMKMEMLNEHAIYLHDTPSKNAFNAAARAFSHGCIRTERALHF 304

Query: 353 DVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGL 412
              +       S     E + + KTT        PV+  Y +        ++   D+Y  
Sbjct: 305 SGLMAVMFAGRSPEEFGEAIASGKTTRFGFDQPFPVYVAYWTVVPDGKGGVKKLADLYER 364

Query: 413 DNVHVGIIPLP 423
           D   V     P
Sbjct: 365 DAPVVASFARP 375


>gi|255036894|ref|YP_003087515.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
 gi|254949650|gb|ACT94350.1| ErfK/YbiS/YcfS/YnhG family protein [Dyadobacter fermentans DSM
           18053]
          Length = 398

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 69/255 (27%), Positives = 118/255 (46%), Gaps = 4/255 (1%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVEN-GKVGLRSTVI 220
             +          +   L   + +  Q  G  R+VLVNI  A L A+++ G+  L    +
Sbjct: 140 RLLKAQKKDSAAYVAQTLNAYRWIHRQIQGSPRFVLVNIRGAYLTAMDSAGQNVLTMRTV 199

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+ D  TP + +    I+ +PYW +P+SI  K++      DP+YL  N I +I + G+ 
Sbjct: 200 VGKRDTPTPTIDTYATSIVTHPYWNVPKSIAIKEIFPKAAADPEYLSRNRIQVIGKDGQA 259

Query: 281 VFVEEVDWNSPEP--PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +  +E+DW         + FRQ+ G+ N++   K+E  +    Y+HDT    LF +  R+
Sbjct: 260 IDPQELDWGDLTAEKFPYRFRQETGEDNSLGLLKVEIKNPLAIYLHDTNARYLFKSGQRW 319

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP 398
            + GCVRV+   DL  ++       S +  E    +      KL   +PV  +Y+ A   
Sbjct: 320 RSHGCVRVQYPTDLANYMAGSKLLDSDFMTEPDSVSHPPKWHKLQVRIPVFLLYLPADCN 379

Query: 399 KDSIIQFRDDIYGLD 413
               + +  D+Y  +
Sbjct: 380 PKGDLMYFPDVYKRE 394


>gi|307946680|ref|ZP_07662015.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770344|gb|EFO29570.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 429

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 70/292 (23%), Positives = 129/292 (44%), Gaps = 10/292 (3%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINE-SYHSIVNDRFDNF--LARVDMGIDSDIPIISKETI 75
            L     +    +  + +++ +N         D F      +     +DS    +   + 
Sbjct: 141 FLRYATHVSSGRVQPNKINKALNIFPDRPKAKDLFHALETTSNFSAFLDSL--PLQTASY 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            + +  +  Y++  + GG+  +P    L        V  L+ERL+    L   +     +
Sbjct: 199 LRLQIRLGEYREKAANGGFTSIPKGEVLKPEMIDPRVPTLKERLVQEDFLLAEQHSGSTY 258

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           +  +  AVK FQ  HGL+  G++  STLEA+NV ++ R+ Q+++N+ R + +    +G  
Sbjct: 259 NGALVEAVKNFQSYHGLEVDGIIGKSTLEALNVSINDRLIQMELNMERRRWMP-DNLGDT 317

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           YV VN+   +L+ V NGK    + VIVG+    TP+    +  +  NPYW +P SI  ++
Sbjct: 318 YVFVNLADQALKVVRNGKTWHTTPVIVGKPYHATPVFSDVMTYVEVNPYWNVPYSISTRE 377

Query: 255 MMALLRQDPQYL-KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            +  L+ +   L +  +  + + KG  VF  ++   S       F   PG  
Sbjct: 378 YLPKLQANANALSEKKHAGISERKGSCVFKRQL--VSLFTAKLPFPAAPGPG 427


>gi|197105408|ref|YP_002130785.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
 gi|196478828|gb|ACG78356.1| hypothetical protein PHZ_c1945 [Phenylobacterium zucineum HLK1]
          Length = 483

 Score =  206 bits (524), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 33/300 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +  ++  +   + +A+   + R G    G+     + A              N+ R + 
Sbjct: 202 AAARMNPVY-EELRAALAEHRARSG----GVATERLILA--------------NMDRARG 242

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L    +G R++LVN  +A L   E+G+   R  VIVGR    TP +   I    F PYW 
Sbjct: 243 LPRA-LGPRFILVNAASAELRVYEDGEEVDRMPVIVGRPSAATPPMAGVIRYARFRPYWN 301

Query: 246 IPRSIIQKDMMAL-LRQDPQYLKDNNIHMIDEKG---KEVFVEEVDWNSPEPPN--FIFR 299
           +P  +++++     LR+ P +L       + +     + +   E+DW +          R
Sbjct: 302 LPEGMVREEFAPRVLREGPGFLAAAGFEALSDWSPQARVLDPAEIDWRAVARGERSLRLR 361

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
           Q PG  N + + K+   +    Y+HDTP+   F    R  ++GC+R+ +   L   LL+ 
Sbjct: 362 QSPGPGNILGNVKLMLPNHLGIYLHDTPDKASFRRSRRTLSAGCIRLADADRLTRRLLEW 421

Query: 360 TPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGI 419
                               V L   VPV+ +Y++A   +   +    D+YG D+  +  
Sbjct: 422 EEGERPPE-------GLNQRVDLPRGVPVYILYLTAERGEGGEVLRHPDLYGRDSQVIAA 474


>gi|145629244|ref|ZP_01785043.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
 gi|144978747|gb|EDJ88470.1| hypothetical protein CGSHi22121_10590 [Haemophilus influenzae
           22.1-21]
          Length = 459

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 6/206 (2%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            ++L +N  R++ + +   G   + VNIP+  L+   +G + L S VIVG   R+TP+++
Sbjct: 234 AQKLAMNAQRLRVIPDFHNG---IFVNIPSYKLQYYRDGDLILESRVIVGTDSRRTPVMY 290

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP- 291
           S+++ ++ NP W  P  +I +D++  ++ DP Y+ ++N  ++D +G  V    +DW S  
Sbjct: 291 SKLSNVVVNPPWNAPIRLINEDLLPKMKADPNYITEHNYSILDNQGNVVDPASIDWESIG 350

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
               +  RQ  G  +A+ + K    S +  Y+HDTP   LFN   R  +SGCVRV     
Sbjct: 351 NKFPYRVRQAAG-DSALGNYKFNMPSSDAIYLHDTPNRGLFNRKNRALSSGCVRVEKSDQ 409

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKT 377
           L   LLK+   W+      V+ ++K 
Sbjct: 410 LASILLKEA-GWTETRKNTVLASKKP 434


>gi|300727069|ref|ZP_07060488.1| putative cell wall degradation protein [Prevotella bryantii B14]
 gi|299775613|gb|EFI72204.1| putative cell wall degradation protein [Prevotella bryantii B14]
          Length = 507

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 128/272 (47%), Gaps = 14/272 (5%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTV 219
           L+  N+  + R R L VN+ R +  L        +YV+VNIPA SL AV+  KV  +  V
Sbjct: 236 LQKPNITAEQR-RLLLVNMERSRWRLSDYPYLHTKYVIVNIPALSLFAVDGDKVQ-QMKV 293

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKG 278
           +VG +  +TP+LHS   R+  NP W+IP SI+ K  +A    +  Y   ++  + +   G
Sbjct: 294 VVGALKTKTPLLHSNFTRMDINPQWLIPMSIL-KSSVARFAGNTSYFNRHHYFIRNRSTG 352

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           K V   +V        N++  Q+ G  N++      F +  + Y+HDT    +F    R 
Sbjct: 353 KVVPTNQVTSAMILSGNYVVVQEGGPYNSLGRIIFRFNNDYSIYLHDTNSRGVFQKEDRC 412

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRY-----HIEEVVKTRKTTPV---KLATEVPVHF 390
            + GCVRV N  DL V++L +  +          ++ V    K   +   K+  ++PV  
Sbjct: 413 LSHGCVRVENPFDLAVFMLDNNKSVIGRIKYSMTVDSVTGPDKNKLIHSMKVMQDIPVFI 472

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           VY + +  +   ++   D+YG D +    +  
Sbjct: 473 VYYTLYPNRQGELEQYQDVYGYDQIIYKHLKN 504


>gi|312886219|ref|ZP_07745834.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301326|gb|EFQ78380.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 542

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 48/297 (16%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-------- 224
           +R +++N+ R++         RY+ VNIPA  L+ +EN KV     V +G          
Sbjct: 243 LRTIKLNMERLRWQTPA-KDSRYLWVNIPAFKLQWIENKKVVFDMKVCLGEPKPAGYDTM 301

Query: 225 ---------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
                          + +T IL SRIN I  NP W IP SI Q ++   + ++P YL +N
Sbjct: 302 LLRYLKTHSIDDKPVNHETTILCSRINTIQLNPNWNIPSSIAQNEIYYAILRNPAYLSNN 361

Query: 270 NIHMIDEKGKEVFVEEVDWNSPE--PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
           NI +  +       + + W   +     + F+QD  ++NA+   K  F +    Y+HDTP
Sbjct: 362 NIRVYYKDKLVTQPDTIRWGRIQRQKIPYKFKQDASELNALGKFKFIFDNEAGIYLHDTP 421

Query: 328 EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE--------------EVVK 373
               F +  R  + GCVRV + + L   L+ DT       +E                ++
Sbjct: 422 NKKAFGSSWRAVSHGCVRVEDPLKLSEALVNDTNMVDNIRMEVGLKPVNLKDTTKYNAIQ 481

Query: 374 TR--------KTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
            +        K+  + L  ++ +   Y + W  ++  + F  D Y +D V    +  
Sbjct: 482 AKRAVKGFELKSKYIGLKPDMQLFIDYYTCWPDENGKLVFYADAYRMDTVLEKAMGK 538


>gi|294674104|ref|YP_003574720.1| lipoprotein [Prevotella ruminicola 23]
 gi|294472724|gb|ADE82113.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 496

 Score =  203 bits (517), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 121/294 (41%), Gaps = 27/294 (9%)

Query: 152 DPSGMVDSSTLEAMNVPV-DLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVE 209
            P   +  + L  M+      +  QL VN+ R +  +E      R +LVNIPA  L A++
Sbjct: 195 APDTYIYKALLREMDKTTNADKRHQLAVNMERCRWQIEHPKDVKRQILVNIPAQQLWAID 254

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
              V L   +  G V  +TP+LHS I+ +  NP WVIP++I++ +++     D  Y   N
Sbjct: 255 VDSV-LDMRICCGAVPTKTPLLHSAISYMQVNPEWVIPQNIVKTEVVHH-AGDSAYFARN 312

Query: 270 NIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
              +ID+  G  + V  V  N+         Q  G  N++        +  + Y+HDT  
Sbjct: 313 RYSVIDKESGDTLNVASVGANALLSGKLRISQKGGVGNSLGRIVFRSQNDFSIYLHDTNN 372

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY------HIEEVVKTRKT----- 377
              F    R  + GCVRV+   +L  +LL D   W+         I  V    +      
Sbjct: 373 RSAFQRDRRTLSHGCVRVQKPFELASFLLSDVDEWTLESLRISMDIPPVTDRGREWLHKH 432

Query: 378 ----------TPVKLATEVPVHFVYISAWSPKD-SIIQFRDDIYGLDNVHVGII 420
                     +   +   VP++ +Y + +       I +  D+YG D V    +
Sbjct: 433 ADAPHPYRLISYHAVKPHVPLYILYYTTFPNPKTGAIDYWPDLYGFDKVISKEL 486


>gi|282879885|ref|ZP_06288612.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
 gi|281306279|gb|EFA98312.1| conserved domain protein [Prevotella timonensis CRIS 5C-B1]
          Length = 491

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 29/271 (10%)

Query: 179 NLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           NL R +  L+  +    +YV+VNIPA  L A+++ +V +R  V VG    +TP+L SRI 
Sbjct: 220 NLERTRWRLKDNLFAQDKYVMVNIPAMELLAIDHEQV-MRMRVGVGTNTTKTPLLSSRIM 278

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPN 295
           R+  NP WV+P+SII K +      D  Y +++   + +   G  V   +V         
Sbjct: 279 RMDVNPQWVMPKSIIDKSVA-RHAGDSAYFENHRYFIRNRETGNRVDPRQVTSEMLRSGQ 337

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +   Q+ GK NAM      F +    Y+HDT    +F+   R  + GCVRV    +L V+
Sbjct: 338 YFVIQEGGKGNAMGRIVFRFKNNFAVYLHDTSSRGVFDQSNRGVSHGCVRVEKPFELAVF 397

Query: 356 LLKDTPTWSRYHIEEVVK------------------------TRKTTPVKLATEVPVHFV 391
           LLKD        +   ++                        ++    V++   VP++  
Sbjct: 398 LLKDKDEELIEKMRYSMQADIHSHYQKKLTATSNLPNDTLQESKLINSVRVQPAVPLYIT 457

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           Y + +  +   ++   DIYG D V    +  
Sbjct: 458 YYTLYPNEQHGMREYQDIYGFDAVIYKQLKN 488


>gi|87198452|ref|YP_495709.1| hypothetical protein Saro_0427 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134133|gb|ABD24875.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 499

 Score =  202 bits (515), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 105/257 (40%), Gaps = 18/257 (7%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-T 228
             +   ++ N+ R + L  + +G +Y+L N+P   L      K+     VIVG+  +  T
Sbjct: 239 QKQAALIRANMDRWRWL-ARDLGTQYLLANVPEQVLRLTVRNKIISTYKVIVGKPGKTAT 297

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           P L   +  ++FNP W +P+SI+  + + A L  +P+  +     +       +      
Sbjct: 298 PQLAETVEGVIFNPTWTVPQSIVVGEGLGARLVNNPRQAEREGYKVTKAGDGTI------ 351

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                       Q PG  N++   K++  + +  ++HDTP   LFN   R  + GCVRV 
Sbjct: 352 ---------YVVQQPGDNNSLGRMKLDMPNEHAIFLHDTPNRNLFNLPARALSHGCVRVE 402

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
              +L + +       +         ++  T V +    PV+  Y +     + +++   
Sbjct: 403 RATELAMTMAILGAGMTPDDAVAAHTSKVYTKVPMTKTFPVYLTYFTVARDVNGMLRSFP 462

Query: 408 DIYGLDNVHVGIIPLPE 424
           DIY  D   +     P 
Sbjct: 463 DIYNRDAPVLATFAQPR 479


>gi|148554282|ref|YP_001261864.1| hypothetical protein Swit_1361 [Sphingomonas wittichii RW1]
 gi|148499472|gb|ABQ67726.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 418

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 96/247 (38%), Gaps = 31/247 (12%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L+ NL R + +  + +G RY+ VNIP   L  + NG       V+VG     TP L    
Sbjct: 192 LRANLERWRWMP-RDLGDRYIYVNIPGYRLSVINNGIEEASYNVVVGAPRTPTPQLELYA 250

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             I+ NP W +P SI++              +      I      V              
Sbjct: 251 QSIVANPGWTVPHSIVKAGGT----------RGKGFRWIRNPDGSVSAW----------- 289

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               Q PG  NA+   KI+  + +  Y+HDTP   +F    R  + GC+RV NI +L   
Sbjct: 290 ----QAPGPTNALGRIKIDMPNPHAIYLHDTPNRAVFARENRALSHGCIRVENIEELAAM 345

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
           L              +    KT   +L   VPV+ VY +A +  D  ++   D YG D  
Sbjct: 346 LQGGDGLD-----AALADPGKTKVFQLERSVPVYLVYFTAQADPDGTVRPLGDPYGRDKA 400

Query: 416 HVGIIPL 422
            +  +  
Sbjct: 401 LLAKLGA 407


>gi|326386118|ref|ZP_08207742.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209343|gb|EGD60136.1| hypothetical protein Y88_2010 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 505

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/256 (23%), Positives = 106/256 (41%), Gaps = 18/256 (7%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-TP 229
            +I  ++ N+ R + L  + +GL+Y+++N+P   L    N K+      IVGR  +  TP
Sbjct: 246 KQIAMIRANMDRWRWLG-RDLGLQYLIINVPEQELRLTVNNKIIRTYKAIVGRPGKTATP 304

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMAL-LRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
            L  ++  ++FNP W +P+SI+  + +   L   P   K             +       
Sbjct: 305 QLAEQVKNVVFNPTWTVPQSIVVGEGLGKDLIAHPAKAKRLGYVATQSADGTIT------ 358

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                      Q PG  NA+   K++  + +  Y+HDTP   LFN   R  + GC+R   
Sbjct: 359 ---------VVQQPGNTNALGRVKLDMPNDHAIYIHDTPNRTLFNQPQRALSHGCIRAER 409

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDD 408
             +L + +             +   + K T V +A   PV+  Y +     + +++   D
Sbjct: 410 ATELAMTMAILGADLPPQTAVDYSLSGKYTKVPMAKPFPVYITYFTVARDVNGLMRSFPD 469

Query: 409 IYGLDNVHVGIIPLPE 424
           +YG D   +     P 
Sbjct: 470 LYGRDAKVIASFAQPR 485


>gi|282877810|ref|ZP_06286623.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
 gi|281300126|gb|EFA92482.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
          Length = 361

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 32/277 (11%)

Query: 174 RQLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R++  NL R +  L+ + G   +Y L+N+P+  L A ++ K  L   + +G +D +TP++
Sbjct: 82  RKVICNLERARWRLDDEPGKHEKYALINLPSMHLMARDHDKT-LSMRIGIGALDTKTPLI 140

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-DEKGKEVFVEEVDWNS 290
            SRI R+  NP WV+PRSII+K ++     +  Y       +   + GK + V +V  + 
Sbjct: 141 TSRIVRMDVNPQWVMPRSIIEKSVVPQ-AGNKDYFDARRYFIRERKTGKRMDVTQVSADM 199

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +  N+   Q+ GK NAM      F ++   Y+HDT    +F    R  + GC+R+    
Sbjct: 200 LKSGNYFVIQEGGKGNAMGRIVFRFKNKFAIYLHDTSSKGVFEREDRGVSHGCIRLEKPF 259

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTR------------------KT---------TPVKLA 383
           D  V+LL D    +   I   ++                    +T           V++ 
Sbjct: 260 DFAVFLLNDKDEKTIERIRYSMEADIHSTYMDDNPSSDKKPSMETNKLDRAKLIKSVQVK 319

Query: 384 TEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
             VP+   Y + +  +++++    D+YG D+V    +
Sbjct: 320 PTVPLFITYYTLYPNENNVMTEYPDVYGFDSVIYHQL 356


>gi|281422421|ref|ZP_06253420.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
 gi|281403484|gb|EFB34164.1| putative cell wall degradation protein [Prevotella copri DSM 18205]
          Length = 451

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 13/271 (4%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTV 219
           L+A  +   +RI+ L  N+ R +           +YV+VNIP+  L A+++ +  L   +
Sbjct: 182 LKAGGLGKAMRIKIL-CNMERCRWRQYDNPWQHEKYVVVNIPSFHLLAIDH-QDTLSMRI 239

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKG 278
             G    +TPIL+S I R+  NP W +PRSI+  DM+  +  +  Y +  N ++ +   G
Sbjct: 240 GCGASKTKTPILNSHIKRMELNPQWFVPRSIVLHDMIHRV-GNHGYFRARNYYVREVATG 298

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KEV ++ V  +      +   Q  GK NA+      F +  + ++HDT    +F    R 
Sbjct: 299 KEVDLDRVTRSMLISGAYGIAQRGGKGNALGRIIFRFDNNFSVFLHDTNSKGVFGQEDRG 358

Query: 339 ETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK-------TTPVKLATEVPVHFV 391
            + GC+R+    D  V+LL D     +  I   +              VK+  +VP+   
Sbjct: 359 VSHGCIRIEKPYDFAVFLLADKNEKLKEKIYYSMTADSLANKKLVVNNVKVNPQVPLFIT 418

Query: 392 YISAWSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           Y + +      I    D+YG D +   ++  
Sbjct: 419 YYTLYPLAGGRIADYSDVYGFDAIIFDMLRK 449


>gi|240142210|ref|YP_002966720.1| hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
 gi|240012154|gb|ACS43379.1| Hypothetical protein MexAM1_META2p0532 [Methylobacterium extorquens
           AM1]
          Length = 290

 Score =  196 bits (497), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 65/227 (28%), Positives = 101/227 (44%), Gaps = 8/227 (3%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
               R V+VN+    L A  +G+  L S V+VGR    TP L + +  +  NP W +P +
Sbjct: 62  PSSGRLVVVNVAGRFLAAYRDGEPELESRVVVGRDGWHTPDLATSVASVTLNPTWTVPET 121

Query: 250 IIQKD-MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           I++ +     L  DP + + N   ++   G+ V  + V   + E       Q PG  NA+
Sbjct: 122 ILRDEGWRGELASDPGWAERNGFDVLLG-GRRVAADRVG--TAELLKATLVQRPGADNAL 178

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              KI   +  + Y+HDT EP  F++     + GCVRV   ++L  W+L      S   +
Sbjct: 179 GRMKIAMRNAGSIYLHDTNEPGGFDDPGHSGSHGCVRVELALELATWVL----GASGPEV 234

Query: 369 EEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
            ++V    T        VPV F Y +AW      + +  DIY  D  
Sbjct: 235 ADLVLGGSTIVRTTPEPVPVVFGYFTAWPDAVGRVAYYPDIYRRDAA 281


>gi|163759200|ref|ZP_02166286.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
 gi|162283604|gb|EDQ33889.1| hypothetical protein HPDFL43_05530 [Hoeflea phototrophica DFL-43]
          Length = 125

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 63/125 (50%), Positives = 92/125 (73%)

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           +FRQDPGK NAM+STKI F++ +  YMHDTP+  +FN ++RFE+SGCVRV+N+ DL+ WL
Sbjct: 1   MFRQDPGKGNAMSSTKINFHNPHAVYMHDTPQQGVFNQLMRFESSGCVRVQNVRDLNTWL 60

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNVH 416
           L+DTP W+R  IE  + + ++T + L+  VPV+F Y +AW+ +D ++QFRDD+Y  D V 
Sbjct: 61  LRDTPGWNRQAIEATIASGESTEILLSEPVPVYFTYFTAWASEDGVVQFRDDVYQRDGVE 120

Query: 417 VGIIP 421
              + 
Sbjct: 121 ELALR 125


>gi|323345681|ref|ZP_08085904.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
 gi|323093795|gb|EFZ36373.1| cell wall degradation protein [Prevotella oralis ATCC 33269]
          Length = 507

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 96/444 (21%), Positives = 161/444 (36%), Gaps = 57/444 (12%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           +     SL+      S +     +     + D   +  +        DI  +        
Sbjct: 78  VDCRADSLLAFLKTVSEMGFSPRKFRAQTIEDDLTHLRSLNVDAAKYDINRLLARLEYNL 137

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            KA   Y                   G  +   +R+  RL +       K     +D  +
Sbjct: 138 TKAYLRYTAGQ-------------RFGFMNP--KRIFNRLDVYEPDSLHKSFRGLYDIPM 182

Query: 139 ESAVKLF--------------QMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMRI 183
           E A KLF              Q  H + P   +  S L  +          ++  N+ R 
Sbjct: 183 ELAGKLFFEAALRKIGNDSVAQFLHEVQPQNPLYVSLLNRLKQCSTQTERIKMLCNMERC 242

Query: 184 KKLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           +  L        +YVLVNIP+  L AV+   V L   +  G ++ +TP+L SRI R+  N
Sbjct: 243 RWRLYDYPWRHRKYVLVNIPSFHLRAVDQDSV-LEMKIGCGSLETKTPLLTSRIMRMDLN 301

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG-KEVFVEEVDWNSPEPPNFIFRQ 300
           P WVIPRSI++K +      D  Y   +  ++ + K  K + V  V  +     ++   Q
Sbjct: 302 PQWVIPRSIVRKSIANH-AGDSAYFASHRYYVRERKTIKRIPVSLVSRSMLNSSDYFVIQ 360

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           + G+ NA+      F +  + ++H T  P +F    R  + GCVRV   +DL V+LLK+ 
Sbjct: 361 EGGEGNALGRIIFRFNNNFSVFLHYTSAPGVFEQSSRDVSHGCVRVEKPLDLAVFLLKNK 420

Query: 361 PTWSRYHIEEVV-----------KTRKTTP-----------VKLATEVPVHFVYISAWSP 398
                  I   +           +                 +K+  EVP+   Y + +  
Sbjct: 421 DEKIIEKIRYSMTVDLGNQRDKGQRGVEFRPPVDKSKLIGSLKVEPEVPLFITYYTLYPD 480

Query: 399 KDSIIQFRDDIYGLDNVHVGIIPL 422
           +   ++   D+YG D V    +  
Sbjct: 481 RYGQLEEFPDVYGYDRVIYNYLGN 504


>gi|148553414|ref|YP_001260996.1| hypothetical protein Swit_0490 [Sphingomonas wittichii RW1]
 gi|148498604|gb|ABQ66858.1| Uncharacterized protein [Sphingomonas wittichii RW1]
          Length = 572

 Score =  192 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 15/253 (5%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                  +++L++NL R + L       R+V+V+  +A L   E GK      V+VG  +
Sbjct: 331 RKSPRETVQRLRLNLDRARLLPGPWT--RHVVVDAASARLWYYEGGKQRAMMRVVVGAPE 388

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMIDEKGKEVFV 283
            +TP+L   +   + NPYW +P  +IQ+ +   +     P  L+   +       + +  
Sbjct: 389 TETPMLAGMVRYAVLNPYWNVPDYLIQRRLAPKIVAGATPASLRMEVLSDWSASPRRLAG 448

Query: 284 EEVDWNSPEPPN--FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
           +EVDW +          RQ PG+ NAM   K  F +    Y+HDTP+  L +   R  ++
Sbjct: 449 DEVDWPAVAAGRKLVRMRQLPGRDNAMGRVKFIFPNDLGIYLHDTPDKGLLSKADRHLSN 508

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GC+R+++   L   +                  +    V L   +PV+  YI+A   +  
Sbjct: 509 GCIRLQDAPGLYRLMF--------GRPLPAASKQPERDVALPAPIPVYLTYITATPTERG 560

Query: 402 IIQFRDDIYGLDN 414
            I F  D+YG D 
Sbjct: 561 -IGFLKDVYGRDE 572


>gi|254501948|ref|ZP_05114099.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
 gi|222438019|gb|EEE44698.1| hypothetical protein SADFL11_1986 [Labrenzia alexandrii DFL-11]
          Length = 522

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 123/371 (33%), Gaps = 28/371 (7%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            +T    +  +     +   GG+  L     L  G     V  LR R+   G L      
Sbjct: 163 DDTYRLLKTHLERLYAVKDDGGFTYLDIQEELSPGAQGDQVPDLRRRMFEDG-LVGEGTG 221

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              FD  +  AV   + R+ L  S  V    + A+N+P++ RI Q+   + RI+ +  + 
Sbjct: 222 GELFDKRLAFAVAQSKHRYVLPVSSEVTPRLIRALNIPIERRIEQVSNAMERIRWIPPE- 280

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
                + +N         E+G+V +         DR      + I  + F+P W +P   
Sbjct: 281 FSRVKLFINKGENQFVFSESGRVVMEGQAFANCPDRNHANTATAIEAVTFHPTWQVPLEF 340

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-------NFIFRQDPG 303
           +  +++  L+ DP  ++    ++   KG +V +  + W    P         F       
Sbjct: 341 LGNELLPRLKDDPTEVEGVGYYL-RRKGADVPLSSLPWGQATPRAINRFKDEFNLYLPAS 399

Query: 304 KINAMASTKIEFYSRNNT---YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL-LKD 359
             N + S              ++   PE  +F N             N   +   L L +
Sbjct: 400 DENPLGSYAFRLRQEQKLALFHLDSAPEDGVFCNPYLPA--------NAFGIVDGLALLE 451

Query: 360 TPTWSR----YHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDNV 415
                R      IE  +    T      + +     + S W      I+F  D Y  D+ 
Sbjct: 452 QVIEPRVFPAEGIENRLARGDTITFPARSGLMAVATHQSVWLQYQGAIRFGHDPYLEDSR 511

Query: 416 HVGIIP-LPED 425
               +   P+ 
Sbjct: 512 LTAALSGRPKP 522


>gi|218680582|ref|ZP_03528479.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli CIAT 894]
          Length = 150

 Score =  188 bits (477), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 84/133 (63%), Positives = 103/133 (77%), Gaps = 1/133 (0%)

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
             E +DWN  E PN +FRQDPGK NAMASTKI FY++N  YMHDTP+  LFN ++RFE+S
Sbjct: 2   PPETIDWNG-EAPNLMFRQDPGKTNAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESS 60

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV+N+ DL  WLL++TP W+R  +E+V+ T   TPVKLATEVPV+FVYISAW   D 
Sbjct: 61  GCVRVQNVRDLSNWLLRETPGWNRQQMEQVIATGVNTPVKLATEVPVYFVYISAWGMPDG 120

Query: 402 IIQFRDDIYGLDN 414
           I+QFRDDIY +D 
Sbjct: 121 IVQFRDDIYQMDG 133


>gi|204789654|gb|ACI02035.1| hypothetical protein [uncultured bacterium]
          Length = 397

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 32/259 (12%)

Query: 132 VAFDAYVESAVKLF------QMRHGLDPSGMVDSST-LEAMNVPVDLRIR---------- 174
             FD  ++ A   F      Q+R  +D  G     + L A    V  +            
Sbjct: 139 GLFDVKMQHASDAFFHLALQQLRSKVDVDGEETEKSRLAAFLKDVQPKSPFYYTLQEKLK 198

Query: 175 ----------QLQVNLMRIKKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVIVG 222
                     ++ VN+ R +           +YVLVNIP+  L A++  +  L   +  G
Sbjct: 199 SEGLDRNQRMKILVNMERCRWREADSPARHKKYVLVNIPSFHLYAIDE-QDTLAMKIGCG 257

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEV 281
               +TPIL+S I R+  NP W +PRSI+ KDM+     +P Y    N ++ D   G+EV
Sbjct: 258 STKTKTPILNSYIKRMDLNPKWFVPRSIMVKDMVHH-AGNPAYFNARNYYISDRSTGEEV 316

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
              +V         +   Q  GK N++      F +  + Y+HDT    +F+   R  + 
Sbjct: 317 NPAQVTRTMLLSGKYGVVQRGGKGNSLGRIIFRFDNNFSVYLHDTSSQAVFSREDRDVSH 376

Query: 342 GCVRVRNIIDLDVWLLKDT 360
           GC+RV    +L  +LL + 
Sbjct: 377 GCIRVEKPFELAKFLLHEK 395


>gi|218515096|ref|ZP_03511936.1| hypothetical protein Retl8_16076 [Rhizobium etli 8C-3]
          Length = 152

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 5/138 (3%)

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            G  V    VDW      N   RQ P   NA+   KI F + +  YMHDTP    F   +
Sbjct: 3   NGHAVASSSVDWYGST-DNVSVRQPPSSDNALGELKILFPNSHAIYMHDTPSKSFFKRDM 61

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAW 396
           R  + GCVR+ N   +   +L  T       + + + + +   V++  ++PV+  Y +AW
Sbjct: 62  RALSHGCVRLSNPRAMAAAVLGTTVDD----VAKQIASGQNHAVRVPQKIPVYVSYFTAW 117

Query: 397 SPKDSIIQFRDDIYGLDN 414
             K+ ++++ DD+YG D 
Sbjct: 118 PNKEGVVEYFDDVYGRDA 135


>gi|218458505|ref|ZP_03498596.1| hypothetical protein RetlK5_03208 [Rhizobium etli Kim 5]
          Length = 239

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 58/244 (23%), Positives = 100/244 (40%), Gaps = 19/244 (7%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRL 114
                I S  P   +      +  +A  +     G   ++       L  G+SS  +  +
Sbjct: 1   DTGAYIASRSPDSPQ--FEALKAELAKLRA-ADGGNEGQIVVSLSGLLRPGDSSPEIANI 57

Query: 115 RERLIISGDLDPSKGLSVA---------FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + +   G        +           +   + + V+ FQ   GL   G++  +T+ AM
Sbjct: 58  VKAVQKHGSETLRTDHAATFAAYAGGSDYSPEIVALVEDFQKERGLKADGVIGQATVRAM 117

Query: 166 NV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                   +I +L+V + + + L  + +G RYV++N PA      ++GK  L   V+VG 
Sbjct: 118 TGGDTNASKIDKLEVAMEQARWLP-EDLGSRYVMINQPAYMAYYHDDGKEQLSMRVVVGG 176

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            + QT   +  I  + FNP+W +P+SII  +M+  LR DP YL      +    G  V  
Sbjct: 177 KNNQTYFFNDEIETVEFNPFWGVPQSIIINEMLPKLRSDPNYLDQLGYEV-RVNGHAVAS 235

Query: 284 EEVD 287
             VD
Sbjct: 236 SSVD 239


>gi|257453413|ref|ZP_05618708.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
 gi|257449165|gb|EEV24113.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
          Length = 495

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 88/334 (26%), Gaps = 50/334 (14%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKA----------IAFYQDILSRGGWPELPIRPL 102
               +       +  P     T+   + A          ++ Y  +++   W        
Sbjct: 163 AGASSEEVNNTTTAAPTFDPTTVGNNKTATTPASFSTLNLSDYAQLVNSADW-------- 214

Query: 103 HLGNSSVSVQRLRERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G +  S   L+  L    D        +   +    + A+K FQ  HGL   G + + 
Sbjct: 215 KPGQNVNSATTLK--LQALLDWNHASPGPIDGGWGMNAKKALKNFQAMHGLPQDGRMSAE 272

Query: 161 TLEAMNVPV---DLRIRQLQVNLMRIKKLL-EQKMGLRYVLVNIPAASLEAVENGKVGLR 216
             + +N  +      +    +    IK        G             +  E       
Sbjct: 273 VWKLLNEKIPANQPVLVGYTLTQEDIKGPYQPTPSGSEAKSKMKGLYYQDVQEMLAERFH 332

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI-- 274
             +   +               +FNP    P +     ++A    +  Y  + +  +   
Sbjct: 333 MDIRYLKKLNSDKKFTVGETITVFNPG--APLNEKITRLVAKKADNILYAYNGDRLIATY 390

Query: 275 ------------DEKGKEVFVEEVDWNSPEPP----NFIFRQDPGKINAMASTKIEFYSR 318
                             V   +  W            +F   PG  + +    +     
Sbjct: 391 PTTVGSSDTPSPTGTFSIVNRVKNPWYRASSGEGKDKKVFMLPPGPKSPVGVVWMGLSKP 450

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +  +H +P P   +   R  + GCVR+ N   L
Sbjct: 451 -SYGIHGSPVPEGIS---RQASHGCVRLTNWDVL 480


>gi|262371387|ref|ZP_06064705.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter johnsonii SH046]
 gi|262313724|gb|EEY94773.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter johnsonii SH046]
          Length = 345

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 78/271 (28%), Gaps = 32/271 (11%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVD 170
            +L+  L        S  +          A+  FQ+  GL   G++D++T   +N V   
Sbjct: 71  AKLQVLLSR--HYSSSGAIDGILGLNTVKAISAFQIMKGLSGDGVLDANTWRLLNEVTTQ 128

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQT 228
               +  +    +K    Q + + Y   +           E          +  +     
Sbjct: 129 PTFIEYTITTQDLKGPYAQSIPVDYAEQSKMKGLYYTRVTEMLGEKFHMDELFLKKINSG 188

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEE 285
              +    +I+      +  + +Q  +     +    L   N  +       G E     
Sbjct: 189 ANFNKVGEKIIVANVINVLPNNVQSIIAHKGSKQLYLLNRQNKIIASFPATIGSEDNPSP 248

Query: 286 VDWNS-----------PEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
              ++             P NF            PG  N + +  I      +  +H TP
Sbjct: 249 TGTHAIGSIVFNPHYSYNPKNFIQGKNLKPLSLPPGPNNPVGNIWIGLSRP-SFGIHGTP 307

Query: 328 EPILFNNVVRFETSGCVRVRNIID--LDVWL 356
            P L +      + GC+R+ N     L   L
Sbjct: 308 NPALISKT---ASHGCIRLTNWDANNLAKVL 335


>gi|262372118|ref|ZP_06065397.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
 gi|262312143|gb|EEY93228.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
          Length = 402

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 72/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI-RQLQVNLMRI 183
                +  +       A+  FQ  +GL P+G +   T +A+          +  +    +
Sbjct: 139 ASPGAIDGSNGKNTLKAIASFQQMNGLTPTGELTKETWDALVAKQTKPAYVEYTITEADL 198

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             +    T        +I+  
Sbjct: 199 KGPYAESIPSDYALQAKMKGLYYTRVTEMLGEKFHMDENFLKKINPTATFKKAGEKIIVA 258

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V +  
Sbjct: 259 NVRNDLPEDIHLIVAHKGARQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVAKNP 318

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 319 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPSPSLISKT---AS 374

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 375 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 400


>gi|255318424|ref|ZP_05359657.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
 gi|262378654|ref|ZP_06071811.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255304416|gb|EET83600.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
 gi|262299939|gb|EEY87851.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 418

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 70/281 (24%), Gaps = 43/281 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD--LRIRQLQVNLMR 182
                +          A+  FQ  +GL P+G++   T +A+           +  +    
Sbjct: 154 ASPGAIDGMSGKNTLKAIASFQQMNGLKPTGVLTKETWDALVAKTAGKPAFVEYTITEDD 213

Query: 183 IKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +K      +   Y L         +   E             +             +I+ 
Sbjct: 214 LKGPYASSIPSDYALQAKMKGLYYVRVSEMLGEKFHMDEDFLKKLNPKATFKKAGEKIIV 273

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
                     I   +     +        N  +                   K   V   
Sbjct: 274 ANVRNDLPEDIHLIVAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPAGTYKVTGVAPN 333

Query: 287 DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            W S  P NF            PG    + +  I    + +  +H TP P L +      
Sbjct: 334 PWYSYSPSNFVQGNNKKPLSLPPGPNGPVGNIWIGLS-KKSFGIHGTPNPSLISKT---A 389

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
           + GC+R+ N              W    + + V++  T   
Sbjct: 390 SHGCIRLTN--------------WDANDLGKKVRSGVTVKF 416


>gi|254489086|ref|ZP_05102290.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
 gi|214042094|gb|EEB82733.1| peptidoglycan-binding domain 1 [Roseobacter sp. GAI101]
          Length = 236

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 83/245 (33%), Gaps = 44/245 (17%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           P        +  L RI    +     + +LVNIPA  L A + G   LRS +IVG    +
Sbjct: 33  PATTSTDVFKTQLDRIGVSYQVPREGKAILVNIPAFELIAFDRGVPVLRSRIIVGTPWHR 92

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP L + ++ + F P W    S+I            +Y                      
Sbjct: 93  TPRLTTYVSAVRFRPTWRPTPSMIA---------SGEYADR------------------- 124

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                         PG+ N +    I        Y+HDT     F+   R  + GCVRV+
Sbjct: 125 -----------VWPPGRNNPLGLVAIRLQPGLLVYLHDTNHREKFDQEYRALSHGCVRVQ 173

Query: 348 NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRD 407
               L  ++L          +  +   R+T  V     +PV   Y + +      I    
Sbjct: 174 QWDRLVAFVL----GIDLAEVHRLANGRETFDVPAP-PIPVTLGYFTRFPNAAGQIVDHP 228

Query: 408 DIYGL 412
           DIY L
Sbjct: 229 DIYRL 233


>gi|169632913|ref|YP_001706649.1| hypothetical protein ABSDF1149 [Acinetobacter baumannii SDF]
 gi|169151705|emb|CAP00498.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii]
          Length = 418

 Score =  142 bits (358), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 155 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 214

Query: 184 KKLLEQKMGLRY--VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y   +           E             +    T        +I+  
Sbjct: 215 KGPYAQSIPSDYALQVKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 274

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 275 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTETPSPTGTYKVVGVARNP 334

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKTT---S 390

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 391 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 416


>gi|325122922|gb|ADY82445.1| ATP synthase [Acinetobacter calcoaceticus PHEA-2]
          Length = 412

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+             ++   +
Sbjct: 149 ASPGAIDGMSGKNTLKAISSFQQMNGLSPTGELTKETWDALVAKQTKPAFIEYTISDADL 208

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             +    T        +I+  
Sbjct: 209 KGPYAESIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKAGEKIIVP 268

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 269 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 328

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 329 WYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 384

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 385 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 410


>gi|323518861|gb|ADX93242.1| hypothetical protein ABTW07_2818 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 415

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 70/281 (24%), Gaps = 42/281 (14%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 152 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 211

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 212 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 271

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 272 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 331

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 332 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 387

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
            GC+R+ N              W    +   V++  T    
Sbjct: 388 HGCIRLTN--------------WDANDLGNKVRSGVTVKFS 414


>gi|293609704|ref|ZP_06692006.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828156|gb|EFF86519.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 415

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+             ++   +
Sbjct: 152 ASPGAIDGMSGKNTLKAISSFQQMNGLSPTGELTKETWDALVAKQTKPAFIEYTISDADL 211

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             +    T        +I+  
Sbjct: 212 KGPYAESIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKAGEKIIVP 271

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 272 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 331

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 332 WYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 387

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 388 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 413


>gi|299769283|ref|YP_003731309.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
 gi|298699371|gb|ADI89936.1| hypothetical protein AOLE_05195 [Acinetobacter sp. DR1]
          Length = 412

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+             ++   +
Sbjct: 149 ASPGAIDGMSGKNTLKAISSFQQMNGLSPTGDLTKETWDALVAKQTKPAFIEYTISDADL 208

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             +    T        +I+  
Sbjct: 209 KGPYAESIPSDYALQAKMKGLYYTRVTEMLGEKFHIDEAFLKKINPTATFKKAGEKIIVP 268

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 269 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPAGTYKVVGVARNP 328

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 329 WYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 384

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 385 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 410


>gi|184158889|ref|YP_001847228.1| hypothetical protein ACICU_02569 [Acinetobacter baumannii ACICU]
 gi|213158089|ref|YP_002320140.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
 gi|215482781|ref|YP_002324982.1| hypothetical protein ABBFA_001071 [Acinetobacter baumannii
           AB307-0294]
 gi|239502499|ref|ZP_04661809.1| hypothetical protein AbauAB_09314 [Acinetobacter baumannii AB900]
 gi|301347442|ref|ZP_07228183.1| hypothetical protein AbauAB0_14373 [Acinetobacter baumannii AB056]
 gi|301596121|ref|ZP_07241129.1| hypothetical protein AbauAB059_09914 [Acinetobacter baumannii
           AB059]
 gi|332854140|ref|ZP_08435198.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332867906|ref|ZP_08437908.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
 gi|332875748|ref|ZP_08443548.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
 gi|183210483|gb|ACC57881.1| uncharacterized protein conserved in bacteria [Acinetobacter
           baumannii ACICU]
 gi|193077900|gb|ABO12790.2| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
 gi|213057249|gb|ACJ42151.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii AB0057]
 gi|213988538|gb|ACJ58837.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|322508867|gb|ADX04321.1| putative exported protein [Acinetobacter baumannii 1656-2]
 gi|332728196|gb|EGJ59582.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332733679|gb|EGJ64837.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
 gi|332736072|gb|EGJ67099.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
          Length = 415

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 152 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 211

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 212 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 271

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 272 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 331

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 332 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 387

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 388 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 413


>gi|260556712|ref|ZP_05828930.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
 gi|260409971|gb|EEX03271.1| ErfK/YbiS/YcfS/YnhG family [Acinetobacter baumannii ATCC 19606]
          Length = 418

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 155 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 214

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 215 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 274

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 275 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 334

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 390

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 391 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 416


>gi|169795243|ref|YP_001713036.1| hypothetical protein ABAYE1105 [Acinetobacter baumannii AYE]
 gi|169148170|emb|CAM86033.1| conserved hypothetical protein; putative exported protein
           [Acinetobacter baumannii AYE]
          Length = 418

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 155 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 214

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 215 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 274

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 275 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 334

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 390

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 391 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 416


>gi|35210436|dbj|BAC87914.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 415

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 152 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 211

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 212 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 271

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 272 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 331

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 332 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 387

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 388 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 413


>gi|301511179|ref|ZP_07236416.1| hypothetical protein AbauAB05_06353 [Acinetobacter baumannii AB058]
          Length = 415

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 152 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 211

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 212 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDETFLKKINPTATFKKVGEKIIVP 271

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 272 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 331

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 332 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 387

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 388 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 413


>gi|262278335|ref|ZP_06056120.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258686|gb|EEY77419.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 416

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 69/280 (24%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL  +G +   T +A+             ++   +
Sbjct: 153 ASPGAIDGMSGKNTLKAISSFQQMNGLSATGELTKETWDALVAKQTKPAFIEYTISDADL 212

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 213 KGPYAQSIPSDYALQAKMKGLYYTRISEMLGEKFHIDEAFLKKINPTATFKKAGEKIIVP 272

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 273 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPAGTYKVVGVARNP 332

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 333 WYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 388

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 389 HGCIRLTN--------------WDANDLGSKVRSGVTVKF 414


>gi|126642408|ref|YP_001085392.1| hypothetical protein A1S_2371 [Acinetobacter baumannii ATCC 17978]
          Length = 396

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 70/280 (25%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+    +        +    +
Sbjct: 133 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQNKPAFIEYTITDADL 192

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    Q +   Y L             E             +    T        +I+  
Sbjct: 193 KGPYAQSIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEAFLKKINPTATFKKVGEKIIVP 252

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 253 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 312

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 313 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 368

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 369 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 394


>gi|50085556|ref|YP_047066.1| putative signal peptide [Acinetobacter sp. ADP1]
 gi|49531532|emb|CAG69244.1| conserved hypothetical protein; putative signal peptide
           [Acinetobacter sp. ADP1]
          Length = 462

 Score =  140 bits (353), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 67/280 (23%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI-RQLQVNLMRI 183
                +          A+  FQ  +GL P+G +   T  A+    +     +  +    +
Sbjct: 199 ASPGAIDGTSGMNTLKAISSFQQINGLKPTGELTQETWSALVAKQNKPAYVEYTLTEDDL 258

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K      +   Y           +   E             +             +I+  
Sbjct: 259 KGPYAPSIPHDYAQQAKMKGLYYVRVTEMLGEKFHMDEDFLKKLNPKASFKKAGEKIIVA 318

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 319 NVRNDLPEDIHLIIAHKGARQLYLFNSRNQMIASFPATIGSSDTPSPTGTYKVVGVARNP 378

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P   +      +
Sbjct: 379 WYSYSPSNFVQGNNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSAISKT---AS 434

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 435 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 460


>gi|260549740|ref|ZP_05823957.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
 gi|260407257|gb|EEX00733.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
          Length = 418

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 42/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRI 183
                +          A+  FQ  +GL P+G +   T +A+             +    +
Sbjct: 155 ASPGAIDGMSGKNTLKAIASFQQMNGLSPTGELTKETWDALVAKQTKPAFIEYTITDADL 214

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             +             +I+  
Sbjct: 215 KGPYAESIPSDYALQAKMKGLYYTRVSEMLGEKFHIDEGFLKKLNPKATFKKVGEKIIVP 274

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K V V    
Sbjct: 275 NVRNDLPEDIHLIIAHKGAKQLYLFNSRNQMIASFPATIGSTDTPSPTGTYKVVGVARNP 334

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P L +      +
Sbjct: 335 WYSYSPSNFVQGKNLKPLSLPPGPNAPVGNIWIGLS-KKSFGIHGTPNPSLISKT---AS 390

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    +   V++  T   
Sbjct: 391 HGCIRLTN--------------WDANDLGNKVRSGVTVKF 416


>gi|262369492|ref|ZP_06062820.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262315560|gb|EEY96599.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 416

 Score =  139 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 67/281 (23%), Gaps = 43/281 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR--QLQVNLMR 182
                +          A+  FQ   GL  +G +   T +A+      +    +  +    
Sbjct: 152 ASPGAIDGMSGKNTLKAIASFQQMSGLKATGTLTKETWDALLASQGSKPAFIEYTITEAD 211

Query: 183 IKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +K      +   Y L             E             +      I      +I+ 
Sbjct: 212 LKGPYAASIPRDYALQAKMKGLYYTRVTEMLGEKFHMDEDFLQKLNPKAIFKKAGEKIIV 271

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM--------------IDEKGKEVFVEEV 286
                     I   +     +        N  +                   K   V   
Sbjct: 272 ANIRNEVPEDIHLIVAHKGAKQLYLFNSRNQMIGSFPATIGSSDTPSPTGTYKVTGVAPN 331

Query: 287 DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            W S  P NF            PG    + +  I    + +  +H TP P   +      
Sbjct: 332 PWYSYSPSNFVQGKNLKPLSLPPGPNGPVGNIWIGLS-KKSFGIHGTPNPSAISKT---A 387

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
           + GC+R+ N              W    + + VK+  T   
Sbjct: 388 SHGCIRLTN--------------WDANDLGKKVKSGVTVKF 414


>gi|226952587|ref|ZP_03823051.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|294649883|ref|ZP_06727283.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226836667|gb|EEH69050.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|292824257|gb|EFF83060.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 412

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 65/250 (26%), Gaps = 28/250 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI-RQLQVNLMRI 183
                +  +       A+  FQ  +GL P+G +   T +A+          +  +    +
Sbjct: 149 ASPGAIDGSNGQNTLKAIASFQQMNGLTPTGQLTKETWDALVAKQTKPAYVEYTITEADL 208

Query: 184 KKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           K    + +   Y L             E             R        +    +I+  
Sbjct: 209 KGPYAESIPTDYALQAKMKGLYYTRVTEMLGEKFHMDERFLRQLNPRANFNKVGEKIVVA 268

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVD 287
                    I   +     +        N  +                   K   V +  
Sbjct: 269 NVRNDLPEDIHLIVAHKGAKQLYLFNSRNQMIASFPATIGSTSTPSPTGTYKVTGVAKNP 328

Query: 288 WNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           W S  P NF            PG    + +  I    + +  +H TP P + +      +
Sbjct: 329 WYSYSPSNFVQGKNLKPLSLPPGPNGPVGNIWIGLS-KKSFGIHGTPNPSMISKN---AS 384

Query: 341 SGCVRVRNII 350
            GC+R+ N  
Sbjct: 385 HGCIRLTNWD 394


>gi|262375967|ref|ZP_06069198.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262309061|gb|EEY90193.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 410

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 68/281 (24%), Gaps = 43/281 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVDLRIRQLQVNLMR 182
                +          A+  FQ  +G+ P+G++   T + +           +  +    
Sbjct: 146 ASPGAIDGTSGKNTLKAIASFQQMNGIKPTGVLTQETWDKLVARQGSKPTFVEYTITEKD 205

Query: 183 IKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +     + +   Y L             E             +        +    +++ 
Sbjct: 206 LAGPFAKSIPSDYALQAKMKGLYYTSVSEMLSEKFHMDENFLKKLNPNANFNKVGEKLLV 265

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           +         I   +     +        N  +                   K   V   
Sbjct: 266 SNVRNDLPEGIHLIVAHKGAKQLYLFNSKNQMIASFPATIGSADTPSPTGTYKVTGVAPN 325

Query: 287 DWNSPEPPNF-------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
            W S  P NF            PG    + +  I    + +  +H TP P   +      
Sbjct: 326 PWYSYSPSNFVQGKNLKPLSLPPGPNGPVGNIWIGLS-KKSFGIHGTPNPSSISKT---A 381

Query: 340 TSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
           + GC+R+ N              W    +   VK+  T   
Sbjct: 382 SHGCIRLTN--------------WDANDLGRKVKSGVTVRF 408


>gi|148652734|ref|YP_001279827.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148571818|gb|ABQ93877.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 432

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 66/250 (26%), Gaps = 28/250 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV---PVDLRIRQLQVNLM 181
                +   +      A+  FQ   GL  +G +D++T   +     P    + Q  +   
Sbjct: 174 ASPGPIDGGWGMNSTKALANFQTMRGLPSTGKMDTATWNELTKKINPKQPVLVQYTLTKE 233

Query: 182 RIKK-LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
                L     G             +  E         V       +           + 
Sbjct: 234 DANTPLAPTPSGSEAKSKMKGLYYQDIKEMLGERFHMDVRYLEKLNKGKRFVEGETITVI 293

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI--------------DEKGKEVFVEEV 286
           N     P       ++A       Y  + N  +                   K V   ++
Sbjct: 294 NVG--DPLKAKINRVIANKADKTLYAYNGNQLVATYPTTVGSTSTPSPTGTFKIVNKVKM 351

Query: 287 DWNSPEPPNFIFRQ----DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            W      N   +Q     PG  N +    +      +  +H +P P   +   R  ++G
Sbjct: 352 PWYKSTVKNGDKKQVFMLPPGPNNPVGVVWMGLSKP-SYGIHGSPVPEGIS---RQASAG 407

Query: 343 CVRVRNIIDL 352
           CVR+ N   L
Sbjct: 408 CVRLTNWDVL 417


>gi|116621255|ref|YP_823411.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224417|gb|ABJ83126.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 317

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 86/290 (29%), Gaps = 33/290 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G     V R +  L  +        +  +F   ++ AV  FQ    +  SG V
Sbjct: 30  AQGDLAQGAKGAGVVRAQILLARAHF--SCGEIDGSFGTNLQKAVMAFQNDRKIPASGTV 87

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLR 216
           D++T  A+N      +    ++   +                +PA       E       
Sbjct: 88  DAATWGALNSDAAPALIPYTISDQDVAGPFVPVPADMKQQAKMPALGYASPQELLGEKFH 147

Query: 217 STVIVGRVDRQTPILHSRINRI-MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           S+  + +       L     ++ + N   + P    +  +         Y +   +    
Sbjct: 148 SSPQLLQALNPGADLAKPGQQLNVPNVVVMTPPQAARVVVSKSESSVRAYDEGGKLLAFY 207

Query: 276 EK--GKEVFVEEVD--------------------WNSPEPPNFIFRQDPGKINAMASTKI 313
               G E     +                     W++ +  +      PG  N +    I
Sbjct: 208 SATIGSEHDPLPIGEWKIKGVGRNPKFHYNAELFWDAKDRND-RETLPPGPNNPVGLVWI 266

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +    +   +H TPEP    +     + GC+R+ N   ++L   +   TP
Sbjct: 267 DLSKEH-YGIHGTPEPGKIGHTE---SHGCIRLTNWDALELAAMVRPGTP 312


>gi|116251611|ref|YP_767449.1| ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256259|emb|CAK07340.1| putative exported ErfK/YbiS/YhnG family protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 337

 Score =  134 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 80/288 (27%), Gaps = 33/288 (11%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G+   ++ RL+  L  +G       +       V+ AV  F+  + L   G
Sbjct: 39  SIGTEKPAPGDPDPAIVRLQVLLDRAG--SSPGVIDGLSGENVDKAVAGFEAMNNLPVDG 96

Query: 156 MVDSSTLEAMNVPV---DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENG 211
            +D      +          +    V+      L+++          + +       E  
Sbjct: 97  RLDPEVASRLEGNAPIVAPIVESYVVSAEDAAGLVDKIPEDYGEKAKMQSLGYTSVAEKL 156

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                  + +                 + NP       + + +      Q   Y  D ++
Sbjct: 157 SERFHMGIDLVHALNPASQFAPGDTVWVVNPGPPRGGKVKRIEADRKTGQVLAYAADGSL 216

Query: 272 HMIDEK--GKEVFVEEVDWNSPEP----------PNFIFRQ---------DPGKINAMAS 310
             +     G E        +  +           P   F+Q           G    + +
Sbjct: 217 LAVYPATIGSEDNPAPSGKHKVKGVARMPVYRYDPKRNFKQGKNDKVLTIPKGPNGPVGT 276

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             I+        +H TPEP L + V    + GCVR+ N    +L   +
Sbjct: 277 VWIDLTEP-TYGIHGTPEPKLIDKVG---SHGCVRLTNWDAEELAAMV 320


>gi|254522184|ref|ZP_05134239.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
 gi|219719775|gb|EED38300.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
          Length = 319

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 76/273 (27%), Gaps = 34/273 (12%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLE 163
              +   R  L     LD +       D  V      AV  FQ  HGL  +G +D +T +
Sbjct: 37  GPDIAA-RSPLHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGELDEATWK 95

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           A+    +  +    +    +    +    G                E+      ++  + 
Sbjct: 96  ALQADANAPLASYTLTAEDVAGPFQPVPKGPAAQAKLKALGYGSVEESLGERFHASPELL 155

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGK 279
           +V      L    NRI        P     K ++       Q L      +       G 
Sbjct: 156 KVLNPGVDLGKAGNRIQVPNIAPAPLPKAAKVVVDKSDSTLQLLDAQGKVIAQVPVSSGS 215

Query: 280 EVFVEEVD--------------------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +     +                     W++ +         PG  N +    I+    +
Sbjct: 216 QHDPLPIGEWKILGVYRDPPFHYNPKLFWDARKGEK-KATLPPGPNNPVGRVWIDLSKPH 274

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +H TPEP          + GCVR+ N   L
Sbjct: 275 -YGLHGTPEPGHVGKTE---SHGCVRMTNWDAL 303


>gi|332978420|gb|EGK15137.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. 1501(2011)]
          Length = 435

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 66/250 (26%), Gaps = 28/250 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV---PVDLRIRQLQVNLM 181
                +   +      A+  FQ   GL  +G +D++T  A+     P    + Q  +   
Sbjct: 177 ASPGPIDGGWGMNSTKALSNFQTMKGLPSTGKMDTATWNALTKNIDPNQPVLVQYTLTKE 236

Query: 182 RIKKLLEQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +    +    G                E         V       +           + 
Sbjct: 237 DVNTNFQDTPSGSEAKSKMKGLYYQNIKEMLGERFHMDVRYLEKLNKGKSFTEGETLTVI 296

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI--------------DEKGKEVFVEEV 286
           N     P       ++A       Y  + +  +                   K V   ++
Sbjct: 297 NVG--EPLKEKINRVIADKATKTLYAYNGDKLVATYPTTVGSTSTPSPSGTFKIVNKVKM 354

Query: 287 DWNSPEPPNFIFRQ----DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            W      N    Q     PG  N +    +      +  +H +P P   +   R  ++G
Sbjct: 355 PWYKSTVKNGDKSQVFMLPPGPNNPVGVVWMGLSKP-SYGIHGSPVPEGIS---RQASAG 410

Query: 343 CVRVRNIIDL 352
           CVR+ N   L
Sbjct: 411 CVRLTNWDVL 420


>gi|150377011|ref|YP_001313607.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150031558|gb|ABR63674.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 327

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 31/273 (11%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             ++  L+  L  +G       +   +   V  A+  F+    L   G +D   +  ++ 
Sbjct: 52  DPAIVHLQVLLDRAG--SSPGVIDGYYGENVTKAIAGFEAMQKLPTDGKLDPEVVSRLSE 109

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDR 226
                I+   +     K L+            +         E         V + +   
Sbjct: 110 D-KPAIQSYVITEEDTKDLVSDIPNDYSEQAEMDNLGYKSVEERLSERFHMDVDLLKTLN 168

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVE 284
                 +     +  P       + + ++     Q   + +D     +     G E    
Sbjct: 169 PNSSFDTGETVWVAMPGAPKEGVVKRIEVRKRSGQVLAFAEDGAPIAVYPASIGSEASPS 228

Query: 285 EVDWNSPEP-------------------PNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
               +  +                     N       G  N + +  I+        +H 
Sbjct: 229 PSGRHKVKGVARMPPYVYDPEVNFQQADNNKPLTLPKGPNNPVGTVWIDLTKP-TYGIHG 287

Query: 326 TPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           TPEP L +     ++ GCVR+ N    +L   +
Sbjct: 288 TPEPSLIDK---AQSHGCVRLTNWDAEELAEMV 317


>gi|312890410|ref|ZP_07749947.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297180|gb|EFQ74312.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 436

 Score =  130 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 85/206 (41%), Gaps = 31/206 (15%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T  A  +  +   R + VNL R++    +    +YVLVNIP   L  ++NGK  L   V
Sbjct: 234 GTTAAPGMSAEETQRAILVNLERLRWK-NKPSESKYVLVNIPDYQLNFMDNGKSILNMKV 292

Query: 220 IVGR----------------------VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
            VG                         R+TP L+S I     NP W IP+SI  K+++ 
Sbjct: 293 CVGEGRNKDHSHNLVEYDDSYQIDRPFSRETPQLNSMIYVAEVNPVWNIPQSIASKEIIV 352

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN---FIFRQDPGKINAMASTKIE 314
              +DP YL + NI +     +    E + W +        + F+Q PG  N++   K  
Sbjct: 353 EAAKDPYYLSNKNIVVYKGGQEVEDPETIKWATLSENEKASYSFKQKPGDDNSLGKIKFL 412

Query: 315 FYSRNNTYMHDT---PEPILFNNVVR 337
           F +  N Y+  T   P   L N   R
Sbjct: 413 FKNSTNVYL--TILRPSRHLLNRCGR 436


>gi|13488433|ref|NP_109440.1| hypothetical protein mll9583 [Mesorhizobium loti MAFF303099]
 gi|14028187|dbj|BAB54779.1| mll9583 [Mesorhizobium loti MAFF303099]
          Length = 376

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 31/278 (11%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S S+ RL+  L  +G       +       +  A+  F+M  GL   G +    + A++ 
Sbjct: 102 SPSIVRLQVLLDRAG--ASPGVIDGLDGGNLRHAIAAFEMMRGLPVDGRIGPQVIAAIDA 159

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PAASLEAVENGKVGLRSTVIVGRVDR 226
                I    V    +  ++         +  +         E             +   
Sbjct: 160 D-KQVIGSYVVTADDLSTVVGAIPKDYARMAEMKYLGYARPSEAVAERFHMDEDFLKALN 218

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI--DEKGKEVFVE 284
                       + +         ++ ++     Q   Y +D ++        G E    
Sbjct: 219 PGATFAEGETISVADLSSGKRGKAVRVEVDKAEGQVRAYAEDGSLLAAFPATIGSEENPS 278

Query: 285 EVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHD 325
               ++             P   F+Q          PG    + +  I+     +  +H 
Sbjct: 279 PSGMHTVRAVVSNPSYTYNPKLNFKQGNNDKVLTLPPGPNGPVGTVWIDLSEP-SFGIHG 337

Query: 326 TPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
           TPEP   +      + GCVR+ N    +L   L    P
Sbjct: 338 TPEPARIDKTG---SHGCVRLTNWDAGELGKLLSPGVP 372


>gi|16264761|ref|NP_437553.1| hypothetical protein SM_b21573 [Sinorhizobium meliloti 1021]
 gi|15140899|emb|CAC49413.1| hypothetical exported protein [Sinorhizobium meliloti 1021]
          Length = 327

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 80/284 (28%), Gaps = 34/284 (11%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           ++  L+  L  +G       +   +   V  AV  ++    L   G +D      +    
Sbjct: 54  AIVHLQILLDRAG--SSPGVIDGYYGENVTKAVAGYEAMQRLPVDGKLDPEVFSRLPQD- 110

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP-AASLEAVENGKVGLRSTVIVGRVDRQT 228
              I+   +     K L+++          +         E         + + +     
Sbjct: 111 QPVIQSYAITEEDAKDLVDEIPDDYSKQAKMDHLGYTSVEERLSERFHMDLDLLKALNPG 170

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEV 286
                     +  P       + + ++     Q   + +D +         G E      
Sbjct: 171 SSFAVGETVWVAKPGAAKEGEVKRIEVRKRAGQVLAFAEDGSPLAAYPASIGSEGSPSPT 230

Query: 287 DWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTP 327
             +  +           P+  F+Q           G  N + +  I+        +H TP
Sbjct: 231 GTHKVKGVARMPPYEYDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEP-TYGIHGTP 289

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
           EP L +     ++ GCVR+ N    +L   +    P      I+
Sbjct: 290 EPSLIDK---AQSHGCVRLTNWDAEELAAMV---KPGVVAEFID 327


>gi|307313300|ref|ZP_07592924.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307320767|ref|ZP_07600178.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306893585|gb|EFN24360.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306899313|gb|EFN29948.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 327

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 80/284 (28%), Gaps = 34/284 (11%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           ++  L+  L  +G       +   +   V  AV  ++    L   G +D      +    
Sbjct: 54  AIVHLQILLDRAG--SSPGVIDGYYGENVTKAVAGYEAMQRLPVDGKLDPEVFSRLPQD- 110

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP-AASLEAVENGKVGLRSTVIVGRVDRQT 228
              I+   +     K L+++          +         E         + + +     
Sbjct: 111 QPVIQSYAITEEDAKDLVDEIPDDYSKQAKMDHLGYTSVEERLSERFHMDLDLLKALNPG 170

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEV 286
                     +  P       + + ++     Q   + +D +         G E      
Sbjct: 171 SSFAVGETVWVAKPGAAKEGEVKRIEVRKRAGQVLAFAEDGSPLAAYPASIGSEGSPSPT 230

Query: 287 DWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTP 327
             +  +           P+  F+Q           G  N + +  I+        +H TP
Sbjct: 231 GTHKVKGVARMPPYEYDPDVNFKQGDNDEALTLPKGPNNPVGTVWIDLTEP-TYGIHGTP 289

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
           EP L +     ++ GCVR+ N    +L   +    P      I+
Sbjct: 290 EPSLIDK---AQSHGCVRLTNWDAEELAAMV---KPGVVAEFID 327


>gi|289808938|ref|ZP_06539567.1| hypothetical protein Salmonellaentericaenterica_32767 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 108

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 1/91 (1%)

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           MHDTP   LF    R  +SGCVRV    +L   LL+D   W+   I   +K   T  V +
Sbjct: 1   MHDTPNHNLFQRDARALSSGCVRVNKASELANMLLQDA-GWNDARISGALKQGDTRYVNI 59

Query: 383 ATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
              +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 60  RQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 90


>gi|86357371|ref|YP_469263.1| hypothetical protein RHE_CH01741 [Rhizobium etli CFN 42]
 gi|86281473|gb|ABC90536.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 330

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 85/305 (27%), Gaps = 34/305 (11%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++    L   +   ++ RL+  L  +G       +       V+ AV  F+  + L   G
Sbjct: 36  DIGKGKLQPADPDPAIVRLQVLLDRAG--SSPGVIDGLSGENVDKAVAGFEAMNKLPVDG 93

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVG 214
             D      +       I    V+      L+++          + +       E     
Sbjct: 94  RPDPDVASRLEDN-SPIIESYVVSPEDATGLVDRIPEDYGEKAKMQSLGYTSVAEKLSER 152

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
               + +                 + NP       +   +      Q   Y +D ++  +
Sbjct: 153 FHMDLDLLNALNPGSHFAPGDKVWVVNPGPPRQGKVKSIEADKKTGQVLAYGEDASLLAV 212

Query: 275 DEK--GKEVFVEEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKI 313
                G E        +  +           P   F+Q           G    + +  I
Sbjct: 213 YPATIGSEDNPAPSGKHKVKGVSRMPVYRYDPKRNFKQGKNNKVLTIPKGPNGPVGTVWI 272

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEV 371
           +        +H TPEP L + V    + GCVR+ N    +L   +    P      +   
Sbjct: 273 DLTEP-TYGIHGTPEPKLIDKVG---SHGCVRLTNWDAEELAGMV---KPGVPVEFVNRS 325

Query: 372 VKTRK 376
           +  RK
Sbjct: 326 LADRK 330


>gi|241204240|ref|YP_002975336.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858130|gb|ACS55797.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 334

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 78/285 (27%), Gaps = 33/285 (11%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                  +   ++ RL+  L  +G       +       V+ AV  F+  + L   G +D
Sbjct: 39  AGKPKPADPDPAIVRLQVLLDRAG--SSPGVIDGLSGENVDKAVAGFEAMNNLPVDGRLD 96

Query: 159 SSTLEAMNVPV---DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVG 214
                 +          +    V+      ++++          + +       E     
Sbjct: 97  PEVASRLEGNAAIVAPIVESYVVSAEDAAGVVDKIPEDYGEKAKMQSLGYTSVAEKLSER 156

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
               + +                 + +P       + + +      Q   Y  D ++  +
Sbjct: 157 FHMGIDLVHALNLASQFAPGDTVWVVDPGSPRQGKVKKIEADRKTGQVLAYAADGSLLAV 216

Query: 275 DEK--GKEVFVEEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKI 313
                G E        +  +           P   F+Q           G    + +  I
Sbjct: 217 YPATIGSEDNPAPSGKHKVKGVARMPVYRYDPKRNFKQGKNDKVLTIPKGPNGPVGTVWI 276

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +        +H TPEP L + V    + GCVR+ N    +L   +
Sbjct: 277 DLTEP-TYGIHGTPEPKLIDKVG---SHGCVRLTNWDAEELAAMV 317


>gi|327193093|gb|EGE60003.1| hypothetical protein RHECNPAF_174007 [Rhizobium etli CNPAF512]
          Length = 371

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 83/295 (28%), Gaps = 34/295 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   ++ RL+  L  +G       +       V+ AV  +Q  + L   G  D   +  +
Sbjct: 87  DPDPAIVRLQVLLDRAG--SSPGVIDGLSGENVDKAVAGYQAMNKLPVDGRPDPDLVSRL 144

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PAASLEAVENGKVGLRSTVIVGRV 224
                  +    V+      L+++          +         E         + + + 
Sbjct: 145 E-DHSPIVATYVVSPEDATGLVDRIPEDYGEKAKMQMLGYTSVAEKLSERFHMDLDLLKA 203

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVF 282
                   +     + +P       + + +      Q   Y +D ++  +     G +  
Sbjct: 204 LNPASQFAAGDTVWVVDPGPPREGKVKRIEADRKTGQVLAYGEDGSVLAVYPATIGSKDN 263

Query: 283 VEEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYM 323
                 +  +           P   F+Q           G    + +  I+        +
Sbjct: 264 PSPSGKHKVKGVARMPVYRYDPRLNFKQGKNDKVLTIPKGPNGPVGTVWIDLTEP-TYGI 322

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           H TPEP L + V    + GCVR+ N    +L   +    P      +       K
Sbjct: 323 HGTPEPKLIDKVG---SHGCVRLTNWDAEELAGMV---KPGVPVEFVNRSPAAPK 371


>gi|304392968|ref|ZP_07374899.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303294966|gb|EFL89335.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 319

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 78/304 (25%), Gaps = 45/304 (14%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL   +   ++ RL+  L  +G       +         +A+  ++   G++  G +D
Sbjct: 31  SKPLESKDK-AAMIRLQTLLDRAG--SSPGVIDGLMGKSTSAAIAAYEAMQGMNVDGEMD 87

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLR 216
               +AM+   D   +   +               +Y  +            E       
Sbjct: 88  DEVWQAMSKDADATAQTYTITEDDAAMEPTPPTPEKYTEMAKMDKLGYHTHSEMLAEKFH 147

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID- 275
               + +              I+      +    I K  +     + + L      +   
Sbjct: 148 MDEDLLKELNPDADFTKAGTEIIVTVPGKVLDVTIAKIEVLKSSGELRALNAEGKLVFAA 207

Query: 276 ----EKGKEVFVE-----------------EVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                  +                        ++      +       G    + +  I+
Sbjct: 208 PASVGSDETPSPSGSMKVRAVAANPTYSYDPKNFGDDAGTDEKLTIPAGANGPVGTMWID 267

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
                   +H TP P   N   R  + GCVR+ N              W    + +++  
Sbjct: 268 LDKP-TYGIHGTPYPADIN---RTASHGCVRLTN--------------WDATRLAKMLTA 309

Query: 375 RKTT 378
            +TT
Sbjct: 310 GETT 313


>gi|332968505|gb|EGK07568.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. 1501(2011)]
          Length = 369

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 33/243 (13%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL---MRIK 184
             +   F   V  A++ FQ ++GL  +G +DS T   +     +  + + VN        
Sbjct: 127 GAVDGRFGENVVKALQAFQEKNGLQVTGDIDSETWNKLTEDSTINEQPVLVNYTLTDEDV 186

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L+    G ++  V    A              +  +           +    +++NP  
Sbjct: 187 TLISNPKGQQFESVLEAVAE---------KFHMSQGLLLRLNADTSFEAGNTIVVYNP-- 235

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMI---------------DEKGKEVFVEEVDWN 289
             P +I    ++A+  ++  Y  D N  ++               + + K +   +    
Sbjct: 236 YQPNAIPVHRVVAVKSKNLLYAYDENDTLVASYPTTMGSVYKPSPNGEYKVLSRIKDPTY 295

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           + +  N      PG  N +    I   ++ +  +H +P P   +      +SGCVR+ N 
Sbjct: 296 NKDFKNPKTALPPGPNNPVGRVWIGI-NKRSYGIHGSPNPERISRQN---SSGCVRLTNW 351

Query: 350 IDL 352
             L
Sbjct: 352 DAL 354


>gi|46204583|ref|ZP_00209472.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 259

 Score =  127 bits (318), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 2/134 (1%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLD 125
           +P  + +T  +T +A   YQ     GGW  LP       G+S  ++  LR  L ++GDL 
Sbjct: 127 LPTFTAQTFVETMRAAERYQVYAEAGGWKTLPADFAPKPGDSHPAIPSLRHHLTLTGDLP 186

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
                S  +D  + +AVK FQ RHGL  +G+    TL A+NVP ++R RQL+ +  R+  
Sbjct: 187 ADAPPSDRYDPPLVAAVKSFQARHGLPDAGIFGRLTLNALNVPAEVRQRQLRASAQRLMG 246

Query: 186 LLEQKMGLRYVLVN 199
                 G RYV VN
Sbjct: 247 -SSFAFGERYVTVN 259


>gi|93006394|ref|YP_580831.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
 gi|92394072|gb|ABE75347.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
          Length = 391

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 70/246 (28%), Gaps = 25/246 (10%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--- 184
             +   +      A++ FQM +GL  +  ++  T +A+     L  + + VN        
Sbjct: 137 GAVDGYWGKNSRKAMQAFQMANGLAVTDTLNIETWQALTKNDKLMAQPVLVNYQLTDADI 196

Query: 185 --KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             K      G               +E        +    +               ++N 
Sbjct: 197 NIKTTVIPAGAEAKSKLEGMYYETVIEGLAEKFHISESYLKALNPNAKFALGETITVYN- 255

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPE----PPN 295
                   + + +     +      D  I +       G          ++       PN
Sbjct: 256 PGNPNIKPVSRVVADKATETLYAYDDKGILVASYPTTVGSTATPSPTGTHTVAVKVHEPN 315

Query: 296 FIF--------RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           + +           PG  N + S  I      +  +H +P+P   +   R  ++GC+R+ 
Sbjct: 316 YTYTAENGSKSILPPGPNNPVGSVWIGLSKP-SYGIHGSPDPARIS---RQASAGCIRLT 371

Query: 348 NIIDLD 353
           N   L 
Sbjct: 372 NWDALA 377


>gi|227818557|ref|YP_002822528.1| exported ErfK/YbiS/YhnG family protein [Sinorhizobium fredii
           NGR234]
 gi|227337556|gb|ACP21775.1| putative exported ErfK/YbiS/YhnG family protein [Sinorhizobium
           fredii NGR234]
          Length = 327

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 31/272 (11%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            ++ RL+  L  +G       +   +   V  AV  F+   GL   G  D    E ++  
Sbjct: 53  PAIVRLQVLLDRAG--ASPGVIDGYYGENVTKAVAGFEAMQGLPVDGKPDPEVTERLSGG 110

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP-AASLEAVENGKVGLRSTVIVGRVDRQ 227
               I    ++    K L++           +         E         + + +    
Sbjct: 111 -KPVIEPYVISEDDAKGLVDSIPEDYAEQAEMEHLGYTSVEEKLSERFHMDIDLLKALNP 169

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEE 285
                      +  P      ++ + +      Q   + +D ++  +     G E     
Sbjct: 170 GSAFAVGATVSVAMPGTAKEGTVKRIEARRRAGQVLAFAEDGSVLAVYPATIGSEESPSP 229

Query: 286 VDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDT 326
              +  +           P   F+Q           G    + S  I+        +H T
Sbjct: 230 SGTHKVKGVARMPVYVYNPKVNFQQGDNSEVLELPKGPNGPVGSVWIDLTEP-TYGIHGT 288

Query: 327 PEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           PEP L +      + GC+R+ N    +L   +
Sbjct: 289 PEPSLVDK---AGSHGCIRLTNWDAEELAAMV 317


>gi|148653993|ref|YP_001281086.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148573077|gb|ABQ95136.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 399

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 82/243 (33%), Gaps = 33/243 (13%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM---RIK 184
             +   F   V  A+K+FQ +  + P+G +D  T   +     L  + + VN        
Sbjct: 157 GAVDGRFGENVIKALKVFQEKQAMKPTGQLDPETWAKLTEDPALMSQPVLVNYTLTPEDV 216

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            L++   G ++  V    A              +  +         L +    +++NP  
Sbjct: 217 TLIKNPKGQQFTTVTEAVAE---------KFHMSQGLLWRLNPDTPLEAGNTIVVYNP-- 265

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMI---------------DEKGKEVFVEEVDWN 289
             P       ++A+  ++  Y  ++   ++               D   K +   +    
Sbjct: 266 YQPNEQEVHRVVAVKAKNLLYAYNDKDELVASYPTTMGSVYKPSPDGDYKVLSRIKDPSY 325

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           + +  N      PG  N +    I   ++ +  +H +P P   +      +SGCVR+ N 
Sbjct: 326 NKDFKNPNTVLPPGPNNPVGRVWIGI-NKRSYGIHGSPNPEKISRQN---SSGCVRLTNW 381

Query: 350 IDL 352
             L
Sbjct: 382 DAL 384


>gi|190575450|ref|YP_001973295.1| putative peptidoglycan-binding ErfK/YbiS/YcfS/YnhG protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013372|emb|CAQ47006.1| putative peptidoglycan binding ErfK/YbiS/YcfS/YnhG protein
           [Stenotrophomonas maltophilia K279a]
          Length = 320

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 75/273 (27%), Gaps = 34/273 (12%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLE 163
                  R  L     LD +       D  V      AV  FQ  HGL  +G +D +T +
Sbjct: 38  GPDTAA-RSALHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGELDDATWQ 96

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVG 222
           A+       +    +    +    +           + +     VE        ++  + 
Sbjct: 97  ALQADKVTPLASYTLTSEDVAGPFQAVPKGPAAQAKLKSLGFNNVEESLGERFHASPELL 156

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGK 279
           ++      L    NRI        P     K ++       Q L      +       G 
Sbjct: 157 KLLNPGVDLSKAGNRIQVPNIAPSPLPKAAKVVVDKSDSSLQLLDAQGKVIAQVPVSSGS 216

Query: 280 EVFVEEVD--------------------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +     +                     W++ +         PG  N +    I+    +
Sbjct: 217 QHDPLPIGEWKILGVYRDPPFHYNPKLFWDARKGEK-KATLPPGPNNPVGRVWIDLSKPH 275

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
              +H TPEP          + GCVR+ N   L
Sbjct: 276 -YGLHGTPEPGHVGKTE---SHGCVRMTNWDAL 304


>gi|296284202|ref|ZP_06862200.1| ErfK/YbiS/YcfS/YnhG family protein [Citromicrobium bathyomarinum
           JL354]
          Length = 359

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 78/283 (27%), Gaps = 31/283 (10%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+ +  +  ++  L  +        +        +SA++ F+  HG+   G VD   L+
Sbjct: 79  LGDRTPEMIAVQVMLDHT--AHAPGVIDGFGGGNTDSAIRYFREAHGMSADGGVDDKLLQ 136

Query: 164 A-MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PAASLEAVENGKVGLRSTVIV 221
           A  +       R   V     K   ++       +  +        +E            
Sbjct: 137 ALFDETSGDIFRTYTVTEKDAKGPFKKLPEDFADMAEMDALGYETPLEMLAERFHMDAEF 196

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIP-RSIIQKDMMALLRQDPQYLKDNNIHMID---EK 277
            +             +++   +        I K  +           D    +       
Sbjct: 197 LQALNPDADFGKAGTKLVIVSHGNEKVAGDIAKLEVRKGEGRLVAFDDAGEIVASFPASI 256

Query: 278 GKEVFVEEVDWNSPE-----------------PPNFIFRQDPGKINAMASTKIEFYSRNN 320
           G   F       S                    P+  F   PG  N +  T I+   ++ 
Sbjct: 257 GSVEFPSPSGSMSVNTVAPEPNYTFDGDKQEWGPDGTFILPPGPNNPVGGTWIDLT-KDG 315

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTP 361
             +H TP+P          + GCVR+   N   L   + K T 
Sbjct: 316 YGIHGTPDPDFIAKGK---SHGCVRLTNWNAAALAKVIEKGTK 355


>gi|84622730|ref|YP_450102.1| hypothetical protein XOO_1073 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366670|dbj|BAE67828.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 330

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 68  SPGQIDGERGSNQKRAVSGFQAAHKIKVTGELDDATWQALQADTTPALVQYTLTDADVAG 127

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 128 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 187

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
              P +   K ++       +    +           G +     +              
Sbjct: 188 GAPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGVARNPVF 247

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +         PG  N +    I+    +   +H TPEP          + 
Sbjct: 248 KYNPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 303

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 304 GCVRLTNWD 312


>gi|58425396|gb|AAW74433.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 365

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 103 SPGQIDGERGSNQKRAVSGFQAAHKIKVTGELDDATWQALQADTTPALVQYTLTDADVAG 162

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 163 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 222

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
              P +   K ++       +    +           G +     +              
Sbjct: 223 GAPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIRRWKILGVARNPVF 282

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +         PG  N +    I+    +   +H TPEP          + 
Sbjct: 283 KYNPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 338

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 339 GCVRLTNWD 347


>gi|188578233|ref|YP_001915162.1| ErfK/YbiS/YcfS/YnhG [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522685|gb|ACD60630.1| ErfK/YbiS/YcfS/YnhG [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 271

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 9   SPGQIDGERGSNQKRAVSGFQAAHKIKVTGELDDATWQALQADTTPALVQYTLTDADVAG 68

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 69  PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 128

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
              P +   K ++       +    +           G +     +              
Sbjct: 129 GAPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGVARNPVF 188

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +         PG  N +    I+    +   +H TPEP          + 
Sbjct: 189 KYNPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 244

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 245 GCVRLTNWD 253


>gi|325924016|ref|ZP_08185599.1| hypothetical protein XGA_4655 [Xanthomonas gardneri ATCC 19865]
 gi|325545510|gb|EGD16781.1| hypothetical protein XGA_4655 [Xanthomonas gardneri ATCC 19865]
          Length = 283

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 67/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 21  SPGQIDGERGSNQKRAVSGFQAAHNIKVTGELDDATWQALQADATPALVQYTLTAADVAG 80

Query: 186 LLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
             +           +P+       E       +   + R       L      I + N  
Sbjct: 81  PFQPIPKGPAEQAKLPSLGYTSVDEALGERFHADPELLRQLNPGVDLSKAGGVIQVPNID 140

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 141 GVPPLAKPAKLVVDKSESTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKVLGVARDPVF 200

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  N +    I+    +   +H TPEP          + 
Sbjct: 201 KYNPKLFWDAKKGDQKATLPSGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 256

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 257 GCVRLTNWD 265


>gi|148653730|ref|YP_001280823.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148572814|gb|ABQ94873.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 417

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 65/250 (26%), Gaps = 29/250 (11%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV------PVDLRIRQLQVNLM 181
             +   +    + A++ FQ   GL  +  +D  T EA+         +  +   +   L 
Sbjct: 159 GAVDGYWGKNTQKAMQAFQQAQGLPVTDTLDQKTWEALLKGSGQNDNLGQKPVLISYTLK 218

Query: 182 RIKK---LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
                        G+               E        +V   +         +     
Sbjct: 219 DSDVNIKTTTIPAGVEAKSKLEGLYYESIPEALGEKFHMSVSYLKQLNPNAKFVTGETLT 278

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSP---- 291
           ++N         I + +    +Q       +N  +       G          +      
Sbjct: 279 VYN-PGRANTKAISRVVADKNQQTLYAYDKDNKLVASYPTTVGSTATPSPTGTHKVKVKV 337

Query: 292 --------EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                   +         PG  N +    I      +  +H +P+P   +   R  ++GC
Sbjct: 338 SDPNYTHTDADGKQTVLPPGPNNPVGRVWIGLDKP-SYGIHGSPDPERIS---RQASAGC 393

Query: 344 VRVRNIIDLD 353
           +R+ N   + 
Sbjct: 394 IRLTNWDAMA 403


>gi|294625916|ref|ZP_06704529.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292599768|gb|EFF43892.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 335

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 65/252 (25%), Gaps = 28/252 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 73  SPGQIDGERGSNQKRAVSGFQAAHNIKATGELDDATWQALQADTTPALVQYTLTDADVAG 132

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 133 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 192

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 193 GVPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 252

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +          G  N +    I+    +   +H TPEP          + 
Sbjct: 253 KYNPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 308

Query: 342 GCVRVRNIIDLD 353
           GCVR+ N   + 
Sbjct: 309 GCVRLTNWDVVA 320


>gi|190891428|ref|YP_001977970.1| hypothetical protein RHECIAT_CH0001822 [Rhizobium etli CIAT 652]
 gi|190696707|gb|ACE90792.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 330

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 82/295 (27%), Gaps = 34/295 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   ++ RL+  L  +G       +       V+ AV  +Q  + L      D   +  +
Sbjct: 46  DPDPAIVRLQVLLDRAG--SSPGVIDGLSGENVDKAVAGYQAMNKLPVDSRPDPDLVSRL 103

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PAASLEAVENGKVGLRSTVIVGRV 224
                  +    V+      L+++          +         E         + + + 
Sbjct: 104 EDN-SPIVATYVVSPEDATGLVDRIPEDYGEKAKMQMLGYTSVAEKLSERFHMDLDLLKA 162

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVF 282
                   +     + +P       + + +      Q   Y +D ++  +     G +  
Sbjct: 163 LNPASQFAAGDTVWVVDPGPPREGKVKRIEADRKTGQVLAYGEDGSVLAVYPATIGSKDN 222

Query: 283 VEEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYM 323
                 +  +           P   F+Q           G    + +  I+        +
Sbjct: 223 PSPSGKHKVKGVARMPVYRYDPRLNFKQGKNDKVLTIPKGPNGPVGTVWIDLTEP-TYGI 281

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           H TPEP L + V    + GCVR+ N    +L   +    P      +       K
Sbjct: 282 HGTPEPKLIDKVG---SHGCVRLTNWDAEELAGMV---KPGVPVDFVNRSPAAPK 330


>gi|31790351|gb|AAP58608.1| hypothetical protein [uncultured Acidobacteria bacterium]
          Length = 335

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 80/253 (31%), Gaps = 45/253 (17%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +A +     R  +L    +   +    +     + +N+P   L   +NGK      + VG
Sbjct: 58  QATDTNESERSDKLTGGHIETAEFAPDQ-PDIRLTLNVPTFRLTLWQNGKEVKSYYIGVG 116

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             +    I       I++NP W+ P S   ++M                       K V 
Sbjct: 117 MKEHPLDIGAREAREIIWNPAWIPPPSDWVREM-----------------------KGVS 153

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
             EV             +     N +   KI     ++  +H        +      + G
Sbjct: 154 PGEV------------IKASDPRNPLGKLKI--PLGDSYLIH--QARGWSDVGNL-VSHG 196

Query: 343 CVRVRNII--DLDV-WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK 399
           CVR+      DL    +   +   S   IE    + KT  V+  + + V   Y +    +
Sbjct: 197 CVRMPRPELYDLADKIVAARSLPVSSKRIEAAKHSFKTLVVRFDSPLSVDINYDTM-VIE 255

Query: 400 DSIIQFRDDIYGL 412
           D  +    D+YG 
Sbjct: 256 DGTLHLYPDVYGR 268


>gi|77748712|ref|NP_643674.2| hypothetical protein XAC3367 [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 328

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 65/252 (25%), Gaps = 28/252 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 66  SPGQIDGERGSNQKRAVSGFQAAHNIKATGELDDATWQALQADTTPVLVQYTLTDADVAG 125

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 126 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIEVPNID 185

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 186 GVPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 245

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +          G  N +    I+    +   +H TPEP          + 
Sbjct: 246 KYNPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 301

Query: 342 GCVRVRNIIDLD 353
           GCVR+ N   + 
Sbjct: 302 GCVRLTNWDVVA 313


>gi|122879074|ref|YP_199818.6| hypothetical protein XOO1179 [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 330

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 68  SPGQIDGERGSNQKRAVSGFQAAHKIKVTGELDDATWQALQADTTPALVQYTLTDADVAG 127

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 128 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 187

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
              P +   K ++       +    +           G +     +              
Sbjct: 188 GAPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIRRWKILGVARNPVF 247

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +         PG  N +    I+    +   +H TPEP          + 
Sbjct: 248 KYNPTLFWDAKKGEQKATLPPGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 303

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 304 GCVRLTNWD 312


>gi|332970006|gb|EGK09005.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. 1501(2011)]
          Length = 455

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 27/249 (10%), Positives = 63/249 (25%), Gaps = 24/249 (9%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---VDLRIRQLQVNL 180
                 +   +    + A++ FQ   GL  +  +D  T EA+          +    +  
Sbjct: 198 YHGVGAVDGWWGKNTQKAMQAFQQAKGLPVTNELDQKTWEALKSGEFATKPVLISYTLTD 257

Query: 181 MRIKK-LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             +     +   G                E         +   +         +     +
Sbjct: 258 SDVNIKTTKIPEGAEAKSKLEGMYYESVAEAMAEKFHMDISYLKQLNPNASFKAGETLTV 317

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSP----- 291
           +N      ++ + + +     Q        +  +       G          +       
Sbjct: 318 YN-PGRANKTTVTRVVADKNSQTLYAYDKQDKLVASYPTTVGSTATPSPTGTHKVQTKVS 376

Query: 292 -------EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                  +         PG  N +    I      +  +H +P+P   +   R  ++GC+
Sbjct: 377 DPNYTHTDGDGKQTIIPPGPNNPVGRVWIGLSKP-SYGIHGSPDPERIS---RQASAGCI 432

Query: 345 RVRNIIDLD 353
           R+ N   L 
Sbjct: 433 RLTNWDALA 441


>gi|312885582|ref|ZP_07745218.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
 gi|311301894|gb|EFQ78927.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
          Length = 468

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 101/257 (39%), Gaps = 15/257 (5%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            +  +R++ VN+ R++ +     G  Y+ +NIP+ +L+    G   +   V VG+ +   
Sbjct: 211 PEASLRRVAVNMERLRWMPVN--GRTYIQINIPSLTLKLHR-GDTDISYRVAVGKRETPA 267

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE--EV 286
            +    +  I+  P   +P +   +  +     +   ++++   + D  GK +      +
Sbjct: 268 LMASGALTSIVVGPP--VPDN---RRWLPPSISNISSVEEHGFQVYDRNGKWIDPTVANI 322

Query: 287 DWNSPEPPNFIFRQDP--GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                 P  +     P  G          +       ++      +L+       ++G +
Sbjct: 323 KMARQNPAKYKLISAPAVGPGKGSGIL-FKMNGIAGVHLLGCTGGLLYKPRQPATSNGTI 381

Query: 345 RVRNIIDLDVWLLKDTPT-WSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII 403
           ++    +L   LLK   +  S   +  V+  ++ +  +    +PV+  Y++    KD ++
Sbjct: 382 QLVQAENLADALLKGDNSLHSAEQLHRVIARKERSNYRFKKPMPVYITYLTCAV-KDGLL 440

Query: 404 QFRDDIYGLDNVHVGII 420
           +  +D+Y  D+    ++
Sbjct: 441 ETYEDVYHKDDHLASVM 457


>gi|93006461|ref|YP_580898.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
 gi|92394139|gb|ABE75414.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
          Length = 474

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 67/250 (26%), Gaps = 28/250 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV---DLRIRQLQVNLM 181
                +   +    + A+  FQ   GL  +G +D  T +A+N  +      +    +   
Sbjct: 216 ASPGAIDGGWGMNSKKALINFQTMQGLPANGKMDQKTWDALNKNIPANKPVLVTYTITED 275

Query: 182 RIKKLLEQKMGL-RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +                       +  E         V       +           + 
Sbjct: 276 DVNTNFATMPADSEAKSKMKGLYYQDIKEMFGERFHMDVRYLDKLNKNKQYKVGETITVL 335

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           N     P       ++A       Y  +++  +                   K V   ++
Sbjct: 336 NTR--APLKQRINRVVANKADKTLYAYNDDKLVATYPTTVGSDSTPSPQGTFKIVNKVKM 393

Query: 287 DWNSPEPPNFIFRQ----DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            W          ++     PG  + +    +      +  +H +P+P   +   R  ++G
Sbjct: 394 PWYKATVGEGADKKVHMLPPGPNSPVGVVWMGLSKP-SYGLHGSPKPEGIS---RQASAG 449

Query: 343 CVRVRNIIDL 352
           CVR+ N   L
Sbjct: 450 CVRLTNWDVL 459


>gi|71066012|ref|YP_264739.1| ErfK/YbiS/YcfS/YnhG protein family protein [Psychrobacter arcticus
           273-4]
 gi|71038997|gb|AAZ19305.1| possible ErfK/YbiS/YcfS/YnhG protein family [Psychrobacter arcticus
           273-4]
          Length = 473

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 67/250 (26%), Gaps = 28/250 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV---DLRIRQLQVNLM 181
                +   +    + A+  FQ   GL  +G +D  T  A+N  +      +    +   
Sbjct: 215 ASPGAIDGGWGMNSKKALINFQTMQGLPANGKMDQKTWNALNKNITANKPVLVTYTITED 274

Query: 182 RIKKLLEQKM-GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +         G             +  E         V       +           + 
Sbjct: 275 DVNTNFATMPTGSEAKSKMKGLYYQDIKEMFGERFHMDVRYLDKLNKNKQYKVGETITVL 334

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           N     P       ++A       Y  +++  +                   K V   ++
Sbjct: 335 NTR--APLKQRINRVVANKADKTLYAYNDDKLVATYPTTVGSDSTPSPQGTFKIVNKVKM 392

Query: 287 DWNSPEPPNFIFRQ----DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
            W          ++     PG  + +    +      +  +H +P+P   +   R  ++G
Sbjct: 393 PWYKATVGEGTDKKVHMLPPGPNSPVGVVWMGLSKP-SYGLHGSPKPEGIS---RQASAG 448

Query: 343 CVRVRNIIDL 352
           CVR+ N   L
Sbjct: 449 CVRLTNWDVL 458


>gi|325927923|ref|ZP_08189147.1| hypothetical protein XPE_3188 [Xanthomonas perforans 91-118]
 gi|325541763|gb|EGD13281.1| hypothetical protein XPE_3188 [Xanthomonas perforans 91-118]
          Length = 309

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 65/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 47  SPGQIDGERGSNQKRAVSGFQAAHNIKATGELDDATWQALQADTTPALVQYTLTDADVAG 106

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   +         L    + I + N  
Sbjct: 107 PFKPIPKGPAEQAKLTALGYASVDEALGERFHADPALLAQLNPGVDLSKAGSVIQVPNID 166

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       + L  +           G +     +              
Sbjct: 167 GVPPLAKPAKLVVDKSDSTLRLLDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 226

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  N +    I+    +   +H TPEP          + 
Sbjct: 227 KYNPKLFWDAKKGDQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 282

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 283 GCVRLTNWD 291


>gi|294665945|ref|ZP_06731210.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292604300|gb|EFF47686.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 335

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 65/252 (25%), Gaps = 28/252 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 73  SPGQIDGERGSNQKRAVSGFQAAHNIKATGELDDATWQALQADTTPALVQYTLTDADVAG 132

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 133 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 192

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 193 GVPPLAKPAKLVVDRSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 252

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +          G  N +    I+    +   +H TPEP          + 
Sbjct: 253 KYNPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 308

Query: 342 GCVRVRNIIDLD 353
           GCVR+ N   + 
Sbjct: 309 GCVRLTNWDVVA 320


>gi|89071145|ref|ZP_01158340.1| hypothetical protein OG2516_12809 [Oceanicola granulosus HTCC2516]
 gi|89043302|gb|EAR49526.1| hypothetical protein OG2516_12809 [Oceanicola granulosus HTCC2516]
          Length = 327

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 75/267 (28%), Gaps = 34/267 (12%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAY----VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            L  +L +   LD +       D       ESA++ F+ R G    G +D+   +A+   
Sbjct: 52  ALTAKLQVL--LDRAAISPGVIDGRKGGMTESALRAFERREGFPEDGALDADVWQALQSD 109

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP-AASLEAVENGKVGLRSTVIVGRVDRQ 227
                    +       +++        L  +       A E         V   +    
Sbjct: 110 GPALTASYTITEQDHANIVDSLPEDYARLAEMDWLGYTSAAEKIAEDFHMDVDFLQAMNP 169

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN----NIHMIDEKGKEVFV 283
                      +  P       + + ++     +   Y        N  +     +    
Sbjct: 170 ASSFAVGDEITVMQPAGRQEGEVARIEIDKPNSRLVAYDGSGAVLVNYPVAVGSDQTPSP 229

Query: 284 E--------EVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDT 326
                     V+      P+  F+Q          PG    +    I+        +H T
Sbjct: 230 SGTHEVVAVAVEPTYSYLPDTNFQQGDNDEPLTLPPGPNGPVGLVWIDLSKP-TYGLHGT 288

Query: 327 PEP-ILFNNVVRFETSGCVRVRNIIDL 352
           P+P  LFN     ++ GCVR+ N   L
Sbjct: 289 PDPASLFN----AQSHGCVRMTNWDAL 311


>gi|21232639|ref|NP_638556.1| hypothetical protein XCC3210 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767252|ref|YP_242014.1| hypothetical protein XC_0920 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990367|ref|YP_001902377.1| conserved exported protein [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21114444|gb|AAM42480.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572584|gb|AAY47994.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732127|emb|CAP50319.1| conserved exported protein [Xanthomonas campestris pv. campestris]
          Length = 324

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 67/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + A+  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 62  SPGQIDGQRGSNQKRAISGFQAAHRIKVTGELDDATWQALQADTTPALVQYTLTDADVAG 121

Query: 186 LLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +           +PA   +   E       +   + R       L    + I      
Sbjct: 122 PFQPIPDRPAEQAKLPALGYVSIEEALGERFHADPDLLRQLNPGVDLSKAGSVIQAPNVD 181

Query: 245 VIPR-SIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            +P  S   K ++       +                G +     +              
Sbjct: 182 GVPALSKPAKLVIDKSDSTLRLFDAQGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPKF 241

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +P        PG  N +    I+    +   +H TPEP          + 
Sbjct: 242 HYNPKLFWDAKPGEGKATLPPGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 297

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 298 GCVRLTNWD 306


>gi|194366782|ref|YP_002029392.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349586|gb|ACF52709.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 318

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 70/271 (25%), Gaps = 34/271 (12%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYV----ESAVKLFQMRHGLDPSGMVDSSTLE 163
              V   R  L     LD +       D  V      AV  FQ  HGL  +G VD  T +
Sbjct: 36  GPDVGP-RSALHAQVLLDRANFSPGQIDGEVGSNQRRAVSGFQAAHGLTVTGEVDDPTWK 94

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           A+       +    +    +    +    G                E       ++  + 
Sbjct: 95  ALQADTVEPLASYTLTSEDVAGPFQAIPKGPAAQARLKSLGFSSVEEALGERFHASPELL 154

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGK 279
           +       L    +RI              K ++       Q L      +       G 
Sbjct: 155 KALNPGIDLAKAGSRIQVPNIAPAALPKAAKIVVDKSDSTLQLLDAQGKLIAQVPVSSGS 214

Query: 280 EVFVEEVD--------------------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           +     +                     W++ +         PG  N +    I+    +
Sbjct: 215 QHDPLPIGEWKILGVYRDPPFHYNPKLFWDARKGEK-KATLPPGPNNPVGRVWIDLSKPH 273

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              +H TPEP          + GCVR+ N  
Sbjct: 274 -YGLHGTPEPGHVGKTE---SHGCVRMTNWD 300


>gi|78049042|ref|YP_365217.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037472|emb|CAJ25217.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 335

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 65/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 73  SPGQIDGERGSNQKRAVSGFQAAHNIKATGELDDATWQALQADTTPALVQYTLTDADVAG 132

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   +         L    + I + N  
Sbjct: 133 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLAQLNPGVDLSKAGSVIQVPNID 192

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       + L  +           G +     +              
Sbjct: 193 GVPPLAKPAKLVVDKSDSTLRLLDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 252

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  N +    I+    +   +H TPEP          + 
Sbjct: 253 KYNPKLFWDAKKGDQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 308

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 309 GCVRLTNWD 317


>gi|325916883|ref|ZP_08179131.1| hypothetical protein XVE_3111 [Xanthomonas vesicatoria ATCC 35937]
 gi|325536928|gb|EGD08676.1| hypothetical protein XVE_3111 [Xanthomonas vesicatoria ATCC 35937]
          Length = 271

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 68/249 (27%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  +G +D +T +A+       + Q  +    +  
Sbjct: 9   SPGQIDGERGSNQKRAVSGFQAAHNIKVTGELDDATWQALQADSTPALVQYTLTDADVAG 68

Query: 186 LLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPY 243
             +           +P+       E+      +   + R       +  +     + N  
Sbjct: 69  PFQPIPKGPAEQAKLPSLGYTSVDESLGERFHADPALLRQLNPGVDLGKAGGVIQVPNVD 128

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 129 GVAPLAKPAKLVVDKSESTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGISRDPVF 188

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  N +    I+    +   +H TPEP          + 
Sbjct: 189 KYNPKLFWDAKKGDQKATLPSGPNNPVGRVWIDLSKPH-YGLHGTPEPGHVGKTE---SH 244

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 245 GCVRLTNWD 253


>gi|209549005|ref|YP_002280922.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534761|gb|ACI54696.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 332

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 34/296 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   ++ RL+  L  +G       +       V  AV  F+  + L   G  D   +  +
Sbjct: 46  DPDPAIVRLQVLLDRAG--ASPGVIDGLTGENVNKAVAGFEAMNKLPIDGRPDPDVVSRL 103

Query: 166 NVPVDLRI-RQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGR 223
                + I     V+    K L+++          + +       E         + +  
Sbjct: 104 EEGAQIPIVESYVVSADDAKDLVDRIPEDYGEKAKMQSLGYTSVAEKLSERFHMGIDLLN 163

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEV 281
                          + NP       + + +      Q   Y +D  +  +     G E 
Sbjct: 164 ALNPASQFAPGDTVWVVNPGPPRKGKVKRIEADRKTGQVLAYAEDGALLAVYPATIGSED 223

Query: 282 FVEEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTY 322
                  +  +           P   F+Q           G    + +  I+        
Sbjct: 224 NPAPSGKHKVKGVARMPVYRYDPKRNFKQGKNDKVLTIPKGPNGPVGTVWIDLTEP-TYG 282

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           +H TPEP L + V    + GCVR+ N  + +L   +    P      ++      K
Sbjct: 283 IHGTPEPKLIDKVG---SHGCVRLTNWDVEELAGMV---KPGVLVDFVDRSSAAPK 332


>gi|307946679|ref|ZP_07662014.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770343|gb|EFO29569.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 97

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 1/91 (1%)

Query: 331 LFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHF 390
           +FN   R  + GC+RV    DL   LL     +S+  +E++   +K T +KL   + VH 
Sbjct: 1   MFNRAQRDFSHGCIRVAKPFDLGDVLLSP-EGYSKGKLEKIRDGQKRTVIKLNKPLKVHL 59

Query: 391 VYISAWSPKDSIIQFRDDIYGLDNVHVGIIP 421
            Y++AW  KD    FR DIY  D V +  + 
Sbjct: 60  TYLTAWMNKDGSTHFRRDIYSRDAVLLKALR 90


>gi|289667983|ref|ZP_06489058.1| hypothetical protein XcampmN_05628 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 335

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 65/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  SG +D +T +A+       + Q  +    +  
Sbjct: 73  SPGQIDGERGSNQKRAVSGFQAAHNIKVSGELDDATWQALQADTTPALVQYTLTDADVAG 132

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 133 PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 192

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 193 GVPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGVARDPVF 252

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  + +    I+    +   +H TPEP          + 
Sbjct: 253 KYNPKLFWDAKKGDQKATLPAGPNSPVGRVWIDLSKPH-YGLHGTPEPGHVGKTQ---SH 308

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 309 GCVRLTNWD 317


>gi|289662184|ref|ZP_06483765.1| hypothetical protein XcampvN_03553 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 293

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 65/249 (26%), Gaps = 28/249 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     +  + AV  FQ  H +  SG +D +T +A+       + Q  +    +  
Sbjct: 31  SPGQIDGERGSNQKRAVSGFQAAHNIKVSGELDDATWQALQADTTPALVQYTLTDADVAG 90

Query: 186 LL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPY 243
                  G                E       +   + R       L    + I + N  
Sbjct: 91  PFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSKAGSVIQVPNID 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD------------- 287
            V P +   K ++       +    +           G +     +              
Sbjct: 151 GVPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRWKILGVARDPVF 210

Query: 288 ------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                 +   +  +       G  + +    I+    +   +H TPEP          + 
Sbjct: 211 KYNPKLFWDAKKGDQKATLPAGPNSPVGRVWIDLSKPH-YGLHGTPEPGHVGKTQ---SH 266

Query: 342 GCVRVRNII 350
           GCVR+ N  
Sbjct: 267 GCVRLTNWD 275


>gi|260467449|ref|ZP_05813619.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259028785|gb|EEW30091.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 334

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 74/275 (26%), Gaps = 34/275 (12%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +          AV  +Q  +GL   G +   T + +      R   +   L     
Sbjct: 59  SPGLIDGRLSENFAKAVGAYQTANGLQADGKLTRETWDKLIA-ASARPALIAYELAPKDV 117

Query: 186 LLEQKMGLRYVLVNIPA----ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR-IMF 240
                  +   +  + +        A+E        +  + ++              ++ 
Sbjct: 118 RGPFTKRIPARMEKMASLRRLGYRNAMERLAERFHVSEKLLKMLNPGATFRKAGTMLMVP 177

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM-------------IDEKGKEVFVEEVD 287
           +     P + I    +    +  + L  +   +                   EV     +
Sbjct: 178 DVGRGDPPAAIAGVEVDKGARVVRVLDASGKWLAVYPASIGSDEKPAPSGTAEVRRVVHN 237

Query: 288 WNSPEPPNF---------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                 P F          F    G  N + S  I+     +  +H TPEP         
Sbjct: 238 PTYHYDPKFAFKGIRTKRPFTIAAGPNNPVGSVWIDLSIE-SYGIHGTPEPGKIGTT--- 293

Query: 339 ETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEV 371
            + GC+R+ N    DL   + + T    +  + +V
Sbjct: 294 FSHGCIRLTNWDAEDLASMVQEGTTVNFKDEMADV 328


>gi|197106602|ref|YP_002131979.1| hypothetical protein PHZ_c3141 [Phenylobacterium zucineum HLK1]
 gi|196480022|gb|ACG79550.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 358

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 66/253 (26%), Gaps = 35/253 (13%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +  A    + +AV  F+   GL   G +D+     +       +    +    +  
Sbjct: 86  SPGVIDGADGENLMNAVAAFERARGLPEDGRLDAEVWALLVRDTRPVVTDYVITEADVAG 145

Query: 186 LLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
              +++   Y  +            E           +               RI+    
Sbjct: 146 PFTEEIPSDYEEMAELDALGFTSPREALAEKFHMDESLLAALNPGADFSVAGTRIVVAAP 205

Query: 244 W--VIPRSIIQKDMMALLRQDPQYLKDN------------------------NIHMIDEK 277
               +P  +   ++     Q   Y  D                         N+   D  
Sbjct: 206 GPETLPAPVTLVEVDKSRNQVRAYGADGALLASYPATVGSSDMPTPDGEWAVNLVAYDPH 265

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                 +++++          +  PG  N + +  I+   +    +H  PEP L      
Sbjct: 266 WN-YDPDKLNFGDKSAGKLDIK--PGPNNPVGAVWIDLT-KETYGIHGAPEPRLVGKT-- 319

Query: 338 FETSGCVRVRNII 350
             + GCVR+ N  
Sbjct: 320 -ASHGCVRLTNWD 331


>gi|121606471|ref|YP_983800.1| ErfK/YbiS/YcfS/YnhG family protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120595440|gb|ABM38879.1| ErfK/YbiS/YcfS/YnhG family protein [Polaromonas naphthalenivorans
           CJ2]
          Length = 344

 Score =  116 bits (290), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 71/276 (25%), Gaps = 30/276 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G    +V  LR ++++         +  AF A +   V  FQ  +G   +G +D  
Sbjct: 59  VLAQGARGEAV--LRAQILLDHAWFSPGEIDGAFGANMRRMVAAFQTANGQKSTGRIDGE 116

Query: 161 TLEAMNVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRST 218
           T +A+        + +  +          +          + +      +E        +
Sbjct: 117 TWKALAGDAPAPVLSEYTITAEDAAGPYARLPADMMKRAQLKSLGYETLLEALGEKFHCS 176

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--- 275
               R   +     +    I+  P      +      +         L      +     
Sbjct: 177 PKWLRDANRGHTFKAGDKIIVPAPGSDKAPAGAASIRIDKSEHVLYLLDKAERPVAAFPI 236

Query: 276 EKGKEVFVEEVDWNSPEPP-------------------NFIFRQDPGKINAMASTKIEFY 316
             G       +     +                     +       G  N +    +   
Sbjct: 237 SMGGASDPLPIGRMEIKNAAKDPVFTFNPALLKGTKKTDTKAIIPAGPNNPVGVYWLGLS 296

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             +   +H TPEP    +     ++GC+ + N   L
Sbjct: 297 KAHW-GIHGTPEPERVGSSE---SNGCIHLTNWDVL 328


>gi|119384838|ref|YP_915894.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
 gi|119374605|gb|ABL70198.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
          Length = 493

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 66/243 (27%), Gaps = 29/243 (11%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVL 197
           ESA+  FQ R GL  +G +D +  + +       +     +       L+++        
Sbjct: 106 ESAIMAFQRRSGLPMTGRMDHAVWDLLQGYAAAPLTTAYTITDEDTTGLVDRIPSDYAEK 165

Query: 198 VNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
             +        +E                                P   I  ++ +  + 
Sbjct: 166 AAMTSQGYTSVLEKLAERFHMDEKFLAKMNPGAAFRPGETIHATVPAKPIRATVTRIIVD 225

Query: 257 ALLRQDPQYLKDNNIHMIDE------------KGKEVFVEEVDWNSPEPPNFIFRQ---- 300
              R+   Y    N+                     V    ++      P+  F+Q    
Sbjct: 226 KETRRVAAYDAKGNMVADYPATVGSADTPSPHGNHVVDAVALNPTYTYNPHRNFKQGQND 285

Query: 301 -----DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
                 PG    + +  I+        +H T  P     +   ++ GCVR+ N    +L 
Sbjct: 286 RVLTIPPGPNGPVGNVWIDLSEP-TYGIHGTATPS---QLFLNQSHGCVRLTNWDAWELA 341

Query: 354 VWL 356
             +
Sbjct: 342 HMV 344


>gi|114707249|ref|ZP_01440147.1| hypothetical protein FP2506_05061 [Fulvimarina pelagi HTCC2506]
 gi|114537445|gb|EAU40571.1| hypothetical protein FP2506_05061 [Fulvimarina pelagi HTCC2506]
          Length = 485

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 95/353 (26%), Gaps = 45/353 (12%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG 105
              ++      A +     S +     E+    E+     Q I      P++        
Sbjct: 149 PQPDESM-GPQAELPAPDASIVTDGPTESANPLEQPFQE-QTIEETDPAPQVATPQGE-- 204

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---LDPSGMVDSSTL 162
           +   +V  L+  L  +G       +     + V  AV  ++ + G         V +  L
Sbjct: 205 DKKAAVAALQVILDRAGM--SPGVIDGRMGSNVNKAVAAYEEKFGRKLSTGDSRVLAEML 262

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV-NIPAASL-EAVENGKVGLRSTVI 220
           +    P    ++  ++    +      ++   Y     +PA S    VE           
Sbjct: 263 DESGGPA---VKTYELTAEDVAGPYVAQIPTDYAEKAKLPAMSFERPVEKLAEKFHMDEA 319

Query: 221 VGRVDRQTPILHSRINRI-MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---- 275
             +             RI + N    +   + +        Q   Y     +        
Sbjct: 320 YLKEINPGADFSRAGTRIKVMNVGENVDGKVARIVADKGREQVRVYDALGELIAAYPSTI 379

Query: 276 --------EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSR 318
                       +V     D N    P   F+Q          PG    + S  I     
Sbjct: 380 GSASTPSPSGTVQVNRIAFDPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGSIWIALSKP 439

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
               +H TPEP          + GCVR+ N    +L   +    P  +   +E
Sbjct: 440 -TYGIHGTPEPSKIGKTN---SHGCVRLTNWDAYELAKMVR---PGVTVEFVE 485


>gi|326562620|gb|EGE12931.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 46P47B1]
          Length = 356

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 81/280 (28%), Gaps = 43/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV---DLRIRQLQVNLM 181
                +   +    + A+  FQ   GL+P+G ++ +T +A+N  +      +    +   
Sbjct: 97  ASPGPIDGGWGMNSKKALMNFQKIKGLEPTGKMNQATWDALNQNIATNQPVLVSYTITEA 156

Query: 182 RIKKLLEQKMGL-RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
             K   +                     E         V   +         +  +  + 
Sbjct: 157 DAKGPYKTLPNDAESRSKLKALGYESIQEMLGERFHMDVAYLKKLNPNKRFVAGESITVI 216

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           N     P   +   ++A  +    Y    +  +                 K K +   ++
Sbjct: 217 NTG--KPFEGVVTRVVADRKDKILYAYHEDQLVATYPTTVGGEASTTPGGKYKIINKVKM 274

Query: 287 DWNSP-----EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                     +  N ++   PG  + +    +   ++ +  +H +P P   +   R  + 
Sbjct: 275 PTYKATVNRDDEDNKVYYLPPGPNSPVGVVWMGL-NKPSYGIHGSPIPEGIS---RQSSL 330

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           GC+R+ N              W    +  V++   T  ++
Sbjct: 331 GCIRLTN--------------WDVLELVAVIENGATVEIR 356


>gi|326560456|gb|EGE10838.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 7169]
 gi|326561659|gb|EGE11996.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 103P14B1]
 gi|326564212|gb|EGE14448.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 12P80B1]
 gi|326565811|gb|EGE15973.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC1]
 gi|326570464|gb|EGE20504.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC8]
 gi|326571148|gb|EGE21172.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis BC7]
 gi|326573440|gb|EGE23408.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis 101P30B1]
 gi|326575663|gb|EGE25586.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis CO72]
 gi|326577128|gb|EGE27022.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis O35E]
          Length = 353

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 81/280 (28%), Gaps = 43/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV---DLRIRQLQVNLM 181
                +   +    + A+  FQ   GL+P+G ++ +T +A+N  +      +    +   
Sbjct: 94  ASPGPIDGGWGMNSKKALMNFQKIKGLEPTGKMNQATWDALNQNIATNQPVLVSYTITEA 153

Query: 182 RIKKLLEQKMGL-RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
             K   +                     E         V   +         +  +  + 
Sbjct: 154 DAKGPYKTLPNDAESRSKLKALGYESIQEMLGERFHMDVAYLKKLNPNKRFVAGESITVI 213

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           N     P   +   ++A  +    Y    +  +                 K K +   ++
Sbjct: 214 NTG--KPFEGVVTRVVADRKDKILYAYHEDQLVATYPTTVGGEASTTPGGKYKIINKVKM 271

Query: 287 DWNSP-----EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                     +  N ++   PG  + +    +   ++ +  +H +P P   +   R  + 
Sbjct: 272 PTYKATVNRDDEDNKVYYLPPGPNSPVGVVWMGL-NKPSYGIHGSPIPEGIS---RQSSL 327

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           GC+R+ N              W    +  V++   T  ++
Sbjct: 328 GCIRLTN--------------WDVLELVAVIENGATVEIR 353


>gi|323701941|ref|ZP_08113610.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533027|gb|EGB22897.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 314

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 83/263 (31%), Gaps = 78/263 (29%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  V+ L+  L + G       ++  +D   + AV+ FQ  H L   G+VD  T  
Sbjct: 48  PLMQGEDVKNLQLELQVLGYY--QGPINGIYDFLTQKAVQQFQADHRLKADGVVDEPTWY 105

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            M        RQ+++ + + + L     G   ++++     L  + +GK   +  +  G 
Sbjct: 106 QM-------ARQIELPVTKSETLPP-PTGQIALIIDTTKRKLTVMADGKPYKQFNIACGA 157

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            +  +P+   +                                              V  
Sbjct: 158 PETPSPVGSWQ----------------------------------------------VAH 171

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSG 342
           + ++W                 +   +  +        Y +H T +P        + + G
Sbjct: 172 KAINW----------------GDGFGTRWLGLNVPWGIYGIHGTNKPFSIGT---YASHG 212

Query: 343 CVRVRN--IIDLDVWLLKDTPTW 363
           C+R+ N  + +L  W+ K TP +
Sbjct: 213 CIRMHNSSVEELYPWVPKGTPVY 235



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++  L   G       +   F   +E AVK F+  +GL     V+   
Sbjct: 251 LVQGDRGADVYEVQRTLKRLGYYK--AEVDGIFGYQMEQAVKKFRKANGLPMDNQVNEVM 308

Query: 162 LEAMN 166
            +A+ 
Sbjct: 309 YQALG 313


>gi|296113079|ref|YP_003627017.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis RH4]
 gi|295920774|gb|ADG61125.1| ErfK/YbiS/YcfS/YnhG family protein [Moraxella catarrhalis RH4]
          Length = 343

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 81/280 (28%), Gaps = 43/280 (15%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV---DLRIRQLQVNLM 181
                +   +    + A+  FQ   GL+P+G ++ +T +A+N  +      +    +   
Sbjct: 84  ASPGPIDGGWGMNSKKALMNFQKIKGLEPTGKMNQATWDALNQNIATNQPVLVSYTITEA 143

Query: 182 RIKKLLEQKMGL-RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
             K   +                     E         V   +         +  +  + 
Sbjct: 144 DAKGPYKTLPNDAESRSKLKALGYESIQEMLGERFHMDVAYLKKLNPNKRFVAGESITVI 203

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID--------------EKGKEVFVEEV 286
           N     P   +   ++A  +    Y    +  +                 K K +   ++
Sbjct: 204 NTG--KPFEGVVTRVVADRKDKILYAYHEDQLVATYPTTVGGEASTTPGGKYKIINKVKM 261

Query: 287 DWNSP-----EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                     +  N ++   PG  + +    +   ++ +  +H +P P   +   R  + 
Sbjct: 262 PTYKATVNRDDEDNKVYYLPPGPNSPVGVVWMGL-NKPSYGIHGSPIPEGIS---RQSSL 317

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           GC+R+ N              W    +  V++   T  ++
Sbjct: 318 GCIRLTN--------------WDVLELVAVIENGATVEIR 343


>gi|254489520|ref|ZP_05102723.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
 gi|214042027|gb|EEB82667.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
          Length = 316

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 78/280 (27%), Gaps = 35/280 (12%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            S    +L+  L  +G       +        ESA++ F+ R GL+  G++D     A+ 
Sbjct: 38  QSAITVKLQVLLDQAG--ISPGVIDGYSGGMSESALRGFEAREGLEVDGVLDPEVWAALG 95

Query: 167 VP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PAASLEAVENGKVGLRSTVIVGRV 224
                  ++   +    +  L  +          +         E             ++
Sbjct: 96  GSNGGAILQSYTLTQEDLSNLSAEIPDNVAEKAKMEMLGFTRVTEALAERFHMDEDFLKL 155

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN----NIHMIDEKGKE 280
                         + +    +  +  + ++    ++   +  +     N  +     + 
Sbjct: 156 LNPDAAFAEGDTITVTDTGPDLEGAGARIEIRKSEQRAVVFDAEGNMLTNYPVAIGSKET 215

Query: 281 -------------VFVE-----EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
                        +         V++ + +         PG    + S  I+        
Sbjct: 216 PSPEGSLEVTAVAIDPTYSYRPSVNFEA-DGVKEELTLPPGPNGPVGSVWIDLSKP-TYG 273

Query: 323 MHDTPEPI-LFNNVVRFETSGCVRVRNII--DLDVWLLKD 359
           +H T  P  LF+      + GCVR  N    +L   + K 
Sbjct: 274 LHGTSAPAKLFS----ASSHGCVRFTNWDVKELAHMVSKG 309


>gi|150397326|ref|YP_001327793.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150028841|gb|ABR60958.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 463

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 86/340 (25%), Gaps = 53/340 (15%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           + +P +S+E     +     Y + L++   P  P   +  G SS  +  L+  L   G  
Sbjct: 151 NSLPSLSEEAAYDPQ-----YDNPLAQ---PMPPAMTVK-GKSSAEIAALQVFLDREGF- 200

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                +     + V  A++ +Q   G           LE +     L I    +      
Sbjct: 201 -SPGVIDGKMGSNVTKAIEAWQQATGETLDPNNTEDILERLRFNGGLPITTYTITAADAA 259

Query: 185 KLLEQKMGLRYV-LVNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                 +   Y     +P  +     E             R              I    
Sbjct: 260 GPFVASIPEDYAHKAQLPHLSFTSVTEMLGEKFHMDEAYLRELNPGADFSIPGTTIKVVN 319

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE-------------VFVEEVDWN 289
                +  + + +    R+      +    +                    V     D  
Sbjct: 320 PGAYKKGKVARIVADKGRKQVLAYDEAGQLLAAYPATIGSADTPSPSGTVNVERIAFDPG 379

Query: 290 SPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
               P   F+Q          PG    + +  I         +H TPEP          +
Sbjct: 380 YTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKP-TYGIHGTPEPSKIGKTQ---S 435

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
            GC+R+ N              W    + ++V T  T   
Sbjct: 436 HGCIRLTN--------------WDATELGKMVSTGVTVEF 461


>gi|188579749|ref|YP_001923194.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179343247|gb|ACB78659.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 364

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 67/264 (25%), Gaps = 40/264 (15%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIK 184
               +       +  A+K F    GL     +     + +     +  + Q  +    +K
Sbjct: 91  SPGAIDGRDGENLRGAIKAFAAAQGLPEGDRLTREVFDRLQATSKEPVVTQYTITDEDVK 150

Query: 185 KLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               ++M  +        P       E           +         L      ++   
Sbjct: 151 GPFVERMPTKMEEQAEVGPMRYTNTREMLAERFHMQRDLLSALNPDVPLDKAGGTLVVAA 210

Query: 243 YW----------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI-------------DEKGK 279
                        +   + + ++    ++   + +D  +                D   K
Sbjct: 211 VPPLGEGKVEGAPVAPKVTRIEVDKRTKRVRAFGEDGKLTADYPASIGSDEKPAPDGSAK 270

Query: 280 EVFVEEVDWNSPEPP--------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
              V    W +  P            F   PG  N +    I+     +  +H TP+P  
Sbjct: 271 VKAVAFDPWYTYNPKYRFKGVKATKKFSIHPGPNNPVGLVWIDLSIP-SYGIHGTPDPEK 329

Query: 332 FNNVVRFETSGCVRVRN--IIDLD 353
                   + GC+R+ N    DL 
Sbjct: 330 VGKTE---SHGCIRLTNWDARDLA 350


>gi|257453390|ref|ZP_05618685.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
 gi|257449142|gb|EEV24090.1| ErfK/YbiS/YcfS/YnhG family protein [Enhydrobacter aerosaccus SK60]
          Length = 439

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 77/243 (31%), Gaps = 33/243 (13%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--- 184
             ++   +     A+++FQ +H L  +  ++ +T  A+     L  + + +N    +   
Sbjct: 197 GAVTGIMNKNTIKAMQIFQQKHNLPVTTTMNEATWSALTSNETLNKQPIFINYQLTRDDL 256

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            + +    ++Y       A              +  +      T  L +     ++NP  
Sbjct: 257 VITKVPRDMQYKSAREAVAE---------KFHMSQKLVSRLNPTTPLKAGNIITVYNP-- 305

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV---------------FVEEVDWN 289
             P       +++  +++  Y    +  ++      V                       
Sbjct: 306 YQPNMTEVTKVVSDKKKNILYAYAASGELVASYPTTVGSNYTPSPSGTLKVKNRVLNPTY 365

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           + +  +      PG  N +    I    +    +H +PEP L +      + GCVR+ N 
Sbjct: 366 NTDFSSKEKWLPPGPNNPVGRAWIGLS-KRGYGIHGSPEPELISAQK---SHGCVRLTNW 421

Query: 350 IDL 352
             L
Sbjct: 422 DAL 424


>gi|319784207|ref|YP_004143683.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170095|gb|ADV13633.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 334

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 69/270 (25%), Gaps = 34/270 (12%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
                AV  FQ  +GL   G +   T + +      R      +L R          +  
Sbjct: 69  ENFTRAVSAFQAANGLPADGKLTRETWDKLVAT-SSRPAIETYDLTRKDVHGPFTRRIPA 127

Query: 196 VLVNIP----AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSI 250
            +  +      A   A+E        +  +               + ++       P   
Sbjct: 128 RMERMARLPRLAYHNALEKMAERFHISEQLLERLNPGIGFRKAGQKLLVPAVTRGDPPQD 187

Query: 251 IQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPE--------------- 292
           I    +    +  + L  +   +       G +           +               
Sbjct: 188 IASVEVDKSARQVRVLDPSGKVLATYPASIGSQEKPAPSGQAEVKRVVHHPTYHYDPEFA 247

Query: 293 ----PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                    F    G  N + S  I+    ++  +H TP+P          + GC+R+ N
Sbjct: 248 FKGVRSKRPFTIAAGPNNPVGSVWIDLSI-DSYGIHGTPDPGKIGKT---FSHGCIRLTN 303

Query: 349 --IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
               DL   + K T    +      V+   
Sbjct: 304 WDAEDLASEVQKGTKVVFKDEAAGSVEQGS 333


>gi|218528492|ref|YP_002419308.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218520795|gb|ACK81380.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 369

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 73/282 (25%), Gaps = 42/282 (14%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              + +++  L  +        +       +  A+K F    GL     +     + +  
Sbjct: 80  DPLLVKVQVLLDRTRF--SPGAIDGRDGENLRGALKAFAAAQGLPEGDRLTREVFDRLQA 137

Query: 168 PVDLR-IRQLQVNLMRIKKLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRV 224
                 + Q  +    +K    +KM  +        P     A E           +   
Sbjct: 138 TGKEPVVTQYTITEEDVKGPFVEKMPAKMEEQAEVGPMRYTNAREMLAERFHMQRDLFSA 197

Query: 225 DRQTPILHSRINRIMFNPYW----------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
                 L      ++                +   + + ++    ++   + +D  +   
Sbjct: 198 LNPNVPLDKAGGTLVVAAVPPLGEGKVEGAPVAPKVTRIEVDKRTKRVRAFAEDGKLTAD 257

Query: 275 -------------DEKGKEVFVEEVDWNSPEPP--------NFIFRQDPGKINAMASTKI 313
                        D   K   V    W +  P            F   PG  + +    I
Sbjct: 258 YPASIGSSEKPAPDGSAKVKAVAFDPWYTYNPKYQFKGVKATKKFSIHPGPNSPVGVVWI 317

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
           +     +  +H TPEP          + GC+R+ N    DL 
Sbjct: 318 DLSIP-SYGIHGTPEPEKVGKTE---SHGCIRLTNWDARDLA 355


>gi|254559097|ref|YP_003066192.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           DM4]
 gi|254266375|emb|CAX22139.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           DM4]
          Length = 364

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 67/264 (25%), Gaps = 40/264 (15%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
               +       +  A+K F    GL     +     + +        + Q  +    +K
Sbjct: 91  SPGAIDGRDGENLRGALKAFAAAQGLPEGDRLTREIFDRLQATGKEPVVTQYTITEEDVK 150

Query: 185 KLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +KM  +        P     A E           +         L      ++   
Sbjct: 151 GPFVEKMPPKMEEQAEVGPMRYTNAREMLAERFHMQRDLFSALNPNVPLDKAGGTLVVAA 210

Query: 243 YW----------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI-------------DEKGK 279
                        +   + + ++    ++   + +D  +                D   K
Sbjct: 211 VPPLGEGKVEGAPVAPKVTRIEVDKRTKRVRAFAEDGKLTADYPASIGSSEKPAPDGSAK 270

Query: 280 EVFVEEVDWNSPEPP--------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
              V    W +  P            F   PG  + +    I+     +  +H TPEP  
Sbjct: 271 VKAVAFDPWYTYNPKYQFKGVKATKKFSIHPGPNSPVGVVWIDLSIP-SYGIHGTPEPEK 329

Query: 332 FNNVVRFETSGCVRVRN--IIDLD 353
                   + GC+R+ N    DL 
Sbjct: 330 VGKTE---SHGCIRLTNWDAHDLA 350


>gi|260467165|ref|ZP_05813343.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259029089|gb|EEW30387.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 505

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 74/296 (25%), Gaps = 40/296 (13%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG--LDPSGMVD 158
            L LG     V  L+  L   G       +   F + V+ A+  +    G  L  +  V 
Sbjct: 211 SLSLGAR-QDVAALQVLLDRGG--ASPGVIDGRFGSNVDKALAAYNEISGSNLKSTDAVG 267

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA--SLEAVENGKVGLR 216
                A+            +            +   Y               E       
Sbjct: 268 IQ--AALAQSGGDAFANYTITPEDAAGPYVASIPEDYSQKAQLDRMGYTSVPEALAERFH 325

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
                 +   +    +     I    +  +  + + + +    +++          +   
Sbjct: 326 MDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPVARIVADKGKKEVYAYDAGGKLVAAY 385

Query: 277 KG-------------KEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIE 314
                            V    +D N    PN  F+Q          PG    + S  I 
Sbjct: 386 PATIGSADTPSPTGIHTVSRIALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWIA 445

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHI 368
                   +H TPEP          + GCVR+ N    +L   +   +P  +   +
Sbjct: 446 LDKP-TYGIHGTPEPSKIGKTE---SHGCVRLTNWDARELAKLV---SPGVTVEFV 494


>gi|163849861|ref|YP_001637904.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163661466|gb|ABY28833.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 369

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 67/264 (25%), Gaps = 40/264 (15%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
               +       +  A+K F    GL     +     + +        + Q  +    +K
Sbjct: 96  SPGAIDGRDGENLRGALKAFAAAQGLPEGDRLTREVFDRLQATGKEPVVTQYTITEEDVK 155

Query: 185 KLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +KM  +        P     A E           +         L      ++   
Sbjct: 156 GPFVEKMPAKMEEQAEVGPMRYTNAREMLAERFHMQRDLFSALNPNVPLDKAGGTLVVAA 215

Query: 243 YW----------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI-------------DEKGK 279
                        +   + + ++    ++   + +D  +                D   K
Sbjct: 216 VPPLGEGKVEGAPVAPKVTRIEVDKRTKRVRAFAEDGKLTADYPASIGSSEKPAPDGSAK 275

Query: 280 EVFVEEVDWNSPEPP--------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
              V    W +  P            F   PG  + +    I+     +  +H TPEP  
Sbjct: 276 VKAVAFDPWYTYNPKYQFKGVKATKKFSIHPGPNSPVGVVWIDLSIP-SYGIHGTPEPEK 334

Query: 332 FNNVVRFETSGCVRVRN--IIDLD 353
                   + GC+R+ N    DL 
Sbjct: 335 VGKTE---SHGCIRLTNWDARDLA 355


>gi|218458323|ref|ZP_03498414.1| hypothetical protein RetlK5_02246 [Rhizobium etli Kim 5]
          Length = 90

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/73 (60%), Positives = 56/73 (76%)

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
           GCVRV+N+ DL  WLL++TP WSR  +E+V+ +   TP+KLA EVPV+FVYISAW   D 
Sbjct: 1   GCVRVQNVRDLTNWLLRETPGWSRQQMEQVIASGVNTPIKLAAEVPVYFVYISAWGMPDG 60

Query: 402 IIQFRDDIYGLDN 414
           I+QFRDDIY +D 
Sbjct: 61  IVQFRDDIYQMDG 73


>gi|222086478|ref|YP_002545012.1| hypothetical protein Arad_3040 [Agrobacterium radiobacter K84]
 gi|221723926|gb|ACM27082.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 528

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 62/283 (21%), Gaps = 31/283 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P+  L  G S + +  +   L   G       +       V  A+  +Q   G    
Sbjct: 238 PAEPVITLK-GKSKMEITAIEVFLARQG--ISPGAIDGRMGGNVTKAIYAYQQMTGQTLD 294

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP--AASLEAVENGK 212
                S LE + +   + I    +            +   Y               E   
Sbjct: 295 PKDTDSILEQLRLSGGMPIINYTITPADAAGPYVASIPEDYAEKAQMPSLGYTSTTEMLA 354

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                     +            + I            + K +    R+       N   
Sbjct: 355 ERFHMDEGYLKELNPGVDFTVPGSTIKVVNTGPSKTGTVAKILADKGRKQVFAYDANGTL 414

Query: 273 MIDEKGK-------------EVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMAS 310
           +                    V     +      P   F+Q          PG    +  
Sbjct: 415 IAAYPASIGSTDTPSPSGTVTVERVAFNPGYTYNPKINFKQGANDKILDIPPGPNGPVGV 474

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +         +H TPEP          + GCVR+ N     
Sbjct: 475 VWMALSKP-TYGIHGTPEPSKIGKSQ---SHGCVRLTNWDATA 513


>gi|116253083|ref|YP_768921.1| ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257731|emb|CAK08829.1| putative ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 462

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 73/287 (25%), Gaps = 35/287 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  L+  L  +G       +     + V  A+  +    G         + LE + + 
Sbjct: 185 PEIVALQVFLDRAG--ASPGVIDGHMGSNVTKAILAYDQMTGSKLDPNNTDAILEELRMT 242

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDR 226
             L +    +           ++   Y    + P+ A     E             +   
Sbjct: 243 GGLPVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDEAFLKEMN 302

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMID--EKGKEVFV 283
                      I            + + +    R+    Y    N+        G     
Sbjct: 303 PGADFTVPGTVIKVVNPGEPKSGAVARIIADKGRKQVFAYDGAGNLLAAYPASIGSTDTP 362

Query: 284 EE----------VDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                       ++      P   F+Q          PG    + +  +         +H
Sbjct: 363 SPSGTVNVERVALNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSKP-TYGIH 421

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
            TPEP       R ++ GC+R+ N    +L   +    P  +   ++
Sbjct: 422 GTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFVD 462


>gi|222149174|ref|YP_002550131.1| hypothetical protein Avi_2943 [Agrobacterium vitis S4]
 gi|221736159|gb|ACM37122.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 423

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/301 (12%), Positives = 76/301 (25%), Gaps = 38/301 (12%)

Query: 98  PIRPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
              P  LG+S      +  L+  L   G       +       V+ A++ +Q + G   +
Sbjct: 132 TAAPSTLGSSGKAKPEITALQVFLAREGF--SPGAIDGHMGMNVQKALEAWQQKTGETLN 189

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP--AASLEAVENGK 212
                + +E + +   L      +           ++   Y               E   
Sbjct: 190 PNDTDAIMERLRMNGGLPFTSYTLTAADAAGPYVAEIPEDYSQKAAMPSLGYTSTTEMLA 249

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                     +            + +            + + +    R+      ++   
Sbjct: 250 EKFHMDEGYLKALNPGVDFTVPGSTVKVVSIGQPHSGRVARIVAEKGRKQVLAYGEDGQL 309

Query: 273 MIDEKGKE-------------VFVEEVDWNSPEPPNFIFRQ---------DPGKINAMAS 310
           +                    V     D      P   F+Q          PG    + +
Sbjct: 310 ITAYPASIGSNDTPSPSGTVQVQRVAFDPGYTYNPKVNFQQGANDKVLNIPPGPNGPVGT 369

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHI 368
             I         +H TPEP       R ++ GC+R+ N    +L   +    P  +   I
Sbjct: 370 VWIALSKP-TYGIHGTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---QPGVTVEFI 422

Query: 369 E 369
           +
Sbjct: 423 D 423


>gi|149186695|ref|ZP_01865006.1| ErfK/YbiS/YcfS/YnhG [Erythrobacter sp. SD-21]
 gi|148829603|gb|EDL48043.1| ErfK/YbiS/YcfS/YnhG [Erythrobacter sp. SD-21]
          Length = 281

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 70/270 (25%), Gaps = 49/270 (18%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +          A++ F+   GL   G +D   + ++         Q          
Sbjct: 14  SPGVIDGYMGGNTMRAIQHFRQARGLPAEGGLDPQLIRSLIKS------QRGEIFETYTI 67

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG--------KVGLRSTVIVGRVDRQTPILHSRINR 237
             +   G  + + +  +A       G                 + R        +    R
Sbjct: 68  TRDDVDGPFFRVPSAMSAMAALERVGWTSPQELIADRFHMDQDLLRALNPDADFNRVGTR 127

Query: 238 IMFNPYW--VIPRSIIQKDMMALLRQDPQYLKDNNIH----------------------- 272
           I    +    +P  + + ++         + +  N+                        
Sbjct: 128 ITIVAHGDETLPSQVARIEVRKSDNSVVAFDERGNVLASYPATVGSAQFPSPSGSMEVVA 187

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           +  +          +W     P+      PG  N +    ++        +H +P+P L 
Sbjct: 188 VAPDANYTFDPTGREW----GPDEKLIIPPGPNNPVGGIWVDLSKP-GYGIHGSPDPQLI 242

Query: 333 NNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                  + GCVR+ N    +L   + + T
Sbjct: 243 GKT---ASHGCVRLTNWDAKELADAVGQGT 269


>gi|13472965|ref|NP_104532.1| hypothetical protein mll3427 [Mesorhizobium loti MAFF303099]
 gi|14023713|dbj|BAB50318.1| mll3427 [Mesorhizobium loti MAFF303099]
          Length = 505

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 77/297 (25%), Gaps = 42/297 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG--LDPSGMVD 158
            L LG     V  L+  L   G       +   F + V+ A+  +    G  L  +  V 
Sbjct: 211 SLSLGVR-QDVAALQVLLDRGG--ASPGVIDGRFGSNVDKALAAYNQITGSNLKSTDTVG 267

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV---NIPAASLEAVENGKVGL 215
                A+            +            +   Y      N     +   E      
Sbjct: 268 IQ--AALAQSGGDAFASYTITAEDAAGPYVASIPEDYGQKAQLNCMCY-ISVTEALAERF 324

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
                  +   +    +     I    +  +  + + + +    +++      +   +  
Sbjct: 325 HMDENYLKSINKGLDFNRPGTIIKVANFGKLVSTPVARIVADKTKKEVYAYDASGKLVAA 384

Query: 276 EKGKE-------------VFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKI 313
                             V    +D N    PN  F+Q          PG    + S  I
Sbjct: 385 YPATIGSADTPSPTGIHAVSRIALDPNYTYNPNINFKQGQNDKILTIPPGPNGPVGSVWI 444

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHI 368
                    +H TPEP          + GCVR+ N    +L   +   +P  +   +
Sbjct: 445 ALDKP-TYGIHGTPEPSKIGKTE---SHGCVRLTNWDARELAKLV---SPGVTVEFV 494


>gi|240137087|ref|YP_002961556.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           AM1]
 gi|240007053|gb|ACS38279.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           AM1]
          Length = 369

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 66/264 (25%), Gaps = 40/264 (15%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
               +       +  A+K F    GL     +     + +        + Q  +    +K
Sbjct: 96  SPGAIDGRDGENLRGALKAFAAAQGLPEGDRLTREIFDRLQANGKEPVVTQYTITEEDVK 155

Query: 185 KLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +KM  +        P       E           +         L      ++   
Sbjct: 156 GPFVEKMPPKMEEQAEVGPMRYTNTREMLAERFHMQRDLFSALNPNVPLDKAGGTLVVAA 215

Query: 243 YW----------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI-------------DEKGK 279
                        +   + + ++    ++   + +D  +                D   K
Sbjct: 216 VPPLGEGKVEGAPVAPKVTRIEVDKRTKRVRAFAEDGKLTADYPASIGSSEKPAPDGSAK 275

Query: 280 EVFVEEVDWNSPEPP--------NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
              V    W +  P            F   PG  + +    I+     +  +H TPEP  
Sbjct: 276 VKAVAFDPWYTYNPKYQFKGVKATKKFSIHPGPNSPVGVVWIDLSIP-SYGIHGTPEPEK 334

Query: 332 FNNVVRFETSGCVRVRN--IIDLD 353
                   + GC+R+ N    DL 
Sbjct: 335 VGKTE---SHGCIRLTNWDARDLA 355


>gi|119486095|ref|ZP_01620157.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
 gi|119456870|gb|EAW37998.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
          Length = 225

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 4   YLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYH-----SIVNDRFDNFLAR 58
           Y KI K    FF+   + +G++     +        + E           + +   +   
Sbjct: 34  YRKIYKFFSMFFLITAILLGVN-AAFALQQGNRGIKVVELQKKLHKIGYFDGQITGYYGT 92

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP------LHLGNSSVSVQ 112
           +     S      + T   T   IA Y+ + + G    +  +       L LG+S   V 
Sbjct: 93  LTQNAVSQF----QATNGLTVDGIAGYKTLAALGLSEAITTQTSQHTSLLKLGSSGSLVI 148

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L + G  D    ++  +D   + AV LFQM  GL   G+V   T  A+ 
Sbjct: 149 ELQQHLQVLGYYD--GLMTGYYDLSTQQAVILFQMDVGLKSDGIVGPLTQAAIE 200



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GN  + V  L+++L   G  D    ++  +    ++AV  FQ  +GL   G+    
Sbjct: 59  ALQQGNRGIKVVELQKKLHKIGYFD--GQITGYYGTLTQNAVSQFQATNGLTVDGIAGYK 116

Query: 161 TLEAMNVPVD 170
           TL A+ +   
Sbjct: 117 TLAALGLSEA 126


>gi|167645239|ref|YP_001682902.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter sp. K31]
 gi|167347669|gb|ABZ70404.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter sp. K31]
          Length = 370

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 78/270 (28%), Gaps = 40/270 (14%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +     + +  A+  FQ  + L   G +  +  +A+       +    +    +  
Sbjct: 98  SPGVIDGQEGSNLTLALSAFQEANRLTVDGKLSPAVWDALAADSAPALTDYLITPEDVAG 157

Query: 186 L--LEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
               +        +  +PA      +E           + +              I+   
Sbjct: 158 PFTPDIPKDDYEAMAKLPALGYGTPLEALAEKFHMDEPLLQALNPGVDFSKAGTTIIVAA 217

Query: 243 YWVIPRSIIQKDMMALLRQD---------PQYLKDNNIHMIDEK--GKEVFVEEV-DW-- 288
               P  +  + +   + +            Y   + +  +     G       V +W  
Sbjct: 218 LG--PEGLSAEGLDGKVTRIEIDNARGVLKAYADGDKLLAVYPATVGSTERPAPVGEWAV 275

Query: 289 --------NSPEPPNFIFRQD-------PGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                    + +P    F +         G  N + ST I+   ++   +H TP+P L N
Sbjct: 276 NTVAPRPTYTYDPTRLTFGKPTGKLTLKAGPNNPVGSTWIDLT-KDTYGIHGTPDPRLVN 334

Query: 334 NVVRFETSGCVRVRNII--DLDVWLLKDTP 361
              R  + GCVR+ N    +L   ++K   
Sbjct: 335 K--RA-SHGCVRLTNWDAAELGKAVVKGAK 361


>gi|220920071|ref|YP_002495372.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944677|gb|ACL55069.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 339

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 74/296 (25%), Gaps = 44/296 (14%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                + +++  L  +        +       +E A+K F    G+  SG +D +  +A+
Sbjct: 47  QPDPLLVKVQVLLDRARF--SPGVIDGRSGDNLEGALKAFAEARGMKASGRLDGALWDAL 104

Query: 166 NVPVDLR-IRQLQVNLMRIKKLLEQKMGLRYVLVN--IPAASLEAVENGKVGLRSTVIVG 222
            V      +    +          +++  +          A     E        +  + 
Sbjct: 105 AVTSQDPVLGDYTITEKDTAGPFVKEIPAKMEEQADLKALAYTGPAEMLAERFHMSRALF 164

Query: 223 RVDRQTPILHSRINRIMFNPYWVI------------PRSIIQKDMMALLRQDPQYLKDNN 270
                          +       +               + +  +     Q   Y  D  
Sbjct: 165 EALNPGKAFDKPGTLVTVAAVAPLELERPAAKSLPEEPKVQRIVVDKEALQVRAYGGDGA 224

Query: 271 IHMID--EKGKEVFVEEVDWNSPEP-------------------PNFIFRQDPGKINAMA 309
           +  +     G E           +                        F   PG  N + 
Sbjct: 225 LLAVYPASIGSEEKPAPQGTFKVKGIVFDPDYTYDPKYGFAGVHAKHKFTIRPGPNNPVG 284

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
              I+  +  +  +H TP+P          + GC+R+ N    DL   ++K     
Sbjct: 285 LVWIDLSAE-SYGIHGTPDPEKIGKTE---SHGCIRLTNWDARDLARHVVKGATVE 336


>gi|295690611|ref|YP_003594304.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
 gi|295432514|gb|ADG11686.1| ErfK/YbiS/YcfS/YnhG family protein [Caulobacter segnis ATCC 21756]
          Length = 359

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 70/251 (27%), Gaps = 30/251 (11%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---VDLRIRQLQVNLMR 182
               +       +  A++ FQ  H +   G V  + L+A+        L    +  + + 
Sbjct: 89  SPGVIDGRDGGNLTLAIRAFQKAHDMTVDGEVSQALLDALLATDGGPVLVDYTISQSDVA 148

Query: 183 IKKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
              +          +   PA    + VE           + R        +     IM  
Sbjct: 149 GPFMPPIPKEDYEAMAREPAMNYHDVVEMLAERFHMGEDLLRDLNPGVNFNQVGATIMVT 208

Query: 242 PYWVIPRSIIQKDM-MALLRQDPQYLKDNNIHMI--------------DEKGKEVFVEEV 286
                        + +       +   ++   +                 +     +   
Sbjct: 209 AAGADRLDAKVDRIEIDKALGQVRAFDESGAQLAVYPATVGSTERPAPSGEWAVRTLAPR 268

Query: 287 DWNSPEPPNFIFRQD-------PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
              + +P    F +         G  N + ST I+   ++   +H TP+P L N   R  
Sbjct: 269 PTYTYDPSRLTFGEPKAKLTIQAGPNNPVGSTWIDLT-KDTYGIHGTPDPKLVNK--RA- 324

Query: 340 TSGCVRVRNII 350
           + GCVR+ N  
Sbjct: 325 SHGCVRLTNWD 335


>gi|319781350|ref|YP_004140826.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167238|gb|ADV10776.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 501

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 75/304 (24%), Gaps = 40/304 (13%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-- 150
           G        L LG     V  L+  L   G       +   F + V+ A+  +    G  
Sbjct: 199 GDKTTVAPALSLGAR-QDVAALQVLLDRGG--ASPGVIDGRFGSNVDKALAAYNQITGAN 255

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA--SLEAV 208
           L  +  V  +   A+            +            +   Y               
Sbjct: 256 LRSTDAV--AIQAALAQSGGDAFANYTITAEDAAGPYVASIPEDYSQKAQLDRMGYTSVT 313

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E             +        +     I    +  +  + + + +    +++      
Sbjct: 314 EALAERFHMDENYLKALNPEVDFNRPGTIIKVANFGRLVSTPVARIVADKDKKEVFAYDA 373

Query: 269 NNIHMIDEKG-------------KEVFVEEVDWNSPEPPNFIFRQ---------DPGKIN 306
               +                    V    +D N    P+  F+Q          PG   
Sbjct: 374 GGKLVAAYPATIGSSDTPSPSGIHTVSRVALDPNYTYNPSINFKQGQNDKVLTIPPGPNG 433

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWS 364
            + S  I         +H TP+P          + GCVR+ N    +L   +   +P  +
Sbjct: 434 PVGSVWIALDKP-TYGIHGTPDPSKIGKTE---SHGCVRLTNWDARELAKLV---SPGVT 486

Query: 365 RYHI 368
              +
Sbjct: 487 VEFV 490


>gi|329890128|ref|ZP_08268471.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845429|gb|EGF94993.1| putative peptidoglycan binding domain protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 346

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 79/311 (25%), Gaps = 48/311 (15%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +  +P     ++   Q L +R            +          A+  F+   GL   G
Sbjct: 59  PVEGQPARPDAATARAQILLDRANF-----SPGVIDGLGGDNTRQAIAAFEKAAGLPQDG 113

Query: 156 MVDSSTLEAMNVPVDLR-IRQLQVNLMRIKKLLEQKMGLRYVLVNI--PAASLEAVENGK 212
           ++D+     +    D R +    +    +      ++      +           +E   
Sbjct: 114 VLDAEVFRRLTAGDDGRVLTDYTIAAADLAGPFIGQVPADLTEMAKLQTVGYATPLEMLA 173

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM--ALLRQDPQYLKDNN 270
                T  + +              I+         +     ++     R    Y   + 
Sbjct: 174 EKFHMTEGLLQALNPGVDFGKAGQTIVVAAVAQTELTDDVAHIVVDKAERSVRVYDAADK 233

Query: 271 IHMI-------------DEKGKEVFVEEVDWNSPEP-------PNFIFRQDPGKINAMAS 310
           +                  +   V V      + +P        +      PG  N + S
Sbjct: 234 LLAFYPATIGSSARPAPSGELSVVGVAPEPNYTYDPDRVSYDRGDRKVIVPPGPNNPVGS 293

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             I+   R+   +H TP+P          +SGCVR+ N              W    +  
Sbjct: 294 VWIDLS-RDTYGIHGTPDPSKVGKT---FSSGCVRLTN--------------WDAEQLAS 335

Query: 371 VVKTRKTTPVK 381
            VK       +
Sbjct: 336 KVKPGVRVTFR 346


>gi|329118082|ref|ZP_08246794.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465742|gb|EGF12015.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 349

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 68/237 (28%), Gaps = 73/237 (30%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              +V++NIP   L    +GK+     V VG+   QT I   +I    FNP W IP+SI 
Sbjct: 55  EGTHVVINIPQQRLFLYSDGKLSKIYPVAVGKAMTQTNIGSHKIGAKAFNPTWHIPKSIQ 114

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           ++               N I                              PG  N +   
Sbjct: 115 KE-------------LKNGIT--------------------------SVPPGPKNPLGPV 135

Query: 312 KIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            +          +H T  P          + GCVR+++   L                 +
Sbjct: 136 FVRLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------QFAK 178

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSI-----IQFRDDIYGLDNVHVGIIPL 422
            V T            P   +Y  A   +D         FR D Y   N+    +  
Sbjct: 179 TVSTGS----------PADVIYQMAALNEDGAGNLWLAAFR-DPYNKKNLDTAALRK 224


>gi|241205592|ref|YP_002976688.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859482|gb|ACS57149.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 466

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 78/301 (25%), Gaps = 36/301 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+ P+  L    S   +  L+  L  +G       +     + V   +  +    G    
Sbjct: 176 PDEPVITLK-NKSKPEIVALQVFLDRAG--ISPGVIDGHMGSNVTKGIYAYDQMTGSKLD 232

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGK 212
                + LE + +   L +    +           ++   Y    + P+ A     E   
Sbjct: 233 PNDTDAILEELRMTGGLPVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLA 292

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNI 271
                     +              I            + + +    R+    Y    N+
Sbjct: 293 ERFHMDEAFLKEMNPGADFTVAGTVIKVVNPGEPKSGAVARIIADKGRKQVFAYDGAGNL 352

Query: 272 HMID------------EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMAS 310
                                V    ++      P   F+Q          PG    + +
Sbjct: 353 LAAYPASIGSTDTPSPSGTVTVERVALNPGYTYNPKINFQQGANDKILNIPPGPNGPVGT 412

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHI 368
             +         +H TPEP       R ++ GC+R+ N    +L   +    P  +   +
Sbjct: 413 VWMALSKP-TYGIHGTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFV 465

Query: 369 E 369
           +
Sbjct: 466 D 466


>gi|209550209|ref|YP_002282126.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535965|gb|ACI55900.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 463

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 70/287 (24%), Gaps = 35/287 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  L+  L  +G       +     + V  +V  +    G         + LE + + 
Sbjct: 186 PEIVALQVFLDRAG--ISPGVIDGHMGSNVTKSVYAYDQMTGSKLDPNDTDAILEELRMN 243

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDR 226
             L +    +           ++   Y    + P+ A     E             +   
Sbjct: 244 GGLPVVSYTITPADAAGPYVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDEAFLKEMN 303

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK------- 279
                      I            + + +    R+           +             
Sbjct: 304 PGADFSVAGTVIKVVNPGEPKSGEVARIIADKGRKQVFAYDSAGNPIAAYPASIGSTDTP 363

Query: 280 ------EVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                  V     +      P   F+Q          PG    + +  +         +H
Sbjct: 364 SPSGIVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSKP-TYGIH 422

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
            TPEP       R ++ GC+R+ N    +L   +    P  +   ++
Sbjct: 423 GTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFVD 463


>gi|312890411|ref|ZP_07749948.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311297181|gb|EFQ74313.1| ErfK/YbiS/YcfS/YnhG family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 91

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 40/87 (45%)

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
           +R  + GCVR+   +D    L  D+  +       V    + T + L  +VPV+  Y + 
Sbjct: 1   MRAVSHGCVRLEKPLDFAHALFGDSAKYKTIEKCIVEDNPEPTSLSLNNKVPVYITYFTC 60

Query: 396 WSPKDSIIQFRDDIYGLDNVHVGIIPL 422
           WS     +QFR DIYGLD V    +  
Sbjct: 61  WSDDSGTLQFRKDIYGLDIVLYAHLQK 87


>gi|325293497|ref|YP_004279361.1| hypothetical protein AGROH133_07496 [Agrobacterium sp. H13-3]
 gi|325061350|gb|ADY65041.1| hypothetical protein AGROH133_07496 [Agrobacterium sp. H13-3]
          Length = 463

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 64/273 (23%), Gaps = 32/273 (11%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +  L+  L   G       +       V  A+  +Q   G           LE +    
Sbjct: 187 EIVALQTFLDREG--ISPGVIDGKMGDNVNKAIAAWQDMTGEKLDPNNSEDILERLRASG 244

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQ 227
            + I    +            +   Y   +     +     E             +    
Sbjct: 245 GMPIVDYTITAADAAGPYVASIPDDYAEKSQLPALSFTSTSEALAERFHMDETYLKELNP 304

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMAL-LRQDPQYLKDNNIHMID----------- 275
                     I         +  + + +    ++Q   Y +D  +               
Sbjct: 305 GIDFSVPGTIIKVVNPGEPKKGQVARIVAHKGIKQVFAYGEDGALIAAYPATIGSTDTPS 364

Query: 276 -EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHD 325
                 V    ++      P   FRQ          PG    + +  I         +H 
Sbjct: 365 PSGTHTVERVALNPGYTYNPKINFRQGQNDKILQIPPGPNGPVGTVWIALSKP-TYGIHG 423

Query: 326 TPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
           TPEP          + GC+R+ N    +L   +
Sbjct: 424 TPEPSKIGKTN---SHGCIRLTNWDATELAKMV 453


>gi|190892619|ref|YP_001979161.1| hypothetical protein RHECIAT_CH0003034 [Rhizobium etli CIAT 652]
 gi|190697898|gb|ACE91983.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 466

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 70/287 (24%), Gaps = 35/287 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  L+  L  +G       +     + V   +  +    G         + LE + + 
Sbjct: 189 PEIVALQVFLDRAG--ISPGVIDGHMGSNVTKGIYAYDQMTGSKLDPNDTDAILEELRMN 246

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDR 226
             L +    +            +   Y    + P+ A     E             +   
Sbjct: 247 GGLPVVSYTITPADAAGPFVAAIPEDYSHKALLPSLAYTSITEMLAERFHMDEAFLKEMN 306

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMID---------- 275
                      I            + + +    R+    Y    N+              
Sbjct: 307 PGADFSVPGTVIKVVNPGETKSGEVARIIADKARKQVFAYDGAGNLLAAYPASIGSTDTP 366

Query: 276 --EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                  V     +      P   F+Q          PG    + +  +         +H
Sbjct: 367 SPSGTVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSKP-TYGIH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
            TPEP       R ++ GC+R+ N    +L   +    P  +   ++
Sbjct: 426 GTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFVD 466


>gi|86358485|ref|YP_470377.1| hypothetical protein RHE_CH02882 [Rhizobium etli CFN 42]
 gi|86282587|gb|ABC91650.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 466

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 71/287 (24%), Gaps = 35/287 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  L+  L  +G       +     + V   +  +    G         + LE + + 
Sbjct: 189 PEIVALQVFLDRAG--ISPGVIDGHMGSNVTKGIYAYDQMTGSKLDPNDTDAILEELRMN 246

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDR 226
             L +    +           ++   Y    + P+ A     E             +   
Sbjct: 247 GGLPVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDEAFLKEMN 306

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMID---------- 275
                      I            + + +    R+    Y    N+              
Sbjct: 307 PGADFSVPGTVIKVVNPGEAKTGEVARIIADKGRKQVFAYDGAGNLIAAYPASIGSTDTP 366

Query: 276 --EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                  V     +      P   F+Q          PG    + +  +         +H
Sbjct: 367 SPSGTVTVERVAFNPGYTYNPKINFQQGTNDKILNIPPGPNGPVGTVWMALSKP-TYGIH 425

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
            TPEP       R ++ GC+R+ N    +L   +    P  +   ++
Sbjct: 426 GTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFVD 466


>gi|304394124|ref|ZP_07376047.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
 gi|303293564|gb|EFL87941.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
          Length = 477

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPI--------ISKETIAQTEK-------AI 82
           + I        +D F             D P              +A+           +
Sbjct: 116 DTIRRPRRDN-DDGFYLDERDGSRDARRDAPPNDWRRDDGYPDSELARPTAPSPERDIEV 174

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A   ++  +     +          +  +  L+  L   G       +   + + V  A+
Sbjct: 175 ARLPEVEQQPVDRAISPTTSKPRFGAAQMAELQVVLDREGF--SPGVIDGQWGSNVAKAM 232

Query: 143 KLFQMRHG-LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             ++   G L  +  +   T  A+       +    +    +      ++ + Y      
Sbjct: 233 DAYREAKGSLPIAKTIGLQT--ALAQTGGDALTSYTITRKDVAGPFVSRIPIDYARKAEL 290

Query: 202 A--ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
              A  + +E        +    +              I         +  +   +    
Sbjct: 291 QSLAYTDVIEMLAERFHMSEGFLKRLNPGRDFRRPGTTITVVKPGAKKKRPVHYIVADKA 350

Query: 260 RQDPQYLKDNNIHMIDE-------------KGKEVFVEEVDWNSPEPPNFIFRQ------ 300
           R+  +    N   ++                   V    +D      P   F+Q      
Sbjct: 351 RKQVRGYDRNGKLIVAYPATIGSASTPSPTGKHSVARIALDPEYTYNPKKNFQQGTNDKI 410

Query: 301 ---DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
               PG    + S  I         +H TP+P          ++GC+R+ N    +L   
Sbjct: 411 LRIPPGPNGPVGSVWIALSKP-TYGIHGTPDPSKIGKTE---SNGCIRLTNWDARELAAN 466

Query: 356 LLKD 359
           + K 
Sbjct: 467 VRKG 470


>gi|307308272|ref|ZP_07587981.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307319739|ref|ZP_07599164.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306894670|gb|EFN25431.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306901270|gb|EFN31876.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 468

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 85/345 (24%), Gaps = 51/345 (14%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
              + + +P +S    A  +     Y D L++   P  P   +  G S   +  L+  L 
Sbjct: 149 REDLPNSLPSLSDREEAAYD---PQYDDPLAQ---PMPPAMTVT-GKSRAEIAALQVFLD 201

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
             G       +     + V  A++ +Q   G           LE +     L I    + 
Sbjct: 202 REGF--SPGVIDGKMGSNVTKAIEAWQQATGETLDPNNTEDILERLRFNGGLPITTYTIT 259

Query: 180 LMRIKKLLEQKMGLRYV-LVNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
                      +   Y     +P  +     E             R              
Sbjct: 260 AADAAGPFVASIPEDYAHKAQLPHLSFTSVTEMLGEKFHMDEAYLRELNPGVDFSIPGTT 319

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE-------------VFVE 284
           I         +  + + +    R+      +    +                    V   
Sbjct: 320 IKVVNPGPNKKGKVARIVADKARKQVLAYDEAGKLIAAYPSTIGSSDTPSPSGTVHVERI 379

Query: 285 EVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             D      P   F+Q          PG    + +  I         +H TPEP      
Sbjct: 380 AFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKP-TYGIHGTPEPSKIGKT 438

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
               + GCVR+ N              W    + ++V T  T   
Sbjct: 439 Q---SHGCVRLTN--------------WDATELGKMVSTGVTVEF 466


>gi|15965961|ref|NP_386314.1| hypothetical protein SMc01575 [Sinorhizobium meliloti 1021]
 gi|15075231|emb|CAC46787.1| Hypothetical protein SMc01575 [Sinorhizobium meliloti 1021]
          Length = 454

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 85/345 (24%), Gaps = 51/345 (14%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
              + + +P +S    A  +     Y D L++   P  P   +  G S   +  L+  L 
Sbjct: 135 REDLPNSLPSLSDREEAAYD---PQYDDPLAQ---PMPPAMTVT-GKSRAEIAALQVFLD 187

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
             G       +     + V  A++ +Q   G           LE +     L I    + 
Sbjct: 188 REGF--SPGVIDGKMGSNVTKAIEAWQQATGETLDPNNTEDILERLRFNGGLPITTYTIT 245

Query: 180 LMRIKKLLEQKMGLRYV-LVNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
                      +   Y     +P  +     E             R              
Sbjct: 246 AADAAGPFVASIPEDYAHKAQLPHLSFTSVTEMLGEKFHMDEAYLRELNPGVDFSIPGTT 305

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE-------------VFVE 284
           I         +  + + +    R+      +    +                    V   
Sbjct: 306 IKVVNPGPNKKGKVARIVADKARKQVLAYDEAGKLIAAYPSTIGSSDTPSPSGTVHVERI 365

Query: 285 EVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             D      P   F+Q          PG    + +  I         +H TPEP      
Sbjct: 366 AFDPGYTYNPKINFQQGANDRILQLQPGPNGPVGTVWIALSKP-TYGIHGTPEPSKIGKT 424

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
               + GCVR+ N              W    + ++V T  T   
Sbjct: 425 Q---SHGCVRLTN--------------WDATELGKMVSTGVTVEF 452


>gi|218661191|ref|ZP_03517121.1| hypothetical protein RetlI_17403 [Rhizobium etli IE4771]
          Length = 276

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 73/276 (26%), Gaps = 32/276 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                +       V+ AV  F+  + L   G  D   +  +       +    V+     
Sbjct: 9   SSPGVIDGLPGENVDKAVAGFEAMNKLPVDGRPDPDLVSRLEDN-APIVETYVVSPEDAA 67

Query: 185 KLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            L++           + +       E         + + +         +     + +P 
Sbjct: 68  DLVDSIPEDYGEKAKMQSLGYTSVAEKLSERFHMDLDLLKALNPGSQFAAGDTVWVVSPG 127

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEP-------- 293
                 + + +      Q   Y +D  +  +     G +        +  +         
Sbjct: 128 PPREGRVKRIEADKKTGQVVAYGEDGYLLAVYPATIGSKDNPSPSGKHKVKGVARMPVYR 187

Query: 294 --PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
             P   F+Q           G    + +  I+        +H TPEP L + V    + G
Sbjct: 188 YDPKRNFKQGNNNKVLTIPKGPNGPVGTVWIDLTEP-TYGIHGTPEPKLIDKVG---SHG 243

Query: 343 CVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           CVR+ N    +L   +    P      +       K
Sbjct: 244 CVRLTNWDAEELAGMV---KPGVLVDFVNRSPAAPK 276


>gi|157374221|ref|YP_001472821.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
 gi|157316595|gb|ABV35693.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sediminis HAW-EB3]
          Length = 333

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 42/187 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+P   L     NGK      V +GRV R+TP + ++I   + NP W  P 
Sbjct: 88  DVPRKGIVINLPELRLYYFPTNGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPA 147

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +  +                                  +            G  N +
Sbjct: 148 SIRRDHL----------------------------------AERGEVLPRVVPAGPDNPL 173

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               ++    + +Y +H T +   F   +R  +SGCVR+ N  D+  WL        S  
Sbjct: 174 GKYAMQLSHGDGSYLIHGTNKD--FGVGMR-VSSGCVRL-NPDDI-EWLFHQAKYGDSVR 228

Query: 367 HIEEVVK 373
            I E VK
Sbjct: 229 VINETVK 235


>gi|163751582|ref|ZP_02158804.1| hypothetical protein KT99_01257 [Shewanella benthica KT99]
 gi|161328590|gb|EDP99743.1| hypothetical protein KT99_01257 [Shewanella benthica KT99]
          Length = 320

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 93/266 (34%), Gaps = 66/266 (24%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +  L+E L+  GD                     FQ        G+++   L   N  VD
Sbjct: 52  IGELQEHLVQKGDY--------------------FQTISKQYNVGILE---LMESNPGVD 88

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP 229
             +      L+   ++L   +  + +++N+P   L    +NGK      V +GR+ R+TP
Sbjct: 89  PFLPTPGSTLIIPTQMLLPDVPRKGIVLNLPELRLYYFPKNGKQVHVFPVGIGRIGRETP 148

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
            + ++I   + NP W  P SI ++ +                                  
Sbjct: 149 EMVTKIKARIPNPSWTPPASIRKEHL---------------------------------- 174

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                        G  N + +  ++    + +Y +H T +   F   +R  +SGCVR+ N
Sbjct: 175 -ERGEVLPAIVPAGPDNPLGNYAMQLSYGDGSYLIHGTNKD--FGVGMR-VSSGCVRL-N 229

Query: 349 IIDLDVWLLKDTP-TWSRYHIEEVVK 373
             D+  WL   T        I + VK
Sbjct: 230 PDDI-EWLFNQTQYGDPVRVINQTVK 254


>gi|294668409|ref|ZP_06733512.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309727|gb|EFE50970.1| hypothetical protein NEIELOOT_00327 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 317

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 67/234 (28%), Gaps = 71/234 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            +V++NIP   L    +GK+     V VG+   QT +   +I    FNP W IP+SI ++
Sbjct: 32  HHVVINIPQQRLFLYTDGKLAKIYPVAVGKAMTQTNLGSHKIGAKAFNPIWHIPKSIQKE 91

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    N +    PG  N +    +
Sbjct: 92  ---------------------------------------LNNGVTSIPPGPKNPLGPVFV 112

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 113 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------QFAKTI 155

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGIIPL 422
            T            P   +Y  A    D      +    D Y   N++   +  
Sbjct: 156 TTGS----------PADVIYQMAALNVDGAGNLWLAAYRDPYNKKNLNTAALRK 199


>gi|167630552|ref|YP_001681051.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1]
 gi|167593292|gb|ABZ85040.1| erfk/ybis/ycfs/ynhg [Heliobacterium modesticaldum Ice1]
          Length = 307

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 77/267 (28%), Gaps = 80/267 (29%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              PL        V  L+ERL   G       L   +D     AV   Q + GL   G V
Sbjct: 31  AAPPLK----GSDVAELQERLKELGYYS--GPLDGLYDRKTVDAVTQMQRQKGLKADGCV 84

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
            SST  A++ PV      +       +K     +G+  ++V +   +L  + +G V    
Sbjct: 85  SSSTWLALSPPV------MTNQPAEPRKPPSAPVGVITLVVELDKNTLSVLIDGNVYKTY 138

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V  G+ D  +P+   RI       +W                              D  
Sbjct: 139 PVATGKRDTPSPVGEWRIVDK--QKHWG-----------------------------DGF 167

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
           G       V W                                 Y +H T +P       
Sbjct: 168 GSRWLGFNVPW-------------------------------GIYGIHGTNKPWSVGKS- 195

Query: 337 RFETSGCVRVRN--IIDLDVWLLKDTP 361
              + GC R+ N  + +L  W+   T 
Sbjct: 196 --VSGGCFRMHNRDVEELFEWIPLRTV 220



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +L      +G +   V R++ RL   G           F A +E AV+ FQ +  +  +G
Sbjct: 230 KLSKSAYKIGMTGQEVARIQFRLQEKGF--SPGLADGRFGAEMEKAVRNFQKQQQISETG 287

Query: 156 MVDSSTLEAMNVPVDLR 172
           ++D +TL  ++  V+ +
Sbjct: 288 VIDEATLRLLDFQVEKK 304


>gi|90420186|ref|ZP_01228094.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90335520|gb|EAS49270.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 447

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 80/299 (26%), Gaps = 38/299 (12%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + I      P +        N+   +  L+  L  +G       +     + V  AV  +
Sbjct: 149 RTITESDPAPPVEAPKGK--NAEAEIAALQILLDRAGM--SPGVIDGRMGSNVNKAVAAY 204

Query: 146 QMRHG--LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV-NIPA 202
           + + G  L        +  E ++      I   ++    +       +   Y     +P 
Sbjct: 205 EEKFGRSLPTGDA--KALAEELDATGGPAITTYEITAEDVAGPYVAAIPSDYGEKAQLPE 262

Query: 203 ASL-EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR- 260
            S     E             R        + +  RI         +  + K +    R 
Sbjct: 263 MSFERVSERLAERFHMDEEFLRKINPGADFNRQGTRIKVAATGENVKGEVAKIIADKGRE 322

Query: 261 QDPQYLKDNNIHMIDEKG------------KEVFVEEVDWNSPEPPNFIFRQ-------- 300
           Q   Y  D ++                    +V     D N    P   F+Q        
Sbjct: 323 QVRAYAADGSLIAAYPSTIGSSDTPSPSGVVQVNRIAFDPNYTYNPKVNFKQGSNDKVLT 382

Query: 301 -DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
             PG    + +  I         +H TPEP          + GCVR+ N    +L   +
Sbjct: 383 IPPGPNGPVGTIWIALSKP-TYGIHGTPEPSKIGKTN---SHGCVRLTNWDATELAKMV 437


>gi|332968887|gb|EGK07934.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella kingae ATCC 23330]
          Length = 305

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 71/240 (29%), Gaps = 71/240 (29%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                 +YV++N+P   L    NG++     V VG+   QT +   RI    FNP W IP
Sbjct: 30  APDAEGQYVVINVPQQRLFLYNNGRLQKVYPVAVGKAMTQTNLGEHRIGAKAFNPTWHIP 89

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                                         + +    PG  N 
Sbjct: 90  LSIQRER---------------------------------------GDGVKTVPPGPSNP 110

Query: 308 MASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +          +H T  P    +V    + GCVR+++   L              
Sbjct: 111 LGPVFVRMGDPKLGLGIHGTSNP---GSVPGVASHGCVRMKSPDAL-------------- 153

Query: 367 HIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGIIPL 422
                ++T  T  V           Y  A   +D      +    D Y  +N+ V  +  
Sbjct: 154 EFARTIRTGSTALVS----------YEMAALNQDGAGNLWLAAFKDPYRKNNLRVNALKQ 203


>gi|218673617|ref|ZP_03523286.1| hypothetical protein RetlG_19593 [Rhizobium etli GR56]
          Length = 466

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 77/301 (25%), Gaps = 36/301 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+ P+  L    S   +  L+  L  +G       +     + V  ++  +    G    
Sbjct: 176 PDEPVITLK-NKSKPEIVALQVFLDRAG--ISPGVIDGHMGSNVTKSIYAYDQMTGSKLD 232

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGK 212
                + LE + +   L +    +            +   Y    + P+ A     E   
Sbjct: 233 PNNTDAILEELRMNGGLPVVSYTITPADAAGPFVAAIPEDYSHKALLPSLAFTSTTEMLA 292

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNI 271
                     +              I            + + +    R+    Y    N+
Sbjct: 293 ERFHMDEAFLKEMNPGADFSVPGTVIKVVNPGEPKSGEVARIIADKGRKQVFAYDGAGNL 352

Query: 272 HMID------------EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMAS 310
                                V     +      P   F+Q          PG    + +
Sbjct: 353 IAAYPASIGSTDTPSPSGTVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPVGT 412

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHI 368
             +         +H TPEP       R ++ GC+R+ N    +L   +    P  +   +
Sbjct: 413 VWMALSKP-TYGIHGTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVEFV 465

Query: 369 E 369
           +
Sbjct: 466 D 466


>gi|146343733|ref|YP_001208781.1| hypothetical protein BRADO6980 [Bradyrhizobium sp. ORS278]
 gi|146196539|emb|CAL80566.1| conserved hypothetical protein; putative signal peptide; Putative
           peptidoglycan-binding domain-containing protein
           [Bradyrhizobium sp. ORS278]
          Length = 324

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 70/252 (27%), Gaps = 31/252 (12%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +   F      A+  F    GLD    +     +A+       I   ++    +K 
Sbjct: 60  SPGEIDGHFGDNARKALAAFASARGLDSGSKLTQQLWDALRQDQAPAIVTYKITRDDVKG 119

Query: 186 LLEQKMGLRYV-LVNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI----M 239
              + +      + ++P        E        +  +                I    +
Sbjct: 120 PFLKTLPRHMEDMKDLPRLGYTSPREALAEKFHMSESLLAALNPKSKFDRAGEEIAVANV 179

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM-----IDEKGK-------EVFVEEVD 287
             P   +P  I + D+         + KD N        +    K       +V   + +
Sbjct: 180 MKPNETVP-EITRLDIDKQAESVQAFDKDGNRVAMLPATVGSDDKPTPVGSFKVDSIDAN 238

Query: 288 WNSPEPPNFIFR---------QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
            N    P++ F+           PG  N + S  I     N   +H T EP         
Sbjct: 239 PNYRYNPDYKFKGVKARKPFDIKPGPNNPVGSYWIGLSIGNGYGIHGTAEPAKVGKTE-- 296

Query: 339 ETSGCVRVRNII 350
            + GCVR+ N  
Sbjct: 297 -SHGCVRLTNWD 307


>gi|296132569|ref|YP_003639816.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296031147|gb|ADG81915.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 279

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 66/257 (25%), Gaps = 83/257 (32%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V+ ++ERL+  G       +   FD    +AV  FQ   GL   G+V   T  A+ 
Sbjct: 16  SGPDVKAVQERLVDLGYYK--GRVDGVFDPATANAVVAFQKSRGLKADGVVGPDTWSALG 73

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
             + +                        + ++     L   ++G       V VG+   
Sbjct: 74  TDMAVSAA---------------PGQGYRIFIDTERFRLSLFKDGVHQAAWPVAVGKPST 118

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            TPI    I   + NP                                   G       V
Sbjct: 119 PTPIGDWVITEKIMNPGGP-------------------------------FGARWMRISV 147

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            W                                  +H T  P          + GC+R+
Sbjct: 148 PWG------------------------------GYGIHGTDNPASIGT---AASHGCIRM 174

Query: 347 --RNIIDLDVWLLKDTP 361
              ++I L   +   TP
Sbjct: 175 YNEDVIKLYDIVGIGTP 191



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 8/96 (8%)

Query: 84  FYQDILSRGGWPELPIRP-----LHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
              DI+  G   ++  R      L +G      + ++++RL   G       L   F   
Sbjct: 181 KLYDIVGIGTPVKITGRVFTGRLLQIGIPPGSDIVQVQQRLQTLGYYKEE--LDGQFGPT 238

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
             +AV  FQ   GL P G+V   T E +    D  +
Sbjct: 239 TRNAVIAFQRVRGLVPDGIVGPRTYEELEKAYDQAL 274


>gi|146282381|ref|YP_001172534.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri A1501]
 gi|145570586|gb|ABP79692.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri A1501]
          Length = 451

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 69/248 (27%)

Query: 173 IRQLQVNLMRIKKLLEQ-------------KMGLRYVLVNIPAASLEAVENGK-VGLRST 218
           +  +  N      L  +                   +++NI    +     GK V     
Sbjct: 194 LELVAANPGVDPWLPGEGTDIILPTRFILPPGPREGIVINIAEYRMYYYPEGKNVVHTFP 253

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + +GR    +P+  +RI  +  NP W  P+SI ++                         
Sbjct: 254 LGIGREGWGSPVGTARITAMTSNPAWYPPKSIREE------------------------- 288

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                     ++ +         PG  N +   K+         +H + +   F   +R 
Sbjct: 289 ----------HAADGDPLPTVVPPGPDNPLGPYKMSLSLP-GYLIHGSNKK--FGIGMR- 334

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTP----------TWSRYHI----EEVVKTRKTTPVKL 382
            + GC R+   N+++L   +   TP            S   +       ++      + L
Sbjct: 335 VSHGCFRMLNHNVLELAKMVKVGTPVRIVDEPYKFGVSEGKVYLEAHAPLEDGDQKTLTL 394

Query: 383 ATEVPVHF 390
             +  V  
Sbjct: 395 MDKHAVVI 402


>gi|294139659|ref|YP_003555637.1| LysM domain-containing protein [Shewanella violacea DSS12]
 gi|293326128|dbj|BAJ00859.1| LysM domain protein [Shewanella violacea DSS12]
          Length = 307

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/269 (20%), Positives = 95/269 (35%), Gaps = 66/269 (24%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  +  L+E L++ GD                     FQ        G+++   L   N 
Sbjct: 29  SSLIGELQEHLVLKGDY--------------------FQTISKQYNVGILE---LMESNP 65

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
            VD  +      L+   ++L   +  + +++N+P   L    +NGK      V +GRV R
Sbjct: 66  GVDPFLPTPGTKLIIPTQMLLPDVPRKGIVLNLPELRLYYFSKNGKQVHVFPVGIGRVGR 125

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP + ++I   + NP W  P SI ++ +                               
Sbjct: 126 ETPEMVTKIKARIPNPSWTPPASIRKEHL------------------------------- 154

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                           G  N + +  ++    + +Y +H T +   F   +R  +SGCVR
Sbjct: 155 ----ERGEILPPVVAAGPDNPLGNYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSSGCVR 207

Query: 346 VRNIIDLDVWLLKDTP-TWSRYHIEEVVK 373
           + N  D+  WL   T        I + VK
Sbjct: 208 L-NPDDI-EWLFNQTKYGDPVRVINQTVK 234


>gi|170725525|ref|YP_001759551.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
 gi|169810872|gb|ACA85456.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella woodyi ATCC 51908]
          Length = 301

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 67/191 (35%), Gaps = 42/191 (21%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    +++N+P   L    +NGK      V +GR+ R+TP + ++I   + NP W  P 
Sbjct: 88  DVPRTGIVINLPELRLYYFPKNGKEVHVFPVGIGRIGRETPEMVTKIKSRIPNPSWTPPA 147

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +  +                                               G  N +
Sbjct: 148 SIRKDHL----------------------------------EERGEVLPRIVPAGPDNPL 173

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               ++    + +Y +H T +   F   +R  +SGC+R+ N  D+  WL        S  
Sbjct: 174 GKYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSSGCIRL-NPDDI-EWLFHQAKYGDSVR 228

Query: 367 HIEEVVKTRKT 377
            I + VKT   
Sbjct: 229 IINQTVKTSSE 239


>gi|262361435|gb|ACY58156.1| hypothetical protein YPD4_1248 [Yersinia pestis D106004]
          Length = 412

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
               +   +  AVK FQ   GL   G++   T E +NV    R   L +N+ R++ L   
Sbjct: 315 TDNIYTPELVEAVKRFQQWQGLTDDGVIGPRTREWLNVSPQTRATLLALNIQRLRILPGH 374

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
                 ++VNIP  SL   ++G   L S VIVGR  R+TP
Sbjct: 375 V--DNGIMVNIPNYSLNYYKDGAEVLSSRVIVGRPSRKTP 412



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +++N  +           + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPAAVLNAWQKAVNEGSTASYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + ++A+     +  R  WP++P  P L  G  S  +  LRE L  +G L P+  +
Sbjct: 199 DKMQQALKLM--LADRRPWPQMPTGPSLRPGQLSDDIPALREILDRTGMLHPTTPV 252


>gi|159185065|ref|NP_355095.2| hypothetical protein Atu2133 [Agrobacterium tumefaciens str. C58]
 gi|159140339|gb|AAK87880.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 460

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 65/273 (23%), Gaps = 32/273 (11%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +  L+  L   G       +       V  A+  +Q   G           LE +    
Sbjct: 184 EIVALQTFLDREG--ISPGVIDGKMGDNVNKAIAAWQDMTGDKLDPNNSDDILERLRASG 241

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVIVGRVDRQ 227
            + I    +            +   Y   +     +     E             +    
Sbjct: 242 GMPIVDYTITAADAAGPYVASIPDDYAAKSQLPALSFTSTSEALAERFHMDENYLKELNP 301

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMAL-LRQDPQYLKDNNIHMID----------- 275
                     I         +  + + +    ++Q   Y +D N+               
Sbjct: 302 GIDFTVPGTIIKVVNPGEAKKGQVARIVAHKGIKQVFAYGQDGNLIAAYPATIGSTDTPS 361

Query: 276 -EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHD 325
                 V    ++      P   F+Q          PG    + +  I         +H 
Sbjct: 362 PSGTHTVERIALNPGYTYNPKINFKQGQNDKILQIPPGPNGPVGTVWIALSKP-TYGIHG 420

Query: 326 TPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
           TPEP          + GC+R+ N    +L   +
Sbjct: 421 TPEPSKIGKTN---SHGCIRLTNWDATELAKMV 450


>gi|121534863|ref|ZP_01666682.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121306462|gb|EAX47385.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 211

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 71/264 (26%), Gaps = 74/264 (28%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V  L+  L I G    +  +   FDA   +A+  FQ   GL  +G +   T   
Sbjct: 20  GASGPLVAELQHILAIRGHY--NGEIHGRFDAETRAALARFQEEQGLPVTGELTPLTFCR 77

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +     + +        R K      +   ++L+      L   E+              
Sbjct: 78  LQAAEKISVDPAPQPPARGKS----SLSRPHILITKAKRQLTLFESN------------- 120

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP              W +                               GK     
Sbjct: 121 ---TPF-----------RQWPV-----------------------------AIGKPHTPT 137

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
            V   +                 + +  +   + ++  +H T  P L        ++GC+
Sbjct: 138 PVGNFAIAAKIM------NPGGVLGTRWMGL-NHDSYGIHGTNAPWLIGQ---MVSNGCI 187

Query: 345 RVRNI--IDLDVWLLKDTPTWSRY 366
           R+ N    +L   +   TP + R 
Sbjct: 188 RMHNPHAEELFALIFVGTPVYIRD 211


>gi|327480636|gb|AEA83946.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas stutzeri DSM 4166]
          Length = 321

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 71/248 (28%), Gaps = 69/248 (27%)

Query: 173 IRQLQVNLMRIKKLLEQ-------------KMGLRYVLVNIPAASLEAVENGK-VGLRST 218
           +  +  N      L  +                   +++NI    +     GK V     
Sbjct: 64  LELVAANPGVDPWLPGEGTDIILPTRFILPPGPREGIVINIAEYRMYYYPEGKNVVHTFP 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + +GR    +P+  +RI  +  NP W  P+SI ++                         
Sbjct: 124 LGIGREGWGSPVGTARITAMTSNPAWYPPKSIREE------------------------- 158

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                     ++ +         PG  N +   K+         +H + +   F   +R 
Sbjct: 159 ----------HAADGDPLPTVVPPGPDNPLGPYKMSLSLP-GYLIHGSNKK--FGIGMR- 204

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTP----------TWSRYHI----EEVVKTRKTTPVKL 382
            + GC R+   N+++L   +   TP            S   +       ++      + L
Sbjct: 205 VSHGCFRMLNHNVLELAKMVKVGTPVRIVDEPYKFGVSEGKVYLEAHAPLEDGDQKTLTL 264

Query: 383 ATEVPVHF 390
             +  V  
Sbjct: 265 MDKHAVVI 272


>gi|227822683|ref|YP_002826655.1| putative ErfK/YbiS/YhnG family protein [Sinorhizobium fredii
           NGR234]
 gi|227341684|gb|ACP25902.1| putative ErfK/YbiS/YhnG family protein [Sinorhizobium fredii
           NGR234]
          Length = 479

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 70/319 (21%), Gaps = 47/319 (14%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P   +  G S   +  L+  L   G       +     + V  A++ +Q   G    
Sbjct: 174 PMPPAIEMK-GKSRAEITALQVFLDREGF--SPGVIDGKMGSNVTKALEAWQQATGEKLD 230

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV---ENG 211
                  LE +     L I    +            +   Y         L      E  
Sbjct: 231 PNNTEDILERLRFNGGLPITTYTITAADAAGPYVAAIPEDYAHKAQ-LPHLSFTSTTEML 289

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                      R              I            + + +    R+      D   
Sbjct: 290 GEKFHMDEGYLRELNPGVDFSIPGTTIKVINPGPNKSGKVARIIADKGRKQVLAYDDAGK 349

Query: 272 HMI-------------DEKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMA 309
            +                    V     D      P   F+Q          PG    + 
Sbjct: 350 LIAAYPATIGSADTPSPSGTVTVERIAFDPGYTYNPKINFQQGANDRILTLQPGPNGPVG 409

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           +  I         +H TP+P          + GCVR+ N              W    + 
Sbjct: 410 TVWIALSRP-TYGIHGTPDPSKIGKTQ---SHGCVRLTN--------------WDATELG 451

Query: 370 EVVKTRKTTPVKLATEVPV 388
           ++V    T         P+
Sbjct: 452 KMVSRGVTVEFVDEPGAPI 470


>gi|149186455|ref|ZP_01864768.1| hypothetical protein ED21_23238 [Erythrobacter sp. SD-21]
 gi|148830044|gb|EDL48482.1| hypothetical protein ED21_23238 [Erythrobacter sp. SD-21]
          Length = 373

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 81/304 (26%), Gaps = 51/304 (16%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+ S  +  ++  L  S        +        E A++ ++  +GL P   VDS  L 
Sbjct: 93  LGDRSKKLIAIQVMLDKS--RHSPGVIDGRMGGNTERAIEYYRKAYGLPPGTGVDSELLA 150

Query: 164 AMNVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIV 221
           ++         R   +    + +   +       +  +      +A E            
Sbjct: 151 SLMDNHGGDIFRTYTITEKDVSRQFYEIPEEFPEMAEMKKLGYRDAKEMLAERFHMDQDF 210

Query: 222 GRVDRQTPILHSRINRIMFNPYW-VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--- 277
                          +++   +      + I K  +         L +    ++      
Sbjct: 211 LSALNPGANFSEAGTQLVIVSHGDNALDADIAKIEVRKGENTVAGLDEAGNVVVSYPATI 270

Query: 278 ---------------------GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                      ++  W     P+  F   PG  N +  T I+  
Sbjct: 271 GSSDFPSPSGQMEVAAIAPAPNYTFDPDDQQW----GPDKTFIIPPGPNNPVGGTWIDLG 326

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
            +    +H +P+P +     R  + GCVR+ N              W      + V T  
Sbjct: 327 -KEGYGIHGSPDPQMVAK--RA-SHGCVRLTN--------------WDAAAFAKAVTTGT 368

Query: 377 TTPV 380
               
Sbjct: 369 PVEF 372


>gi|298370231|ref|ZP_06981547.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298281691|gb|EFI23180.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 350

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 69/236 (29%), Gaps = 71/236 (30%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             ++V +NIP   L    +G++     V VG+   QT +   +I    FNP W IP+SI 
Sbjct: 47  EGQHVFINIPQQRLFIYTDGQLTKAYPVAVGKSMTQTTLGEHKIGVKAFNPTWHIPQSIQ 106

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           ++                                         + +    PG  N +   
Sbjct: 107 KER---------------------------------------GDGVKSVPPGPKNPLGPV 127

Query: 312 KIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
            +          +H T  P          + GCVR+++   L                  
Sbjct: 128 FVRLGDPKLGLGIHGTNTPASV---PGIRSHGCVRMKSPDAL--------------EFAT 170

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGIIPL 422
            + T            P + +Y  A   +D+     +    D Y   N++   +  
Sbjct: 171 TITTGS----------PAYVIYQMASLNEDANKNLWLAAYRDPYNKKNLNTDALRK 216


>gi|302382909|ref|YP_003818732.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193537|gb|ADL01109.1| ErfK/YbiS/YcfS/YnhG family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 370

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 64/260 (24%), Gaps = 36/260 (13%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
               +        E AV  F+  + L   G +D      +            ++   +  
Sbjct: 109 SPGAIDGLGGQNTEQAVAAFEQANDLPVDGQLDEQVFARLTQNAGAVTTTYTISAADVAG 168

Query: 186 LLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
                +             +    +E        T  +                I+    
Sbjct: 169 PFVATIPTDLAAQGELTALSYRTPLEMLAERFHVTEGLLTALNPGVDFARAGQAILVPAV 228

Query: 244 WVIP-RSIIQKDMMALLRQDPQYLKDNN------------------------IHMIDEKG 278
              P  + + +  ++      +    +                         + + +E  
Sbjct: 229 ADQPLPAAVTRIEVSKGEGSLRAFGADGTLLAFYPATVGSSARPAPTGRLTVVGVANEPD 288

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                + V   S +  +       G  N + S  IE   R+   +H TPEP         
Sbjct: 289 YTYDPDRV---SYDRGDKKVVVPAGPNNPVGSVWIELS-RDTYGIHGTPEPSKIAKT--- 341

Query: 339 ETSGCVRVRN--IIDLDVWL 356
            +SGCVR+ N     L   +
Sbjct: 342 ASSGCVRLTNWSAEQLAKAV 361


>gi|325267376|ref|ZP_08134037.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
 gi|324981171|gb|EGC16822.1| ErfK/YbiS/YcfS/YnhG family protein [Kingella denitrificans ATCC
           33394]
          Length = 363

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +YV++NIP   L    NG++     V VG+   QT +   RI    FNP W IP SI ++
Sbjct: 78  QYVVINIPQQRLFLYNNGRLQKVYPVAVGKAMTQTTLGEHRIGAKAFNPTWHIPLSIQRE 137

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +    PG  N +    +
Sbjct: 138 R---------------------------------------GDGVKSVPPGPRNPLGPVFV 158

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P    +V    + GCVR+++   L                   +
Sbjct: 159 RLGEPRLGLGIHGTSNP---GSVPGVASHGCVRMKSPDAL--------------EFARTI 201

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            +  T          V   Y  A   +D      +    D Y   N+ V  +
Sbjct: 202 TSGTT----------VMVSYEMAALNQDGAGNLWLAVFRDPYNKRNLRVDAL 243


>gi|163761637|ref|ZP_02168707.1| hypothetical protein HPDFL43_12303 [Hoeflea phototrophica DFL-43]
 gi|162281131|gb|EDQ31432.1| hypothetical protein HPDFL43_12303 [Hoeflea phototrophica DFL-43]
          Length = 481

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 70/303 (23%), Gaps = 37/303 (12%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P  P     LG     V  L+  L  +G       +     + V+ A+  ++   G  
Sbjct: 190 GEPSKPFAAPRLGK--AEVAALQVYLDRNGF--SPGVIDGRMGSNVQKALAAWREATGER 245

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA--SLEAVEN 210
                    L  +     L      +            +   Y               E 
Sbjct: 246 IDPTDTDLILSRLAADGGLAFTTYTITAEDAAGPFIASVPADYAEKAKLERLAFTSTQEM 305

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
                       +             +I           I+ + +    R+  +      
Sbjct: 306 LAERFHMDERYLKELNPGVDFSRPGVQIKVVSTGEKKSGIVTRIIADKARKQLRAYDAAG 365

Query: 271 IHMIDEKGK-------------EVFVEEVDWNSPEPPNFIFRQ---------DPGKINAM 308
             +                    +     +      P   F+Q          PG    +
Sbjct: 366 QLVAAYPATIGSSSTPSPTGEVTIERIARNPGYTYNPKINFKQGDNDRILEVPPGPNGPV 425

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRY 366
            S  I         +H TPEP          ++GCVR+ N    +L   +    P  S  
Sbjct: 426 GSVWIALSKP-TYGIHGTPEPSKIGKTS---SNGCVRLTNWDAEELAGMVA---PGVSVS 478

Query: 367 HIE 369
            +E
Sbjct: 479 FVE 481


>gi|261213952|ref|ZP_05928233.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915559|gb|EEX82420.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 527

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           L     G RYV+VN PA      E+G+  L   V++G    + 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHRP 471


>gi|260754701|ref|ZP_05867049.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|260674809|gb|EEX61630.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
          Length = 527

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           L     G RYV+VN PA      E+G+  L   V++G    + 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHRP 471


>gi|260757925|ref|ZP_05870273.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761747|ref|ZP_05874090.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260668243|gb|EEX55183.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260672179|gb|EEX59000.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 527

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 254 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 311

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 312 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 369

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 370 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 429

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           L     G RYV+VN PA      E+G+  L   V++G    + 
Sbjct: 430 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHRP 471


>gi|260883727|ref|ZP_05895341.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260873255|gb|EEX80324.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
          Length = 517

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 244 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           L     G RYV+VN PA      E+G+  L   V++G    + 
Sbjct: 420 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHRP 461


>gi|260545357|ref|ZP_05821098.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260096764|gb|EEW80639.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
          Length = 517

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY-HSIVNDRFD--NFLARVDMGIDSDIPIISKETIA 76
           L   +   E  I A  L    +            +     +     +    P  ++   A
Sbjct: 244 LRYAIDAGEGRIIADRLSGFHDLPRTRVNPKAVLEQLARESDPSAYLHGFQPDNAQ--YA 301

Query: 77  QTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVS---VQRLRER------LIISGDLDP 126
             ++A+A       RG    +     +  G+ S     V  L  R      L    D+  
Sbjct: 302 ALKRALA--DTEPPRGKPIRISFDGVIKPGDKSEQLSKVVALISRHAPADYLAQHRDVLA 359

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKK 185
           +   +  +D  + SA+K +Q   G  P G++  +T+ A+      +R  ++  ++ R++ 
Sbjct: 360 AHADASVYDPELVSAIKDYQKLSGGTPDGLIGRATISALQGEQTSIRRDRILYSMERLRW 419

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           L     G RYV+VN PA      E+G+  L   V++G    + 
Sbjct: 420 LP-HDFGKRYVMVNQPAYHAGYYEDGQQKLGMNVVIGSPTHRP 461


>gi|330503579|ref|YP_004380448.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
 gi|328917865|gb|AEB58696.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
          Length = 318

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +P+   R+     NP W  P+SI
Sbjct: 96  PREGIVINLAEYRLYYFPKGQNVVHTFPLGIGREGWGSPLGVGRVTVKTPNPAWYPPKSI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +         PG  N +  
Sbjct: 156 REE-----------------------------------HAADGDILPTVVPPGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K+         +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 YKMTLSFP-GYLIHGSNKK--FGIGMR-VSHGCFRMLNHNVLELADMVPVGTP 229


>gi|218659271|ref|ZP_03515201.1| hypothetical protein RetlI_06191 [Rhizobium etli IE4771]
          Length = 211

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSS 108
                      I S  P   +      +  +A  +     G   ++       L  G+SS
Sbjct: 26  LARMSPDTGAYIASRSPDSPQ--FEALKAELAKLRA-ADGGNEEQIVVSLSGLLRPGDSS 82

Query: 109 VSVQRLRERLIISGDLDPSKGLSVA---------FDAYVESAVKLFQMRHGLDPSGMVDS 159
             +  + + +   G        +           +   + + V+ FQ   GL   G++  
Sbjct: 83  PEIANIVKAVQKHGSETLRTDHAATFAAYAGGSDYSPEIVALVEDFQKERGLKADGVIGQ 142

Query: 160 STLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +T+ AM        +I +L+V + + + L  + +G RYV++N PA       +GK  L  
Sbjct: 143 ATVRAMTGGDTNASKIDKLEVAMEQARWLP-EDLGSRYVMINQPAYMAYYHNDGKEQLSM 201

Query: 218 TVIVGRVDRQ 227
            V+VG  + Q
Sbjct: 202 RVVVGGKNNQ 211


>gi|146307579|ref|YP_001188044.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
 gi|145575780|gb|ABP85312.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
          Length = 318

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 56/173 (32%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + +GR    +P+   R+     NP W  P+SI
Sbjct: 96  PREGIVINLAEYRMYYFPKGQNVVHTYPLGIGREGWGSPLGTGRVTVKTPNPAWYPPKSI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ E         PG  N +  
Sbjct: 156 REE-----------------------------------HAAEGDILPTVVPPGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K+         +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 YKMTLSFP-GYLIHGSNKK--FGIGMR-VSHGCFRMLNHNVLELAAMVPVGTP 229


>gi|28210881|ref|NP_781825.1| tonB-dependent receptor protein [Clostridium tetani E88]
 gi|28203320|gb|AAO35762.1| tonB-dependent receptor protein [Clostridium tetani E88]
          Length = 312

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 64/235 (27%), Gaps = 65/235 (27%)

Query: 135 DAYVES--AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           D  ++   AV  FQ    L+  G+V   T + +          +  N      + E    
Sbjct: 122 DENLDFRYAVLQFQSSKNLNCDGIVGPETSKYL----------MNENNNPSDSVPETLKH 171

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +++N     L    +GKV  +  V  G     TP     I   + NP W        
Sbjct: 172 GYSMVINKDKRILTVYLDGKVYKKYPVAAGASPSYTPEGKFTIVSKLINPTW-------- 223

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                               +    G+ +                        N +    
Sbjct: 224 --------------------ISTRTGQVISGGT------------------PQNPLGKRW 245

Query: 313 IEFYSRNN--TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
           +           +H +  P          + GC+R+ N  + +L  ++  + P W
Sbjct: 246 LGLSIDGGSMYGIHGSNNPWSIGTN---VSLGCIRMFNNDVEELFDFIPMNCPIW 297


>gi|294851105|ref|ZP_06791778.1| hypothetical protein BAZG_00002 [Brucella sp. NVSL 07-0026]
 gi|294819694|gb|EFG36693.1| hypothetical protein BAZG_00002 [Brucella sp. NVSL 07-0026]
          Length = 334

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/340 (12%), Positives = 93/340 (27%), Gaps = 42/340 (12%)

Query: 64  DSDIPIISKETIAQTEKA--IAFYQDILSRG-GWP----ELPIRPLHLGNSSVS-VQRLR 115
            S++P    +    T  A     Y+   +R  G P     +P   +  G  + + +   +
Sbjct: 3   RSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPNDMVPAVEMPKGQGAKAKIAAYQ 62

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
             L  +G       +     + V+ A   ++   G   +   +++    +         +
Sbjct: 63  VLLDRAG-ASSPGVIDGRSGSNVDKAAAAYREMTGKIINPTDEAAVNAELEATGGPAFGE 121

Query: 176 LQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
             +    + ++ +            +PA       E             +        + 
Sbjct: 122 YMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAEMLGEKFHIDEAYLKEINPGVNFNQ 181

Query: 234 RINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEE----- 285
             +   + N    +   + +       +Q   Y ++  + +      G            
Sbjct: 182 PGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDENGKLVVAYPSTIGSSDNPSPSGIVQ 241

Query: 286 -----VDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                ++ N    P   F+Q          PG    + +  I         +H TP P  
Sbjct: 242 VERIAINPNYTYNPKINFKQGNNDKVLIIPPGPNGPVGTVWIALSKP-TYGIHGTPAPSR 300

Query: 332 FNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
                   + GCVR+ N    +L   +    P  +    E
Sbjct: 301 IGKTS---SHGCVRLTNWDAEELAKLV---KPGVTVEFTE 334


>gi|254490906|ref|ZP_05104088.1| ErfK/YbiS/YcfS/YnhG family [Methylophaga thiooxidans DMS010]
 gi|224463815|gb|EEF80082.1| ErfK/YbiS/YcfS/YnhG family [Methylophaga thiooxydans DMS010]
          Length = 394

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 58/184 (31%), Gaps = 46/184 (25%)

Query: 190 KMGLRYVLVNIPAASLEAV-----ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                 +++NI    L        ++ +  +   + +GR    TP+  +RI   + NP W
Sbjct: 96  DAPREGIVINIAEMRLYYYPKTAKDSLQQVVTHPIGIGREGWATPLGKTRITNKVKNPTW 155

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI ++ +                                               G 
Sbjct: 156 TPPESIRKEHL-----------------------------------ENGDPLPKVVPAGP 180

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
            N + + K+         +H T +P  F   +R  + GC+R+    D+   L   TP+ +
Sbjct: 181 DNPLGAYKMNLSMP-GYLLHGTNKP--FGVGLR-VSHGCIRLY-PEDI-EHLFHLTPSNT 234

Query: 365 RYHI 368
              I
Sbjct: 235 GVEI 238


>gi|304386762|ref|ZP_07369030.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
 gi|304339162|gb|EFM05248.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ATCC
           13091]
          Length = 365

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|325202722|gb|ADY98176.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240149]
 gi|325208718|gb|ADZ04170.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           NZ-05/33]
          Length = 358

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|325128783|gb|EGC51645.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis N1568]
          Length = 344

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 93  R---------------------------------------GDGVKTIAAGPDNPLGPVFV 113

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 198


>gi|15676382|ref|NP_273518.1| hypothetical protein NMB0471 [Neisseria meningitidis MC58]
 gi|7225699|gb|AAF40908.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|316984751|gb|EFV63710.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
 gi|325140891|gb|EGC63400.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis CU385]
 gi|325199656|gb|ADY95111.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis H44/76]
          Length = 358

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|121635388|ref|YP_975633.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|161870603|ref|YP_001599775.1| hypothetical protein NMCC_1671 [Neisseria meningitidis 053442]
 gi|218768765|ref|YP_002343277.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|254805501|ref|YP_003083722.1| hypothetical protein NMO_1571 [Neisseria meningitidis alpha14]
 gi|120867094|emb|CAM10860.1| hypothetical protein NMC1677 [Neisseria meningitidis FAM18]
 gi|121052773|emb|CAM09119.1| hypothetical protein NMA2014 [Neisseria meningitidis Z2491]
 gi|161596156|gb|ABX73816.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|254669043|emb|CBA07504.1| conserved hypothetical protein [Neisseria meningitidis alpha14]
 gi|254670599|emb|CBA06543.1| hypothetical protein NME_1166 [Neisseria meningitidis alpha153]
 gi|254672572|emb|CBA06223.1| hypothetical protein NMW_0790 [Neisseria meningitidis alpha275]
 gi|261391984|emb|CAX49448.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           8013]
 gi|308388672|gb|ADO30992.1| hypothetical protein NMBB_0524 [Neisseria meningitidis alpha710]
 gi|319411005|emb|CBY91403.1| conserved hypothetical periplasmic protein [Neisseria meningitidis
           WUE 2594]
 gi|325130769|gb|EGC53504.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           OX99.30304]
 gi|325134836|gb|EGC57472.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M13399]
 gi|325136857|gb|EGC59455.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis M0579]
 gi|325138839|gb|EGC61390.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis ES14902]
 gi|325142905|gb|EGC65267.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           961-5945]
 gi|325198847|gb|ADY94303.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis G2136]
 gi|325203575|gb|ADY99028.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240355]
 gi|325205535|gb|ADZ00988.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M04-240196]
          Length = 358

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 72/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+ +  +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDIASL 212


>gi|167622954|ref|YP_001673248.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167352976|gb|ABZ75589.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 299

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 42/191 (21%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+    L    + GK      V +GRV R+TP + ++I   + NP W  P 
Sbjct: 88  DVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPA 147

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +  +                                               G  N +
Sbjct: 148 SIRKDHL----------------------------------EERGEELPRVVPAGPDNPL 173

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               I+    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL           
Sbjct: 174 GKFAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWLFDKVKYGERVT 228

Query: 367 HIEEVVKTRKT 377
            I E VKT   
Sbjct: 229 IINETVKTSTE 239


>gi|17986480|ref|NP_539114.1| protein ERFK/SRFK [Brucella melitensis bv. 1 str. 16M]
 gi|17982080|gb|AAL51378.1| protein erfk/srfk [Brucella melitensis bv. 1 str. 16M]
          Length = 286

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/287 (10%), Positives = 75/287 (26%), Gaps = 35/287 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +   +  L  +G       +     + V+ A   ++   G   +   +++    +   
Sbjct: 9   AKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGKIINPTDEAAVNAELEAT 66

Query: 169 VDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDR 226
                 +  +    + ++ +            +PA       E             +   
Sbjct: 67  GGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAEMLGEKFHIDEAYLKEIN 126

Query: 227 QTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFV 283
                +   +   + N    +   + +       +Q   Y ++  + +      G     
Sbjct: 127 PDVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDENGKLVVAYPSTIGSSDNP 186

Query: 284 EE----------VDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                       ++ N    P   F+Q          PG    + +  I         +H
Sbjct: 187 SPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKP-TYGIH 245

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
            TP P     +    + GCVR+ N    +L   +    P  +    E
Sbjct: 246 GTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTVEFTE 286


>gi|170738380|ref|YP_001767035.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168192654|gb|ACA14601.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 337

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 69/275 (25%), Gaps = 41/275 (14%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNLMRIK 184
               +       +  A+K F    G+  SG +D    EA+        +    +     +
Sbjct: 64  SPGAIDGRDGDNLRGALKAFAEAKGMPASGHLDGRLWEALAGSSQDPVLTDYALTKADAE 123

Query: 185 KLLEQKMGLRYVLVN--IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF-- 240
               +++  +          +     E        +  +         L      +    
Sbjct: 124 GPYAEEIPAKMEDQAELKALSYTGPAEMLAERFHMSRALFDALNPDKDLGRAGTVVTVAA 183

Query: 241 -------NPYWVIP--RSIIQKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWN 289
                   P   +P    + +  +     Q   Y  D  +  +     G E         
Sbjct: 184 VPPLATDRPGKGLPEEPKVARIVVGKEALQVRAYGGDGALLAVYPASVGSEEKPAPEGRF 243

Query: 290 SPEPPNF-------------------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
             E                        F   PG  N +    IE  +  +  +H TPEP 
Sbjct: 244 KVEGVTLNPTYTYDPKYAFKGVEATRKFTIKPGPNNPVGLVWIELSAE-SYGIHGTPEPE 302

Query: 331 LFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                    + GC+R+ N    DL + + +     
Sbjct: 303 KIGKSE---SHGCIRLTNWDARDLALHVARGATVE 334


>gi|171915811|ref|ZP_02931281.1| ErfK/YbiS/YcfS/YnhG family protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 364

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/314 (12%), Positives = 83/314 (26%), Gaps = 60/314 (19%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             LR ++ +   L     +      +   A++ +Q  HGL  +  V++ TL+  +V    
Sbjct: 43  PILRLQIFLDTHLFGPGKVDGRPGEFTTKALRRYQQSHGLAET-EVENHTLDVSSVT--Q 99

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
                 +    ++ + +                   +E        +  +     Q   +
Sbjct: 100 LYTTYTIREEDLRFVGDLPSSPAAQSRKKYLPYDSLLEFLTERFHCSPDLLEFINQPLKM 159

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD--------------------NNI 271
                  +     V P  I Q + +  L + P++L                       ++
Sbjct: 160 SRLKPGDVVKVPNVEPFLIEQLEPIPSLPEVPEFLNRVIRIDTREKLLGVYEGDKLLASV 219

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFI------------------FRQDPGKINAMASTKI 313
            +    G         W                           +    G  N +    I
Sbjct: 220 PITTGSGYLATP-PGTWKIVGITQLPTFRWDKGVLEYGVRTSNYYELPIGPNNPVGVMWI 278

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
              +R    +H T +P       R  + GC+R  N              W    + +++ 
Sbjct: 279 GL-NRAGIGVHGTNQPQTIG---RSASHGCMRTAN--------------WDVVRLVKLIT 320

Query: 374 TRKTTPVKLATEVP 387
              T  ++    +P
Sbjct: 321 KGMTVIIEGPAPIP 334


>gi|225628068|ref|ZP_03786103.1| ErfK/YbiS/YcfS/YnhG domain protein [Brucella ceti str. Cudo]
 gi|225616893|gb|EEH13940.1| ErfK/YbiS/YcfS/YnhG domain protein [Brucella ceti str. Cudo]
          Length = 526

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 187 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 234

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 235 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 289

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 290 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 349

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 350 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 409

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 410 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 469

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 470 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 522

Query: 366 YHIE 369
              E
Sbjct: 523 EFTE 526


>gi|148560592|ref|YP_001259693.1| hypothetical protein BOV_1796 [Brucella ovis ATCC 25840]
 gi|148371849|gb|ABQ61828.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 526

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 187 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 234

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 235 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 289

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 290 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 349

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 350 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 409

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 410 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLIIPPGPNGP 469

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 470 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 522

Query: 366 YHIE 369
              E
Sbjct: 523 EFTE 526


>gi|325145008|gb|EGC67291.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria meningitidis
           M01-240013]
          Length = 358

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|313667851|ref|YP_004048135.1| hypothetical protein NLA_5060 [Neisseria lactamica ST-640]
 gi|313005313|emb|CBN86746.1| hypothetical protein NLA_5060 [Neisseria lactamica 020-06]
          Length = 340

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|157960797|ref|YP_001500831.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella pealeana ATCC
           700345]
 gi|157845797|gb|ABV86296.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella pealeana ATCC
           700345]
          Length = 303

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 66/191 (34%), Gaps = 42/191 (21%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L    + GK      V +GRV R+TP + +RI   + NP W  P 
Sbjct: 88  DVPHKGVVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTRIKSRIPNPSWTPPA 147

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI ++ +                                               G  N +
Sbjct: 148 SIRKEHL----------------------------------EERGEVLPRVVPAGPENPL 173

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               I+    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL           
Sbjct: 174 GKFAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWLFDQVKYGDQVT 228

Query: 367 HIEEVVKTRKT 377
            I E VKT   
Sbjct: 229 IINETVKTSTE 239


>gi|59801822|ref|YP_208534.1| hypothetical protein NGO1484 [Neisseria gonorrhoeae FA 1090]
 gi|194099286|ref|YP_002002380.1| hypothetical protein NGK_1755 [Neisseria gonorrhoeae NCCP11945]
 gi|239999553|ref|ZP_04719477.1| hypothetical protein Ngon3_08731 [Neisseria gonorrhoeae 35/02]
 gi|240014729|ref|ZP_04721642.1| hypothetical protein NgonD_08818 [Neisseria gonorrhoeae DGI18]
 gi|240017177|ref|ZP_04723717.1| hypothetical protein NgonFA_08426 [Neisseria gonorrhoeae FA6140]
 gi|240081184|ref|ZP_04725727.1| hypothetical protein NgonF_07718 [Neisseria gonorrhoeae FA19]
 gi|240113397|ref|ZP_04727887.1| hypothetical protein NgonM_07477 [Neisseria gonorrhoeae MS11]
 gi|240116255|ref|ZP_04730317.1| hypothetical protein NgonPID1_08470 [Neisseria gonorrhoeae PID18]
 gi|240121252|ref|ZP_04734214.1| hypothetical protein NgonPI_05693 [Neisseria gonorrhoeae PID24-1]
 gi|240124087|ref|ZP_04737043.1| hypothetical protein NgonP_09138 [Neisseria gonorrhoeae PID332]
 gi|240126296|ref|ZP_04739182.1| hypothetical protein NgonSK_08827 [Neisseria gonorrhoeae SK-92-679]
 gi|240128752|ref|ZP_04741413.1| hypothetical protein NgonS_09032 [Neisseria gonorrhoeae SK-93-1035]
 gi|254494270|ref|ZP_05107441.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|260439930|ref|ZP_05793746.1| hypothetical protein NgonDG_02373 [Neisseria gonorrhoeae DGI2]
 gi|268595365|ref|ZP_06129532.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268597296|ref|ZP_06131463.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268599470|ref|ZP_06133637.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268601920|ref|ZP_06136087.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268682710|ref|ZP_06149572.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268684880|ref|ZP_06151742.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268687137|ref|ZP_06153999.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291043209|ref|ZP_06568932.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|293398537|ref|ZP_06642715.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|59718717|gb|AAW90122.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
 gi|193934576|gb|ACF30400.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
 gi|226513310|gb|EEH62655.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|268548754|gb|EEZ44172.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268551084|gb|EEZ46103.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268583601|gb|EEZ48277.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268586051|gb|EEZ50727.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|268622994|gb|EEZ55394.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268625164|gb|EEZ57564.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268627421|gb|EEZ59821.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291012815|gb|EFE04798.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291611008|gb|EFF40105.1| hypothetical protein NGNG_01196 [Neisseria gonorrhoeae F62]
 gi|317164801|gb|ADV08342.1| hypothetical protein NGTW08_1380 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 358

 Score =  100 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGIRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|240118541|ref|ZP_04732603.1| hypothetical protein NgonPID_08787 [Neisseria gonorrhoeae PID1]
 gi|268604251|ref|ZP_06138418.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268588382|gb|EEZ53058.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGIRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 212


>gi|306842981|ref|ZP_07475614.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
 gi|306286852|gb|EFM58381.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
          Length = 477

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P +  + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSVRPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 VINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|256059844|ref|ZP_05450032.1| hypothetical protein Bneo5_05772 [Brucella neotomae 5K33]
          Length = 408

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPQPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|163843889|ref|YP_001628293.1| ATP synthase subunits region ORF 5 [Brucella suis ATCC 23445]
 gi|163674612|gb|ABY38723.1| ATP synthase subunits region ORF 5 [Brucella suis ATCC 23445]
          Length = 408

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 35/351 (9%), Positives = 87/351 (24%), Gaps = 48/351 (13%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKELNPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           + +  I         +H TP P          + GCVR+ N    +L   +
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV 398


>gi|254717934|ref|ZP_05179745.1| hypothetical protein Bru83_00010 [Brucella sp. 83/13]
          Length = 408

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKATAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                     +  +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEVYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|212633981|ref|YP_002310506.1| LysM domain-containing protein [Shewanella piezotolerans WP3]
 gi|212555465|gb|ACJ27919.1| LysM domain protein [Shewanella piezotolerans WP3]
          Length = 260

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 42/187 (22%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L    + G+      V +GR+ R+TP + +RI   + NP W  P 
Sbjct: 49  DVPHKGVVINLAELRLYYFPKGGQEVHVFPVGIGRIGRETPEMVTRIKSRIPNPSWTPPA 108

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI ++ +                                               G  N +
Sbjct: 109 SIRKEHL----------------------------------EERGEELPRVVLAGPDNPL 134

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               I+    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL  +     S  
Sbjct: 135 GKYAIQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWLFNEVKYGDSVT 189

Query: 367 HIEEVVK 373
            I + VK
Sbjct: 190 VINQTVK 196


>gi|265982876|ref|ZP_06095611.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306839069|ref|ZP_07471888.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|264661468|gb|EEZ31729.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306405847|gb|EFM62107.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
          Length = 477

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKATAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                     +  +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEVYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|261323814|ref|ZP_05963011.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261299794|gb|EEY03291.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
          Length = 477

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPQPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|254228730|ref|ZP_04922153.1| ErfK/YbiS/YcfS/YnhG family [Vibrio sp. Ex25]
 gi|262396548|ref|YP_003288401.1| hypothetical protein VEA_001253 [Vibrio sp. Ex25]
 gi|151938677|gb|EDN57512.1| ErfK/YbiS/YcfS/YnhG family [Vibrio sp. Ex25]
 gi|262340142|gb|ACY53936.1| hypothetical protein VEA_001253 [Vibrio sp. Ex25]
          Length = 308

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 42/175 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L     G+  +    V +GR+ R TP++ +RI++   NP W
Sbjct: 94  LILPDVPHKGIVINLAELRLYYFPKGEDIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPASIRAE-----------------------------------YKAKGIDLPTVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            N +    +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL +
Sbjct: 179 DNPLGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLFE 228


>gi|237816230|ref|ZP_04595223.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus str. 2308 A]
 gi|237788297|gb|EEP62512.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus str. 2308 A]
          Length = 526

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 187 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 234

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 235 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 289

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 290 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 349

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 350 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 409

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 410 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 469

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 470 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 522

Query: 366 YHIE 369
              E
Sbjct: 523 EFTE 526


>gi|269213836|ref|ZP_06158207.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
 gi|269145157|gb|EEZ71575.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria cinerea ATCC 14685]
          Length = 338

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 68/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +G +     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGNLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNTPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKD-SI---IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D      +    D YG +N+ +  +
Sbjct: 171 ATGSPASV----------IYQMAGLNEDAGNNLWLAAFHDPYGKNNLDIASL 212


>gi|127511939|ref|YP_001093136.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
 gi|126637234|gb|ABO22877.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella loihica PV-4]
          Length = 313

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 67/187 (35%), Gaps = 42/187 (22%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+P   L    +NG+      V +GR+ R+TP + ++I   + NP W  P 
Sbjct: 88  DVPRKGIVINLPELRLYYFPKNGREVHVFPVGIGRIGRETPEMTTKIKARIPNPSWTPPA 147

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           S+  + +                                               G  N +
Sbjct: 148 SLRAEHL----------------------------------RERGEVLPPVVPAGPDNPL 173

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-TWSRY 366
               ++    + +Y +H T +   F   +R  ++GC+R+ N  D+  WL        S  
Sbjct: 174 GKYAMQLSYGDGSYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-EWLFHQAKYGDSVR 228

Query: 367 HIEEVVK 373
            I + VK
Sbjct: 229 VINQTVK 235


>gi|261401380|ref|ZP_05987505.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
 gi|269208587|gb|EEZ75042.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria lactamica ATCC 23970]
          Length = 326

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 93  R---------------------------------------GDGVKTIAAGPDNPLGPVFV 113

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 198


>gi|296315100|ref|ZP_06865041.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
 gi|296838011|gb|EFH21949.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria polysaccharea ATCC
           43768]
          Length = 326

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 71/233 (30%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 93  R---------------------------------------GDGVKTIAAGPDNPLGPVFV 113

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLGLGIHGTNAPTSV---PGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNVHVGII 420
            +     V          +Y  A   +D+     +  FR D YG +N+    +
Sbjct: 157 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNLDTASL 198


>gi|23502715|ref|NP_698842.1| hypothetical protein BR1862 [Brucella suis 1330]
 gi|161619781|ref|YP_001593668.1| ATP synthase subunits region ORF 5 [Brucella canis ATCC 23365]
 gi|254704882|ref|ZP_05166710.1| hypothetical protein Bsuib36_13385 [Brucella suis bv. 3 str. 686]
 gi|254707602|ref|ZP_05169430.1| hypothetical protein BpinM_11681 [Brucella pinnipedialis
           M163/99/10]
 gi|254708860|ref|ZP_05170671.1| hypothetical protein BpinB_01088 [Brucella pinnipedialis B2/94]
 gi|254713717|ref|ZP_05175528.1| hypothetical protein BcetM6_10240 [Brucella ceti M644/93/1]
 gi|254715934|ref|ZP_05177745.1| hypothetical protein BcetM_05787 [Brucella ceti M13/05/1]
 gi|256030387|ref|ZP_05444001.1| hypothetical protein BpinM2_07025 [Brucella pinnipedialis
           M292/94/1]
 gi|256158370|ref|ZP_05456268.1| hypothetical protein BcetM4_05915 [Brucella ceti M490/95/1]
 gi|256253788|ref|ZP_05459324.1| hypothetical protein BcetB_05752 [Brucella ceti B1/94]
 gi|23348729|gb|AAN30757.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161336592|gb|ABX62897.1| ATP synthase subunits region ORF 5 [Brucella canis ATCC 23365]
          Length = 408

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|121534304|ref|ZP_01666128.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121307074|gb|EAX47992.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 408

 Score = 99.3 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 69/263 (26%), Gaps = 80/263 (30%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A+     + +  L + ++     ++  +    +++N+P+ +LE      +     V +G+
Sbjct: 2   AVGRGAAIAVLLLFLAILPAYAQIDPDIASPNIVINLPSRTLEFYSGSTLVKVYPVAIGK 61

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               TP  +  I     NP+W  PR                                   
Sbjct: 62  PSTPTPTGNFSIISKEVNPWWFPPRGGAA------------------------------- 90

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                             PG  N +    + F        H T  P          ++GC
Sbjct: 91  ----------------VPPGPDNPLGYRWMGFLPMYGI--HGTNTPWAIGT---AVSNGC 129

Query: 344 VRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY--ISAWSPKDS 401
           VR+                     + EVV              PV   Y  +        
Sbjct: 130 VRMHEA--------------DVEELYEVVPYGT----------PVKVTYDRVKVRVDAHG 165

Query: 402 I--IQFRDDIYGLDNVHVGIIPL 422
              +    DIYG  +V +  I  
Sbjct: 166 NASVGIYPDIYGYSDVTLSEIKR 188


>gi|256370263|ref|YP_003107774.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260169296|ref|ZP_05756107.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. F5/99]
 gi|260567644|ref|ZP_05838114.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|261217696|ref|ZP_05931977.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261315090|ref|ZP_05954287.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316353|ref|ZP_05955550.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261321457|ref|ZP_05960654.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261755576|ref|ZP_05999285.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261758808|ref|ZP_06002517.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|265996881|ref|ZP_06109438.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|256000426|gb|ACU48825.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260157162|gb|EEW92242.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260922785|gb|EEX89353.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261294147|gb|EEX97643.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261295576|gb|EEX99072.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261304116|gb|EEY07613.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738792|gb|EEY26788.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|261745329|gb|EEY33255.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|262551349|gb|EEZ07339.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
          Length = 477

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|27379486|ref|NP_771015.1| hypothetical protein blr4375 [Bradyrhizobium japonicum USDA 110]
 gi|27352638|dbj|BAC49640.1| blr4375 [Bradyrhizobium japonicum USDA 110]
          Length = 353

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 71/294 (24%), Gaps = 49/294 (16%)

Query: 117 RLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           RL +  D        +   F    + A++ +     L  S        +A+         
Sbjct: 74  RLQVLLDRAHFSPGEIDGRFGENAKKALRAYAEARQLPGSEAPMEEVWKALRADERPVTL 133

Query: 175 QLQVNLMRIKKLLEQKMGLRYV-LVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              +           K+  +   + +IP        E        +  +           
Sbjct: 134 TYTITERDAAGPFLNKLPSKMEDMKDIPKLGFTSPREALAEKFHMSEQLLAALNPGRRFD 193

Query: 233 SRINRIMF----NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM--------------I 274
              + I+     +     P    + + +  +RQ  +    +N  +               
Sbjct: 194 RAGDTIVVVDTASAGEGAPAKADRVE-VDKVRQTVKLFDKSNALIGFYPATVGSEDKPSP 252

Query: 275 DEKGKEVFVEEVDWNSPEP--------PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
               K   V +       P            F   PG  N + +  I   +     +H T
Sbjct: 253 SGTLKVTEVSKNPLYRYNPAYHFKGVRSRKPFTIKPGPNNPVGTVWINLSAE-GYGIHGT 311

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
           P P   +     E+ GCVR+ N              W    +   V        
Sbjct: 312 PSPDKISK---AESHGCVRLTN--------------WDAERVAGSVAKGTPVAF 348


>gi|332799591|ref|YP_004461090.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
 gi|332697326|gb|AEE91783.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
          Length = 307

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 84/267 (31%), Gaps = 80/267 (29%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+ ++ +L   G    +  +S  +D     AVK FQ   GL+  G++ S TL+ +
Sbjct: 41  MYGHDVREIQTQLKNMGYY--NDPISGVYDNITSKAVKAFQQDMGLEVDGILGSRTLDKI 98

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
               +  +  L+          E+  G   +++      L  +++GK   +  V VG+ +
Sbjct: 99  AELFEQPVAHLE---------PEKPKGEVSLVIFTLERQLIVLDDGKPFKQFPVAVGKFN 149

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             TPI    I +            I   +                       G       
Sbjct: 150 TPTPIGIFTITQKD----------IWSGEF----------------------GSRWMRLS 177

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
           V W                                 Y +H T +P        FE+SGC+
Sbjct: 178 VPW-------------------------------GIYGIHGTNKPWSIGT---FESSGCI 203

Query: 345 RVRN--IIDLDVWLLKDTPTWSRYHIE 369
           R+ N  +  +  W+   T  +    ++
Sbjct: 204 RMYNTHVEQVYEWVKIGTKVFMVGGVD 230



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  +++RL   G    +      ++   + AV  FQ   GL PSG VD++
Sbjct: 239 TLSQGSRGSDVLEVQKRLAGYGFY--NGDYDGIYEHETQKAVLAFQKAKGLYPSGKVDAA 296

Query: 161 TLEAMNV 167
           T + + +
Sbjct: 297 TYKELGI 303


>gi|306844837|ref|ZP_07477420.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
 gi|306274769|gb|EFM56550.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
          Length = 477

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|261220921|ref|ZP_05935202.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|265987425|ref|ZP_06099982.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|260919505|gb|EEX86158.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|264659622|gb|EEZ29883.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
          Length = 471

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 90/364 (24%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 132 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 179

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 180 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 234

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 235 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 294

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 295 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 354

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 355 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 414

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 415 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 467

Query: 366 YHIE 369
              E
Sbjct: 468 EFTE 471


>gi|330860173|emb|CBX70494.1| hypothetical protein YEW_AT04130 [Yersinia enterocolitica W22703]
          Length = 132

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           +IVGR  R+TP++ S +N ++ NP W +P S++++D++   R D  Y + +   ++    
Sbjct: 1   MIVGRPSRKTPLMSSALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWS 60

Query: 279 K---EVFVEEVDWNSP--EPPNFIFRQDPGKINAMA 309
                V    +DW+        +  RQ PG  N++ 
Sbjct: 61  NDAEVVDPSMIDWSMISPNNFPYRLRQAPGASNSLG 96


>gi|150389053|ref|YP_001319102.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948915|gb|ABR47443.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 280

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 77/285 (27%), Gaps = 86/285 (30%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V  ++ERL+  G  D    +   +D  +  AV+ +Q  +G+ P G+V   T 
Sbjct: 12  EPYMEGPDVMHIQERLVEIGFYDGE--IDGIYDEGLFEAVRTYQTEYGITPDGIVGPDTW 69

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            ++ +  D+ +                      + +++    L   +  ++     V VG
Sbjct: 70  NSIGLSPDVMVDL--------------PTEGYAIDIDLEQRILTLKQYTEILQSYPVAVG 115

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +    TP    RI +   NP                                   G    
Sbjct: 116 KPQTPTPPGDWRIIQKTLNPGGP-------------------------------FGTRWM 144

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              + W                                  +H T  P          ++G
Sbjct: 145 RINIPWGGY------------------------------GIHGTDAPESIGT---AASNG 171

Query: 343 CVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATE 385
           C+R+   ++  L   +   TP      I   + + +   + +   
Sbjct: 172 CIRMFNEDVEVLYDIVPLGTPV----RITGEIFSGRILTIGVEPR 212



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  ++  L   G       + + +D     AV+ FQ    +   G+V   T   + + 
Sbjct: 213 ADILDVKNILATLGYY--EGEIDMIYDEETMEAVRNFQRDFNIIADGVVGVDTYNKLQLA 270

Query: 169 VDL 171
           ++ 
Sbjct: 271 IEQ 273


>gi|260755548|ref|ZP_05867896.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260760495|ref|ZP_05872838.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260670927|gb|EEX57748.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675656|gb|EEX62477.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
          Length = 487

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 148 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 195

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 196 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 250

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 251 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 310

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 311 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 370

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 371 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 430

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 431 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 483

Query: 366 YHIE 369
              E
Sbjct: 484 EFTE 487


>gi|265993629|ref|ZP_06106186.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764610|gb|EEZ10531.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|326539581|gb|ADZ87796.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 487

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 148 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 195

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 196 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 250

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 251 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 310

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 311 MLGEKFHIDEAYLKEINPDVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 370

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 371 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 430

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 431 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 483

Query: 366 YHIE 369
              E
Sbjct: 484 EFTE 487


>gi|62290723|ref|YP_222516.1| hypothetical protein BruAb1_1841 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700637|ref|YP_415211.1| hypothetical protein BAB1_1867 [Brucella melitensis biovar Abortus
           2308]
 gi|254690012|ref|ZP_05153266.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 6 str. 870]
 gi|254694503|ref|ZP_05156331.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 3 str. Tulya]
 gi|254696128|ref|ZP_05157956.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731046|ref|ZP_05189624.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 4 str. 292]
 gi|256258268|ref|ZP_05463804.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 9 str. C68]
 gi|62196855|gb|AAX75155.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616738|emb|CAJ11823.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis biovar Abortus 2308]
          Length = 408

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|189024936|ref|YP_001935704.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|260545987|ref|ZP_05821727.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260758771|ref|ZP_05871119.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260884572|ref|ZP_05896186.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261214819|ref|ZP_05929100.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|189020508|gb|ACD73230.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|260096094|gb|EEW79970.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260669089|gb|EEX56029.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260874100|gb|EEX81169.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260916426|gb|EEX83287.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 477

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|297247110|ref|ZP_06930828.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 5 str. B3196]
 gi|297174279|gb|EFH33626.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 5 str. B3196]
          Length = 471

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 132 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 179

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 180 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 234

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 235 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 294

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 295 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 354

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 355 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 414

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 415 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 467

Query: 366 YHIE 369
              E
Sbjct: 468 EFTE 471


>gi|260562785|ref|ZP_05833271.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265999304|ref|ZP_05465741.2| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|260152801|gb|EEW87893.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|263093153|gb|EEZ17267.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|326409867|gb|ADZ66932.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis M28]
          Length = 477

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 185

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 186 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPDVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|225853302|ref|YP_002733535.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|256045477|ref|ZP_05448362.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256112202|ref|ZP_05453123.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225641667|gb|ACO01581.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
          Length = 408

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 116

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 117 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKEINPDVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|330448220|ref|ZP_08311868.1| lysM domain protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492411|dbj|GAA06365.1| lysM domain protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 300

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 43/182 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  + ++VN+    L               + +GRV R+TP + + IN  + NP W  P
Sbjct: 88  DVSHKGIVVNLAELRLYYFPKDDASKVYIFPIGIGRVGRETPSMTTTINEKVKNPTWTPP 147

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                                   ++            G  N 
Sbjct: 148 ASIRKE-----------------------------------HAARGDILPAVVPAGPDNP 172

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +   K+     +  Y +H T +   F   +R  + GC+R+ N  D   WL       ++ 
Sbjct: 173 LGDYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWD-VEWLFPHVALGTQV 227

Query: 367 HI 368
            I
Sbjct: 228 RI 229


>gi|269965347|ref|ZP_06179467.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829993|gb|EEZ84222.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 308

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 42/174 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L     G+  +    V +GR+ R TP++ +RI++   NP W
Sbjct: 94  LILPDVPYKGIVINLAELRLYYFPKGEDIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPASIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            N +    +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL 
Sbjct: 179 DNPLGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLF 227


>gi|227873353|ref|ZP_03991613.1| peptidoglycan-binding domain 1 [Oribacterium sinus F0268]
 gi|227840789|gb|EEJ51159.1| peptidoglycan-binding domain 1 [Oribacterium sinus F0268]
          Length = 455

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 9/151 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            I      L    +   V++ ++ +    ++    +      D          SK     
Sbjct: 76  TIDGQAEDLAPVNLTVGVINSVVKDLQQRLM----NLGYMEEDEPTTYYGDATSKAVQYF 131

Query: 78  TEKAIAFYQDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             +       I     W  L     P     LG     + +++ RL   G L  S  ++ 
Sbjct: 132 QRQTGRKMDGITGVDTWDALMSESAPHYAAKLGFQGDDITKIQYRLYNLGYLTESGQING 191

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            FD   E+AVK  Q  + L   G V  +T  
Sbjct: 192 TFDQDTETAVKKLQEVNKLTIDGTVGQTTYN 222



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 35/80 (43%), Gaps = 1/80 (1%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   G   +L    L +G  +  V+ L++RL+  G ++  +     +      AV+ F
Sbjct: 73  EGVTIDGQAEDLAPVNLTVGVINSVVKDLQQRLMNLGYMEEDEPT-TYYGDATSKAVQYF 131

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q + G    G+    T +A+
Sbjct: 132 QRQTGRKMDGITGVDTWDAL 151



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 57/149 (38%), Gaps = 5/149 (3%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L     +    I      EI+ +  + ++   + +  A  + G+ +   I + ++  + +
Sbjct: 223 LLYSDEVKANIIALGEQSEIVKKYQNRLIALGYLSGEADGNFGLSTQNAIRAFQS--RND 280

Query: 80  KAIAFYQDILSRGGWPELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           + +  Y    +R        +P    LG  S  V+ ++  L+  G L      S  F   
Sbjct: 281 QVVDGYLGPDTRSLMDSENAKPFGMRLGEQSDDVKNMQNLLVKYGYLSQD-KASGYFGEL 339

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + AV  FQ  +GL   G   + TL+ + 
Sbjct: 340 TKDAVIAFQSVNGLGTDGTAGAKTLQLLQ 368



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 61/188 (32%), Gaps = 13/188 (6%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
              +N  FD         +     +    T+ QT   +  Y D        E+    + L
Sbjct: 186 SGQINGTFDQDTETAVKKLQEVNKLTIDGTVGQTTYNLL-YSD--------EVKANIIAL 236

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V++ + RLI  G L         F    ++A++ FQ R+     G +   T   
Sbjct: 237 GEQSEIVKKYQNRLIALGYLSGEA--DGNFGLSTQNAIRAFQSRNDQVVDGYLGPDTRSL 294

Query: 165 MN-VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL-EAVENGKVGLRSTVIVG 222
           M+         +L      +K +    +   Y+  +  +    E  ++  +  +S   +G
Sbjct: 295 MDSENAKPFGMRLGEQSDDVKNMQNLLVKYGYLSQDKASGYFGELTKDAVIAFQSVNGLG 354

Query: 223 RVDRQTPI 230
                   
Sbjct: 355 TDGTAGAK 362


>gi|254506022|ref|ZP_05118167.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
 gi|219551245|gb|EED28225.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus 16]
          Length = 301

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 65/197 (32%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L   E +  +     V +GRV R TP + + I++   NP W  P SI +K+
Sbjct: 93  VVINLAELRLYYFEPDSGLVHIFPVGIGRVGRDTPEMSTTISQKRPNPTWTPPASI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A                                             G  N +    + 
Sbjct: 152 YLAK----------------------------------GIELPAVVPAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+    D+  WL    P  S      V+ 
Sbjct: 178 LAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-DWLF---PKVSLGEKVRVIN 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 --EPIKVSLEPDRSVFI 244


>gi|265991901|ref|ZP_06104458.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263002967|gb|EEZ15260.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 462

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/364 (10%), Positives = 91/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P    + +                 
Sbjct: 123 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPSARPQGVPNPND------------ 170

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 171 ---MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 225

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 226 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 285

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 286 MLGEKFHIDEAYLKEINPDVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 345

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 346 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 405

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P     +    + GCVR+ N    +L   +    P  + 
Sbjct: 406 VGTVWIALSKP-TYGIHGTPAPSRIGKIS---SHGCVRLTNWDAEELAKLV---KPGVTV 458

Query: 366 YHIE 369
              E
Sbjct: 459 EFTE 462


>gi|261380022|ref|ZP_05984595.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
 gi|284797229|gb|EFC52576.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria subflava NJ9703]
          Length = 368

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 107

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 108 R---------------------------------------NDGVKSVPAGPNNPLGPVFV 128

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P          + GCVR+++   L                 + +
Sbjct: 129 RLGDPKLSLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 171

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +    D Y   N+    +
Sbjct: 172 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 213


>gi|254700512|ref|ZP_05162340.1| hypothetical protein Bsuib55_06621 [Brucella suis bv. 5 str. 513]
          Length = 408

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/364 (10%), Positives = 92/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P              A  Q + +  
Sbjct: 69  QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPS-------------ARLQGVPNPN 115

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 116 D--MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 171

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 172 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 231

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 232 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 291

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 292 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 351

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 352 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 404

Query: 366 YHIE 369
              E
Sbjct: 405 EFTE 408


>gi|261213072|ref|ZP_05927356.1| hypothetical protein VCJ_003350 [Vibrio sp. RC341]
 gi|260838137|gb|EEX64814.1| hypothetical protein VCJ_003350 [Vibrio sp. RC341]
          Length = 306

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 64/202 (31%), Gaps = 47/202 (23%)

Query: 191 MGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           +    +++N+    L      +       V +GR+ R TP++ + I+    NP W  P S
Sbjct: 90  IPYEGIVINLAELRLYYFRPDEGKVYIFPVGIGRIGRDTPVMQTSISSKRKNPTWTPPES 149

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                   +  +          G  N + 
Sbjct: 150 IRRE-----------------------------------HKAKGDILPAVVPAGPDNPLG 174

Query: 310 STKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +     +  Y +H T +   F   +R  +SGC+R+ +  D+  WL +      +  I
Sbjct: 175 DYAMRLAYGSGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPKDI-EWLFQQVERGEKVRI 229

Query: 369 EEVVKTRKTTPVKLATEVPVHF 390
                  +   V L  +  V  
Sbjct: 230 IN-----EPIKVALEPDRSVFI 246


>gi|218677376|ref|ZP_03525273.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli CIAT 894]
          Length = 220

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 53/224 (23%), Gaps = 33/224 (14%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +    +           ++   Y    + P+ A     E             +      
Sbjct: 4   PVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDEAFLKEMNPGA 63

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMID------------E 276
                   I            + + +    R+    Y    N+                 
Sbjct: 64  DFSVAGTVIKVVNPGEPKSGEVARIIADKGRKQVFAYDSAGNLLAAYPASIGSTDTPSPS 123

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTP 327
               V     +      P   F+Q          PG    + +  +         +H TP
Sbjct: 124 GTVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSKP-TYGIHGTP 182

Query: 328 EPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
           EP       R ++ GC+R+ N    +L   +    P  +   ++
Sbjct: 183 EPSKIG---RTQSHGCIRLTNWDATELAQMV---KPGVTVEFVD 220


>gi|91223276|ref|ZP_01258542.1| hypothetical protein V12G01_05516 [Vibrio alginolyticus 12G01]
 gi|91192089|gb|EAS78352.1| hypothetical protein V12G01_05516 [Vibrio alginolyticus 12G01]
          Length = 308

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 42/174 (24%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L     G+ +     V +GR+ R TP++ +RI++   NP W
Sbjct: 94  LILPDVPYKGIVINLAELRLYYFPKGENIVHVFPVGIGRIGRDTPVMTTRISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPASIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
            N +    +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL 
Sbjct: 179 DNPLGMFALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLF 227


>gi|294011303|ref|YP_003544763.1| hypothetical protein SJA_C1-13170 [Sphingobium japonicum UT26S]
 gi|292674633|dbj|BAI96151.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 362

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 76/305 (24%), Gaps = 73/305 (23%)

Query: 124 LDPSKGLSVAFDAY----VESAVKLFQMRHGLDPSGMVDSSTLEAM---NVPVDLRIRQL 176
           LD +       D        +A+K FQ   GL  +G  D +T  A+          + ++
Sbjct: 71  LDRAGFSPGVLDGKEGMSFTTALKGFQEAKGLPTTGRYDEATARALLGDRPQPATWLVKI 130

Query: 177 QVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
                +     + + +  +  L          +E       +   V              
Sbjct: 131 PAGFAKGPFFAVPKDLNDQAKLP--ALGYRNLLEKLAERFHTRPEVLLALNPPNTKVGAG 188

Query: 236 NRIMFNPYWVIPRSIIQKD-----------------------MMALLRQDPQYLKDNNIH 272
             I        P + I+ D                       ++       +     N  
Sbjct: 189 ATIRVPAIANQPVARIEGDERGWGETLASLGVAKDQPQADHIVVDKSDGVLRAYDAQNRL 248

Query: 273 MI---DEKGKEVFVEEVD-------------------WNSPEPPNFIFRQDPGKINAMAS 310
           +       G +     +                    +      +      PG    +  
Sbjct: 249 IAQFPATMGSQHDPLPIGTWEIKGLSRNPDFHYNPDLFWDASSTDEKAVLKPGPNGPVGV 308

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             I+    +   +H TPEP       R E+ GC+R+ N              W    + +
Sbjct: 309 VWIDLSKPH-YGIHGTPEPQTIG---RTESHGCIRLTN--------------WDAARLAQ 350

Query: 371 VVKTR 375
           +V++ 
Sbjct: 351 MVQSG 355


>gi|289646814|ref|ZP_06478157.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. 2250]
          Length = 321

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRA-SHGCFRMYNNNVLELADM 223


>gi|261751015|ref|ZP_05994724.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261740768|gb|EEY28694.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
          Length = 477

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/364 (10%), Positives = 92/364 (25%), Gaps = 51/364 (14%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
               D  +  S        + +      +  D   P              A  Q + +  
Sbjct: 138 QGNRDGQVQRSELPPPGADYPDNTGTASIAPDYRQPS-------------ARLQGVPNPN 184

Query: 93  GWPELPIRPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
               +P   +  G  + + +   +  L  +G       +     + V+ A   ++   G 
Sbjct: 185 D--MVPAVEMPKGQGAKAKIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYREMTGK 240

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVE 209
             +   +++    +         +  +    + ++ +            +PA       E
Sbjct: 241 IINPTDEAAVNAELEATGGPAFGEYMITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVAE 300

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
                        +        +   +   + N    +   + +       +Q   Y ++
Sbjct: 301 MLGEKFHIDEAYLKEINPGVNFNQPGSVVKVPNLGKPVRAKVARIIADKGRKQVRGYDEN 360

Query: 269 NNIHMIDEK--GKEVFVEE----------VDWNSPEPPNFIFRQ---------DPGKINA 307
             + +      G                 ++ N    P   F+Q          PG    
Sbjct: 361 GKLVVAYPSTIGSSDNPSPSGIVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGP 420

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  I         +H TP P          + GCVR+ N    +L   +    P  + 
Sbjct: 421 VGTVWIALSKP-TYGIHGTPAPSRIGKTS---SHGCVRLTNWDAEELAKLV---KPGVTV 473

Query: 366 YHIE 369
              E
Sbjct: 474 EFTE 477


>gi|241759332|ref|ZP_04757438.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
 gi|241320468|gb|EER56765.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria flavescens SK114]
          Length = 353

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 93  R---------------------------------------NDGVKSVPAGPNNPLGPVFV 113

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P          + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLSLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +    D Y   N+    +
Sbjct: 157 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 198


>gi|331016238|gb|EGH96294.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 333

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|292490724|ref|YP_003526163.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
 gi|291579319|gb|ADE13776.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
          Length = 322

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 57/202 (28%), Gaps = 46/202 (22%)

Query: 192 GLRYVLVNIPAASLEAVENGK-----VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             R +++N+    L      +     V +   + +GR    TP+  + +     NP W+ 
Sbjct: 103 PRRGIVINLAEMRLYYFPESQPGQPGVVVTHPIGIGREGWSTPLGKTSVISKKKNPTWIP 162

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   +            PG  N
Sbjct: 163 PESIRAE-----------------------------------HEANGDPLPKVVPPGSDN 187

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +    +         +H T  P      +R  + GC+R+    D+     +     S  
Sbjct: 188 PLGKFALRLGMP-GYLIHGTNRPW--GVGMR-VSHGCIRLY-PEDIASLFAQVKVGASVN 242

Query: 367 HIEEVVKTR-KTTPVKLATEVP 387
            + +  K   K   + L   VP
Sbjct: 243 IVYQPFKAGIKDAVLYLEAHVP 264


>gi|323496502|ref|ZP_08101560.1| hypothetical protein VISI1226_13136 [Vibrio sinaloensis DSM 21326]
 gi|323318779|gb|EGA71732.1| hypothetical protein VISI1226_13136 [Vibrio sinaloensis DSM 21326]
          Length = 301

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           V++N+    L   E     +    V +GRV R TP + + I++   NP W  P SI +K+
Sbjct: 93  VVINLAELRLYYFEPNTDLVHIFPVGIGRVGRDTPEMTTTISQKRPNPTWTPPASI-RKE 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A                                             G  N +    + 
Sbjct: 152 YLAK----------------------------------GIELPAVVPAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  +     
Sbjct: 178 LAHGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-DWLFPRVNLGDKVRVIN--- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 --EPIKVSLEPDRSVFI 244


>gi|90577710|ref|ZP_01233521.1| hypothetical protein VAS14_11704 [Vibrio angustum S14]
 gi|90440796|gb|EAS65976.1| hypothetical protein VAS14_11704 [Vibrio angustum S14]
          Length = 300

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 43/182 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  + ++VN+    L               + +GRV R+TP + + IN  + NP W  P
Sbjct: 88  DVAHKGIVVNLAELRLYYFPKDDASKVYIFPIGIGRVGRETPSMTTSINEKVKNPTWTPP 147

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                                   ++            G  N 
Sbjct: 148 ASIRKE-----------------------------------HAARGDILPAVVPAGPDNP 172

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           + + K+     +  Y +H T +   F   +R  + GC+R+ N  D   WL       ++ 
Sbjct: 173 LGNYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWD-VEWLFPHVALGTQV 227

Query: 367 HI 368
            I
Sbjct: 228 RI 229


>gi|330958991|gb|EGH59251.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 321

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGMS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNDNVLELADM 223


>gi|319639270|ref|ZP_07994021.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
 gi|317399454|gb|EFV80124.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa C102]
          Length = 368

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 48  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTTLGEHKIGAKAYNPVWHIPKSIQKE 107

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 108 R---------------------------------------NDGVKSVPAGPNNPLGPVFV 128

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P          + GCVR+++   L                 + +
Sbjct: 129 RLGDPKLSLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 171

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +    D Y   N+    +
Sbjct: 172 ATGAPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 213


>gi|239832941|ref|ZP_04681270.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239825208|gb|EEQ96776.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 496

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 70/274 (25%), Gaps = 32/274 (11%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +   +  L  +G       +     + V+ A   +    G   +   +++    +   
Sbjct: 219 ARIAAYQVLLDRAG--ASPGVIDGRSGSNVDKAAAAYGELTGKSVNPTDEAAVNAELEAT 276

Query: 169 VDLRIRQLQVNLMRI-KKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDR 226
                 +  +    + ++ +            +PA       E             +   
Sbjct: 277 GGPAFTEYTITNEDVGRQYVASIPEDYAHKAQLPAMAYTSVTEMLGEKFHIDEAYLKEIN 336

Query: 227 QTPILHSRINR-IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFV 283
                +   +   + N    +   + +       +Q   Y +   + +      G     
Sbjct: 337 PGVNFNQPGSIVKVPNLGKPVRTKVARIIADKGRKQVRGYDETGKLVVAYPSTIGSSDNP 396

Query: 284 EE----------VDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                       ++ N    P   F+Q          PG    + +  I         +H
Sbjct: 397 SPSGTVQVERIAINPNYTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKP-TYGIH 455

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            TPEP          + GCVR+ N    +L   +
Sbjct: 456 GTPEPSRIGKTS---SHGCVRLTNWDAEELAKLV 486


>gi|312883050|ref|ZP_07742781.1| hypothetical protein VIBC2010_07174 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369210|gb|EFP96731.1| hypothetical protein VIBC2010_07174 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 300

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 83/241 (34%), Gaps = 47/241 (19%)

Query: 135 DAYVESAVKLFQMRHGLDPSGM-----VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           D+ +   V+  Q+  G   +G+     +   TL A N  VD  +      L    +++  
Sbjct: 26  DSRLVGRVQYHQVEKGETLAGIAKHYHIGFLTLMAANKGVDPFLPAEGHALTIPTQIILP 85

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    V++N+    L   + +G+      V +GR+ R TP++ + I++    P W  P 
Sbjct: 86  DVKRVGVVINLAELRLYYFDPDGQTVHIFPVGIGRIGRDTPVMQTSISQKRIKPTWTPPD 145

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +            YL +                                  G  N +
Sbjct: 146 SIRK-----------SYLAE------------------------GIKLPPVVPAGPDNPL 170

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
            +  +        Y +H T +   F   +R  +SGC+R+    D+  WL        R  
Sbjct: 171 GNHALRLAYGAGDYLIHGTNKD--FGVGLR-VSSGCIRME-PNDI-EWLFSQVQIGERVK 225

Query: 368 I 368
           I
Sbjct: 226 I 226


>gi|225076549|ref|ZP_03719748.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
 gi|224952120|gb|EEG33329.1| hypothetical protein NEIFLAOT_01597 [Neisseria flavescens
           NRL30031/H210]
          Length = 353

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 71/232 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NI    L   +NGK+     V VG+   QT +   +I    +NP W IP+SI ++
Sbjct: 33  QHVVINITQQRLFLYDNGKLSKIYPVAVGKAMTQTNLGEHKIGAKAYNPVWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 93  R---------------------------------------NDGVKSVPAGPNNPLGPVFV 113

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                  +  +H T  P          + GCVR+++   L                 + +
Sbjct: 114 RLGDPKLSLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 156

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
            T     V          +Y  A   +D+     +    D Y   N+    +
Sbjct: 157 ATGSPASV----------IYQMASLNEDANQNLWLAAYRDPYDKKNLDTAAL 198


>gi|298292778|ref|YP_003694717.1| Lysozyme [Starkeya novella DSM 506]
 gi|296929289|gb|ADH90098.1| Lysozyme [Starkeya novella DSM 506]
          Length = 508

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 82/296 (27%), Gaps = 64/296 (21%)

Query: 88  ILSRGGWPELPIRPLHLGNSSV------SVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +    G P+L    L +G           +  ++ RL+  G       +   F+   ++A
Sbjct: 244 LPRTKGAPKLDRPLLLVGMEDDEENPGKDIAEMQARLVELGYY--RGPVDGIFNPATDAA 301

Query: 142 VKLFQMRHGLDP--SGMVDSSTLE--AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           V+ FQ          G V   T +    + P         +     K  L      R   
Sbjct: 302 VREFQTEFFGWSEADGRVGPKTWKKLWGDAPPKPEEAIPPLQGSAGKTYLLLTRTDRRDR 361

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
                 +L  V +G       V  G+  +Q           +F P    P   +  + + 
Sbjct: 362 YGCMVMNLTYVRHGTAVGVLEVCSGQSRKQ-----------IFRPGPHSPAGSM--EPLP 408

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             +         NI   + K                  +         N +   KI    
Sbjct: 409 EGKWSIG-----NIEWAEGKDN-----------YSGRIY--------NNGLGPAKIRM-- 442

Query: 318 RNNTYMHDTPEPIL-------FNNVVRFETSGCVRVRNIID---LDVWLLKDTPTW 363
               Y+     P         +N      T+GC+ ++NI D   L  WL +  P  
Sbjct: 443 ---EYLDPGQTPRSAIEIHIDWNRPTAPGTAGCIGIQNISDFRTLVTWLRETDPKE 495


>gi|153836106|ref|ZP_01988773.1| ErfK/YbiS/YcfS/YnhG [Vibrio parahaemolyticus AQ3810]
 gi|260901112|ref|ZP_05909507.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
 gi|149750860|gb|EDM61605.1| ErfK/YbiS/YcfS/YnhG [Vibrio parahaemolyticus AQ3810]
 gi|308109403|gb|EFO46943.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus AQ4037]
          Length = 308

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 42/168 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
             + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P SI
Sbjct: 100 PHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASI 159

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                      +  +       G  N +  
Sbjct: 160 RAE-----------------------------------YRAKGVDLPAVVPAGPDNPLGL 184

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL 
Sbjct: 185 FALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLF 227


>gi|84385389|ref|ZP_00988421.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
 gi|84379986|gb|EAP96837.1| uncharacterized protein conserved in bacteria [Vibrio splendidus
           12B01]
          Length = 353

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+      + +++N+    L   E  K  +    V +GRV R TP + ++I++   NP W
Sbjct: 135 LILPDTPRKGIVINLAELRLYYFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTW 194

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI ++           YL+                                   G 
Sbjct: 195 TPPNSIRKE-----------YLEK------------------------GIELPRVVPAGP 219

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +     
Sbjct: 220 ENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQ---V 271

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
           SR     ++   +   V L  +  V  
Sbjct: 272 SRGEQVTIID--EPIKVSLEPDRSVFV 296


>gi|328469263|gb|EGF40209.1| hypothetical protein VP10329_10281 [Vibrio parahaemolyticus 10329]
          Length = 308

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 42/168 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
             + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P SI
Sbjct: 100 PHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASI 159

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                      +  +       G  N +  
Sbjct: 160 RAE-----------------------------------YRAKGVDLPAVVPAGPDNPLGL 184

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL 
Sbjct: 185 FALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLF 227


>gi|28901325|ref|NP_800980.1| hypothetical protein VPA1470 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362882|ref|ZP_05775751.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
 gi|260880170|ref|ZP_05892525.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           AN-5034]
 gi|260895287|ref|ZP_05903783.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28809872|dbj|BAC62813.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085792|gb|EFO35487.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308092500|gb|EFO42195.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus
           AN-5034]
 gi|308111963|gb|EFO49503.1| ErfK/YbiS/YcfS/YnhG family protein [Vibrio parahaemolyticus K5030]
          Length = 308

 Score = 96.3 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 42/168 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
             + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P SI
Sbjct: 100 PHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPASI 159

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                      +  +       G  N +  
Sbjct: 160 RAE-----------------------------------YRAKGVDLPAVVPAGPDNPLGL 184

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             +     N  Y +H T +   F   +R  ++GC+R+ +  D+  WL 
Sbjct: 185 FALRLAYGNGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPSDI-EWLF 227


>gi|330945267|gb|EGH46923.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 272

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|89073704|ref|ZP_01160218.1| hypothetical protein SKA34_11185 [Photobacterium sp. SKA34]
 gi|89050479|gb|EAR55971.1| hypothetical protein SKA34_11185 [Photobacterium sp. SKA34]
          Length = 300

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 43/182 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  + ++VN+    L               + +GRV R+TP + + IN+ + NP W  P
Sbjct: 88  DVAHKGIVVNLAELRLYFFPKDDASKVYIFPIGIGRVGRETPSMTTSINQKVKNPTWTPP 147

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                                   ++ +          G  N 
Sbjct: 148 ASIRKE-----------------------------------HAAKGDILPAVVQAGPDNP 172

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           + + K+     +  Y +H T +   F   +R  + GC+R+ N  D   WL       ++ 
Sbjct: 173 LGNYKMRLAYGHGEYLIHGTNKD--FGIGMR-VSGGCIRM-NPWD-VEWLFPHVALGTQV 227

Query: 367 HI 368
            I
Sbjct: 228 RI 229


>gi|330977562|gb|EGH77506.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 321

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|289673230|ref|ZP_06494120.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           syringae FF5]
          Length = 311

 Score = 96.3 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 86  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 145

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 146 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 170

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 171 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 213


>gi|28869470|ref|NP_792089.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28852712|gb|AAO55784.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 321

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|213968114|ref|ZP_03396259.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           T1]
 gi|301384911|ref|ZP_07233329.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062889|ref|ZP_07254430.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           K40]
 gi|302135226|ref|ZP_07261216.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213927094|gb|EEB60644.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tomato
           T1]
 gi|330875585|gb|EGH09734.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330968354|gb|EGH68614.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 321

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|146329591|ref|YP_001209829.1| hypothetical protein DNO_0937 [Dichelobacter nodosus VCS1703A]
 gi|146233061|gb|ABQ14039.1| conserved hypothetical protein [Dichelobacter nodosus VCS1703A]
          Length = 296

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 41/185 (22%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+P   L     GK +     + +GR D  TP+    I     NP W  P S+
Sbjct: 82  PREGIVINLPEMRLYYFPEGKSLVYVYAIGIGREDWGTPLGVHTITEKRPNPTWTPPASL 141

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +        + G  N +  
Sbjct: 142 RAE-----------------------------------HAAKGDILPAVVEAGPNNPLGL 166

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             +   +  +  +H T +P      +R  + GC+R+     +               I++
Sbjct: 167 FAMRLSNP-SYLIHGTNKPW--GVGMR-VSHGCIRMF-PEGIKELFAMTPQGTKVNVIKQ 221

Query: 371 VVKTR 375
            +K  
Sbjct: 222 EMKVG 226


>gi|71734528|ref|YP_274260.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289629142|ref|ZP_06462096.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|298486557|ref|ZP_07004617.1| L,D-transpeptidase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|71555081|gb|AAZ34292.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159034|gb|EFI00095.1| L,D-transpeptidase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|320324946|gb|EFW81018.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329100|gb|EFW85098.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330867505|gb|EGH02214.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|331010595|gb|EGH90651.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 321

 Score = 96.3 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|330951750|gb|EGH52010.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae Cit 7]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|330888225|gb|EGH20886.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|330973775|gb|EGH73841.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|302189952|ref|ZP_07266625.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae 642]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|257486299|ref|ZP_05640340.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 319

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 94  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 154 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 178

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 179 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 221


>gi|148974051|ref|ZP_01811584.1| hypothetical protein VSWAT3_13027 [Vibrionales bacterium SWAT-3]
 gi|145965748|gb|EDK30996.1| hypothetical protein VSWAT3_13027 [Vibrionales bacterium SWAT-3]
          Length = 319

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 43/191 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+      + +++N+    L   E  K  +    V +GR+ R TP + ++I++   NP W
Sbjct: 101 LILPDTPRKGIVINLAELRLYYFEPEKNQVHVFPVGIGRIGRDTPEMITKISQKRPNPTW 160

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P+SI ++           YL+                                   G 
Sbjct: 161 TPPKSIREE-----------YLEK------------------------GIELPKVVPAGP 185

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPT 362
            N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +  +  
Sbjct: 186 ENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQVSRG 240

Query: 363 WSRYHIEEVVK 373
                I E +K
Sbjct: 241 EQVTFINEPIK 251


>gi|118581595|ref|YP_902845.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118504305|gb|ABL00788.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 346

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 67/239 (28%), Gaps = 78/239 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRV------DRQTPILHSRINRIMFNPYWVIPRS 249
           +++NIP  +L   + GK+     V +G+       D  TP    R+     +P W +PRS
Sbjct: 141 IVINIPDRTLYYFKEGKLTTSLPVALGQPQKGATYDWMTPTGKFRVVAKQTDPTWYVPRS 200

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I  +                                         +      PG  N + 
Sbjct: 201 IRSE-----------------------------------MEARGKDVKTVVPPGPRNPLG 225

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYH 367
              I+        +H T  P       RF + GC+RV    + D    +  +TP      
Sbjct: 226 KYAIKTSLP-GILIHSTTRPGSI---YRFASHGCIRVYPEQMKDFFNEVRVNTPGE---- 277

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISA--WSPKDSII--QFRDDIYGLDNVHVGIIPL 422
                                  +Y        ++  +  +   D YG   V +  +  
Sbjct: 278 ----------------------IIYQPVKLAVTEEGRVFLEVHHDAYGR-GVELHALAR 313


>gi|260769654|ref|ZP_05878587.1| hypothetical protein VFA_002712 [Vibrio furnissii CIP 102972]
 gi|260614992|gb|EEX40178.1| hypothetical protein VFA_002712 [Vibrio furnissii CIP 102972]
 gi|315182349|gb|ADT89262.1| hypothetical protein vfu_B01066 [Vibrio furnissii NCTC 11218]
          Length = 308

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 65/197 (32%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L   E     +    V +GR+ R TP + + I++   NP W  P+SI Q+ 
Sbjct: 96  IVVNLAELRLYYFEPETRKVHIFPVGIGRIGRDTPEMETVISQKRPNPTWTPPQSIRQE- 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                     YL                                    G  N +    + 
Sbjct: 155 ----------YLAK------------------------GIELPAVVPAGPENPLGEYALR 180

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               N  Y +H T +   F   +R  +SGC+R+ +  D+  WL +      +  I     
Sbjct: 181 LGYGNGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPKDI-EWLFQQVQRGEKVRIIN--- 232

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 233 --EPVKVALEPDRSVFV 247


>gi|66045310|ref|YP_235151.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
 gi|63256017|gb|AAY37113.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. syringae B728a]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|163800189|ref|ZP_02194090.1| hypothetical protein 1103602000595_AND4_05899 [Vibrio sp. AND4]
 gi|159175632|gb|EDP60426.1| hypothetical protein AND4_05899 [Vibrio sp. AND4]
          Length = 308

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L        V     V +GR+ R TP + + I++   NP W
Sbjct: 94  LILPDVPHKGIVINLAELRLYYFPPKQNVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPSSIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     +  Y +H T +   F   +R  +SGC+R+ +  D+  WL       
Sbjct: 179 DNPLGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPSDI-EWLFDKVRRG 233

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
            +  I       +   V L  +  V  
Sbjct: 234 EKVKIIN-----QPVKVTLEPDRSVFV 255


>gi|325131741|gb|EGC54443.1| ErfK/YbiS/YcfS/YnhG family [Neisseria meningitidis M6190]
          Length = 207

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 73/228 (32%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V +NIP   L    +GK+     V VGR   QT +   +I    +NP W IP+SI ++
Sbjct: 47  QHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKSIQKE 106

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +     G  N +    +
Sbjct: 107 R---------------------------------------GDGVKTIAAGPDNPLGPVFV 127

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                     +H T  P          + GCVR+++   L                 + +
Sbjct: 128 RLGDPKLGLGIHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTI 170

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDS-----IIQFRDDIYGLDNV 415
            +     V          +Y  A   +D+     +  FR D YG +N+
Sbjct: 171 ASGSPASV----------IYQMAGLNEDADRNLWLAAFR-DPYGKNNL 207


>gi|307544802|ref|YP_003897281.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581]
 gi|307216826|emb|CBV42096.1| ErfK/YbiS/YcfS/YnhG family protein [Halomonas elongata DSM 2581]
          Length = 396

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 46/174 (26%)

Query: 190 KMGLRYVLVNIPAASLEAV---ENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            +  + +++N+    L      ++G+        + VGR D +TP+ ++ I +++ NP W
Sbjct: 147 DVPRKGIVINVAEMRLYYYPPAKDGEPRTVQTYPLGVGRQDWETPLGNTTITQMVKNPAW 206

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI Q+                                   ++            G 
Sbjct: 207 YPPESIRQE-----------------------------------HAAAGDPLPSVVPAGP 231

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
            N + + K+         +H T +P      +R  + GCVR+   +   L   +
Sbjct: 232 NNPLGTRKMRLGIP-GYLIHGTNKPE--GVGMR-VSHGCVRMLPDDAEALFDQI 281


>gi|156976350|ref|YP_001447256.1| hypothetical protein VIBHAR_05123 [Vibrio harveyi ATCC BAA-1116]
 gi|156527944|gb|ABU73029.1| hypothetical protein VIBHAR_05123 [Vibrio harveyi ATCC BAA-1116]
          Length = 308

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 65/207 (31%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L        V     V +GR+ R TP + + I++   NP W
Sbjct: 94  LILPDVPHKGIVINLAELRLYYFPAKENVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPSSIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     +  Y +H T +   F   +R  +SGC+R+ +  D+  WL       
Sbjct: 179 DNPLGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSSGCIRM-DPNDI-EWLFDKVRRG 233

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
            +  I       +   V L  +  V  
Sbjct: 234 EKVKIIN-----QPVKVTLEPDRSVFV 255


>gi|237803632|ref|ZP_04591217.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331025614|gb|EGI05670.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 321

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGMS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|258544154|ref|ZP_05704388.1| ErfK/YbiS/YcfS/YnhG family protein [Cardiobacterium hominis ATCC
           15826]
 gi|258520596|gb|EEV89455.1| ErfK/YbiS/YcfS/YnhG family protein [Cardiobacterium hominis ATCC
           15826]
          Length = 300

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+P   L     G+ V     + +GR    TP     I     NP W  P 
Sbjct: 89  DAPREGIVINLPEMRLYYYPPGQNVVHVFAIGIGREGWATPKGILSIADKRANPTWTPPA 148

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI  +                                   ++            G  N +
Sbjct: 149 SIRAE-----------------------------------HAANGDPLPPVVPAGPDNPL 173

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +   +  +  +H T +P      +R  + GC+R+    I +L   +   T 
Sbjct: 174 GLFAMRLSNP-SYLLHGTNKPE--GVGMR-VSHGCIRLYPEGIEELFGMVAPGTK 224


>gi|262403202|ref|ZP_06079762.1| hypothetical protein VOA_001186 [Vibrio sp. RC586]
 gi|262350701|gb|EEY99834.1| hypothetical protein VOA_001186 [Vibrio sp. RC586]
          Length = 306

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+    NP W  P S+ ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKNPTWTPPESVRRE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             +  +          G  N +    + 
Sbjct: 154 ----------------------------------HKAKGDILPAVVPAGPDNPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLFQQVERGEKVRIIN--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 232 --EPIKVALEPDRSVFI 246


>gi|90422766|ref|YP_531136.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90104780|gb|ABD86817.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 329

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 34/268 (12%)

Query: 114 LRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVD 170
           L  +L +  D        +   F   VE A+  +   + L P   +       +     D
Sbjct: 45  LAVKLQVLLDRAHFSPGEIDGRFGENVEKALAAYAEANALPPGKALTPEIWAKLKANSGD 104

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQ 227
             + Q  +    +K     K+  +          L      E        +  +      
Sbjct: 105 PVLAQYTLTAQDLKGPFLAKLPAKM-EQMKTLKHLNYTGPKEALSERFHISQELLAELNP 163

Query: 228 TPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---------- 275
               +   +   I+  P   +P    + ++    +    + +D ++              
Sbjct: 164 GQKFNRAGDAITIVSLPPEAMPTPATRLEVDKERQTVKAFAQDGSLLAFYPASVGSEEKP 223

Query: 276 --EKGKEVFVEEVDWNSPEPPNF---------IFRQDPGKINAMASTKIEFYSRNNTYMH 324
                 +V   + + N    P +          F   PG  N + +  I         +H
Sbjct: 224 TPSGALKVDTVDANPNYRYNPKYKFSGVKSKKPFNIKPGPNNPVGAMWIGLSEP-GYGIH 282

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDL 352
            T +P   +      + GCVR+ N   L
Sbjct: 283 GTADPSRVSKSD---SHGCVRLTNWDVL 307


>gi|196231301|ref|ZP_03130160.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196224637|gb|EDY19148.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 322

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 85/302 (28%), Gaps = 71/302 (23%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS------------------STLEAM 165
           L     +      +V  A+K +Q  HGL  +G++D+                    L+ +
Sbjct: 46  LFGPGKIDGRPGEFVGKALKRYQRAHGLPETGVLDANIPIDSVYPVYTFYTFKDEDLKFV 105

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA--------SLEAVENGKVGLRS 217
                    Q ++  +    LL+      +     P          +LEA++ G      
Sbjct: 106 GPSPTKPEEQCKLKYLPYASLLDFATERYHC---APEFLAKINKGVNLEALKPGDQIRVP 162

Query: 218 TVIVGRVDRQT--------PILHSRINRIMFNPYW-----------VIPRSIIQKDMMAL 258
            V    ++           P   +R+ +I  N               +P   I   +M  
Sbjct: 163 NVEPFVIEDLPKQGFLPEKPEYKNRVIQIHRNEKLLDVMDGDALLATVP---ITPGIMGG 219

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
             ++        + +            ++        +      G  N +    I   ++
Sbjct: 220 GAKETPAGSWKILGIATSPTFRWDKGVLEEGKRTENFYNL--PAGPRNPVGVLWIGL-NK 276

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
               +H T  P       R ++ GC+RV N              W    I +++    T 
Sbjct: 277 PGIGIHGTSNPQTIG---RAQSHGCMRVAN--------------WDVVRISKLITKGMTV 319

Query: 379 PV 380
            +
Sbjct: 320 II 321


>gi|134300529|ref|YP_001114025.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
 gi|134053229|gb|ABO51200.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
          Length = 315

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 71/261 (27%), Gaps = 78/261 (29%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+E L        +   +  +D+  + A++ +Q  H L   G+VD  T    
Sbjct: 51  MQGKDVVDLQEELKALNYY--NGPTNGIYDSLTQRALRKYQQDHYLKNDGVVDWETW--- 105

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                     L +NL +     E+ +                           +I+    
Sbjct: 106 --------HSLALNLEKPVTKSEKTLPPTGD--------------------MAIIIDTTT 137

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
           R+  +L        FN     P +                             + V    
Sbjct: 138 RKLTVLSDGKPYTQFNVACGKPSTPS----------------------PVGSWQVVHKAT 175

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCV 344
            +W +                   +  +          +H T +P    +   + + GC+
Sbjct: 176 -NWGT----------------GFGTRWLGLNVPWGKYGIHGTNKPFSIGS---YASHGCI 215

Query: 345 RVRN--IIDLDVWLLKDTPTW 363
           R+ N  +  L  W+ K TP +
Sbjct: 216 RMHNSSVEKLYPWIPKGTPVY 236



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V  ++  L   G       +   F   +E+ +K F+  +GL     VDS
Sbjct: 250 KKLVRGDRGADVFEVQRTLKRLGYY--EAQIDGIFGYSMEAGIKKFRKANGLPMDNFVDS 307

Query: 160 STLEAMN 166
              +A+ 
Sbjct: 308 KMYKALG 314


>gi|269962801|ref|ZP_06177142.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832491|gb|EEZ86609.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 308

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 65/207 (31%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L        V     V +GR+ R TP + + I++   NP W
Sbjct: 94  LILPDVPHKGIVINLAELRLYYFPAKENVVHVFPVGIGRIGRDTPEMTTSISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPSSIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     +  Y +H T +   F   +R  ++GC+R+ +  D+  WL       
Sbjct: 179 DNPLGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPNDI-EWLFDKVRRG 233

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
            +  I       +   V L  +  V  
Sbjct: 234 EKVKIIN-----QPVKVTLEPDRSVFV 255


>gi|153008375|ref|YP_001369590.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151560263|gb|ABS13761.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 488

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 65/258 (25%), Gaps = 30/258 (11%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI- 183
                +     + V+ A   +    G   +   +++    +         +  +    + 
Sbjct: 225 ASPGVIDGRSGSNVDKAAAAYGELTGKSINPTDEAAVNAELEATGGPAFTEYTITNEDVG 284

Query: 184 KKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR-IMFN 241
           ++ +            +PA       E             +        +   +   + N
Sbjct: 285 RQYVASIPEDYAHKAQLPAMAYTSVTEMLGEKFHIDETYLKEINPGVNFNQPGSIVKIPN 344

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVEE----------VDWN 289
               +   + +       +Q   Y +   + +      G                 ++ N
Sbjct: 345 LGKPVRTKVARIIADKGRKQVRGYDEAGKLVVAYPSTIGSSDNPSPSGVVQVERIAINPN 404

Query: 290 SPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
               P   F+Q          PG    + +  I         +H TPEP          +
Sbjct: 405 YTYNPKINFKQGNNDKVLTIPPGPNGPVGTVWIALSKP-TYGIHGTPEPSRIGKTS---S 460

Query: 341 SGCVRVRN--IIDLDVWL 356
            GCVR+ N    +L   +
Sbjct: 461 HGCVRLTNWDAEELAKLV 478


>gi|218675980|ref|YP_002394799.1| hypothetical protein VS_II0198 [Vibrio splendidus LGP32]
 gi|218324248|emb|CAV25529.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 300

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+      + +++N+    L   E  K  +    V +GRV R TP + ++I++   NP W
Sbjct: 82  LILPDTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTW 141

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI ++           YL+                                   G 
Sbjct: 142 TPPNSIRKE-----------YLEK------------------------GIELPKVVPAGP 166

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +     
Sbjct: 167 ENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQ---V 218

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
           SR     ++   +   V L  +  V  
Sbjct: 219 SRGEQVTIID--EPIKVSLEPDRSVFV 243


>gi|86144591|ref|ZP_01062923.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
 gi|85837490|gb|EAQ55602.1| uncharacterized protein conserved in bacteria [Vibrio sp. MED222]
          Length = 296

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+      + +++N+    L   E  K  +    V +GRV R TP + ++I++   NP W
Sbjct: 78  LILPDTPRKGIVINLAELRLYFFEPEKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTW 137

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI ++           YL+                                   G 
Sbjct: 138 TPPNSIRKE-----------YLEK------------------------GIELPKVVPAGP 162

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +        Y +H T +   F   +R  +SGC+R+    D+  WL +     
Sbjct: 163 ENPLGEYALRLAYGAGDYLIHGTNKD--FGIGLR-VSSGCIRME-PKDI-EWLFEQ---V 214

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
           SR     ++   +   V L  +  V  
Sbjct: 215 SRGEQVTIID--EPIKVSLEPDRSVFV 239


>gi|330988430|gb|EGH86533.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 321

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 42/167 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPDVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            K          +H + +   F   +R  + GC R+   N+++L   
Sbjct: 181 FKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVLELADM 223


>gi|307293274|ref|ZP_07573120.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306881340|gb|EFN12556.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 362

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 75/305 (24%), Gaps = 73/305 (23%)

Query: 124 LDPSKGLSVAFDAY----VESAVKLFQMRHGLDPSGMVDSSTLEAM---NVPVDLRIRQL 176
           LD +       D        +A+K FQ   GL  +G  D +T   +          + ++
Sbjct: 71  LDRAGFSPGVLDGKEGMSFTTALKGFQQARGLPATGQYDEATARTLMGDRPQPATWLVKI 130

Query: 177 QVNLMRIKKL-LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
                +     + + +  +  L          +E       +   V              
Sbjct: 131 PTGFAKGPFFAVPKDLNDQAQLP--ALGYRNLLEKLAERFHTRPEVLLALNPPNTKVGAG 188

Query: 236 NRIMFNPYWVIPRSIIQKD-----------------------MMALLRQDPQYLKDNNIH 272
             I        P + I+ D                       ++       +     N  
Sbjct: 189 ATIRVPAIANQPVARIEGDERGWGAMLASLGVAKDQPQADHIVVDKSDGVLRVYDAQNRL 248

Query: 273 MI---DEKGKEVFVEEVD-------------------WNSPEPPNFIFRQDPGKINAMAS 310
           +       G +     +                    +      +      PG    +  
Sbjct: 249 IAQFPATMGSQHDPLPIGTWEIKGLSRNPDFHYNPDLFWDASSSDQKAVLKPGPNGPVGV 308

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             I+    +   +H TPEP       R E+ GC+R+ N              W    + +
Sbjct: 309 VWIDLSKPH-YGIHGTPEPQTIG---RAESHGCIRLTN--------------WDAARLAQ 350

Query: 371 VVKTR 375
           +V++ 
Sbjct: 351 MVQSG 355


>gi|291458271|ref|ZP_06597661.1| putative peptidoglycan binding domain protein [Oribacterium sp.
           oral taxon 078 str. F0262]
 gi|291418804|gb|EFE92523.1| putative peptidoglycan binding domain protein [Oribacterium sp.
           oral taxon 078 str. F0262]
          Length = 570

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L    +   V++ ++ +    +++         VD          SK       +     
Sbjct: 117 LAPVNLTVGVINSVVRDLQQRLMD----LGYMDVDEPTTYYGDATSKAVQYFQRQVGMPM 172

Query: 86  QDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             I     W  L     P     LG     +  ++ RL   G L  +  ++ +FDA  E+
Sbjct: 173 DGITGVSTWDALMADSAPHYAAKLGFQGNDITNVQYRLYNLGYLTEASQINGSFDAVTET 232

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           AVK  Q  +GL   G V  ST + +    +++   + +
Sbjct: 233 AVKKMQEVNGLKVDGTVGQST-DELLYSDNVKANIIAL 269



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 19/156 (12%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           L    ++    I      +I+ +    ++   + +  A  +           + T     
Sbjct: 256 LLYSDNVKANIIALGEQSDIVKKYQARLIALGYMSGSADGN---------FGQSTQNAIR 306

Query: 80  KAIAFYQDILSRGGWPEL-------PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
              +    I+     P+          +P  + LG  S  V  L++ L   G L      
Sbjct: 307 AFQSRNDQIVDGYLGPDTRASLDSDSAKPYGMRLGEQSDEVANLQKLLAKYGYLPQE-KA 365

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S  F    + AV  FQ R+GL+  GM  + TL  + 
Sbjct: 366 SGYFGELTKQAVADFQSRNGLNADGMAGAQTLAKLG 401



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    + LG  S  V++ + RLI  G +  S      F    ++A++ FQ R+     G 
Sbjct: 262 VKANIIALGEQSDIVKKYQARLIALGYMSGSA--DGNFGQSTQNAIRAFQSRNDQIVDGY 319

Query: 157 VDSSTLEAMNVPVDLR 172
           +   T  +++      
Sbjct: 320 LGPDTRASLDSDSAKP 335


>gi|153831567|ref|ZP_01984234.1| ErfK/YbiS/YcfS/YnhG [Vibrio harveyi HY01]
 gi|148872077|gb|EDL70894.1| ErfK/YbiS/YcfS/YnhG [Vibrio harveyi HY01]
          Length = 308

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 65/207 (31%), Gaps = 47/207 (22%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L+   +  + +++N+    L        V     V +GR+ R TP + + I++   NP W
Sbjct: 94  LILPDVPHKGIVINLAELRLYYFPAKENVVHIFPVGIGRIGRDTPEMTTSISQKRPNPTW 153

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P SI  +                                      +  +       G 
Sbjct: 154 TPPSSIRAE-----------------------------------YKAKGIDLPAVVPAGP 178

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     +  Y +H T +   F   +R  ++GC+R+ +  D+  WL       
Sbjct: 179 DNPLGMFALRLAYGHGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPNDI-EWLFDKVRRG 233

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHF 390
            +  I       +   V L  +  V  
Sbjct: 234 EKVKIIN-----QPVKVTLEPDRSVFV 255


>gi|49083720|gb|AAT51122.1| PA2854 [synthetic construct]
          Length = 324

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 40/160 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI
Sbjct: 94  PREGVVINLAEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +         PG  N +  
Sbjct: 154 RAE-----------------------------------HAADGDPLPTVVPPGPDNPLGP 178

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            K+         +H + +   F    R  + GC R+ N  
Sbjct: 179 YKLTLGVP-GYLIHGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|15598050|ref|NP_251544.1| hypothetical protein PA2854 [Pseudomonas aeruginosa PAO1]
 gi|107102403|ref|ZP_01366321.1| hypothetical protein PaerPA_01003465 [Pseudomonas aeruginosa PACS2]
 gi|116050857|ref|YP_790320.1| hypothetical protein PA14_27180 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890947|ref|YP_002439813.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           LESB58]
 gi|254235841|ref|ZP_04929164.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254241520|ref|ZP_04934842.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296388659|ref|ZP_06878134.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           PAb1]
 gi|313108000|ref|ZP_07794167.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           39016]
 gi|9948942|gb|AAG06242.1|AE004712_2 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586078|gb|ABJ12093.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126167772|gb|EAZ53283.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126194898|gb|EAZ58961.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218771172|emb|CAW26937.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           LESB58]
 gi|310880669|gb|EFQ39263.1| putative ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas aeruginosa
           39016]
          Length = 323

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 40/160 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI
Sbjct: 94  PREGVVINLAEYRLYYYPKGQNVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +         PG  N +  
Sbjct: 154 RAE-----------------------------------HAADGDPLPTVVPPGPDNPLGP 178

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            K+         +H + +   F    R  + GC R+ N  
Sbjct: 179 YKLTLGVP-GYLIHGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|269104415|ref|ZP_06157111.1| hypothetical protein VDA_000572 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161055|gb|EEZ39552.1| hypothetical protein VDA_000572 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 300

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 41/181 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +    V +N+    L               + +GRV R+TP + + I++ + +P W  P
Sbjct: 88  NVPHNGVTINLAELRLYYFPKDDPSKVYVFPIGIGRVGRETPSMTTSISQKIRHPTWT-P 146

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            + I+K+  A                                             G  N 
Sbjct: 147 TANIRKEYAAK----------------------------------GVTLPPVVAAGPNNP 172

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +    +     +  Y+  +     F   +R  +SGC+R+ N  D+  WL    P  +   
Sbjct: 173 LGDYAMRLAYGHGEYLIHSTNKD-FGIGMR-VSSGCIRM-NPWDI-EWLFPQIPKGTPVR 228

Query: 368 I 368
           I
Sbjct: 229 I 229


>gi|238020377|ref|ZP_04600803.1| hypothetical protein GCWU000324_00257 [Kingella oralis ATCC 51147]
 gi|237867357|gb|EEP68363.1| hypothetical protein GCWU000324_00257 [Kingella oralis ATCC 51147]
          Length = 331

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 63/232 (27%), Gaps = 67/232 (28%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             V++NIP   L   ++G +     V VG+   QT I   +I    FNP W IP SI ++
Sbjct: 50  YQVVINIPQQRLFLFKDGSLKKVYPVGVGKAMSQTNIGEHKIGAKAFNPTWHIPLSIQKE 109

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                    + +    PG  N +    +
Sbjct: 110 R---------------------------------------GDGVKSVPPGPKNPLGPVFV 130

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
              +      +H T  P          + GCVR+++   L                 + +
Sbjct: 131 RLGNPKLGLGIHGTSNPASV---PGVVSHGCVRMKSPDAL--------------EFAKTI 173

Query: 373 KTRKTTPVKLATEVPVHFVYISAWSPKDSI--IQFRDDIYGLDNVHVGIIPL 422
            T     V     + ++               +    D Y    +    +  
Sbjct: 174 HTGSPATVS-YERIALN-------QDDAGNLWLAVFRDPYKKGALKTSTLKQ 217


>gi|261251523|ref|ZP_05944097.1| hypothetical protein VIA_001544 [Vibrio orientalis CIP 102891]
 gi|260938396|gb|EEX94384.1| hypothetical protein VIA_001544 [Vibrio orientalis CIP 102891]
          Length = 301

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 62/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   E     +    V +GRV R TP + + I++   NP W  P SI ++ 
Sbjct: 93  IVINLAELRLYYFEPEINKVHIFPVGIGRVGRDTPEMKTTISQKRPNPTWTPPTSIRKE- 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +          G  N +    + 
Sbjct: 152 ----------------------------------YAAKGIELPAVVPAGPENPLGEYALR 177

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  +     
Sbjct: 178 LSYGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-EWLFPQVKLGEKVRVIN--- 229

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 230 --EPIKVALEPDRSVFL 244


>gi|167032930|ref|YP_001668161.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
 gi|166859418|gb|ABY97825.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
          Length = 325

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRLYYFPKGQNVVHTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 156 RKE-----------------------------------HAADGDILPAVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|90413965|ref|ZP_01221950.1| hypothetical protein P3TCK_07866 [Photobacterium profundum 3TCK]
 gi|90325027|gb|EAS41542.1| hypothetical protein P3TCK_07866 [Photobacterium profundum 3TCK]
          Length = 301

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 52/267 (19%)

Query: 115 RERLIISGDLDPSKGLSVAF-----DAYVESAVKLFQMRHG-----LDPSGMVDSSTLEA 164
           R  L++   L  +   ++ +     D+ +   V+ +++  G     +     V    L A
Sbjct: 3   RSILLVLTCLASTAANAIEYQLPNDDSNIVGTVEYYEVAKGDSLADIANKYNVGFLALLA 62

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVG 222
            N  VD  +      L    K++   +  + +++N+    L     ++  +     + +G
Sbjct: 63  ANKGVDPFLPTPGQLLTVPTKVILPNVKRKGIIINLAELRLYYFPEDDKSIVYIFPIGIG 122

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           RV R TP + +++++ + NP W    +I ++           Y +  +I +         
Sbjct: 123 RVGRATPNMITKVSQKIENPTWTPTANIRKE-----------YREKKDIEL--------- 162

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
                               G  N +    +        Y +H T +   F   +R  +S
Sbjct: 163 --------------PAVVPAGPENPLGEYAMRLAYSRGEYLIHGTNKD--FGIGMR-VSS 205

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHI 368
           GC+R+ N  D+  WL    P  +   I
Sbjct: 206 GCIRM-NPWDI-EWLFPQVPRGTSVQI 230


>gi|113475770|ref|YP_721831.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
 gi|110166818|gb|ABG51358.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
          Length = 219

 Score = 93.6 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 72/218 (33%), Gaps = 58/218 (26%)

Query: 146 QMRHG---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           Q  +G   +    +VD++  + +     ++ + + +    + KL  +      +++ +  
Sbjct: 43  QQVYGYTPIKNKSVVDTNGKKLIAKTPKIKPKSITIKKA-LNKLYIKPNETISLVIKLSD 101

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +   +N ++     + +G+   +TP    ++ + + NP W  P +    +++      
Sbjct: 102 RRVYVYKNDQLKTSYPIAIGKEGWETPTGTHKVIQKIPNPSWTHPFT---GEIIP----- 153

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNN 320
                                                  PG  N +    I F+    N 
Sbjct: 154 ---------------------------------------PGPENPLGERWIGFWTDGTNY 174

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
              H TP            + GCVR+  ++++DL   +
Sbjct: 175 IGFHGTPNEETVGQ---AASHGCVRMFNQDVLDLFEKV 209


>gi|92109380|ref|YP_571668.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91802462|gb|ABE64836.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 320

 Score = 93.6 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 68/261 (26%), Gaps = 31/261 (11%)

Query: 117 RLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           RL +  D        +   F    + A++ ++    L  S  V       +       I 
Sbjct: 27  RLQVLLDRAHFSPGEIDGVFGENAKKALRAYEEAQQLPSSDNVSVEAWRKLATDDRPVIA 86

Query: 175 QLQVNLMRIKKLLEQKMGLR-YVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
              +    I      K+  +   +  IP  + + A E        +  +         + 
Sbjct: 87  NHTIMDRDIAGPFLHKLPAKLEEMKGIPKLSYVSAREGLAEKFHVSEDLLVALNPGRHID 146

Query: 233 SRINRIMFNPYWV--IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFVE---- 284
                I+        IP+   + ++    +    + K N +        G E        
Sbjct: 147 RAGVTIVVIDTGTGQIPKKAAKVEVDKKRQTVKLFDKSNGLIGFYPATVGSEEKPSLSGT 206

Query: 285 -------EVDWNSPEPPNF--------IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
                          P  +         F   PG  N + +  I         +H T  P
Sbjct: 207 LKVTTVKRNPTYHYNPAYYFGGVHSRKPFTIAPGPNNPVGTVWISLSGE-GYGVHGTSSP 265

Query: 330 ILFNNVVRFETSGCVRVRNII 350
              +      + GC+R+ N  
Sbjct: 266 GKVSKSE---SHGCIRLTNWD 283


>gi|300114963|ref|YP_003761538.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
 gi|299540900|gb|ADJ29217.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
          Length = 356

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 46/177 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-----VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             R +++N+    L              +   + +GR    TP+  + +     NP WV 
Sbjct: 102 PRRGIVINLAEMRLYYFPEPSSAQPSTVVTHPIGIGREGWSTPLGRTSVISKKKNPAWVP 161

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   ++ +      R  PG  N
Sbjct: 162 PESIRAE-----------------------------------HAADGNPLPKRVPPGPDN 186

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    +         +H T  P      +R  + GC+R+   +I+ L   +   TP
Sbjct: 187 PLGKFAMRLGMP-GYLIHGTNRPW--GVGMR-VSHGCIRLYPEDILGLFSQVKVGTP 239


>gi|77460233|ref|YP_349740.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens Pf0-1]
 gi|77384236|gb|ABA75749.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 323

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI H+ I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRLYYYPKGRNVVYTFPLGIGREGWGSPIAHTTITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
            K    +     +H + +   F   +R  + GC R+   N++++   +   T        
Sbjct: 181 FKFTLGTP-GYLIHGSNKK--FGIGMRT-SHGCFRMFNNNVLEMASMVPVGTSVRILNDA 236

Query: 369 EEVVKTRKTTPVKLATEV 386
            +  ++     ++  T +
Sbjct: 237 YKFGRSGGKIYLEAHTPI 254


>gi|323494305|ref|ZP_08099417.1| hypothetical protein VIBR0546_07107 [Vibrio brasiliensis LMG 20546]
 gi|323311468|gb|EGA64620.1| hypothetical protein VIBR0546_07107 [Vibrio brasiliensis LMG 20546]
          Length = 301

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 47/203 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+    L   E     +    V +GRV R TP + ++I++   NP W  P 
Sbjct: 87  NVERQGIVINLAELRLYYFEPEINKVHIFPVGIGRVGRDTPEMVTKISQKRPNPTWTPPA 146

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI +K+ +A                                             G  N +
Sbjct: 147 SI-RKEYLAK----------------------------------GIELPAVVPAGPENPL 171

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T +   F   +R  +SGC+R+ +  D+  WL        +  
Sbjct: 172 GEYALRLAHGAGDYLIHGTNKD--FGIGLR-VSSGCIRM-DPKDI-EWLFPQVKLGEQVR 226

Query: 368 IEEVVKTRKTTPVKLATEVPVHF 390
           +       +   V L  +  V  
Sbjct: 227 VIN-----EPIKVALEPDRSVFL 244


>gi|92113690|ref|YP_573618.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
 gi|91796780|gb|ABE58919.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
          Length = 387

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 58/179 (32%), Gaps = 46/179 (25%)

Query: 190 KMGLRYVLVNIPAASLEAV---ENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                 V+VNIP   L      + G+        + VGR+D  TP+  +RI     NP W
Sbjct: 134 DTPYEGVVVNIPEMRLYYYPPRKEGEPQRVETYAISVGRMDWSTPLGETRITAKQENPPW 193

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P+SII++                                   ++ +         PG 
Sbjct: 194 YPPQSIIEE-----------------------------------HAADGRELPDVVPPGP 218

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            N +   K+         +H T  P      +R  T GC+R+   ++  L   L   T 
Sbjct: 219 DNPLGKYKMRLGLP-GYLIHGTNRPQ--GVGMR-VTHGCIRMFPEDVEHLFGQLPVGTK 273


>gi|170749343|ref|YP_001755603.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170655865|gb|ACB24920.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 370

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 30/292 (10%), Positives = 66/292 (22%), Gaps = 44/292 (15%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              + + +  L  +        +          A+  F +  GL  S  +     + +  
Sbjct: 79  DPLIVKAQVLLDRAHFYP--GAIDGRKGDNYRHALSAFAVAQGLPASEDLTPEIWDKLQA 136

Query: 168 PVDLRIRQ-LQVNLMRIKKLLEQKMGLRYVLVN--IPAASLEAVENGKVGLRSTVIVGRV 224
             D        +          +++  +                E        +  +   
Sbjct: 137 TSDKPAVTDYTLTESDAAGPYVERIPPKMEEQAELKTLGYTNPREMLAERFHMSRDLVSA 196

Query: 225 DRQTPILHSRINRIMFNPY------------WVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                 L      I                       + + ++    R    +  D  + 
Sbjct: 197 LNPGKPLDKAGTTIAVAAVEPMGTDKPKAKDLPQEPKVERIEVDKTSRDVRAFGADGKLL 256

Query: 273 MID------------EKGKEVFVEEVDWNSPEPPNFIFR---------QDPGKINAMAST 311
                              +V     D +    P + F+            G  N +   
Sbjct: 257 AYYPASIGSSEKPAPSGETKVKGVAFDPDYTYNPKYAFKGVKAQHKFTIQSGPNNPVGLV 316

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTP 361
            I+     +  +H TPEP          + GC+R+   N  DL   + +   
Sbjct: 317 WIDLAIP-SYGIHGTPEPEKVGKTE---SHGCIRLTNWNARDLAAHVTRGAK 364


>gi|152986703|ref|YP_001347671.1| hypothetical protein PSPA7_2300 [Pseudomonas aeruginosa PA7]
 gi|150961861|gb|ABR83886.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 323

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 40/160 (25%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     G+ V     + +GR    +PI ++RI     +P W  P SI
Sbjct: 94  PREGVVINLAEYRLYYYPKGQDVVHTYPLGIGREGWGSPIANTRITAKTKDPAWYPPASI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +         PG  N +  
Sbjct: 154 RAE-----------------------------------HAADGDPLPTVVPPGPDNPLGP 178

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            K+         +H + +   F    R  + GC R+ N  
Sbjct: 179 YKLTLGVP-GYLIHGSNKK--FGIGTRT-SHGCFRMYNAD 214


>gi|183179739|ref|ZP_02957950.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|183013150|gb|EDT88450.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 305

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+     P W  P SI ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASIRKE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +  +       G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIDLPPVVPAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIIN--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 232 --EPIKVALEPDRSVFI 246


>gi|153212801|ref|ZP_01948437.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116314|gb|EAY35134.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 306

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+     P W  P SI ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASIRKE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +  +       G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIDLPPVVPAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIIN--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 232 --EPIKVALEPDRSVFI 246


>gi|226944399|ref|YP_002799472.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
 gi|226719326|gb|ACO78497.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
          Length = 317

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +    ++  V     + +GR    +P+  +RI   + +P W  P+SI
Sbjct: 92  PREGIIINLAEYRMYYFPKDQNVVHTYPLGIGREGWGSPVAETRITGKIKDPAWYPPKSI 151

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 152 REE-----------------------------------HAADGDPLPTVVPAGPDNPLGP 176

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N++ L   +   T 
Sbjct: 177 FKFTLGLS-GYLIHGSNKK--FGIGMR-VSHGCFRMLNHNVLQLADMVPVGTK 225


>gi|15600829|ref|NP_232459.1| hypothetical protein VCA0058 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|121585891|ref|ZP_01675684.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121730222|ref|ZP_01682608.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147671464|ref|YP_001214920.1| hypothetical protein VC0395_0079 [Vibrio cholerae O395]
 gi|153820063|ref|ZP_01972730.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153827505|ref|ZP_01980172.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227811686|ref|YP_002811696.1| hypothetical protein VCM66_A0055 [Vibrio cholerae M66-2]
 gi|229506766|ref|ZP_04396275.1| hypothetical protein VCF_001990 [Vibrio cholerae BX 330286]
 gi|229510439|ref|ZP_04399919.1| hypothetical protein VCE_001845 [Vibrio cholerae B33]
 gi|229514568|ref|ZP_04404029.1| hypothetical protein VCB_002218 [Vibrio cholerae TMA 21]
 gi|229517430|ref|ZP_04406875.1| hypothetical protein VCC_001453 [Vibrio cholerae RC9]
 gi|229522730|ref|ZP_04412146.1| hypothetical protein VIF_003296 [Vibrio cholerae TM 11079-80]
 gi|229526305|ref|ZP_04415709.1| hypothetical protein VCA_000424 [Vibrio cholerae bv. albensis
           VL426]
 gi|229527953|ref|ZP_04417344.1| hypothetical protein VCG_001031 [Vibrio cholerae 12129(1)]
 gi|229605240|ref|YP_002875944.1| hypothetical protein VCD_000180 [Vibrio cholerae MJ-1236]
 gi|254284784|ref|ZP_04959751.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254850325|ref|ZP_05239675.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746115|ref|ZP_05420062.1| hypothetical protein VCH_002489 [Vibrio cholera CIRS 101]
 gi|262158602|ref|ZP_06029716.1| hypothetical protein VIG_001835 [Vibrio cholerae INDRE 91/1]
 gi|262168986|ref|ZP_06036680.1| hypothetical protein VIJ_002194 [Vibrio cholerae RC27]
 gi|297579802|ref|ZP_06941729.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298499923|ref|ZP_07009729.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657441|gb|AAF95972.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549827|gb|EAX59847.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628026|gb|EAX60576.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126509398|gb|EAZ71992.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|146313847|gb|ABQ18387.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|149738568|gb|EDM52923.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150425569|gb|EDN17345.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227010828|gb|ACP07039.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014690|gb|ACP10899.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229334315|gb|EEN99800.1| hypothetical protein VCG_001031 [Vibrio cholerae 12129(1)]
 gi|229336463|gb|EEO01481.1| hypothetical protein VCA_000424 [Vibrio cholerae bv. albensis
           VL426]
 gi|229340715|gb|EEO05721.1| hypothetical protein VIF_003296 [Vibrio cholerae TM 11079-80]
 gi|229345466|gb|EEO10439.1| hypothetical protein VCC_001453 [Vibrio cholerae RC9]
 gi|229348548|gb|EEO13506.1| hypothetical protein VCB_002218 [Vibrio cholerae TMA 21]
 gi|229352884|gb|EEO17824.1| hypothetical protein VCE_001845 [Vibrio cholerae B33]
 gi|229357117|gb|EEO22035.1| hypothetical protein VCF_001990 [Vibrio cholerae BX 330286]
 gi|229371726|gb|ACQ62148.1| hypothetical protein VCD_000180 [Vibrio cholerae MJ-1236]
 gi|254846030|gb|EET24444.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255735869|gb|EET91267.1| hypothetical protein VCH_002489 [Vibrio cholera CIRS 101]
 gi|262022685|gb|EEY41392.1| hypothetical protein VIJ_002194 [Vibrio cholerae RC27]
 gi|262029482|gb|EEY48132.1| hypothetical protein VIG_001835 [Vibrio cholerae INDRE 91/1]
 gi|297535448|gb|EFH74282.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297541904|gb|EFH77955.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327485292|gb|AEA79698.1| hypothetical protein VCLMA_B0050 [Vibrio cholerae LMA3894-4]
          Length = 306

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+     P W  P SI ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASIRKE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +  +       G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIDLPPVVPAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIIN--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 232 --EPIKVALEPDRSVFI 246


>gi|153831250|ref|ZP_01983917.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|254224595|ref|ZP_04918211.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125622658|gb|EAZ50976.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|148873270|gb|EDL71405.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 306

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+     P W  P SI ++ 
Sbjct: 95  IVINLAELRLYYFRPNEGKVHIFPVGIGRIGRDTPVMQTSISSKRKYPTWTPPASIRKE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +  +       G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIDLPPVVPAGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I     
Sbjct: 180 LAYGSGEYLIHGTNKD--FGVGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIIN--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V  
Sbjct: 232 --EPIKVALEPDRSVFI 246


>gi|262164646|ref|ZP_06032384.1| hypothetical protein VMA_001090 [Vibrio mimicus VM223]
 gi|262027026|gb|EEY45693.1| hypothetical protein VMA_001090 [Vibrio mimicus VM223]
          Length = 306

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+    NP W  P SI  + 
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASIRSE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +          G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIELPAVVPSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|104781033|ref|YP_607531.1| hypothetical protein PSEEN1888 [Pseudomonas entomophila L48]
 gi|95110020|emb|CAK14725.1| conserved hypothetical protein; ErfK/YbiS/YcfS/YnhG family
           [Pseudomonas entomophila L48]
          Length = 325

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGVVINLAEYRLYYYPKGQGVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 RAE-----------------------------------HAADGDILPAVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|258624238|ref|ZP_05719187.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258583389|gb|EEW08189.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 306

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+    NP W  P SI  + 
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASIRSE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +          G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIELPAVVPSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|258622172|ref|ZP_05717198.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262173168|ref|ZP_06040845.1| hypothetical protein VII_000255 [Vibrio mimicus MB-451]
 gi|258585496|gb|EEW10219.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261890526|gb|EEY36513.1| hypothetical protein VII_000255 [Vibrio mimicus MB-451]
          Length = 306

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L      +  +    V +GR+ R TP++ + I+    NP W  P SI  + 
Sbjct: 95  IVINLAELRLYYFRPDEGKVHIFPVGIGRIGRDTPVMQTSISGKRKNPTWTPPASIRSE- 153

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +          G  N +    + 
Sbjct: 154 ----------------------------------YKAKGIELPAVVPSGPENPLGDYAMR 179

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL +      +  I +   
Sbjct: 180 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLYQQVERGEKVRIID--- 231

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 232 --EPIKIALEPDRSVFI 246


>gi|313499594|gb|ADR60960.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida BIRD-1]
          Length = 325

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 156 RKE-----------------------------------HAEDGDILPTVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|148548657|ref|YP_001268759.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida F1]
 gi|148512715|gb|ABQ79575.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida F1]
          Length = 325

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTKITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 156 RKE-----------------------------------HAEDGDILPTVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKMVPVGTP 229


>gi|26989044|ref|NP_744469.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida KT2440]
 gi|24983869|gb|AAN67933.1|AE016425_10 conserved hypothetical protein [Pseudomonas putida KT2440]
          Length = 325

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    +     G+ V     + +GR    +PI ++RI     NP W  P SI
Sbjct: 96  PREGIVINLAEYRMYYFPKGESVVYTFPLGIGREGWGSPIANTRITAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 156 RKE-----------------------------------HAEDGDILPTVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|260776994|ref|ZP_05885888.1| hypothetical protein VIC_002384 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606660|gb|EEX32934.1| hypothetical protein VIC_002384 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 274

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 47/203 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           ++    +++N+    L   +  K  +    V +GR+ R TP + + I++   NP W  P 
Sbjct: 58  QVPREGIVINLAELRLYYFQPEKNLVHIFPVGIGRIGRDTPEMVTSISQKRPNPTWTPPA 117

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI ++           YL+                                   G  N +
Sbjct: 118 SIRKE-----------YLEK------------------------GIELPRVVPAGPENPL 142

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T +   F   +R  +SGC+R+ N  D+  WL    P      
Sbjct: 143 GEYAMRLAYGVGDYLIHGTNKD--FGIGLR-VSSGCIRM-NPKDI-DWLF---PKVKLGE 194

Query: 368 IEEVVKTRKTTPVKLATEVPVHF 390
              V+   +   + L  +  V  
Sbjct: 195 KVRVIN--EPVKIALEPDRSVFL 215


>gi|110635323|ref|YP_675531.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110286307|gb|ABG64366.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 490

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 67/305 (21%), Gaps = 48/305 (15%)

Query: 104 LGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            G    S  V   +  L  +G       +       V  A+  +    G       D   
Sbjct: 206 PGARRASEDVAAYQILLDRAG--VSPGVIDGHIGDNVNKAIDAYYEVTGQRLK-TYDKEW 262

Query: 162 LEA-MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA--SLEAVENGKVGLRST 218
           +EA +         +  +            +   Y               E         
Sbjct: 263 IEAELQRTGGPAFTEYTITSEDAAGPFIASVPEDYSEKAQLERLSYTRVSEMLAERFHMD 322

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                        +     I         +S + + +    R+  +   +    +     
Sbjct: 323 EKFLIDLNPGANFNRPGTIIKVANPGQPAKSAVARIVADKSRKQVRLFDEGGRLIGVYPA 382

Query: 279 KE-------------VFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFY 316
                          V    ++ N    P   F+Q          PG    + S  I   
Sbjct: 383 TIGSSDTPSPTGIHQVERVALNPNYTYDPRKNFKQGNNDKVLTIPPGPNGPVGSVWIALS 442

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
                 +H TPEP          + GCVR+ N              W    + + VK   
Sbjct: 443 KP-TYGIHGTPEPSKIGKTY---SHGCVRLTN--------------WDAQELAKRVKPGV 484

Query: 377 TTPVK 381
           T    
Sbjct: 485 TVEFT 489


>gi|255020594|ref|ZP_05292657.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254969979|gb|EET27478.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 306

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 44/177 (24%)

Query: 190 KMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               + +++N+ A  L      +NGKV +   + +GR   +TP+  +++   + +P W  
Sbjct: 91  DAPRQGIVINLAAMRLFYYPEGKNGKVVVSYPLGIGREGWRTPLGKTQVTGKVKDPTWTP 150

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   ++ +          G  N
Sbjct: 151 PASIRAE-----------------------------------HAEKGEILPDVVPAGPQN 175

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    +         +H T +P      +R  + GC+R+   +I  L   +   TP
Sbjct: 176 PLGQYALRLGWP-GYLIHGTDKPW--GVGMR-VSHGCIRLYPEDIAKLFAAVPAGTP 228


>gi|224826667|ref|ZP_03699768.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224601268|gb|EEG07450.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 305

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 64/225 (28%), Gaps = 67/225 (29%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +V++N+P   L    +G +     V VG++  QTP     +  I   P W +P+SI ++ 
Sbjct: 43  HVVINLPQTRLFVYRDGTLLKSYPVAVGKMLTQTPTGTYAVTGIYPKPIWYVPKSIQEE- 101

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                +    +    PG  N + +  + 
Sbjct: 102 ----------------------------------MKQQGKPVLTSVPPGPDNPLGNAFVR 127

Query: 315 FYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
           F        MH T  P        F + GCVR++N                   +   V 
Sbjct: 128 FGDPRLGLGMHGTNVPTSV---PGFRSHGCVRLKN--------------EDIDELASTVS 170

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKD--SIIQF--RDDIYGLDN 414
                 V           Y +    +D    +      + Y  D+
Sbjct: 171 PGAAVTVA----------YQTVLLNEDAAGELWLTALKNPYKYDD 205


>gi|308049519|ref|YP_003913085.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
 gi|307631709|gb|ADN76011.1| ErfK/YbiS/YcfS/YnhG family protein [Ferrimonas balearica DSM 9799]
          Length = 308

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 94/289 (32%), Gaps = 51/289 (17%)

Query: 110 SVQRLRERLIISGD------LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            V+ L   LI  G              S      +E  V   Q    +     +    + 
Sbjct: 11  RVRVLISLLIFLGFSAQAAIYSAPPQGSRLLGFPMEHRVAEGQSLDHVAQQYDMGLLAMM 70

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVG 222
           A N  VD  +      L    ++L   +  R V++N+    L   +N +       + +G
Sbjct: 71  AANPGVDPFLPPTGSTLTLPSQMLLPDVERRGVVINLAELRLYYFDNARGRVYVYPIGIG 130

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           RV R+TP++ ++I++ + +P W  P +  +K+                            
Sbjct: 131 RVGRETPLVKTKISQRIKDPTWT-PTANTRKE---------------------------- 161

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
                W              G  N M    +     N  Y +H T     F   +R  ++
Sbjct: 162 -----WLEERGIELPRVVPAGPDNPMGHRALRLSYGNGEYLIHGTNHE--FGIGMR-VSA 213

Query: 342 GCVRVR--NIIDLDVWLLKDTPTWSRYHIEEVVK-TRKTTPVKLATEVP 387
           GC+R+R  +I +L   +           I E +K + +   + L    P
Sbjct: 214 GCIRMRPNDIEELFELVR---VGEPVRIINEPIKISGEPNGLYLEVHEP 259


>gi|325274314|ref|ZP_08140422.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas sp. TJI-51]
 gi|324100552|gb|EGB98290.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas sp. TJI-51]
          Length = 325

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 55/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGVVINLAEYRLYYYPKGQNVVYTFPLGIGREGWGSPIANTKIIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            ++                                   ++ +          G  N +  
Sbjct: 156 RKE-----------------------------------HAADGDILPAVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 FKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMLNNNVLELSKLVPVGTP 229


>gi|77164236|ref|YP_342761.1| hypothetical protein Noc_0717 [Nitrosococcus oceani ATCC 19707]
 gi|254436252|ref|ZP_05049759.1| ErfK/YbiS/YcfS/YnhG family [Nitrosococcus oceani AFC27]
 gi|76882550|gb|ABA57231.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207089363|gb|EDZ66635.1| ErfK/YbiS/YcfS/YnhG family [Nitrosococcus oceani AFC27]
          Length = 332

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 52/177 (29%), Gaps = 46/177 (25%)

Query: 192 GLRYVLVNIPAASLEAVENG-----KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             + V++N+    L              +   + +GR    TP+  + +     NP WV 
Sbjct: 102 PRKGVVINLAEMRLYYFPESPTAQPSTVVTHPIGIGREGWSTPLGRTSVISKKKNPTWVP 161

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI  +                                   ++ +         PG  N
Sbjct: 162 PESIRAE-----------------------------------HAADGDPLPKIVPPGPDN 186

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    +         +H T  P      +R  + GC+R+   +I+ L   +   TP
Sbjct: 187 PLGKFAMRLGMP-GYLIHGTNRPW--GVGMR-VSHGCIRLYPEDILSLFNQVKVGTP 239


>gi|170720947|ref|YP_001748635.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
 gi|169758950|gb|ACA72266.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
          Length = 325

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 54/173 (31%), Gaps = 42/173 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    +     G+ V     + +GR    +PI +++I     NP W  P SI
Sbjct: 96  PREGVVINLAEYRMYYFPKGQSVVYTFPLGIGREGWGSPIANTKIIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 RAE-----------------------------------HAADGDILPTVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            K          +H + +   F   +R  + GC R+   N+++L   +   TP
Sbjct: 181 YKFTLGVP-GYLIHGSNKK--FGIGMRT-SHGCFRMFNNNVLELSKMVPVGTP 229


>gi|54302422|ref|YP_132415.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9]
 gi|46915844|emb|CAG22615.1| hypothetical protein PBPRB0743 [Photobacterium profundum SS9]
          Length = 301

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 65/182 (35%), Gaps = 42/182 (23%)

Query: 190 KMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  + +++N+    L     ++  +     + +GRV R TP + +++++ + NP W   
Sbjct: 88  NVKRKGIIINLAELRLYYFPEDDKSIVYIFPIGIGRVGRATPNMITKVSQKIENPTWTPT 147

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            +I ++           Y +  +I +                             G  N 
Sbjct: 148 ANIRKE-----------YREKKDIEL-----------------------PAVVPAGPENP 173

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           +    +        Y +H T +   F   +R  +SGC+R+ N  D+  WL    P  +  
Sbjct: 174 LGEYAMRLAYSRGEYLIHGTNKD--FGIGMR-VSSGCIRM-NPWDI-EWLFPQVPRGTSV 228

Query: 367 HI 368
            I
Sbjct: 229 QI 230


>gi|260774029|ref|ZP_05882944.1| hypothetical protein VIB_002508 [Vibrio metschnikovii CIP 69.14]
 gi|260610990|gb|EEX36194.1| hypothetical protein VIB_002508 [Vibrio metschnikovii CIP 69.14]
          Length = 306

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 68/197 (34%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L         +    V +GR+ R TP + ++I+++  NP W  P+S+  + 
Sbjct: 96  IVVNLAELRLYYFPPNTQQVHIFPVGIGRIGRDTPEMTTQISQMRRNPTWTPPQSVRNE- 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                     YL+                                   G  N M +  + 
Sbjct: 155 ----------YLQR------------------------GIELPAVVPAGPDNPMGNYAMR 180

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
               +  Y +H T +   F   +R  ++GC+R+ +  D+  WL        +  I +   
Sbjct: 181 LAYGSGEYLIHGTNKD--FGIGMR-VSAGCIRM-DPKDI-EWLFHQVDRGVKVRIID--- 232

Query: 374 TRKTTPVKLATEVPVHF 390
             +   V L  +  V+ 
Sbjct: 233 --EPIKVTLEPDRSVYL 247


>gi|148556704|ref|YP_001264286.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingomonas wittichii RW1]
 gi|148501894|gb|ABQ70148.1| ErfK/YbiS/YcfS/YnhG family protein [Sphingomonas wittichii RW1]
          Length = 328

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 82/305 (26%), Gaps = 58/305 (19%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V   +  L   G       +  A    +  A++ +Q   GL  +G +D +T+ +   
Sbjct: 26  DPRVMGAQVLLDRLGF--GPGVIDGASGMSLTKALRGWQQAKGLPVTGRLDDATVGSFE- 82

Query: 168 PVDLRIRQLQVNLMR--IKKLLEQKMGLRYVLVNIPA--ASLEAVENGKVGLRSTVIVGR 223
           P       + V L    ++      +  R       A     +A+E       +T     
Sbjct: 83  PYRAMPTMIGVTLTPDILEGPFVGPIPARESEQAKMASLGYSDAMEKLAERYHTTPATLV 142

Query: 224 VDR-QTPILHSRINRIMFN---PYWVIPRSI-------------------IQKDMMALLR 260
               Q   L   +   + N   P    P  +                   + K ++    
Sbjct: 143 ALNAQQTKLAPGVVIKVPNVIPPASNFPADLNPAWRKTLWTLNVGSDQPEVAKVVVDKSD 202

Query: 261 QDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNF-------------------IF 298
              +        +       G       +     +  ++                     
Sbjct: 203 GVLRAFDGAGKLVAQFPATTGSRHDPLPIGQWKIQGRSYNPPFHYNPKLFWDAGSKDRKA 262

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID--LDVWL 356
              PG    +    I+   ++   +H TP P       R E+ GC+R+ N     L + +
Sbjct: 263 LLPPGPNGPVGVVWIDLDKQH-YGIHGTPNPEKIG---RTESHGCIRLTNWDAARLAMMV 318

Query: 357 LKDTP 361
              TP
Sbjct: 319 KPGTP 323


>gi|189423824|ref|YP_001951001.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ]
 gi|189420083|gb|ACD94481.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter lovleyi SZ]
          Length = 448

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 77/268 (28%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD------RQ 227
           + L+ N  R   +   +     +++NIP   L   + G +   + V +G          +
Sbjct: 206 QLLRYNNQR--IIPPHRTRD-GIVINIPDRMLYLFQQGSMAFSTAVALGTPTKTDQFVWE 262

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP+   +I     +P W +P SI ++  +                    +GKEV      
Sbjct: 263 TPVGKFKIVNKAKDPTWTVPPSIQEEMRL--------------------EGKEVITS--- 299

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV- 346
                         PGK N +    ++        +H T +P        + + GC+RV 
Sbjct: 300 ------------IPPGKDNPLGKYAMKTSLP-GILIHSTTKPWSI---YTYASHGCIRVY 343

Query: 347 -RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
              + +L   +  +T     Y                    PV          +D  +  
Sbjct: 344 PERMEELFKLVKPNTAGEIIYK-------------------PVKLA-----VTEDGRVLL 379

Query: 406 --RDDIYGL-DNVHVGIIPLPEDHPIDS 430
               DIY     +      L     +DS
Sbjct: 380 EAHVDIYKKTKGLAAEAQALIRAQKLDS 407


>gi|27367891|ref|NP_763418.1| hypothetical protein VV2_1544 [Vibrio vulnificus CMCP6]
 gi|320158161|ref|YP_004190539.1| hypothetical protein VVM_00694 [Vibrio vulnificus MO6-24/O]
 gi|27359464|gb|AAO08408.1| hypothetical protein VV2_1544 [Vibrio vulnificus CMCP6]
 gi|319933473|gb|ADV88336.1| hypothetical protein VVMO6_03314 [Vibrio vulnificus MO6-24/O]
          Length = 305

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 63/208 (30%), Gaps = 50/208 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+    L   E          V +GRV R TP + + I     NP W  P 
Sbjct: 92  PVEYQGIVINLAELRLYYFEPELGKVHVFPVGIGRVGRDTPEMVTSIREKRPNPTWTPPA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI ++                                      +          G  N +
Sbjct: 152 SIRKE-----------------------------------YREKGIELPKIVPAGPDNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     +  Y +H T +   F   +R  ++GC+R+    D+  WL        R  
Sbjct: 177 GEYALRLAYGSGDYLIHGTNKD--FGIGLR-VSAGCIRME-PKDI-EWLFSQVDKGQRVK 231

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISA 395
           I       +   V L    P   VY+ A
Sbjct: 232 IIN-----QPVKVSLE---PGRIVYLEA 251


>gi|261822001|ref|YP_003260107.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
 gi|261606014|gb|ACX88500.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 340

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 46/243 (18%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        ++VN+    L     
Sbjct: 54  IAADFKIGLLGMLEANPGADPYLPTAGSTLTIPTQMLLPDTPREGIVVNLAELRLYYYPK 113

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G++ R TP++ + ++    NP W    +I +            YL++ 
Sbjct: 114 GKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTWTPTANIRKH-----------YLEEQ 162

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
            I                               G  N M    +   +    Y +H T  
Sbjct: 163 GI-----------------------KLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNA 199

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-EEVVKTRKT----TPVKLA 383
              F   +R  +SGC+R+R   D+   L  + P  +R  I  + +KT         V++ 
Sbjct: 200 D--FGIGMR-VSSGCIRLR-PDDI-KALFDNVPVGTRVQILNDAIKTSVEPDGKRYVEVH 254

Query: 384 TEV 386
             +
Sbjct: 255 QPL 257


>gi|37676018|ref|NP_936414.1| hypothetical protein VVA0358 [Vibrio vulnificus YJ016]
 gi|37200558|dbj|BAC96384.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 305

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 63/208 (30%), Gaps = 50/208 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+    L   E          V +GRV R TP + + I     NP W  P 
Sbjct: 92  PVEYQGIVINLAELRLYYFEPELGKVHVFPVGIGRVGRDTPEMVTSIREKRPNPTWTPPA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI ++                                      +          G  N +
Sbjct: 152 SIRKE-----------------------------------YREKGIELPKIIPAGPDNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     +  Y +H T +   F   +R  ++GC+R+    D+  WL        R  
Sbjct: 177 GEYALRLAYGSGDYLIHGTNKD--FGIGLR-VSAGCIRME-PKDI-EWLFSQVDKGQRVK 231

Query: 368 IEEVVKTRKTTPVKLATEVPVHFVYISA 395
           I       +   V L    P   VY+ A
Sbjct: 232 IIN-----QPVKVSLE---PGRIVYLEA 251


>gi|227111739|ref|ZP_03825395.1| hypothetical protein PcarbP_02182 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 340

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 80/243 (32%), Gaps = 46/243 (18%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N  VD  +      L    ++L        ++VN+    L     
Sbjct: 54  IAADFKIGLLGMMEANPGVDPYLPTAGSTLTVPTQMLLPDTPREGIVVNLAELRLYYYPK 113

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G++ R TP++ + I+    NP W    +I +            YL++ 
Sbjct: 114 GKNTVIVYPIGIGQLGRNTPLMTTSISEKRENPTWTPTANIRKH-----------YLEEQ 162

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
            I                               G  N M    +   +    Y +H T  
Sbjct: 163 GI-----------------------KLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNA 199

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-EEVVKTRKT----TPVKLA 383
              F   +R  +SGC+R+R   D+   L  + P  +R  I  + +KT         V++ 
Sbjct: 200 D--FGIGMR-VSSGCIRLR-PDDI-KALFDNVPVGTRVQIVNDAIKTSVEPDGKRYVEVH 254

Query: 384 TEV 386
             +
Sbjct: 255 QPL 257


>gi|253701884|ref|YP_003023073.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
 gi|251776734|gb|ACT19315.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
          Length = 307

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 51/173 (29%), Gaps = 46/173 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++        ++VN+P   L     GK        + +G    +TP+    + + M NP
Sbjct: 100 WIVPHVKNDPDIVVNLPEYRLYLFSQGKPGGVFTFPLGIGDEGAETPLGSYTVIQKMTNP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI  +                                        P       P
Sbjct: 160 SWHVPDSIRHE---------------------------------------VPELPQIVPP 180

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           G  N + +  +    R N  +H T  P       R  + GC+R+    D+   
Sbjct: 181 GPSNPLGTHALRLS-RGNILIHGTNRPWGIG---RRSSHGCLRLY-PEDITTL 228


>gi|50120795|ref|YP_049962.1| hypothetical protein ECA1865 [Pectobacterium atrosepticum SCRI1043]
 gi|49611321|emb|CAG74768.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 340

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 46/243 (18%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        ++VN+    L     
Sbjct: 54  IAADFKIGLLGMLEANPGADPYLPTPGSTLTIPTQMLLPDTPREGIVVNLAELRLYYYPK 113

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G++ R TP++ + ++    NP W    +I +            YL++ 
Sbjct: 114 GKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTWTPTANIRKH-----------YLEEQ 162

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
            I                               G  N M    +   +    Y +H T  
Sbjct: 163 GI-----------------------KLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNA 199

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-EEVVKTRKT----TPVKLA 383
              F   +R  +SGC+R+R   D+   L  + P  +R  I  + +KT         V++ 
Sbjct: 200 D--FGIGMR-VSSGCIRLR-PDDI-KALFDNVPVGTRVQILNDAIKTSVEPDGKRYVEVH 254

Query: 384 TEV 386
             +
Sbjct: 255 QPL 257


>gi|229589220|ref|YP_002871339.1| hypothetical protein PFLU1701 [Pseudomonas fluorescens SBW25]
 gi|229361086|emb|CAY47949.1| conserved hypothetical exported protein [Pseudomonas fluorescens
           SBW25]
          Length = 321

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 42/172 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI H+ I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRLYYFPKGQNVVYTFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++            G  N +  
Sbjct: 156 KAE-----------------------------------HAANGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            K    +     +H +     F    R  + GC R+   N++++   +   T
Sbjct: 181 FKFTLGTP-GYLIHGSNMK--FGIGTRT-SHGCFRMFNNNVLEMAGMVPVGT 228


>gi|70731627|ref|YP_261368.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5]
 gi|68345926|gb|AAY93532.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas fluorescens Pf-5]
          Length = 330

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 42/172 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI H+ I     NP W  P SI
Sbjct: 102 PREGIVINLAEYRLYYYPKGRNVVYTFPLGIGREGWGSPIAHTSITAKTPNPTWTPPASI 161

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 162 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 186

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            K    +     +H + +   F   +R  + GC R+   N++++   +   T
Sbjct: 187 FKFTLGTP-GYLIHGSNKK--FGIGMRT-SHGCFRMLNNNVLEMAGMVPVGT 234


>gi|312959750|ref|ZP_07774266.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens WH6]
 gi|311285916|gb|EFQ64481.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas fluorescens WH6]
          Length = 321

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 42/172 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI H+ I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRLYYFPKGQNVVYTFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++            G  N +  
Sbjct: 156 KAE-----------------------------------HAANGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            K    +     +H +     F    R  + GC R+   N++++   +   T
Sbjct: 181 FKFTLGTP-GYLIHGSNMK--FGIGTRT-SHGCFRMFNNNVLEMAGMVPVGT 228


>gi|225163557|ref|ZP_03725867.1| ErfK/YbiS/YcfS/YnhG family protein [Opitutaceae bacterium TAV2]
 gi|224801823|gb|EEG20109.1| ErfK/YbiS/YcfS/YnhG family protein [Opitutaceae bacterium TAV2]
          Length = 356

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 79/286 (27%), Gaps = 57/286 (19%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPV 169
             L  R     DL  S  +         +A+  FQ   GL  +G +D +T   +  + P 
Sbjct: 67  IALARR-----DLS-SGPIDGRPGPQTRAALSAFQRDQGLPVTGALDDATRARLILDTPP 120

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR--STVIVGRVDRQ 227
                    +L  ++ L    +G            LE V             +  R+D +
Sbjct: 121 LTSRLITAADLASLQPLSPTWLGKSAQTTLAYQTPLELVAEQTRAHPDWLRQVNPRIDWR 180

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMA--------LLRQDPQYLKDNNIHMIDEKGK 279
                +R+  ++ +P  + P                     +   +L    +   D  G+
Sbjct: 181 RVAPGTRV--LVPDPERIFPALAPGGASTPATPVPKRRKAARVRIHLASRTLQATDADGR 238

Query: 280 -----------EVFVEEVDW-----------NSPEPPNFI-----------FRQDPGKIN 306
                       V    V              + +P  F                PG  N
Sbjct: 239 LLAHFPVSIARRVDKRPVGELHVTVVVPNPDYTFDPAVFPESAEARELGRKLILPPGPNN 298

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +    I         +H TP+P       R E+ GC R+ N   L
Sbjct: 299 PVGLVWIGLDRP-GYGLHGTPDPQHVG---RTESHGCFRLANWDAL 340


>gi|227329828|ref|ZP_03833852.1| hypothetical protein PcarcW_21820 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 340

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 46/204 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     GK   +   + +G++ R TP++ + ++    NP W    
Sbjct: 93  DTPREGIVVNLAELRLYYYPKGKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTWTPTA 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +            YL++  I                               G  N M
Sbjct: 153 NIRKH-----------YLEEQGI-----------------------KLPAVVPAGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L  + P  +R  
Sbjct: 179 GLHALRLSAHGGVYLLHGTNAD--FGIGMR-VSSGCIRLR-PDDI-KALFDNVPVGTRVQ 233

Query: 368 I-EEVVKTRKT----TPVKLATEV 386
           I  + +KT         V++   +
Sbjct: 234 IVNDAIKTSVEPDGKRYVEVHQPL 257


>gi|94496487|ref|ZP_01303064.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
 gi|94424233|gb|EAT09257.1| ErfK/YbiS/YcfS/YnhG [Sphingomonas sp. SKA58]
          Length = 347

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 76/308 (24%), Gaps = 73/308 (23%)

Query: 118 LIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST---LEAMNVPVDLR 172
           L   G           +++    ++A++ FQ  H L  +G+ D  T   L          
Sbjct: 56  LDRWGFSPGVLDGKDGMSY----KAALRGFQEAHDLPVTGLFDQPTSNMLLEGEARPTTY 111

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + ++  +  R         GL              +E       +T              
Sbjct: 112 LVKIPEDFARGP-FFNIPRGLNEQASLPALTYRNLMEKLAERFHTTPDALVALNSPTTQV 170

Query: 233 SRINRIMFNPYWVIPRSIIQKD-----------------------MMALLRQDPQYLKDN 269
                I        P + I+ D                       ++       +    +
Sbjct: 171 GAGATIRVPAIDNQPVAQIEGDERGWGETLASLGVAKEQPQADHIVVDKSEGLLKAYDAD 230

Query: 270 NIHMID---EKGKEVFVEEVD-------------------WNSPEPPNFIFRQDPGKINA 307
           N  +       G +     +                    +      +      PG    
Sbjct: 231 NRMIAQFPVTTGSQHDPLPIGEWTIKGVSRNPEFHYNPDLFWDASSKDEKAVLKPGPNGP 290

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +    I+    +   +H TPEP       R E+ GC+R+ N              W    
Sbjct: 291 VGVVWIDLSKDH-YGIHGTPEPQTIG---RTESHGCIRLTN--------------WDAAR 332

Query: 368 IEEVVKTR 375
           + ++VKT 
Sbjct: 333 LAQMVKTG 340


>gi|253688821|ref|YP_003018011.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755399|gb|ACT13475.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 340

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 46/243 (18%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N  VD  + +    L    ++L        ++VN+    L     
Sbjct: 54  IAADFKIGLLGMMEANPGVDPYLPKAGSTLTIPTQMLLPDTPREGIVVNLAELRLYYYPK 113

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G++ R TP++ + ++    NP W    +I +            YL++ 
Sbjct: 114 GKNTVIVYPIGIGQLGRNTPLMTTSVSEKRENPTWTPTANIRKH-----------YLEEQ 162

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
            I                               G  N M    +   +    Y +H T  
Sbjct: 163 GI-----------------------KLPAVVPAGPDNPMGLHALRLSAHGGVYLLHGTNA 199

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI-EEVVKTRKT----TPVKLA 383
              F   +R  +SGC+R+R   D+   L  + P  +R  I  + +KT         V++ 
Sbjct: 200 D--FGIGMR-VSSGCIRLR-PDDI-KALFDNVPVGTRVQILNDAIKTSVEPDGKRYVEVH 254

Query: 384 TEV 386
             +
Sbjct: 255 QPL 257


>gi|149181183|ref|ZP_01859682.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
 gi|148851082|gb|EDL65233.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus sp. SG-1]
          Length = 347

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 13/161 (8%)

Query: 2   VGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDM 61
           + + +       +  YLI   G++  E  +  S LD     S  +   +  + +    + 
Sbjct: 107 INFTQAYDRYVWYHAYLIDKYGVNPREDIVAHSTLD----PSRRTDPQNALNRYGISWEE 162

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIIS 121
            ++         T    E+         +RGG   LP   L  G+    V+ ++ +L+ +
Sbjct: 163 FLEDVNNAY--RTYFTNEET----SQPAARGGSLSLP---LGEGDQGALVREIQTKLVKA 213

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G   P  G    F    E AV  FQ ++GL   G+V   TL
Sbjct: 214 GFSLPRYGADGIFGQETEMAVMRFQRKYGLRVDGLVGMQTL 254



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPS 154
            LP   L  G+    V++L+  L           +   F      A++ FQ  +  L   
Sbjct: 271 PLPGGILQEGDEGNGVRQLQRALKQINF--DPGEIDGIFGPKTMDAIRRFQETYAELKND 328

Query: 155 GMVDSSTLEAMNVPVDL 171
           G+   +T + + + ++ 
Sbjct: 329 GIYGPNTRKYILMELEE 345


>gi|171909851|ref|ZP_02925321.1| ErfK/YbiS/YcfS/YnhG family protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 322

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 71/298 (23%), Gaps = 50/298 (16%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +   P         V +L+  L   G L     +      +   A+  +   HGL   
Sbjct: 22  PRVATAPRPEDMVQDDVVKLQIHL--DGQLFGPGIVDGREGEFTRKALARYNTSHGLPGD 79

Query: 155 -----GMVDSST--------LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
                G ++  T        L  + V        +         L E      +      
Sbjct: 80  AFPDLGSIEPYTTYTVTADDLSKIGVQGGSPSVVVLQKTQPYTSLTELLAERFHTSK--- 136

Query: 202 AASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR---SIIQKDMMA 257
           A               +   V   +   P+  + I           P      I  D+  
Sbjct: 137 AFVARLNPGVNVDAAPAGASVTVPNVARPLFVTEIPATSKTSRVQDPALANRFIVVDLRV 196

Query: 258 LLRQDPQYLKDNNIHMID--------------EKGKEVFVEEVDWNSPEPPNFI------ 297
            + +   Y  +    +                   K V +    W   +           
Sbjct: 197 KMLEV--YDAEGGPLIAAFPITPGSSEHPAPQGDWKIVGITTFPWYRWDEGVLKRGERTE 254

Query: 298 --FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
             +   PG  + +    +   +R    +H T  P       R  + GC+R+ N     
Sbjct: 255 DFYNLPPGPNSPVGIVWMGL-NRPGVGIHGTSTPETIG---RSGSHGCIRLSNWDAAA 308


>gi|330808350|ref|YP_004352812.1| hypothetical protein PSEBR_a1605 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376458|gb|AEA67808.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 323

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 42/172 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     G+ V     + +GR    +PI H+ I     NP W  P SI
Sbjct: 96  PREGIVINLAEYRLYYFPKGRNVVYTFPLGIGREGWGSPIAHTSIIAKTPNPTWTPPASI 155

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                   ++ +          G  N +  
Sbjct: 156 KAE-----------------------------------HAADGDPLPNVVPAGPDNPLGP 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            K    +     +H + +   F   +R  + GC R+   N++++   +   T
Sbjct: 181 FKFTLGTP-GYLIHGSNKK--FGIGMRT-SHGCFRMFNNNVLEMAGMVPVGT 228


>gi|225024391|ref|ZP_03713583.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
 gi|224942888|gb|EEG24097.1| hypothetical protein EIKCOROL_01266 [Eikenella corrodens ATCC
           23834]
          Length = 310

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 70/239 (29%), Gaps = 71/239 (29%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L   ENG++     V VG+   +TP+ +  I    +NP W IP SI ++
Sbjct: 33  QHVVINIPQMRLFLYENGQLKNVYPVAVGKNRTRTPLGNYHIGSKAYNPTWSIPASIRRE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +      I    PG  N +    +
Sbjct: 93  R-----------------------------------AAAGLPEISSIPPGPSNPLGPVFV 117

Query: 314 EFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYHIEE 370
                     +H T  P          + GCVR+   N +                    
Sbjct: 118 RLGPPRLGLGIHGTNAPASV---PGIRSHGCVRMHSNNALQFA----------------R 158

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGIIPLPED 425
            V+T  +  V          +Y  A    D+          D Y   N++   +    D
Sbjct: 159 NVRTGASAAV----------IYQLASLNADTNNHLWLAAYADPYQQRNLNTTALRQSID 207


>gi|169831666|ref|YP_001717648.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638510|gb|ACA60016.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 307

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 85/257 (33%), Gaps = 79/257 (30%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V+ ++E+L  +G       ++  +     +AV+  Q  +G++PSG+VD+ T   +  
Sbjct: 48  GNDVREVQEQLRAAGLF--QGPVNGVYGPITAAAVRSLQEANGIEPSGVVDAETWYLLA- 104

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                   L    ++  + L    G   +++++   +L  +ENG    +    VG+ +  
Sbjct: 105 --------LMSTPVKTSEPLPPPTGEVEIIIDVQKRTLTVMENGYPYKQFPCAVGKNETP 156

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP+ +  I R   N  W                                 G       +D
Sbjct: 157 TPVGNWSIRRKARN--WG-----------------------------TGFGTRWLGLNID 185

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           W                                 Y +H T +P       R  + GC+R+
Sbjct: 186 W-------------------------------GIYGIHGTNKPYSIG--TRA-SHGCIRM 211

Query: 347 RN--IIDLDVWLLKDTP 361
            N  + +L  W+   TP
Sbjct: 212 FNRHVEELFPWVEAGTP 228



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  ++  +   G  D    +   F + ++ AV  F+  H L     VD  
Sbjct: 243 TLVHGDRESGVLEIQRLMQKHGYYD--GPIDGIFGSGLQKAVVQFRKDHNLRYDNRVDRE 300


>gi|78223666|ref|YP_385413.1| peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter
           metallireducens GS-15]
 gi|78194921|gb|ABB32688.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG [Geobacter
           metallireducens GS-15]
          Length = 293

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 70/209 (33%), Gaps = 51/209 (24%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV- 224
            +     +R  QV  +  ++++ +++    +++NIP  +L    NG+V    +V VG+  
Sbjct: 57  RIDPQKPLRAGQVLRVDTRRIVPRQI-DDGIVINIPDRTLYYFRNGEVDRVLSVAVGKPK 115

Query: 225 --------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
                   D  TP  + RI   + +P W +P SI ++                       
Sbjct: 116 PVNDPEKRDWHTPTGNFRIIGKVKDPTWRVPPSIRKE----------------------- 152

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                                    PGK N +    ++        +H T  P       
Sbjct: 153 ------------MKERGKEVKTIVPPGKKNPLGKYALKTSIP-GILIHSTNAPESV---Y 196

Query: 337 RFETSGCVRV--RNIIDLDVWLLKDTPTW 363
            F + GC+RV    + D    + ++T   
Sbjct: 197 SFSSHGCIRVFPEFMEDFFNSVTEETTGE 225


>gi|317492238|ref|ZP_07950667.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919577|gb|EFV40907.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 333

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++ R TP + + +++ + NP W    
Sbjct: 94  DAPREGIVINLAEMRLFYYPKGEGKVVVYPIGIGQLGRNTPEMVTSVSQSIANPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       E          G  N M
Sbjct: 154 NIRKH-----------------------------------YKAEGVTLPAVVPAGPENPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   ++   Y +H T     F   +R  +SGC+R+R   D+   L K  P  +R  
Sbjct: 179 GLFALRLSAQGGVYLIHGTNA--NFGIGMR-VSSGCIRLR-PDDI-EALFKTVPKGTRVQ 233

Query: 368 IEEV 371
           I   
Sbjct: 234 IVNA 237


>gi|21109718|gb|AAM38210.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 215

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 46/203 (22%), Gaps = 28/203 (13%)

Query: 175 QLQVNLMRIKKLL-EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           Q  +    +         G                E       +   + R       L  
Sbjct: 2   QYTLTDADVAGPFQPIPKGPAEQAKLTALGYASVDEALGERFHADPALLRQLNPGVDLSK 61

Query: 234 RINRI-MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVD-- 287
             + I + N   V P +   K ++       +    +           G +     +   
Sbjct: 62  AGSVIEVPNIDGVPPLAKPAKLVVDKSDSTLRLFDADGKVYAQFPVSSGSKHDPLPIGRW 121

Query: 288 -----------------WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
                            +   +          G  N +    I+    +   +H TPEP 
Sbjct: 122 KILGISRDPVFKYNPKLFWDAKKGEQKATLPAGPNNPVGRVWIDLSKPH-YGLHGTPEPG 180

Query: 331 LFNNVVRFETSGCVRVRNIIDLD 353
                    + GCVR+ N   + 
Sbjct: 181 HVGKTE---SHGCVRLTNWDVVA 200


>gi|308270996|emb|CBX27606.1| hypothetical protein N47_H24280 [uncultured Desulfobacterium sp.]
          Length = 322

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 58/194 (29%), Gaps = 52/194 (26%)

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV--ENGKVGLRSTVIVGRV 224
           VP + R+  +       + +L        +++N+    L     ++ K  +   V +G  
Sbjct: 97  VPEENRLIVIPT-----EWILPDIGIRHGIVINVAEMRLYYFPDDDTKSVITYPVGIGDE 151

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
            + TP+    +   + NP W +P+SI                                  
Sbjct: 152 GKDTPLGIFSVIEKIKNPAWYVPKSI---------------------------------- 177

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                  E P       PG  N M S  +         +H T  P          + GC+
Sbjct: 178 -----QLEKPELPAVVPPGPDNPMGSRALRLSI-WTVLIHGTNRPWGIGTRN---SHGCI 228

Query: 345 RV--RNIIDLDVWL 356
           R+   +I  L   +
Sbjct: 229 RMYEEDIQKLFEQI 242


>gi|53804993|ref|YP_113349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str.
           Bath]
 gi|53758754|gb|AAU93045.1| ErfK/YbiS/YcfS/YnhG family protein [Methylococcus capsulatus str.
           Bath]
          Length = 361

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 65/212 (30%), Gaps = 47/212 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE---NGKVGL---RSTVIVGRVDRQTPILHSRINR 237
           ++ +        ++VNIP   L        G          + +GR+D ++P+  +++  
Sbjct: 86  RQFILPDAPRNGIVVNIPEMRLYFYPSAGKGAKPTKVVTYPISIGRMDWRSPLGLTKVVA 145

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
            + +P W  P SI  +                                   ++       
Sbjct: 146 KVKDPVWRPPASIKAE-----------------------------------HAKNGEILP 170

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
                G  N +    +         +H T +   +   +R  T GC+R+    D+     
Sbjct: 171 DVVPAGPNNPLGQFAMRLGVP-GYLIHGTDQDKSYGIGMR-VTHGCIRMY-PEDVAKLFP 227

Query: 358 KDTPTWSRYHIEEVVK---TRKTTPVKLATEV 386
           +         + + VK     +T  ++++  +
Sbjct: 228 EVAVGTPVNLVNQPVKLGWQGETLYIEVSESL 259


>gi|330860172|emb|CBX70493.1| hypothetical protein YEW_AT04120 [Yersinia enterocolitica W22703]
          Length = 85

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 346 VRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
           +    DL   LL+D   W+   +   +K   TT V +   VPV   Y++AW   D   QF
Sbjct: 1   MNKASDLANMLLQDA-GWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQF 59

Query: 406 RDDIYGLD 413
           R DIY  D
Sbjct: 60  RTDIYNYD 67


>gi|238765289|ref|ZP_04626217.1| hypothetical protein ykris0001_43380 [Yersinia kristensenii ATCC
           33638]
 gi|238696512|gb|EEP89301.1| hypothetical protein ykris0001_43380 [Yersinia kristensenii ATCC
           33638]
          Length = 355

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        +++N+    L     
Sbjct: 56  IAADYKIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           G+   +   + +G++ R TP + + +++ + NP W    +I +            YL + 
Sbjct: 116 GQNKVVVYPIGIGQLGRNTPTMTTSVSQKIPNPTWTPTANIRKN-----------YLAE- 163

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                                            G  N M    +   + +  Y +H T  
Sbjct: 164 -----------------------GITLPSVVPAGPENPMGLFAMRLSAGSGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L K  P  +R  I
Sbjct: 201 N--FGIGMR-VSSGCIRLR-PDDI-EALFKSVPKGTRVQI 235


>gi|123442427|ref|YP_001006406.1| hypothetical protein YE2166 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161649|ref|YP_004298226.1| hypothetical protein YE105_C2027 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122089388|emb|CAL12236.1| putative exported protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318605859|emb|CBY27357.1| L,D-transpeptidase YcfS [Yersinia enterocolitica subsp. palearctica
           Y11]
 gi|325665879|gb|ADZ42523.1| hypothetical protein YE105_C2027 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861432|emb|CBX71658.1| uncharacterized protein ycfS [Yersinia enterocolitica W22703]
          Length = 355

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 69/220 (31%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        +++N+    L     
Sbjct: 56  IAADYKIGLLGMLEANPDADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           G+   +   + +G++ R TP + + +++ + NP W    +I +                 
Sbjct: 116 GQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWTPTANIRKH---------------- 159

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                               + E          G  N M    +   +    Y +H T  
Sbjct: 160 -------------------YAAEGVTLPAVVPAGPENPMGLFAMRLAAGGGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L K  P  +R  I
Sbjct: 201 N--FGIGMR-VSSGCIRLR-PDDI-EALFKAVPKGTRVQI 235


>gi|295694715|ref|YP_003587953.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
 gi|295410317|gb|ADG04809.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
          Length = 276

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 62/245 (25%), Gaps = 84/245 (34%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  V  ++ RL + G L         +      AV  FQ   GL   G+V  +T  
Sbjct: 13  PYMRGPDVIAVQRRLTVFGRLSSW---DGIYGPVTARAVAEFQRASGLLSDGIVGPATWV 69

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A+ +              +++       G  ++ ++     L   +  ++     V VG+
Sbjct: 70  ALGI-------------EQVEW----GGGQFHIAIDTERRVLSLFQRDRLIRSFPVAVGK 112

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               TP+    I   + NP                    P       + + +        
Sbjct: 113 PTTPTPVGDWVIVEKIANPGG------------------PFGAAWMRLSVPNGGYGIH-- 152

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                              G  N                           +V R  + GC
Sbjct: 153 -------------------GTNNP-------------------------GSVGRAVSHGC 168

Query: 344 VRVRN 348
           VR+ N
Sbjct: 169 VRMHN 173



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 97  LPIRPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           L  R LH+G +    + +++  L + G           F    ++AV+ FQ    L   G
Sbjct: 196 LTTRLLHMGVTPGDDIAQVQRMLQVLGFY--RGDTDGIFGRITDTAVRAFQQSAQLTVDG 253

Query: 156 MVDSST 161
           +V   T
Sbjct: 254 IVGPRT 259


>gi|88811264|ref|ZP_01126520.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrococcus mobilis Nb-231]
 gi|88791803|gb|EAR22914.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrococcus mobilis Nb-231]
          Length = 353

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 65/221 (29%), Gaps = 71/221 (32%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVE-----NGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           +K +  +     +++NIP   L           +  +   V +GR D  TP+  + +   
Sbjct: 126 RKFILPRAPREGIVINIPELRLYYYPPAAKGKARQVITHPVGLGRQDWATPLGRASVVEK 185

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           +  P W  P SI  +                                   ++        
Sbjct: 186 IPQPTWYPPASIRAE-----------------------------------HAARGEKLPG 210

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
              PG  N +    +         +H T +P  +   +R  + GC+R+    D+  +   
Sbjct: 211 IVPPGPNNPLGEYVLLLSIP-GYLIHGTNKP--YGVGMR-VSHGCIRLY-PEDIARFFA- 264

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFV---YISAW 396
                                 +++ + PVH V   Y  AW
Sbjct: 265 ----------------------RVSRKTPVHIVDQPYKLAW 283


>gi|67921138|ref|ZP_00514657.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
 gi|67857255|gb|EAM52495.1| ErfK/YbiS/YcfS/YnhG [Crocosphaera watsonii WH 8501]
          Length = 191

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 62/219 (28%), Gaps = 58/219 (26%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR----YVLVNIPAASLE 206
           L   G+   +       P          + +    +       +    +V++N+    + 
Sbjct: 19  LPIEGINKQAIASEGTTPETPPTELPVTSPVEEAAIPTAPENNQTLATHVVLNLKERRVY 78

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             ++ +V     V +GR   +TP  +  + +++ +P W  P                   
Sbjct: 79  VYQDDQVIANYRVAIGRPGWETPKGNFSVIQMVEDPQWKNP------------------- 119

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM--H 324
                         V                    PG  + +    I F      Y+  H
Sbjct: 120 ----------WNGRVS------------------APGPNSPLGERWIGFSREGGKYIGFH 151

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            TP   +        + GCVR+RN  + +L   +    P
Sbjct: 152 GTPGEHVMGQ---AVSHGCVRMRNRDVKELYELVQNGIP 187


>gi|260425195|ref|ZP_05734487.2| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470]
 gi|260404459|gb|EEW98006.1| ErfK/YbiS/YcfS/YnhG family protein [Dialister invisus DSM 15470]
          Length = 351

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 62/240 (25%), Gaps = 84/240 (35%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            ++    + + +N+ +  L   E  +      V VG  +  +P+    I+    NP W  
Sbjct: 50  PKKSETGKKITLNLASRLLTLYEGTEKVRIYPVAVGAPETPSPVGEFSISEKEVNPVWTD 109

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P++                                                     G  N
Sbjct: 110 PKT-----------------------------------------------KTTVPSGPSN 122

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWS 364
            +    +  Y       H T  P       R  + GC+R+   ++ +L   +   T    
Sbjct: 123 PLGYRWLGLYGNYGI--HGTNAPWSIG---RSVSHGCIRMYEEDVEELFESVPMGT---- 173

Query: 365 RYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPK--DSIIQF--RDDIYGLDNVHVGII 420
                                 PV  +Y      +  D  + +    D YG + + V  +
Sbjct: 174 ----------------------PVEIIYDRVIMEEAPDHTVSYYIYPDGYGWEPLTVSSV 211


>gi|307823175|ref|ZP_07653405.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307735950|gb|EFO06797.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 470

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 59/212 (27%), Gaps = 68/212 (32%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG--LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               + + +N+    L      +        V +GR    TP+  + I     NP W +P
Sbjct: 147 DSPHKGIALNLANMRLFYYPKKQPDKVYTYPVGIGRQGWNTPMGQTSIVAKDANPSWNVP 206

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            SI ++                                   ++ +  +       G  N 
Sbjct: 207 ESIHRE-----------------------------------HAEKGDSLPKVVRSGPDNP 231

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +    +         +H T +P          + GCV++    D++V   K T       
Sbjct: 232 LGLYAMRLGFP-GYLIHGTNKPYGIGM---QISHGCVQLY-PEDIEVLFKKATVG----- 281

Query: 368 IEEVVKTRKTTPVKLATEVPVHFV---YISAW 396
                             +PV  +   Y++AW
Sbjct: 282 ------------------MPVRIIHQPYLTAW 295


>gi|108807738|ref|YP_651654.1| hypothetical protein YPA_1743 [Yersinia pestis Antiqua]
 gi|145598053|ref|YP_001162129.1| hypothetical protein YPDSF_0750 [Yersinia pestis Pestoides F]
 gi|162421439|ref|YP_001606997.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis Angola]
 gi|165927498|ref|ZP_02223330.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939524|ref|ZP_02228070.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011816|ref|ZP_02232714.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166210795|ref|ZP_02236830.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400728|ref|ZP_02306234.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167422171|ref|ZP_02313924.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167470494|ref|ZP_02335198.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis FV-1]
 gi|229837923|ref|ZP_04458082.1| hypothetical protein YPH_0148 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895083|ref|ZP_04510259.1| hypothetical protein YPS_2868 [Yersinia pestis Pestoides A]
 gi|229898484|ref|ZP_04513629.1| hypothetical protein YPF_2918 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|294503598|ref|YP_003567660.1| hypothetical protein YPZ3_1488 [Yersinia pestis Z176003]
 gi|108779651|gb|ABG13709.1| hypothetical protein YPA_1743 [Yersinia pestis Antiqua]
 gi|145209749|gb|ABP39156.1| hypothetical protein YPDSF_0750 [Yersinia pestis Pestoides F]
 gi|162354254|gb|ABX88202.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis Angola]
 gi|165912573|gb|EDR31204.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165920553|gb|EDR37830.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989281|gb|EDR41582.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166207975|gb|EDR52455.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166958983|gb|EDR56004.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049581|gb|EDR60989.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|229688032|gb|EEO80103.1| hypothetical protein YPF_2918 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229694289|gb|EEO84336.1| hypothetical protein YPH_0148 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701845|gb|EEO89868.1| hypothetical protein YPS_2868 [Yersinia pestis Pestoides A]
 gi|262361640|gb|ACY58361.1| hypothetical protein YPD4_1453 [Yersinia pestis D106004]
 gi|262365618|gb|ACY62175.1| hypothetical protein YPD8_1492 [Yersinia pestis D182038]
 gi|294354057|gb|ADE64398.1| hypothetical protein YPZ3_1488 [Yersinia pestis Z176003]
          Length = 339

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++ R TP + + I++ + NP W    
Sbjct: 95  DTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRDTPTMVTSISQKIPNPTWTPTA 154

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +            YL +                                  G  N M
Sbjct: 155 NIRKN-----------YLAE------------------------GITLPSVVPAGPDNPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 180 GQFALRLSAGRGEYLIHGTNAD--FGIGLR-VSSGCIRLR-PDDI-EALFNSVPKGTRVQ 234

Query: 368 I 368
           I
Sbjct: 235 I 235


>gi|94968756|ref|YP_590804.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
 gi|94550806|gb|ABF40730.1| ErfK/YbiS/YcfS/YnhG [Candidatus Koribacter versatilis Ellin345]
          Length = 205

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 64/227 (28%), Gaps = 67/227 (29%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
            + +Q    R    +E     R +LV+IP   L  +E+ KV     V VG+    +P   
Sbjct: 28  AQTVQATEAR---PMEAPRPTRLILVSIPDRKLALLEDDKVVKVYPVAVGKDSTPSPEGT 84

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
             I   + NP +                                +GK V           
Sbjct: 85  FTIKSHVTNPTYYH------------------------------EGKVV----------- 103

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII-- 350
                    PG  N + S  +    +    +H T  P          + GC+R+      
Sbjct: 104 --------APGPQNPLGSRWMGLSEK-GYGIHGTNAPKSIGK---AASHGCIRMAKKDLE 151

Query: 351 DLDVWLLKDTPTWSRYHIEEVV---------KTRKTTPVKLATEVPV 388
           +L   +        R   +E +          T  TT V      PV
Sbjct: 152 ELFTLVKVGDGVDIRGERDEQMAQVFGVEADATPATTVVAAIQNAPV 198


>gi|238782569|ref|ZP_04626600.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC
           43970]
 gi|238716496|gb|EEQ08477.1| hypothetical protein yberc0001_22190 [Yersinia bercovieri ATCC
           43970]
          Length = 355

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        +++N+    L     
Sbjct: 56  IAADYKIGLLGMLEANPDADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           G+   +   + +G++ R TP + + +++ + NP W  P + I+K  +             
Sbjct: 116 GQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PTANIRKHYL------------- 161

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                                 E          G  N M    +   +    Y +H T  
Sbjct: 162 ---------------------AEGVTLPAVVPAGPENPMGLFAMRLAAGGGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L K  P  +R  I
Sbjct: 201 N--FGIGMR-VSSGCIRLR-PDDI-EALFKSVPKGTRVQI 235


>gi|22125832|ref|NP_669255.1| hypothetical protein y1940 [Yersinia pestis KIM 10]
 gi|51596632|ref|YP_070823.1| hypothetical protein YPTB2308 [Yersinia pseudotuberculosis IP
           32953]
 gi|108812015|ref|YP_647782.1| hypothetical protein YPN_1853 [Yersinia pestis Nepal516]
 gi|153948284|ref|YP_001400722.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167424834|ref|ZP_02316587.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170024092|ref|YP_001720597.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186895688|ref|YP_001872800.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229902327|ref|ZP_04517447.1| hypothetical protein YP516_2061 [Yersinia pestis Nepal516]
 gi|270490494|ref|ZP_06207568.1| ErfK/YbiS/YcfS/YnhG [Yersinia pestis KIM D27]
 gi|21958762|gb|AAM85506.1|AE013797_1 hypothetical protein y1940 [Yersinia pestis KIM 10]
 gi|51589914|emb|CAH21546.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108775663|gb|ABG18182.1| hypothetical protein YPN_1853 [Yersinia pestis Nepal516]
 gi|152959779|gb|ABS47240.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis IP
           31758]
 gi|167056021|gb|EDR65799.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750626|gb|ACA68144.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186698714|gb|ACC89343.1| ErfK/YbiS/YcfS/YnhG family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229680662|gb|EEO76758.1| hypothetical protein YP516_2061 [Yersinia pestis Nepal516]
 gi|270338998|gb|EFA49775.1| ErfK/YbiS/YcfS/YnhG [Yersinia pestis KIM D27]
 gi|320015053|gb|ADV98624.1| hypothetical protein YPC_2032 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 354

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 59/181 (32%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++ R TP + + I++ + NP W    
Sbjct: 95  DTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRDTPTMVTSISQKIPNPTWTPTA 154

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +            YL +                                  G  N M
Sbjct: 155 NIRKN-----------YLAE------------------------GITLPSVVPAGPDNPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 180 GQFALRLSAGRGEYLIHGTNAD--FGIGLR-VSSGCIRLR-PDDI-EALFNSVPKGTRVQ 234

Query: 368 I 368
           I
Sbjct: 235 I 235


>gi|119485108|ref|ZP_01619493.1| hypothetical protein L8106_06659 [Lyngbya sp. PCC 8106]
 gi|119457336|gb|EAW38461.1| hypothetical protein L8106_06659 [Lyngbya sp. PCC 8106]
          Length = 204

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 54/198 (27%), Gaps = 60/198 (30%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM--------GLRYVLVNIPAASLEAVENGK 212
           T   +      R   +  NL+                      +++ +    +    N +
Sbjct: 37  TSSEVAQGASTRAAVIPSNLLNPTLPGLDDPSRFLPLGKPKMQLVLRLAQRRVFVYRNDQ 96

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                 V VG+   +TP    ++ +++ NP W  P                         
Sbjct: 97  QVASYPVAVGKPGWETPTGQFQVIQMVENPTWQNP------------------------- 131

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTYMHDTPEPI 330
                  EV                    PG  +A+    I F+   ++    H TP   
Sbjct: 132 ----WTGEVS------------------SPGPNSALGLRWIGFWTDGKDTIGFHGTPTVN 169

Query: 331 LFNNVVRFETSGCVRVRN 348
                 R  + GCVR+RN
Sbjct: 170 SIG---RAASHGCVRMRN 184


>gi|87199978|ref|YP_497235.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
 gi|87135659|gb|ABD26401.1| ErfK/YbiS/YcfS/YnhG [Novosphingobium aromaticivorans DSM 12444]
          Length = 379

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 84/321 (26%), Gaps = 83/321 (25%)

Query: 104 LGNSSVS------VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            G  + +      V + +  L   G       +         +AV+ FQ  +G+  SG  
Sbjct: 50  PGQPAPAEDMPRPVMQAQVVLERLGFAP--GIIDGKEGLSTRNAVQGFQEANGIAVSGNF 107

Query: 158 DSSTLEAMNV---PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           D +T++A+         R+  +  +                             E     
Sbjct: 108 DRATMQALARWSNIPATRLVTIPDDFAHGP-FAPLPKEPAAQAKLKALGYASLEEKLAER 166

Query: 215 LRSTVIVGRVD------------------RQTPILHSRINRIMFNPYW------------ 244
             +T  V R                    R+TP+++    +I                  
Sbjct: 167 FHTTPEVLRALNAPPVQQPIASSAAVEATRRTPVIYRAGQQIRVPNVGADAIDPVAVGDQ 226

Query: 245 -------------VIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEV-D 287
                          P+    + +++      +    +N  +       G E     + +
Sbjct: 227 GALETMASLGVGSNQPK--AGRIVVSEHAGTLKAFDASNKLVALFTVTTGSEHDPLPLGN 284

Query: 288 WNSPEP-PNFIFR-----------------QDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
           W       N  FR                   PG    +    I+    +   +H TPEP
Sbjct: 285 WKIYSSSFNPHFRYDASLFWDVPDSKGEHLLPPGPNGPVGVVWIDLSKEH-YGIHGTPEP 343

Query: 330 ILFNNVVRFETSGCVRVRNII 350
                  R E+ GCVR+ N  
Sbjct: 344 QTIG---RTESHGCVRLTNWD 361


>gi|56750889|ref|YP_171590.1| hypothetical protein syc0880_c [Synechococcus elongatus PCC 6301]
 gi|56685848|dbj|BAD79070.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 208

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 42/159 (26%), Gaps = 54/159 (33%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +    +        V +G+   +TP    R+   + NP W  P              
Sbjct: 90  QRRVTVYRDRLAIASYPVGIGKPGWETPRGTFRVMSKIVNPTWQHPW------------- 136

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRN 319
                           G  V                    PG  N +    I F+   +N
Sbjct: 137 ---------------NGSLV-------------------PPGPNNPLGDRWIGFWTDGKN 162

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +   H T    L        + GCVR++N  I  L   +
Sbjct: 163 SIGFHGTTAESLIGQ---AVSHGCVRMKNRDIRALFELV 198


>gi|238791662|ref|ZP_04635299.1| hypothetical protein yinte0001_13750 [Yersinia intermedia ATCC
           29909]
 gi|238728766|gb|EEQ20283.1| hypothetical protein yinte0001_13750 [Yersinia intermedia ATCC
           29909]
          Length = 355

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 70/222 (31%), Gaps = 42/222 (18%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        +++N+    L     
Sbjct: 56  IAADYKIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           G+   +   + +G++ R TP + + +++ + NP W  P + I+K  +A            
Sbjct: 116 GQSKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PTANIRKHYLAQ----------- 163

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                                            G  N M    +   +    Y +H T  
Sbjct: 164 -----------------------GVTLPSVVPAGPENPMGLFAMRLSAGGGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
              F   +R  +SGC+R+R   D+   L    P  +R  I  
Sbjct: 201 N--FGIGMR-VSSGCIRLR-PDDI-KALFSSVPKGTRVQIVN 237


>gi|149187438|ref|ZP_01865736.1| hypothetical protein VSAK1_17982 [Vibrio shilonii AK1]
 gi|148838974|gb|EDL55913.1| hypothetical protein VSAK1_17982 [Vibrio shilonii AK1]
          Length = 303

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 47/197 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   E  K  +    V +GR+ + TP + ++I+++   P W  P SI +K+
Sbjct: 94  IVINLAELRLYYFEPDKNLVHIFPVGIGRIGQDTPEMTTKISQLREAPTWTPPTSI-RKE 152

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +A                                             G  N +    + 
Sbjct: 153 YLAK----------------------------------GVELPKVVPAGPENPLGDYAMR 178

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                 +Y +H T +   F   +R  ++GC+R+ +  D+  WL        +  I +   
Sbjct: 179 LAYGTGSYLIHGTNKD--FGIGLR-VSAGCIRM-DPKDI-DWLFHQAKVGMQVRIID--- 230

Query: 374 TRKTTPVKLATEVPVHF 390
             +   + L  +  V  
Sbjct: 231 --EPIKIALEPDRSVFI 245


>gi|304397642|ref|ZP_07379519.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304354814|gb|EFM19184.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 341

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 55/211 (26%)

Query: 173 IRQLQVNLMRIKKLLEQ-------------KMGLRYVLVNIPAASLEAVENGKVG-LRST 218
           +  L+ N      L +                    ++VN+    L     G+   +   
Sbjct: 64  LGLLEANPGTDPWLPKAGTQLTVPLQMILPDTPREGIVVNLAELRLYYYPKGEDKVIVYP 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + +G++   TP++ ++I++ + NP W    +I ++                         
Sbjct: 124 IGIGQLGAATPVMVTQISQKIPNPTWTPTPNIRKR------------------------- 158

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVR 337
                      + E          G  N M    +        Y +H T     F   +R
Sbjct: 159 ----------YAKEGITLPGVVPAGPDNPMGQFAMRLARGTGQYLIHGTNAK--FGIGMR 206

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +SGC+R+R   +    L    P  +R  I
Sbjct: 207 -VSSGCIRLR--SEDIEALFNAAPKGTRVQI 234


>gi|262273986|ref|ZP_06051798.1| hypothetical protein VHA_000962 [Grimontia hollisae CIP 101886]
 gi|262221796|gb|EEY73109.1| hypothetical protein VHA_000962 [Grimontia hollisae CIP 101886]
          Length = 320

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 65/163 (39%), Gaps = 41/163 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L   + + +      + +GR+ R TPI+ ++I++   NP W  P S+ ++ 
Sbjct: 98  IVINLAELRLYYFDTDNRKVHVFPIGIGRIGRDTPIMQTKISQKRENPTWTPPASLRKE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                     YL++ NI +                             G  N + +  + 
Sbjct: 157 ----------YLEERNIVL-----------------------PDVVPAGPDNPLGTHALR 183

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
                 +Y +H T +   F   +R  ++GC+R+R   D+  WL
Sbjct: 184 LAYGTGSYLIHGTNK--SFGIGLR-VSAGCIRMR-PTDIV-WL 221


>gi|237756813|ref|ZP_04585300.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691029|gb|EEP60150.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 468

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 50/215 (23%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRV 224
           P D+R  Q+ V  ++ + L  +      + +NI    L     + +    +   + +G  
Sbjct: 257 PFDIRKNQIIVVPLK-RILPVKDFKYGTIYINIYEKRLYYPIKINDESYVITYPIGIGTD 315

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
           D Q+PI   +I++   +P W  P SI ++                               
Sbjct: 316 DAQSPIGEFKISQKRKDPAWYPPESIRKEQ------------------------------ 345

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                    P+      PG  N + +  +   +  +  MH T +           + GC+
Sbjct: 346 ---------PDLPPVFPPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMK---VSHGCI 392

Query: 345 RV--RNIIDLDVWLLKDTPTWSRYHIEEV-VKTRK 376
           R+   ++  L   +   TP  SR +  ++ V + K
Sbjct: 393 RMYNEDVEKLFEVVDIGTPIVSRENPYKIFVNSGK 427


>gi|300716485|ref|YP_003741288.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299062321|emb|CAX59438.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 344

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 55/211 (26%)

Query: 173 IRQLQVNLMRIKKLLEQ-------------KMGLRYVLVNIPAASLEAVENGK-VGLRST 218
           +  L+ N      L +                    ++VN+    L     G+   +   
Sbjct: 63  LGMLEANPGTDPWLPKAGSQLTIPTQMLLPDTKREGIVVNVAELRLYYYPKGENKVVVYP 122

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + +G++   TP + + +++ + NP W    +I ++                         
Sbjct: 123 IGIGQLGANTPPMVTSVSQKIPNPTWTPTPNIRKR------------------------- 157

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVR 337
                      + E          G  N M    +        Y +H T     F   +R
Sbjct: 158 ----------YAAEGKTLPVTVPAGPDNPMGLYAMRLAYGQGHYLIHGTNAD--FGIGMR 205

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +SGC+R+R   D+   L    P  +R  I
Sbjct: 206 -VSSGCIRLR-PDDI-EALFNSVPKGTRVQI 233


>gi|238787126|ref|ZP_04630926.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC
           33641]
 gi|238724914|gb|EEQ16554.1| hypothetical protein yfred0001_6120 [Yersinia frederiksenii ATCC
           33641]
          Length = 355

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +    +   N   D  +      L    ++L        +++N+    L     
Sbjct: 56  IAADYKIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           G+   +   + +G++ R TP + + +++ + NP W  P + I+K  +             
Sbjct: 116 GQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PTANIRKHYL------------- 161

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                                 E          G  N M    +   +    Y +H T  
Sbjct: 162 ---------------------AEGVTLPAVVPAGPENPMGLFAMRLAAGGGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L K  P  +R  I
Sbjct: 201 --NFGIGMR-VSSGCIRLR-PDDI-EALFKSVPKGTRVQI 235


>gi|294636112|ref|ZP_06714538.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda ATCC 23685]
 gi|291090579|gb|EFE23140.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda ATCC 23685]
          Length = 337

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L      G+      + +G++ R TP + +R+++ + +P W    
Sbjct: 95  DAPREGIVINLAELRLFYYPPGGERVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTWTPTA 154

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       +          G  N M
Sbjct: 155 NIRRH-----------------------------------YREQGITLPAVMPAGPDNPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   ++   Y +H T     F   +R  +SGC+R+R   D+   L +  P  +R  
Sbjct: 180 GRYALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-EALFRSVPGNTRVQ 234

Query: 368 IEEV 371
           I   
Sbjct: 235 IVNQ 238


>gi|88859637|ref|ZP_01134277.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Pseudoalteromonas
           tunicata D2]
 gi|88818654|gb|EAR28469.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Pseudoalteromonas
           tunicata D2]
          Length = 306

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 42/227 (18%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR-STVIVG 222
           A N  VD  + QL+  +    +++        ++VN+P   L   E  K  +    + +G
Sbjct: 65  AANPNVDPLLPQLETQITLPTQMILPSTAQVGIVVNLPELRLYYFEPEKSQVHVYPIGIG 124

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +   +TP+  S I++   +P W++P  + ++           YL + NI +         
Sbjct: 125 QKGHRTPVTRSFISQKRKSPDWIVPEPLRKR-----------YLTEKNIVL--------- 164

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                               G  N + S  +         +H T +   F       +SG
Sbjct: 165 --------------PPIVPAGPDNPLGSYAMRLGKSE-YLIHGTNQR--FGIG-LSVSSG 206

Query: 343 CVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVP 387
           C+R+   +I +L   +  +TP        +++ T + T V L    P
Sbjct: 207 CIRMFESDIEELFNRVELNTPVRIIDQPVKLLLTEQNT-VYLEVHSP 252


>gi|238919740|ref|YP_002933255.1| hypothetical protein NT01EI_1844 [Edwardsiella ictaluri 93-146]
 gi|238869309|gb|ACR69020.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 340

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+  +    + +G++ R TP + +RI++ + +P W    
Sbjct: 94  DAPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRDTPEMVTRISQHIKDPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       +  +       G  N M
Sbjct: 154 NIRRD-----------------------------------YQAQGISLPAVMPAGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   ++   Y +H T     F   +R  +SGC+R+R   D+   L +  P  +R  
Sbjct: 179 GRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-EALFRSVPGGTRVQ 233

Query: 368 IEEV 371
           I   
Sbjct: 234 IVNQ 237


>gi|242239100|ref|YP_002987281.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
 gi|242131157|gb|ACS85459.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 327

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     GK   +   + +G++ R TP++ +R+     NP W+   
Sbjct: 94  DTPREGIVVNLAELRLYYFPKGKGTVIVYPIGIGQLGRNTPVMVTRVIERRPNPTWIPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       +  +       G  N M
Sbjct: 154 NIRRH-----------------------------------YKEQGIDLPAVVPGGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T     F   +R  +SGC+R+R   D+   L  D P  +R  
Sbjct: 179 GLFALRLEKSGGVYSIHGTNAN--FGIGMR-VSSGCIRLR-PEDI-EALFNDVPVGTRVQ 233

Query: 368 I 368
           I
Sbjct: 234 I 234


>gi|81299458|ref|YP_399666.1| hypothetical protein Synpcc7942_0647 [Synechococcus elongatus PCC
           7942]
 gi|81168339|gb|ABB56679.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 180

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 42/159 (26%), Gaps = 54/159 (33%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +    +        V +G+   +TP    R+   + NP W  P              
Sbjct: 62  QRRVTVYRDRLAIASYPVGIGKPGWETPRGTFRVMSKIVNPTWQHPW------------- 108

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRN 319
                           G  V                    PG  N +    I F+   +N
Sbjct: 109 ---------------NGSLV-------------------PPGPNNPLGDRWIGFWTDGKN 134

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +   H T    L        + GCVR++N  I  L   +
Sbjct: 135 SIGFHGTTAESLIGQ---AVSHGCVRMKNRDIRALFELV 170


>gi|330860174|emb|CBX70495.1| hypothetical protein YEW_AT04140 [Yersinia enterocolitica W22703]
          Length = 112

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 2/85 (2%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +      +   +  AVK FQ  HGL   G++ + T E +NV    R   L +N+ R++ 
Sbjct: 14  TATVTDNVYTPELMEAVKRFQRWHGLSDDGVIGARTREWLNVSPQTRATLLALNIQRLRI 73

Query: 186 LLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +      ++VNIP  SL   + 
Sbjct: 74  LPGRV--DNGIMVNIPNYSLNYYKK 96


>gi|308186671|ref|YP_003930802.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
 gi|308057181|gb|ADO09353.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
          Length = 341

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 77/254 (30%), Gaps = 56/254 (22%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           RLI    L             +ES    +Q+  GL      +  T   +          L
Sbjct: 35  RLIGENVLTQVPDDKQ----PLESIAARYQV--GLLGMLEANPGTDPWLPKAGTQLTVPL 88

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRI 235
           Q+ L               ++VN+    L     G+   +   + +G++   TP++ ++I
Sbjct: 89  QMIL--------PDTPREGIVVNLAELRLYYYPKGEDKVIVYPIGIGQLGAATPVMVTQI 140

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
           ++ + NP W    +I ++                                    + E   
Sbjct: 141 SQKIPNPTWTPTPNIRKR-----------------------------------YAKEGIT 165

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                  G  N M    +        Y +H T     F   +R  +SGC+R+R   +   
Sbjct: 166 LPGVVPAGPDNPMGQFAMRLARGTGQYLIHGTNAK--FGIGMR-VSSGCIRLR--SEDIE 220

Query: 355 WLLKDTPTWSRYHI 368
            L    P  +R  I
Sbjct: 221 ALFNAAPKGTRVQI 234


>gi|238753642|ref|ZP_04615004.1| hypothetical protein yruck0001_13730 [Yersinia ruckeri ATCC 29473]
 gi|238708194|gb|EEQ00550.1| hypothetical protein yruck0001_13730 [Yersinia ruckeri ATCC 29473]
          Length = 346

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 47/204 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++ R TP + + +++ + NP W  P 
Sbjct: 95  DTPREGIVINLAELRLYYYPKGQDKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PT 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + I+K  +A                                             G  N M
Sbjct: 154 ANIRKHYLAQ----------------------------------GVTLPAVVPAGPENPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-- 365
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 180 GLFAMRLAAGGGEYLIHGTNA--NFGIGMR-VSSGCIRLR-PDDI-QALFSSVPKGTRVQ 234

Query: 366 ---YHIEEVVKTRKTTPVKLATEV 386
                I+  V+      V++   +
Sbjct: 235 VINEPIKYSVEPDGKRYVEVHQPL 258


>gi|158334241|ref|YP_001515413.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017]
 gi|158304482|gb|ABW26099.1| ErfK/YbiS/YcfS/YnhG family protein [Acaryochloris marina MBIC11017]
          Length = 201

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 56/214 (26%)

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNL---MRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           ++   T+ + +V         +  L    + +  L    G R + ++I    +   +  +
Sbjct: 31  VISVGTIASFDVAQAAEQNIPETPLPGLDQPRNYLPSAHGTRRLELSISRRQVTLFQGDQ 90

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V     V VG+    TP+    +   + NP W  P                   +     
Sbjct: 91  VLKSYPVAVGKAGWPTPVGDFEVQTKVRNPSWQNP------------------FQGKGYV 132

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFY--SRNNTYMHDTPEP 329
           +                             G   N +++  + F+   +N    H TP  
Sbjct: 133 I---------------------------PGGAPDNPLSTRWLGFWTNGKNWIGFHGTPNR 165

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +     + GCVR+   +I +L   +   TP
Sbjct: 166 ASVGS---AASHGCVRMYDEHIQELFELVAVGTP 196


>gi|197117361|ref|YP_002137788.1| peptidoglycan L,D-transpeptidase [Geobacter bemidjiensis Bem]
 gi|197086721|gb|ACH37992.1| peptidoglycan L,D-transpeptidase, YkuD family, LysM
           domain-containing protein [Geobacter bemidjiensis Bem]
          Length = 307

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 46/173 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKV--GLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++ +      ++VN+    L     GK        + +G    +TP+    + + + +P
Sbjct: 100 WIVPRVQSDPDIVVNLAEYRLYLFPQGKFGAVFTFPLGIGDEGAETPLGTYTVIQKITSP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI  +                                        P       P
Sbjct: 160 SWHVPDSIRHE---------------------------------------VPGLPSIVPP 180

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           G  N + +  +    R N  +H T  P       R  + GC+R+    D+   
Sbjct: 181 GPSNPLGTHALRLS-RANILIHGTNRPWGIG---RRSSHGCLRLY-PEDIATL 228


>gi|317047896|ref|YP_004115544.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949513|gb|ADU68988.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 344

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 65/204 (31%), Gaps = 47/204 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++   TP++ + I++ + NP W    
Sbjct: 94  DTPHEGIVINLAELRLYYYPKGEDRVIVYPIGIGQLGAATPVMVTSISQKIPNPTWTPTP 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I ++                                    + E          G  N M
Sbjct: 154 NIRKR-----------------------------------YAKEGITLPGVVPAGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 179 GLFAMRLARGTGQYLIHGTNAD--FGIGMR-VSSGCIRLR-PEDI-EALFDSVPKGTRVQ 233

Query: 368 -----IEEVVKTRKTTPVKLATEV 386
                ++  ++      +++   +
Sbjct: 234 VINQPVKYAIEPDGKRYIEVHQPL 257


>gi|328954135|ref|YP_004371469.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328454459|gb|AEB10288.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 346

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 66/239 (27%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + +L   +    +L+N+P  +L   +      R  + VG+ D QTP     I   + NP 
Sbjct: 89  RFILPNDLTD-GLLINLPELTLYHFDKEVFRRRYALAVGKSDWQTPTGTYIILNKVKNPT 147

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W++P SI ++            +++    ++                        R  PG
Sbjct: 148 WIVPASIQEE------------MEEMGKTVLT-----------------------RVPPG 172

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N + +  +   +     +H T  P        + + GC+R+    +++    +     
Sbjct: 173 PTNPLGAYWMATSAP-GVGIHATTRPWSIGY---YASHGCIRML-PDEIEELFGQVEVGT 227

Query: 364 SRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII--QFRDDIYGL--DNVHVG 418
               I +                PV           D+ I  +   D+Y    D++ + 
Sbjct: 228 LVKIIYK----------------PVKLA-----VTPDNRIFLEVHRDVYKKIPDSLAMA 265


>gi|188996949|ref|YP_001931200.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932016|gb|ACD66646.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 464

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 48/189 (25%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            + L  +      + +NI    L     + +    +   + +G  + Q+PI   +I++  
Sbjct: 267 KRILPVKDFKYGMIYINIYEKRLYYPIKINDESYVITYPIGIGADEAQSPIGEFKISQKR 326

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            +P W  P SI ++                                        P+    
Sbjct: 327 KDPAWYPPESIRKEQ---------------------------------------PDLPPV 347

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLL 357
             PG  N + +  +   +  +  MH T +           + GC+R+   ++  L   + 
Sbjct: 348 FPPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMK---VSHGCIRMYNEDVEKLFEVVD 403

Query: 358 KDTPTWSRY 366
             TP  SR 
Sbjct: 404 IGTPIVSRE 412


>gi|149377350|ref|ZP_01895095.1| putative ErfK/YbiS/YcfS/YnhG family protein [Marinobacter algicola
           DG893]
 gi|149358362|gb|EDM46839.1| putative ErfK/YbiS/YcfS/YnhG family protein [Marinobacter algicola
           DG893]
          Length = 355

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 62/199 (31%), Gaps = 44/199 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +    +++N+    L     GKV     V VG  D  +P+ ++++   + +P W  P S
Sbjct: 116 DVKREGIIINLAEYRLYYFTEGKVQ-VYPVGVGTDDNPSPLTNAKVTMPLESPAWYPPAS 174

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I  +                                                PG  N + 
Sbjct: 175 IRAE-----------------------------------YEAAGEYLPRMIPPGPGNPLG 199

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           S  +    +    +H T +  LF   +   + GC R+ N  D+  ++ + +       I 
Sbjct: 200 SHALMLSEK-GYLIHGTNK--LFGVGM-QVSHGCFRMYN-EDISRFVYEVSKGTPVQVIR 254

Query: 370 EVVK---TRKTTPVKLATE 385
           E VK         +++   
Sbjct: 255 EPVKIGLKGNEVWLEVHRP 273


>gi|206889744|ref|YP_002249108.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741682|gb|ACI20739.1| LysM domain protein [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 309

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 49/183 (26%)

Query: 185 KLLEQKMGLRY-VLVNIPAASLEAVEN---GKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +L  ++     +++N+    L         ++     + +G    +TP+   +I+  + 
Sbjct: 86  WILPDRVNNFQGIIINLSEMRLYYFHKKSKEQLVTTFPIGIGDDGVETPMGKFKISHKIV 145

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W +P SI Q+                                        P      
Sbjct: 146 NPPWYVPESIKQER---------------------------------------PELPAVV 166

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            PG  N + +  +      +  +H T  P       R  T GC+R+   +I  L   +  
Sbjct: 167 PPGPENPLGTHAMRLS-GLSYLIHGTNRPWAVG---RKVTHGCIRLYPEDIPKLFDIVPV 222

Query: 359 DTP 361
            T 
Sbjct: 223 GTE 225


>gi|30249623|ref|NP_841693.1| hypothetical protein NE1659 [Nitrosomonas europaea ATCC 19718]
 gi|30138986|emb|CAD85570.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 326

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 75/224 (33%), Gaps = 55/224 (24%)

Query: 147 MRHGLDPSGMV--DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
             +G+    MV  + +T   +       +  L     R      +++G   +++N+P   
Sbjct: 60  RHYGIGQDEMVLANPNTNRWLPEDGAEVVLPL-----RFIIPQAERIG---LVINLPEMR 111

Query: 205 LEAVEN---GK--VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           L        G+    +   V +GR+D  TP+  + I R   +P W  P+S+  + +    
Sbjct: 112 LYYFPKPAKGQKPEIITHPVSIGRMDWNTPLGRTTIVRKQKDPTWTPPQSLKAEAI---- 167

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
                                         +   P       PG  N +    +      
Sbjct: 168 ------------------------------AEGKPPLSDVVPPGPDNPLGRYALYLGLP- 196

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
              +H T +P  F   +R  T GC+R+   +I +L   +   TP
Sbjct: 197 GYLIHSTNKP--FGVGMR-VTHGCMRLYPEDIEELFNLVPTGTP 237


>gi|220929989|ref|YP_002506898.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
 gi|220000317|gb|ACL76918.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
          Length = 307

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 71/248 (28%), Gaps = 63/248 (25%)

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
             G    +          + +A+ LFQ  H +  +G  D++T   +       +++L  N
Sbjct: 97  QLGYYKKASSDEKL---NIRNALLLFQSNHNMSVTGAYDTATKNML-------VQRLSSN 146

Query: 180 -LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
             + + K+ +     ++V VN     L   E  KV  +  V VG     T      +   
Sbjct: 147 KFVYLDKVTKAPTKGKWVTVNKTTRVLTLYEGTKVLKKYAVAVGNPASLTKSGKFIVTSK 206

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
           + NP W                                 G                    
Sbjct: 207 LKNPDW-------------------------------GGGGFADP--------------- 220

Query: 299 RQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
            +     N + +  +     +    +H T           + + GC+R+ N  + +L   
Sbjct: 221 VKGGTPQNPLGTRWLGINRTDGSYGIHGTNSFYSIGK---YISHGCMRMSNHCVEELFPL 277

Query: 356 LLKDTPTW 363
           +    P W
Sbjct: 278 VPMKAPVW 285


>gi|238749439|ref|ZP_04610944.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380]
 gi|238712094|gb|EEQ04307.1| hypothetical protein yrohd0001_27560 [Yersinia rohdei ATCC 43380]
          Length = 351

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 71/220 (32%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-E 209
           +     +    +   N   D  +      L    ++L        +++N+    L    +
Sbjct: 56  IAADYKIGLLGMLEANPGADPYLPLPGSVLTIPTQMLLPDTPREGIVINLAELRLYYYPK 115

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +    +   + +G++ R TP + + +++ + NP W  P + I+K  +             
Sbjct: 116 DQNKVVVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PTANIRKHYL------------- 161

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                                 E          G  N M    +   +    Y +H T  
Sbjct: 162 ---------------------AEGVTLPAVVPAGPENPMGLFAMRLAAGGGEYLIHGTNA 200

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L K  P  +R  I
Sbjct: 201 N--FGIGMR-VSSGCIRLR-PDDI-EALFKSVPKGTRVQI 235


>gi|158423350|ref|YP_001524642.1| signal transduction protein [Azorhizobium caulinodans ORS 571]
 gi|158330239|dbj|BAF87724.1| signal transduction protein [Azorhizobium caulinodans ORS 571]
          Length = 406

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 66/283 (23%), Gaps = 48/283 (16%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM---R 182
               +          A+  F+ ++ L     +D +T  A+  P    I           R
Sbjct: 138 SPGEIDGMDGENYRKALAQFRRQNALGEGDRLDEATWAALGGPTTTDIVTTYTVTAKDAR 197

Query: 183 IKKLLEQKMGLRYVLVNIP--AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           ++               +     +    E        +  + +            + I  
Sbjct: 198 MR-FPRTIPHDFAKQARMKRLDFT-SPTEMYAERFHMSEGLLKALNPRLKTLKAGDAISV 255

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--------------GKEVFVEEV 286
                   +   + M A+       L      +I                   +V     
Sbjct: 256 LQVAHDRPTQPVERMEAVKATGMLVLYGPGDAIIASYPATIGSADTPSPEGDYKVLRIAH 315

Query: 287 DWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           D      P   F+Q          PG  N + +  I         +H TP P   +    
Sbjct: 316 DPRYEYDPKKNFQQGRNTRRLMLPPGPNNPVGTVWIALSKP-TFGIHGTPAPSQVSKTS- 373

Query: 338 FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV 380
             + GCVR+ N              W    +  ++K       
Sbjct: 374 --SHGCVRLTN--------------WDAEEVAALIKPGVKMRF 400


>gi|183598859|ref|ZP_02960352.1| hypothetical protein PROSTU_02291 [Providencia stuartii ATCC 25827]
 gi|188021066|gb|EDU59106.1| hypothetical protein PROSTU_02291 [Providencia stuartii ATCC 25827]
          Length = 357

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 42/179 (23%)

Query: 192 GLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L    E  K  +   + +G++ R TP + + +++ + +P W    +I
Sbjct: 94  PRTGIIINLAELRLYYYPEGSKEVVVYPIGIGQLGRDTPEMVTSVSQSIKDPTWTPTANI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            +                                     + E          G  N M  
Sbjct: 154 RKN-----------------------------------YAKEGITLPAVVPAGPDNPMGL 178

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +        Y +H T     F   +R  +SGC+R+R   D+   L K  P  +R  +
Sbjct: 179 YALRLAYGRGEYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-EALFKTVPKGTRVQV 232


>gi|268592601|ref|ZP_06126822.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rettgeri DSM 1131]
 gi|291312015|gb|EFE52468.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rettgeri DSM 1131]
          Length = 354

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 43/191 (22%)

Query: 192 GLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               +++N+    L     N +  +   + +G++ R TP + + +++ + +P W    +I
Sbjct: 94  PRTGIVINLAELRLYYYPANSEEVIVYPIGIGQLGRDTPEMVTSVSQSIKDPTWTPTANI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            +                                     + E          G  N M  
Sbjct: 154 RKN-----------------------------------YAKEGITLPAVVPAGPENPMGL 178

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHI 368
             +        Y +H T     F   +R  +SGC+R+R   D+   L K  P  +R   I
Sbjct: 179 YALRLAYGRGEYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-EALFKTVPKGTRVQVI 233

Query: 369 EEVVKTRKTTP 379
           ++ VK  K T 
Sbjct: 234 DQPVKYSKETD 244


>gi|238757747|ref|ZP_04618930.1| hypothetical protein yaldo0001_35040 [Yersinia aldovae ATCC 35236]
 gi|238703990|gb|EEP96524.1| hypothetical protein yaldo0001_35040 [Yersinia aldovae ATCC 35236]
          Length = 351

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 60/183 (32%), Gaps = 42/183 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+   +   + +G++ R TP + + +++ + NP W  P 
Sbjct: 95  DTPREGIVINLAELRLYYYPKGQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PT 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + I+K  +A                                             G  N M
Sbjct: 154 ANIRKHYLAQ----------------------------------GVTLPSVVPAGPENPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 180 GLFAMRLAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRLR-PDDI-QALFSTVPKGTRVQ 234

Query: 368 IEE 370
           I  
Sbjct: 235 IVN 237


>gi|148266086|ref|YP_001232792.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
 gi|146399586|gb|ABQ28219.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
          Length = 292

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 57/182 (31%), Gaps = 48/182 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            ++   +    +++N+    L      +  ++     + +G   + TP+   R+ + + N
Sbjct: 85  WIVPASLKWGGIVINLSEMRLYYSFSFKGARLIASFPIGIGDEGKDTPVGTFRVIQKIEN 144

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W +P+S+  +                                        P       
Sbjct: 145 PSWYVPQSVKME---------------------------------------KPELPDVVP 165

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
           PG  N + +  +         +H T +P       R  + GC+R+   +I  L   +   
Sbjct: 166 PGPDNPLGTHAMRLS-ERTILIHGTNKPWGVG---RRVSHGCIRLYPEDIPRLYRLVAVG 221

Query: 360 TP 361
           TP
Sbjct: 222 TP 223


>gi|238796357|ref|ZP_04639866.1| hypothetical protein ymoll0001_21850 [Yersinia mollaretii ATCC
           43969]
 gi|238719802|gb|EEQ11609.1| hypothetical protein ymoll0001_21850 [Yersinia mollaretii ATCC
           43969]
          Length = 289

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L    ++    +   + +G++ R TP + + +++ + NP W  P 
Sbjct: 29  DTPREGIVINLAELRLYYYPKDQNKVIVYPIGIGQLGRNTPTMTTSVSQKIPNPTWT-PT 87

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + I+K  +                                   E          G  N M
Sbjct: 88  ANIRKHYL----------------------------------AEGVTLPAVVPAGPENPM 113

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L K  P  +R  
Sbjct: 114 GLFAMRLSAGRGEYLIHGTNAN--FGIGMR-VSSGCIRLR-PDDI-EALFKSVPKGTRVQ 168

Query: 368 I 368
           I
Sbjct: 169 I 169


>gi|332712211|ref|ZP_08432139.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L]
 gi|332349017|gb|EGJ28629.1| hypothetical protein LYNGBM3L_72340 [Lyngbya majuscula 3L]
          Length = 205

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 48/154 (31%), Gaps = 52/154 (33%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           ++ +    L      K+     V +G+   +TP  + ++ +++ NP W  P +       
Sbjct: 82  VIKLSERRLYVYRGDKLEASYPVAIGQPGWETPTGNFQVTQMVQNPVWKHPLT------- 134

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                G+ V                    PG  N +    + F+
Sbjct: 135 ---------------------GEVV-------------------APGPENPLGPRWMAFW 154

Query: 317 SR--NNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           S   N    H T +  L        + GC+R+RN
Sbjct: 155 SDGTNYIGFHGTNDEELVGQ---AVSHGCIRMRN 185


>gi|322833496|ref|YP_004213523.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321168697|gb|ADW74396.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 337

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     G+   +   + +G++ R TP + + +++ + NP W  P 
Sbjct: 95  DTKREGIVVNLAEMRLYYYPKGEDKVIVYPIGIGQLGRNTPEMVTSVSQKIPNPTWT-PT 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + I+K  +                                   E          G  N M
Sbjct: 154 ANIRKAYLK----------------------------------EGITLPGMVPAGPDNPM 179

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 180 GLFAMRLSAGTGQYLIHGTNAN--FGIGMR-VSSGCIRLR-PDDI-EALFNSVPKGTRVQ 234

Query: 368 IEEV 371
           I   
Sbjct: 235 IVNQ 238


>gi|167041966|gb|ABZ06703.1| putative ErfK/YbiS/YcfS/YnhG [uncultured marine microorganism
           HF4000_141E02]
          Length = 313

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 40/157 (25%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + +N+         N +  +   V +GR+D  TP+  S+++  + NP W  P S+ Q+  
Sbjct: 104 MTINLAEYR-GFFANDEELITFPVGIGRMDWTTPLGISKVDLKLENPAWYPPLSVRQE-- 160

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               E          G  N +    +  
Sbjct: 161 ---------------------------------YQEEGIYLAPVIPAGPDNPLGKLAMRL 187

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                 ++H T +P          + GC+R+    D+
Sbjct: 188 DIPGGYFIHGTNKPDGVGM---QVSHGCIRLF-PEDI 220


>gi|29654868|ref|NP_820560.1| LysM domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831280|ref|YP_001597412.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
 gi|29542137|gb|AAO91074.1| hypothetical exported protein [Coxiella burnetii RSA 493]
 gi|161763147|gb|ABX78789.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
          Length = 314

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P 
Sbjct: 90  PVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVPD 149

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI++                                                  G  N +
Sbjct: 150 SILRYR-----------------------------------QENGDPVPKMMPSGPENPL 174

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H T +P       R  ++GC+ +   +I  L   +  DTP
Sbjct: 175 GYYALRLSQP-TYLIHGTNDPSSVG---RRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|117619077|ref|YP_855859.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560484|gb|ABK37432.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 305

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 82/243 (33%), Gaps = 52/243 (21%)

Query: 157 VDSST------LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   T      L   N  VD  + +    L    ++L   +    +++N+P   L     
Sbjct: 53  IGKHTQIGFLALLEANPGVDPYLPKPGTRLTLPTQMLLPNVPREGIVINLPELRLYYFPK 112

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G + R+TP + + +     NP W +P  +++K                
Sbjct: 113 GKNEVMVLPIGIGDIGRETPEMTTTVIAKNPNPTW-VPGPMVRK---------------- 155

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                             W   +         PG  N +    +        Y +H T +
Sbjct: 156 -----------------SWLEQKGITLPAVVPPGPDNPLGKFAMRLGYGKQDYLIHGTNK 198

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----IEEVVKTRKTTPVKLA 383
              F   +R  ++GC+R+R   D+   L K  P  ++       ++  ++      +++ 
Sbjct: 199 D--FGVGLR-VSAGCIRLR-PDDI-EALFKIVPIGTQVRVINQPVKTAIEPDGRHWLEVH 253

Query: 384 TEV 386
           + +
Sbjct: 254 SPL 256


>gi|77919622|ref|YP_357437.1| hypothetical protein Pcar_2026 [Pelobacter carbinolicus DSM 2380]
 gi|77545705|gb|ABA89267.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 303

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 59/235 (25%), Gaps = 60/235 (25%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-------------LRYVLVNIPAA 203
           V  + +E         +   + N      L                      + +N+   
Sbjct: 53  VGETLIEIARQAGLGYLALCRANPDTDPWLPPAGDKIILPYAFLLPTDIKPGITINLAEF 112

Query: 204 SLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
            L  V   +N        V +G     TP     I   + +P W  P SI ++       
Sbjct: 113 RLYYVWQEQNRLRVRVYPVGIGSSGWDTPQGEFEITEKIVHPVWYAPASIRKE------- 165

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
                                            P    R   G  N +    +       
Sbjct: 166 --------------------------------NPRLAARIPAGPDNPLGEYWLGLS-ARG 192

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
             +H T +P       R  + GC+R+    D+     +  P  +   I + VKT 
Sbjct: 193 YGIHGTSKPYGVG---RRISHGCLRLY-PADIRDLFARVKPGTTVRIIRQPVKTG 243


>gi|330829008|ref|YP_004391960.1| LysM domain-containing protein [Aeromonas veronii B565]
 gi|328804144|gb|AEB49343.1| LysM domain protein [Aeromonas veronii B565]
          Length = 318

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 84/251 (33%), Gaps = 49/251 (19%)

Query: 146 QMRHGLDPSGM---VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           Q    L+  G    +    L   N  VD  + +    L    ++L   +    +++N+P 
Sbjct: 53  QQNEHLELVGKNTQIGFLALLEANPGVDPYLPKPGTRLTLPTQMLLPDVPREGIVINLPE 112

Query: 203 ASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             L     GK   +   + +G + R+TP + + +     NP W +P  +++K        
Sbjct: 113 LRLYYFPKGKSEVIVLPIGIGDIGRETPEMTTTVIEKNPNPTW-VPGPMVRK-------- 163

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-RNN 320
                                     W   +         PG  N +    +     + +
Sbjct: 164 -------------------------SWLEQKGITLPAVVPPGPENPLGKFAMRLGYGKRD 198

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE-----VVKTR 375
             +H T +   F   +R  ++GC+R+R   D+   L K  P  +   +        ++  
Sbjct: 199 YLIHGTNKE--FGVGLR-VSAGCIRLR-PDDI-EALFKIVPIGTPVRVINQPVKVAIEPD 253

Query: 376 KTTPVKLATEV 386
               +++ + +
Sbjct: 254 GRRWLEVHSPL 264


>gi|149911553|ref|ZP_01900167.1| hypothetical protein PE36_11747 [Moritella sp. PE36]
 gi|149805398|gb|EDM65408.1| hypothetical protein PE36_11747 [Moritella sp. PE36]
          Length = 287

 Score = 85.9 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 41/213 (19%)

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           H L     +    L A N  VD  +      L     +L   +  + +++N+P   L   
Sbjct: 37  HSLSQQYNIGLIALMASNPTVDPFLPSPGTRLDLPTLMLLPDVEHKGIVINLPELRLYYF 96

Query: 209 -ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            +N        V +GR  R+TP ++S +   + +P W    +   +           YL 
Sbjct: 97  PKNSNKVHVFPVGIGREGRETPQMNSFVKTKLKDPVWTPTPTTRAE-----------YLD 145

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-RNNTYMHDT 326
              + +                             GK N + S  ++    + N  +H T
Sbjct: 146 KYKMVL-----------------------PRIVQAGKHNPLGSFALQLAYGKRNYLIHGT 182

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                F   +R  ++GC+R+ N  D+  WL  +
Sbjct: 183 NTD--FGIGMR-ISAGCIRM-NPDDI-EWLYNN 210


>gi|307825945|ref|ZP_07656160.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733064|gb|EFO03926.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 338

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 58/193 (30%), Gaps = 45/193 (23%)

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-----VGLRSTVIVGRVDRQTPILH 232
           V L   + L         + +NI    +      +       +     +GR D +TP+  
Sbjct: 86  VRLSNRRILP--DTPHEGITLNIAEYRMYYYPPTQKGVAPQVMSYAHGIGRQDWKTPLGK 143

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
           + I + + +P W  P SI ++                                   ++  
Sbjct: 144 TSIVQKVKDPAWHPPESIRRE-----------------------------------HAAN 168

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNII 350
                    PG  N + +  +         +H T    ++   +   T GCVR+   +I 
Sbjct: 169 GDPLPAVVQPGPHNPLGAYMLHLAVPGGYLIHGTDIDKIYGIGM-QITHGCVRMYPEDIE 227

Query: 351 DLDVWLLKDTPTW 363
            L   +   TP +
Sbjct: 228 ALYNSVPVGTPVY 240


>gi|153208754|ref|ZP_01946992.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212212071|ref|YP_002303007.1| hypothetical protein CbuG_0434 [Coxiella burnetii CbuG_Q212]
 gi|212219291|ref|YP_002306078.1| hypothetical protein CbuK_1807 [Coxiella burnetii CbuK_Q154]
 gi|120575786|gb|EAX32410.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|212010481|gb|ACJ17862.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
 gi|212013553|gb|ACJ20933.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
          Length = 314

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P 
Sbjct: 90  PVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVPD 149

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI++                                                  G  N +
Sbjct: 150 SILRYR-----------------------------------QENGDPVPKMMPSGPENPL 174

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H T +P       R  ++GC+ +   +I  L   +  DTP
Sbjct: 175 GYYALRLSQP-TYLIHGTNDPSSVG---RRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|220934928|ref|YP_002513827.1| hypothetical protein Tgr7_1758 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996238|gb|ACL72840.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 424

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 59/202 (29%), Gaps = 44/202 (21%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLE-AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           R   L  Q      +++N+P   L          +   + +GR+D  TP+   R+ +   
Sbjct: 92  RRHILPRQ--HRSGIVINLPEMRLYDYTAGQDHIMTYAISIGRMDWSTPLGTLRVIQKTE 149

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P SI Q                                     +    +     
Sbjct: 150 QPTWTPPASIRQA-----------------------------------YAARGESLPAVV 174

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLK 358
            PG  N +    +   +  +  +H T  P      +R  T GC+R+   +I  L   +  
Sbjct: 175 PPGPDNPLGEFAMRLSNP-SYLIHGTNWPE--GIGMRA-THGCIRLAPSDIEHLFSRIPV 230

Query: 359 DTPTWSRYHIEEVVKTRKTTPV 380
            TP        +      T  +
Sbjct: 231 GTPVHIVNEPVKAGWDGDTLYL 252


>gi|253989393|ref|YP_003040749.1| hypothetical protein PAU_01913 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780843|emb|CAQ84005.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 358

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               + +++N+    L     GK   +   + +G++ R TP++ + +++++ +P W   +
Sbjct: 92  DTPRQGIVINLAELRLYYFPKGKNKVIVYPIGIGQLGRNTPVMTTSVSQLIKDPTWTPTK 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                     + +          G  N M
Sbjct: 152 NIRKH-----------------------------------YAEQGITLPAVVPAGPENPM 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 177 GLFALRLAAGRGEYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-EALFNSVPRGTRVQ 231

Query: 368 I 368
           I
Sbjct: 232 I 232


>gi|293396322|ref|ZP_06640600.1| LysM domain/ErfK/YbiS/YcfS/YnhG domain protein [Serratia odorifera
           DSM 4582]
 gi|291421111|gb|EFE94362.1| LysM domain/ErfK/YbiS/YcfS/YnhG domain protein [Serratia odorifera
           DSM 4582]
          Length = 340

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W    
Sbjct: 94  DTPREGIVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLKVTSVSQKIPNPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I ++                                    + +          G  N M
Sbjct: 154 NIRKR-----------------------------------YAAQGVTLPGVVPAGPENPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDT 360
               +     +  Y +H T     F   +R  +SGC+R+R  +I  L   + K T
Sbjct: 179 GLFAMRLSMGHGEYLIHGTNA--NFGIGMR-VSSGCIRLRPNDIEALFNMVPKGT 230


>gi|114320738|ref|YP_742421.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227132|gb|ABI56931.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 329

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 54/177 (30%), Gaps = 45/177 (25%)

Query: 192 GLRYVLVNIPAASLEAVE-----NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               V+VN+    L           +      V VGR+D +TP+  + I     +P W  
Sbjct: 100 PREGVVVNVAEMRLYYYRPVTAGERRRVETYPVSVGRMDWETPVGRTEITAKAEDPSWYP 159

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI             +Y +                        +         PG  N
Sbjct: 160 PESI------------REYARRE----------------------QGKELPRVVPPGPDN 185

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    +         +H T  P      +R  TSGC+R+   +I +L   L   TP
Sbjct: 186 PLGRHALRLGIP-GYLIHGTNRPW--GIGMR-VTSGCIRMYPEDIEELFPRLPVGTP 238


>gi|218249099|ref|YP_002374470.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801]
 gi|257062185|ref|YP_003140073.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802]
 gi|218169577|gb|ACK68314.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8801]
 gi|256592351|gb|ACV03238.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 8802]
          Length = 194

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 53/169 (31%), Gaps = 54/169 (31%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           ++N+    + A +N KV     V +G+   +TP  +  +  ++ NP W  P         
Sbjct: 72  VLNLKQRKVYAYQNDKVLASYPVAIGKKGWETPKGNFTVTSLIVNPKWKNP--------- 122

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                  +V                    PG  + +    I F 
Sbjct: 123 --------------------WTGKVS------------------APGPNSPLGERWIGFA 144

Query: 317 --SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
              ++    H TP   +        + GCVR+RN  I  L   + K TP
Sbjct: 145 TKGKDVIGFHGTPGEHVMGQ---AVSHGCVRMRNKDIKALFELVDKGTP 190


>gi|114567178|ref|YP_754332.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338113|gb|ABI68961.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 283

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 19/209 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +  S   +  +++RL   G           F    E+A+K FQ   GL   G+VD +T 
Sbjct: 12  KIRMSGPDIHLMQKRLKELGY--NPGVEDGIFGEQSEAALKAFQASRGLVVDGVVDPNTW 69

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             +     +R++    N    +           + +++    L     G       V VG
Sbjct: 70  LLLEPSSSIRLQ----NKREGQAW-----EQPRISIDVVKRRLTYTS-GSFKKTYPVAVG 119

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +    TP+ +  I +   NP        ++  +         Y   +  +     GK V 
Sbjct: 120 KPQTPTPLGNWTIVQKTVNPGGPFGARWMRLSVPW-----GGYGI-HGTNRPSSIGKAVS 173

Query: 283 VEEVDWNSPEPPNFIFRQDPG-KINAMAS 310
              V   + +      R   G  +N    
Sbjct: 174 HGCVRMYNADVIELYDRTPLGTPVNIFGK 202



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 39/150 (26%), Gaps = 18/150 (12%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P    R+        W  PR  I  D++                +   K +       +W
Sbjct: 74  PSSSIRLQNKREGQAWEQPR--ISIDVVKRRLTYTSGSFKKTYPVAVGKPQTPTPLG-NW 130

Query: 289 NSPEPPNFIFRQDP-GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                      Q          +  +        Y +H T  P          + GCVR+
Sbjct: 131 T--------IVQKTVNPGGPFGARWMRLSVPWGGYGIHGTNRPSSIGK---AVSHGCVRM 179

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
            N   +   L   TP  +  +I     T +
Sbjct: 180 YNADVI--ELYDRTPLGTPVNIFGKANTGR 207



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L  G+    V+ ++  L   G           F    E+AV  FQ  + L   G+V
Sbjct: 205 TGRVLSRGDQGSDVKEVQRMLRTLGYY--RVKPDGKFGPKTEAAVIAFQRDNQLIADGIV 262

Query: 158 DSSTLEAMNV 167
              T  A+  
Sbjct: 263 GPYTHHALQK 272


>gi|212712077|ref|ZP_03320205.1| hypothetical protein PROVALCAL_03156 [Providencia alcalifaciens DSM
           30120]
 gi|212685599|gb|EEB45127.1| hypothetical protein PROVALCAL_03156 [Providencia alcalifaciens DSM
           30120]
          Length = 359

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 42/220 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-E 209
           +     +    +   N   D  + ++   L+   ++L        +++N+    L    E
Sbjct: 62  IASDYQIGLLAMLEANPGTDPYLPEVGKPLIIPAQMLLPSTPRTGIVINLAELRLYYYPE 121

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           N +  +   + +G++ R TP + + I++++ +P W    +I +                 
Sbjct: 122 NSRKVVVYPIGIGQLGRDTPEMVTSISQLIKDPTWTPTTNIRKH---------------- 165

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
                               + +          G  N M    +        Y +H T  
Sbjct: 166 -------------------YAQQGITLPAVVPAGPENPMGLYALRLSYGRGEYLIHGTNA 206

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              F   +R  +SGC+R+R   D+   L  + P  +R  +
Sbjct: 207 N--FGIGMR-VSSGCIRLR-PDDI-KALFTNVPKGTRVQV 241


>gi|167041410|gb|ABZ06162.1| putative ErfK/YbiS/YcfS/YnhG [uncultured marine microorganism
           HF4000_006O13]
          Length = 313

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 40/157 (25%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + +N+         NG+  +   V +GR+D   P+  S+++  + NP W  P S+ Q+  
Sbjct: 104 MTINLAEYR-GFFANGEQLITFPVGIGRMDWTIPLGVSKVDLKLENPAWYPPASVRQE-- 160

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               E          G  N +    +  
Sbjct: 161 ---------------------------------YQEEGIYLAPVIPAGPDNPLGKLAMRL 187

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                 ++H T +P          + GC+R+    D+
Sbjct: 188 DIPGGYFIHGTNKPDGVGM---QVSHGCIRLF-PEDI 220


>gi|258645663|ref|ZP_05733132.1| putative cell wall lytic activity [Dialister invisus DSM 15470]
 gi|260403030|gb|EEW96577.1| putative cell wall lytic activity [Dialister invisus DSM 15470]
          Length = 429

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 18/157 (11%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDI----- 67
           L L M  S+  + +H  +    +    + +V   +     D       +   S+      
Sbjct: 13  LWLCMVGSVSAEILHMGMRGAAVESLQNDLVEAGYLARTVDGDYGSTTVKAVSEFQKDHG 72

Query: 68  -PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
            P+  K     T+  +        R G   +  +    GN    +  L++RL  +G L  
Sbjct: 73  LPVTGKAD-DSTQAKLKEDDGKGYRDGGGIVYAQ----GNRGDMIAELQDRLAAAGYL-- 125

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +      +     +AVK FQ  H L  SG VD  TL 
Sbjct: 126 TGASDGIYGGDTAAAVKQFQKDHRLPVSGAVDEQTLS 162



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    ++ L+ +L  +G LD        +    ESAV+  Q  HGL  +G VD +T +
Sbjct: 195 GDRGSEIKTLQNKLRRAGYLDGEA--DGIYGNDTESAVRALQEEHGLSVTGNVDDATWK 251



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +    LH+G    +V+ L+  L+ +G L     +   + +    AV  FQ  HGL  +
Sbjct: 19  GSVSAEILHMGMRGAAVESLQNDLVEAGYLAR--TVDGDYGSTTVKAVSEFQKDHGLPVT 76

Query: 155 GMVDSSTLEAMNVP 168
           G  D ST   +   
Sbjct: 77  GKADDSTQAKLKED 90



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 9/89 (10%)

Query: 89  LSRGGWPEL-------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +    W  L           L  G+    V +L+ RL++ G      G    + A    A
Sbjct: 245 VDDATWKLLGGLSAPSAGGTLKAGDRGKRVVKLQNRLLLHGY--NPGGSDGIYGAATAEA 302

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V+  Q    L+ +GM D++  E +     
Sbjct: 303 VRKLQAEEKLERTGMADTNVWERLENAPK 331


>gi|159028466|emb|CAO89913.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 54/172 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++++ +    +   ++ KV  +  V VG+   +TP     +  ++ NP W  P      
Sbjct: 44  THLVLKLKERKVYVYQDSKVLAQFAVAVGKKGWETPTGKFEVRELVRNPVWKSP------ 97

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                     +V                    PG  + +    I
Sbjct: 98  -----------------------WTGKVS------------------APGPNSPLGERWI 116

Query: 314 EFYS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            F+S  +N+   H TP         R  + GCVR+RN  +  L   +   TP
Sbjct: 117 GFWSDGKNSIGFHGTPAENSLG---RAASHGCVRMRNRDVKVLFDLVRMGTP 165


>gi|126658355|ref|ZP_01729504.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
 gi|126620287|gb|EAZ91007.1| hypothetical protein CY0110_27385 [Cyanothece sp. CCY0110]
          Length = 191

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 61/215 (28%), Gaps = 60/215 (27%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNL---MRIKKLLEQKMGLRYVLV--NIPAASL 205
           L   G ++   + +   P      +L V L          E+ +      V  N+    +
Sbjct: 19  LPIEG-INKQAIASEGTPPATPSTELPVTLPLEEAAIVTPEETIETLATRVVLNLKERKV 77

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
              ++ +V     V +G+   +TP     + +++ +P W  P                  
Sbjct: 78  YVYQDDQVIANYPVAIGKPGWETPRGEFSVIQMVEDPQWKNP------------------ 119

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM-- 323
                          V                     G  + +    I F+     Y+  
Sbjct: 120 -----------WNGRVS------------------AAGPNSPLGERWIGFWREGGKYIGF 150

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           H TP   +        + GCVR+RN  +  L   +
Sbjct: 151 HGTPGEHVMGQ---AVSHGCVRMRNQDVKALYELV 182


>gi|120553059|ref|YP_957410.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
 gi|120322908|gb|ABM17223.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
          Length = 349

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 45/211 (21%)

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           + L R+  L    +    +++N+    L             V VG  +  +P+ ++++  
Sbjct: 100 ITLPRMYVLP--DVEREGIVINLAEYRLYYFTPDGGVQVYPVGVGTEENPSPLTNAKVTM 157

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
            + +P W  P SI  +                                            
Sbjct: 158 PLESPAWYPPASIRAE-----------------------------------YEASGDYLP 182

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
               PG  N + +  +    +    +H T +   F   +   + GC R+ N  D+  ++ 
Sbjct: 183 KMIPPGPGNPLGTHALMLSEK-GYLIHGTNKQ--FGVGM-PVSHGCFRMYN-EDISRFVY 237

Query: 358 KDTPTWSRYHIEEVVK---TRKTTPVKLATE 385
           +         I E VK   +     +++   
Sbjct: 238 QVEKGTPVQVIREPVKIGMSGGEVWLEVHRP 268


>gi|119946260|ref|YP_943940.1| peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein
           [Psychromonas ingrahamii 37]
 gi|119864864|gb|ABM04341.1| Peptidoglycan-binding LysM:ErfK/YbiS/YcfS/YnhG protein
           [Psychromonas ingrahamii 37]
          Length = 322

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 67/218 (30%), Gaps = 52/218 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+P   L     GK  +    + +GR+ R TP + + +   + +P W    
Sbjct: 110 DVSHKGIVINLPELRLYYFPKGKQEVHIFPIGIGRIGRSTPTMETTVRMKIKHPSWTPTT 169

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
               +                                         +       GK N +
Sbjct: 170 QSRAEHF----------------------------------QATGKHLPSVVKAGKDNPL 195

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               ++    N  Y +H T +   F   +R  ++GC+R+ N  D+  WL +   T     
Sbjct: 196 GDYALQLAYGNYEYLIHGTNKD--FGIGMR-VSAGCIRL-NPDDI-SWLFQQVSTNESVR 250

Query: 368 IEEV---VKTRKTTPVKLATEVPV--------HFVYIS 394
           I      + +       L    P+          +Y +
Sbjct: 251 IINQPIKIASEPNGQKMLEVHSPISRSDDDTEFSLYWT 288


>gi|37526507|ref|NP_929851.1| hypothetical protein plu2616 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785938|emb|CAE14990.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 360

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               + +++N+    L     GK   +   + +G++ R TP++ + +++++ +P W   +
Sbjct: 92  DTPRQGIVINLAELRLYYFPKGKNNVIVYPIGIGQLGRNTPVMTTSVSQLIKDPTWTPTK 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                     + +          G  N M
Sbjct: 152 NIRKH-----------------------------------YAEQGVILPAVVPAGPENPM 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
            +  +   +    Y +H T     F   +R  +SGC+R+R   D+   L    P  +R  
Sbjct: 177 GAFALRLAAGRGEYLIHGTNAD--FGIGMR-VSSGCIRLR-PDDI-ETLFNAVPRGTRVQ 231

Query: 368 I 368
           I
Sbjct: 232 I 232


>gi|83643225|ref|YP_431660.1| hypothetical protein HCH_00323 [Hahella chejuensis KCTC 2396]
 gi|83631268|gb|ABC27235.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 315

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 41/169 (24%)

Query: 196 VLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +L+N+    L   +  K  L    + +G VD  TPI+ ++I   M NP W  P SI Q+ 
Sbjct: 99  ILINLAEYRLYYFQPDKKRLYTVPIGIGTVDFPTPIMDTKIVTRMKNPTWYPPESIRQRQ 158

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           +                                               G  N + +   +
Sbjct: 159 L----------------------------------DEYGEQLPRAVPAGPDNPLGAYAFK 184

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               ++  +H T +       +R  + GC+R+ N     +   +  +TP
Sbjct: 185 L-DADSYLIHGTNK--GVGIGMR-VSHGCIRLYNWDIKQMMSMVPDNTP 229


>gi|225849285|ref|YP_002729449.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643963|gb|ACN99013.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 460

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 46/196 (23%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIP-AASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + + V   RI  +     G  Y+ +N         +E+    +   + +G  + Q+P+  
Sbjct: 256 QIIIVPFRRILPIKNFSYGTIYININEKRLYYPVLIEDKSYIITFPIGIGADEAQSPVGD 315

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
            +I +   NP W  P SI ++                                       
Sbjct: 316 FKITQKRKNPAWYPPESIRKEQ-------------------------------------- 337

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNII 350
            P+      PG  N + +  +   +  +  MH T +           + GC+R+   ++ 
Sbjct: 338 -PDLPPVFPPGPDNPLGTRAMRLGNT-SFLMHGTNKEYGIGMK---VSHGCIRMYNEDVE 392

Query: 351 DLDVWLLKDTPTWSRY 366
            L   +   TP  SR 
Sbjct: 393 KLFEVVDVGTPVVSRD 408


>gi|116626900|ref|YP_829056.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230062|gb|ABJ88771.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 182

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 53/188 (28%), Gaps = 55/188 (29%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
           +     R ++V+IP   L  +E+ +V       VG     +P     I   + +P W   
Sbjct: 30  QNTRPARRIVVSIPDRKLAVMEDDRVLRVFETAVGAPKSPSPTGTYTIINSIADPTWYTK 89

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
             I+                                                  PGK N 
Sbjct: 90  GKIV-------------------------------------------------PPGKCNP 100

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSR 365
           + +  +    +    +H T  P       R  + GC+R+RN  + +L   +        R
Sbjct: 101 LGTRWLGLSVK-GYGIHGTNVPSSIG---RNASHGCIRMRNRDVEELFKMVAVGDQVELR 156

Query: 366 YHIEEVVK 373
              +  V 
Sbjct: 157 GERDAEVA 164


>gi|197285269|ref|YP_002151141.1| peptidoglycan-binding protein [Proteus mirabilis HI4320]
 gi|194682756|emb|CAR42976.1| putative peptidoglycan-binding protein [Proteus mirabilis HI4320]
          Length = 305

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 56/225 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + +++++ +P W    +I +  
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSVSQLIKDPTWTPTANIRKN- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +          G  N M +  + 
Sbjct: 157 ----------------------------------YAAKGITLPAVVPAGPDNPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKD---TPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+R  +I  L   + K             
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRLRPDDIETLFNVVPKGSRVQVINKPIKF 239

Query: 369 EEVVKTRKTTPV--KL-------ATEVPVHFV-YISAWSPKDSII 403
            E    ++   V   L          +P+ F    +AW  +   +
Sbjct: 240 TETADGKQFIEVHQPLSQNEDDDPQTMPLTFTKQFTAWY-ESGKV 283


>gi|325981388|ref|YP_004293790.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325530907|gb|ADZ25628.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 331

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 70/209 (33%), Gaps = 58/209 (27%)

Query: 173 IRQLQVNLMRIKKLLEQ----KMGLRYVLV---------NIPAASLEAV---ENGK--VG 214
           I  L  N    + L E      +  RY++          N+P   +      + G+    
Sbjct: 64  IEILLANPNVDRWLPEDGVTVTLPSRYIIPQAERKGLVLNLPEMRIYYFPEPKKGEKPTV 123

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
               V +GR+D  TP+  SRI     +P W+ P+S+    +                   
Sbjct: 124 TTHPVGIGRMDWVTPLGISRIIEKKKDPTWIPPKSLQMDRI------------------- 164

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFN 333
                          +   P +     PG  N +    +     + +Y +H T +P  F 
Sbjct: 165 ---------------ANGEPPYPSIVPPGPTNPLGRHAMRLSIGSGSYLIHGTIKP--FG 207

Query: 334 NVVRFETSGCVRV--RNIIDLDVWLLKDT 360
             +R  ++GCVR+   +I  L   +   T
Sbjct: 208 VGMR-VSAGCVRMYPEDIEALFDKVPVGT 235


>gi|269139201|ref|YP_003295902.1| hypothetical protein ETAE_1854 [Edwardsiella tarda EIB202]
 gi|267984862|gb|ACY84691.1| hypothetical protein ETAE_1854 [Edwardsiella tarda EIB202]
          Length = 374

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+  +    + +G++ R TP + +R+++ + +P W    
Sbjct: 94  DTPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       +  +       G  N M
Sbjct: 154 NIRRH-----------------------------------YQAQGISLPAVMPAGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   ++   Y +H T     F   +R  +SGC+R+R   D+   L +  P  +R  
Sbjct: 179 GRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRLR-PGDI-EALFRSVPGGTRVQ 233

Query: 368 IEEV 371
           I   
Sbjct: 234 IVNQ 237


>gi|227355699|ref|ZP_03840092.1| ErfK/YbiS/YcfS/YnhG family protein [Proteus mirabilis ATCC 29906]
 gi|227164018|gb|EEI48915.1| ErfK/YbiS/YcfS/YnhG family protein [Proteus mirabilis ATCC 29906]
          Length = 305

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 56/225 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + +++++ +P W    +I +  
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSVSQLIKDPTWTPTANIRKN- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +          G  N M +  + 
Sbjct: 157 ----------------------------------YAAKGITLPAVVPAGPDNPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKD---TPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+R  +I  L   + K             
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRLRPDDIETLFNVVPKGSRVQVINKPIKF 239

Query: 369 EEVVKTRKTTPV--KL-------ATEVPVHFV-YISAWSPKDSII 403
            E    ++   V   L          +P+ F    +AW  +   +
Sbjct: 240 TETADGKQFIEVHQPLSQNEDDDPQTMPLTFTKQFTAWY-ESGKV 283


>gi|220910238|ref|YP_002485549.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
 gi|219866849|gb|ACL47188.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
          Length = 217

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 52/184 (28%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            Q +    +++++    +   +         V +GR   +TP+   ++ +++ NP W  P
Sbjct: 84  PQVVAPLRLVISLSRRRVTVFQGSTALKSYPVAIGRPGWETPVGKFQVKQLIRNPTWKHP 143

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                                                               +     N 
Sbjct: 144 ----------------------------------------------FKGDIIKGGHPDNP 157

Query: 308 MASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           +    I F+   +N   MH TP P       R  + GCVR+ N  D+     K       
Sbjct: 158 LGKFWIGFWTDGKNWVGMHGTPNPESVG---RAASHGCVRMYN-KDIAELFAKVQLGTPV 213

Query: 366 YHIE 369
             ++
Sbjct: 214 TVVK 217


>gi|304559115|gb|ADM41779.1| hypothetical protein ETAF_1671 [Edwardsiella tarda FL6-60]
          Length = 346

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 61/184 (33%), Gaps = 42/184 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 +++N+    L     G+  +    + +G++ R TP + +R+++ + +P W    
Sbjct: 66  DTPREGIVINLAELRLFYYPPGENRVEVYPIGIGQLGRNTPEMVTRVSQHIKDPTWTPTA 125

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I +                                       +  +       G  N M
Sbjct: 126 NIRRH-----------------------------------YQAQGISLPAVMPAGPDNPM 150

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +   ++   Y +H T     F   +R  +SGC+R+R   D+   L +  P  +R  
Sbjct: 151 GRFALRLAAQGGVYLIHGTNAD--FGIGMR-VSSGCIRLR-PGDI-EALFRSVPGGTRVQ 205

Query: 368 IEEV 371
           I   
Sbjct: 206 IVNQ 209


>gi|254430643|ref|ZP_05044346.1| protein ErfK/srfK [Cyanobium sp. PCC 7001]
 gi|197625096|gb|EDY37655.1| protein ErfK/srfK [Cyanobium sp. PCC 7001]
          Length = 172

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 57/194 (29%), Gaps = 70/194 (36%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G R V+++     +  +E G+   R  V VGR   +TP+    +  ++ +P W  P
Sbjct: 24  PAVPGSREVVLDRRQRHVRVLEGGRELRRFPVAVGRPGWETPVGRFAVIELVRDPVWEHP 83

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            +                            G++V                    PG  N 
Sbjct: 84  AT----------------------------GQKV-------------------PPGPSNP 96

Query: 308 MASTKIEFY---------SRNNT---------YMHDTPEPILFNNVVRFETSGCVRV--R 347
           + S  I F+         +  N            H TP            + GCVR+   
Sbjct: 97  LGSRWIGFHRDCRGRRGFNGRNYLVVEGCVSAGFHGTPNRESVGQ---AVSHGCVRLFDE 153

Query: 348 NIIDLDVWLLKDTP 361
           +  +L   +   TP
Sbjct: 154 HARELFELVRIGTP 167


>gi|75907183|ref|YP_321479.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75700908|gb|ABA20584.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 575

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 28/209 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+ S  V  L+E+L   G       ++  FD   ++AV  FQ  + L   G+V
Sbjct: 136 SKSSLKRGDISDRVMSLQEKLQADGYY--QGAITGNFDTATQAAVIQFQQANRLVADGIV 193

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T   +          L         L EQ    +  +   P                
Sbjct: 194 GPKTSSVLASSTRKLAASLPQKTTLEPFLTEQPQKPQNQVKIAPQ--------------- 238

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
                      P    ++  I      + P+S++         Q+  Y  ++ I + D  
Sbjct: 239 -------SAAPPSPSQKMRLIKTISGKISPKSVVYSGNGLFFAQNMMY--NHTITVYDRN 289

Query: 278 GK--EVFVEEVDWNSPEPPNFIFRQDPGK 304
            +  +V  +EVD +      F  +     
Sbjct: 290 YELVKVIPDEVDLSKYGHSRFKGKYRGAP 318



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L  G+ +  V  L+++L  SG    +      F +  E+AVK FQ  +GL  
Sbjct: 48  WCLPAAAALKKGHRNPQVASLQQKLRASGYFSQAAT--GYFGSVTEAAVKRFQEANGLKA 105

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQV 178
            G+V ++TL A+   + +    +  
Sbjct: 106 DGIVGAATLAALESTMGVSESSITT 130


>gi|261343983|ref|ZP_05971628.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rustigianii DSM
           4541]
 gi|282568374|gb|EFB73909.1| ErfK/YbiS/YcfS/YnhG family protein [Providencia rustigianii DSM
           4541]
          Length = 349

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 42/179 (23%)

Query: 192 GLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
               V++N+    L     N K  +   + +G++ R TP + + I++++ +P W    +I
Sbjct: 94  PRTGVVINLAELRLYYFPANSKKVIVYPIGIGQLGRDTPEMVTSISQLIKDPTWTPTTNI 153

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
            +                                     + +          G  N M  
Sbjct: 154 RKH-----------------------------------YAKQGITLPAVVPAGPENPMGL 178

Query: 311 TKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +        Y +H T     F   +R  +SGC+R+R   D+   L K  P  +R  +
Sbjct: 179 YALRLSYGKGEYLIHGTNAD--FGIGMR-VSSGCIRLR-PHDI-EALFKSVPKGTRVQV 232


>gi|291532676|emb|CBL05789.1| Uncharacterized protein conserved in bacteria [Megamonas
           hypermegale ART12/1]
          Length = 395

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 64/224 (28%), Gaps = 81/224 (36%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++L+NIPA SL   +N K      V VG+++ +TP+   ++   + NP W         
Sbjct: 52  RWILINIPARSLRLYDNDKCIEMYPVGVGKIETKTPVGFYKVVEKIVNPTWT-------- 103

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                 +P +       G+ N +    I
Sbjct: 104 --------------------------------------DPADVSVVIPSGEDNPLGYRWI 125

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                     H T  P    +   + ++GCVR+                     + + V 
Sbjct: 126 GIGGNYGI--HGTNRPDSVGH---YVSNGCVRMVEA--------------DVEKVFDKVD 166

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPK--DSIIQFRDDIY--GLD 413
                         V  +Y      K  D  + +   IY  G D
Sbjct: 167 VGTE----------VQIIYNRLVIDKTFDGRVAYY--IYPDGYD 198


>gi|154705804|ref|YP_001423831.1| hypothetical protein CBUD_0411 [Coxiella burnetii Dugway 5J108-111]
 gi|154355090|gb|ABS76552.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
          Length = 314

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 54/175 (30%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    +++N+ A  L     GK       V +GR +  TP+    I + + NP WV+P 
Sbjct: 90  PVPKEGIVINLAAMRLYYFPKGKNYFYTYPVGIGRFNWSTPLGKLHIIQKIKNPVWVVPD 149

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           S+++                                                  G  N +
Sbjct: 150 SVLRYR-----------------------------------QENGDPVPKMMPSGPENPL 174

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H T +P       R  ++GC+ +   +I  L   +  DTP
Sbjct: 175 GYYALRLSQP-TYLIHGTNDPSSVG---RRSSAGCIHLYPEDIKALFGMVSVDTP 225


>gi|300863730|ref|ZP_07108662.1| ErfK/YbiS/YcfS/YnhG-like protein [Oscillatoria sp. PCC 6506]
 gi|300338298|emb|CBN53808.1| ErfK/YbiS/YcfS/YnhG-like protein [Oscillatoria sp. PCC 6506]
          Length = 213

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 54/160 (33%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                 ++     V VG+   +TP  + ++ +++  P W  P +                
Sbjct: 99  YVYRKNELQTSFPVAVGKDGWETPTGNFKVMQMIREPSWEHPWT---------------- 142

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTYM 323
                       G+ V                    PG  N + S  I F+   +N    
Sbjct: 143 ------------GEVV-------------------PPGPDNPLGSRWIGFWTDGKNVIGF 171

Query: 324 HDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           H TP P       R  + GCVR+  ++   L   +   TP
Sbjct: 172 HGTPNPESIG---RPASHGCVRMYDKDAQALFEKVEVGTP 208


>gi|258516740|ref|YP_003192962.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780445|gb|ACV64339.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 309

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 57/246 (23%), Gaps = 77/246 (31%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  VQ L+E+L+  G       +   F      AV+  Q +HG+   G+V+ +   
Sbjct: 44  PNMKGKDVQELQEQLMDLGLY--EDKIDGVFGPSTAQAVQALQEKHGVKTDGIVNVTIWA 101

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +                                                       V +
Sbjct: 102 MLLS------------------------------------------------EHGATVTQ 113

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            +   P     I     N    +               +  Y        +   GK    
Sbjct: 114 KESPPPQGKPSIVVDTVNRTLTV------------FIDNEPY--RQYYVAV---GKPETP 156

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNT-YMHDTPEPILFNNVVRFETSG 342
             +   +        R+         +  I          +H T +P        +E+ G
Sbjct: 157 TPIGSWTV------VRKAMNWGTGFGTRWIGLNVPWGIFGIHGTNKPYSIG---GYESHG 207

Query: 343 CVRVRN 348
           C+R+ N
Sbjct: 208 CIRMHN 213



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG     V  ++  L   G       ++  F+  ++ A++  +    L     VD   
Sbjct: 246 LSLGERGSDVAEVQRILKKRGYYK--GDINGLFNKEIKEAIEKLRKDKRLLHDDRVDLEI 303

Query: 162 LEAMN 166
            +A+ 
Sbjct: 304 YQALG 308


>gi|121996923|ref|YP_001001710.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
 gi|121588328|gb|ABM60908.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
          Length = 355

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 67/238 (28%), Gaps = 67/238 (28%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD--LRIRQLQVNLMRIK--------KLLE 188
           + A+  F++  G+D   +V                  ++  V   +I+         L  
Sbjct: 62  DRALHRFELAEGVD---VVGEEQTAEAGADDTLLDVAKRYAVGYEQIRMANPGVDTWLPG 118

Query: 189 Q-------------KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSR 234
           +                   V++N+    L    E+  V     V +GR+D  TP+  + 
Sbjct: 119 EGAEIRIPSRYILPDAPREGVVINLAEMRLYHYPEDENVVEVFPVSIGRMDWSTPLGRTE 178

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +   + +P W  P SI ++                                         
Sbjct: 179 VTGKIQDPAWYPPESIRKQ-----------------------------------AEQRGE 203

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                  PG  N +    I         +H T  P      +R  T GC+R+    D+
Sbjct: 204 TMPREVPPGPDNPLGRHAILLDIS-GYLLHGTNRPW--GIGMRA-THGCIRLH-PRDI 256


>gi|119477591|ref|ZP_01617741.1| hypothetical protein GP2143_09020 [marine gamma proteobacterium
           HTCC2143]
 gi|119449094|gb|EAW30334.1| hypothetical protein GP2143_09020 [marine gamma proteobacterium
           HTCC2143]
          Length = 318

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 81/262 (30%), Gaps = 62/262 (23%)

Query: 135 DAYVESAVKLFQMRHGL--DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           D  +      +Q+ + +    +  VD         PV L I  +  N  R          
Sbjct: 48  DDTLVDLAARYQLGYNVIRSANPAVDPWLPGEG-TPVVLPINVILPNAER---------- 96

Query: 193 LRYVLVNIPAASLEAVENGKVG-----LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
              +++N+P   L A  +             + VGR D  TPI  +R+     NP W  P
Sbjct: 97  -EGIIINVPEMRLYAYASNGPNPSSRVTVHPISVGRGDWTTPITKTRVTGRAENPDWYPP 155

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
           +SI                                    D ++        +   G  N 
Sbjct: 156 KSIR-----------------------------------DEHAARGDTLPTKVSAGPDNP 180

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +    +      + ++H T +P  F   +   T GC+R+    D++  + +         
Sbjct: 181 LGRFLLMLDIP-SYFIHGTNKP--FGIGM-QVTHGCIRMY-PDDIEQLVKQTRNNTPVTI 235

Query: 368 IEEVVKTR---KTTPVKLATEV 386
           + +  KT    +   V++   +
Sbjct: 236 VNQTFKTGWFEQQLYVEVHQPL 257


>gi|300722818|ref|YP_003712110.1| hypothetical protein XNC1_1866 [Xenorhabdus nematophila ATCC 19061]
 gi|297629327|emb|CBJ89926.1| putative enzyme with LysM domain [Xenorhabdus nematophila ATCC
           19061]
          Length = 318

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 43/202 (21%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               + +++N+    L     G    +   + +G++ R TP + + +++++ +P W  P 
Sbjct: 97  DTPRQGIIINLAELRLYYYPKGANHVIVYPIGIGQLGRNTPTMTTSVSQLIGSPTWT-PT 155

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + I+KD                                   +           PG  N M
Sbjct: 156 ANIRKD----------------------------------YASRGIILPAVIPPGPDNPM 181

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWL-LKDTPTWS 364
               +   +    Y +H T     F   +R  +SGC+R+R  +I DL   + LK      
Sbjct: 182 GDFALRLAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRLRPDDIRDLFSTVPLKTRVQVI 238

Query: 365 RYHIEEVVKTRKTTPVKLATEV 386
              I+  V+      V++   +
Sbjct: 239 NEPIKYSVEPDGKRYVEVHQPL 260


>gi|251789311|ref|YP_003004032.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
 gi|247537932|gb|ACT06553.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 333

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     GK   +   + +G++ R TP++ + +     NP W+   
Sbjct: 94  DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPNPTWIPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +  +                                       +          G  N M
Sbjct: 154 NTRRH-----------------------------------YKEQGITLPAVVPGGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T     F   +R  +SGC+R+R   D+   L  D P  +R  
Sbjct: 179 GLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRLR-PEDI-EALFNDVPVGTRVQ 233

Query: 368 I 368
           I
Sbjct: 234 I 234


>gi|218678683|ref|ZP_03526580.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli CIAT 894]
          Length = 209

 Score = 83.2 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 54/207 (26%), Gaps = 33/207 (15%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
                E         + +                 + NP       + + +      Q  
Sbjct: 12  YTSVAEKLSERFHMGIDLVNALNPASQFSPGDTVWVVNPGVARQGKVKRIEADRKAGQVL 71

Query: 264 QYLKDNNIHMIDEK--GKEVFVEEVDWNSPEP----------PNFIFRQ---------DP 302
            Y  D  +  +     G +        +  +           P   F+Q           
Sbjct: 72  AYAGDGALLAVYPATIGSQDNPAPSGKHKVKGVAKMPVYRYDPKLNFKQGKNDRVLTIPK 131

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           G    + +  I+        +H TPEP L + V    + GCVR+ N    +L   +    
Sbjct: 132 GPNGPVGTVWIDLTEP-TYGIHGTPEPKLIDKVG---SHGCVRLTNWDAEELAGMV---K 184

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVP 387
           P      +       +   ++L   +P
Sbjct: 185 PGVLVDFVNRSAAAPE---IRLRLVLP 208


>gi|332711897|ref|ZP_08431827.1| hypothetical protein LYNGBM3L_69260 [Lyngbya majuscula 3L]
 gi|332349225|gb|EGJ28835.1| hypothetical protein LYNGBM3L_69260 [Lyngbya majuscula 3L]
          Length = 209

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 53/180 (29%), Gaps = 54/180 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           +  +   +  +++ +    +   +  +V     + +G+   +TP  +  + + + +P W 
Sbjct: 75  IPAEATQITRLVIKLSERRVYVYQAAQVLNSYPIAIGKAGWETPTGNFEVIQKLQDPAWE 134

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P                                        W             PG  
Sbjct: 135 HP----------------------------------------WTGE-------VIPPGPN 147

Query: 306 NAMASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           N +    I F+   +N    H T    L        + GC+R+  +++ DL   +   TP
Sbjct: 148 NPLGDRWIGFWTNGKNYIGFHGTTAEELVGQ---AVSHGCIRMLNKDVRDLFEKVAIGTP 204


>gi|296133608|ref|YP_003640855.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296032186|gb|ADG82954.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 318

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 74/256 (28%), Gaps = 76/256 (29%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V   ++ L   G       L   +     +AVK FQ  + L  +G ++ +TL  + 
Sbjct: 55  SGSEVMDFQQALQYLGFY--RGKLDGVYGLQTYNAVKKFQRSNKLPVNGSINVATLRVLK 112

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
              DL +          K   +   G   + V+I   +L   ++ KV     V VG+   
Sbjct: 113 KYFDLPLAT--------KTRTKGPKGEVRLEVHIKTRTLIVYDDDKVFKTYRVAVGKNKT 164

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            TP+   RI R   N  W                                 G       V
Sbjct: 165 PTPVGEWRIVRKAKN--WG-----------------------------TGFGTRWLGLSV 193

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
            W                        I   ++          P    +     + GC+R+
Sbjct: 194 PW--------------------GLFGIHGTNK----------PWSIGSK---ASHGCIRM 220

Query: 347 --RNIIDLDVWLLKDT 360
             R++ +L  W+   T
Sbjct: 221 FNRDVEELYEWVKLGT 236



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V +++++L   G L  +      +     +AVK FQ  H    +G VD  
Sbjct: 254 VLRRGYKGSDVYQVQQKLRELGYLKSTP--DGIYGPATIAAVKKFQKDHDFPVTGEVDID 311

Query: 161 TLEAMN 166
              A+ 
Sbjct: 312 IYPAIG 317


>gi|145298314|ref|YP_001141155.1| hypothetical protein ASA_1301 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851086|gb|ABO89407.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 305

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 73/214 (34%), Gaps = 47/214 (21%)

Query: 157 VDSST------LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   T      L   N  VD  + +    L    ++L   +    +++N+P   L     
Sbjct: 53  IGKHTQIGFLALLEANPGVDPYLPKPGTRLTLPTQMLLPDVPREGIVINLPELRLYYFPK 112

Query: 211 GK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           GK   +   + +G + R+TP + + +     NP W +P  +++K                
Sbjct: 113 GKNEVIVLPIGIGDIGRETPEMITTVIAKNPNPTW-VPGPMVRK---------------- 155

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-RNNTYMHDTPE 328
                             W   +  +      PG  N +    +     + +  +H T +
Sbjct: 156 -----------------SWLEQKGISLPAVVPPGPDNPLGKFAMRLGYGKRDYLIHGTNK 198

Query: 329 PILFNNVVRFETSGCVRVR--NIIDLDVWLLKDT 360
              F   +R  ++GC+R+R  +I  L   +   T
Sbjct: 199 E--FGVGLR-VSAGCIRLRPDDIEALFKLVPVGT 229


>gi|225851535|ref|YP_002731769.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1]
 gi|225644873|gb|ACO03059.1| ErfK/YbiS/YcfS/YnhG family protein [Persephonella marina EX-H1]
          Length = 427

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 48/185 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           R + L E++     + +N+    L     +++    +   V +G  + ++PI    I+  
Sbjct: 224 RKRLLPEKEFNFGEIYLNLSEKRLYYPVIIDDDPYVISIPVGIGTDENRSPIGDFFISEK 283

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
             NP W +P +I ++D                                       P+   
Sbjct: 284 RKNPAWYVPDNIKEED---------------------------------------PSLPD 304

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
              PG  N + +  +   +     +H T +   F   ++  + GC+R+   ++  L   +
Sbjct: 305 IVPPGPNNPLGTRAMRLSNT-TYLLHGTSKR--FGIGMK-VSHGCIRMYNEDVEALFDLV 360

Query: 357 LKDTP 361
              T 
Sbjct: 361 ETGTK 365


>gi|157370425|ref|YP_001478414.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
 gi|157322189|gb|ABV41286.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
          Length = 337

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W    
Sbjct: 94  DTKREGIVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLQVTSVSQKIPNPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I ++           YL+                                   G  N M
Sbjct: 154 NIRKR-----------YLEK------------------------GVKLPGVVPAGPENPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDT 360
               +     +  Y +H T     F   +R  +SGC+R+R  +I  L   + + T
Sbjct: 179 GLFAMRLAMGHGEYLIHGTNA--NFGIGMR-VSSGCIRLRPTDIEALFNMVPRGT 230


>gi|290475508|ref|YP_003468396.1| LysM domain-containing protein [Xenorhabdus bovienii SS-2004]
 gi|289174829|emb|CBJ81630.1| putative enzyme with LysM domain [Xenorhabdus bovienii SS-2004]
          Length = 356

 Score = 83.2 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 47/198 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L     GK  +    + +G+++R TP + + +++++ NP W  P + I+KD
Sbjct: 103 IIINLAEFRLYYFPKGKNYVVVYPIGIGQLERDTPTMTTSVSQLIKNPTWT-PTTNIRKD 161

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              +            G  N M    + 
Sbjct: 162 ----------------------------------YASRGIILPTVVPAGADNPMGDFALR 187

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
             +    Y +H T     F   +R  +SGC+R+R   D++              I E +K
Sbjct: 188 LAAGRGEYLIHGTNAN--FGIGMR-VSSGCIRLR-PDDIENLFYSVPRGTRVQVINEPIK 243

Query: 374 -----TRKTTPVKLATEV 386
                T K   V++   +
Sbjct: 244 YTVEPTGK-RYVEIHQPL 260


>gi|271500201|ref|YP_003333226.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270343756|gb|ACZ76521.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 334

 Score = 83.2 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     GK   +   + +G++ R TP++ + +     NP W+   
Sbjct: 94  DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPNPTWIPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +  +                                       +  +       G  N M
Sbjct: 154 NTRRH-----------------------------------YKEQGIDLPAMVPGGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T     F   +R  +SGC+R+R   D+   L  D P  +R  
Sbjct: 179 GLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRLR-PEDI-EALFNDVPVGTRVQ 233

Query: 368 I 368
           I
Sbjct: 234 I 234


>gi|218441711|ref|YP_002380040.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424]
 gi|218174439|gb|ACK73172.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7424]
          Length = 217

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 40/151 (26%), Gaps = 52/151 (34%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +   +  +      V VG+   +TP     + +++ NP W  P              
Sbjct: 99  ERRVYVYQGDQEIGNYPVAVGKKGWETPTGDFAVMQMIVNPSWQNPW------------- 145

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRN 319
                           G+ V                     G  N +    I F+   +N
Sbjct: 146 ---------------NGRIV-------------------PAGPKNPLGERWIGFWTDGKN 171

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
               H T    L        + GCVR+RN  
Sbjct: 172 FIGFHGTAAEHLIGQ---AVSHGCVRMRNSD 199


>gi|113475771|ref|YP_721832.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
 gi|110166819|gb|ABG51359.1| ErfK/YbiS/YcfS/YnhG [Trichodesmium erythraeum IMS101]
          Length = 216

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 55/215 (25%), Gaps = 89/215 (41%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             ++ A+K FQ   G+                  +  +R +     R             
Sbjct: 69  PKLDQAIKDFQKYLGIK----------------AEELVRVVLRIGER------------- 99

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
                    +   E  K      V VG+   +TP  + ++ +++ NP W  P        
Sbjct: 100 --------RVYVYEGEKEVASYPVAVGKPGWETPKGNFKVIQMVENPKWQNP-------- 143

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                           W              G   A+    I F
Sbjct: 144 --------------------------------WTGE-------VMPAGPNTALGLRWIGF 164

Query: 316 Y--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +   +++   H TP      +     + GCVR+ N
Sbjct: 165 WTDGKDSIGFHGTPTVGSIGS---AASHGCVRMYN 196


>gi|332711580|ref|ZP_08431511.1| hypothetical protein LYNGBM3L_66650 [Lyngbya majuscula 3L]
 gi|332349558|gb|EGJ29167.1| hypothetical protein LYNGBM3L_66650 [Lyngbya majuscula 3L]
          Length = 241

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 54/172 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             V+V++   ++      ++     V +G+    TP    +I R   NP W  P   I  
Sbjct: 115 YQVVVDLSDTTVYLYWGEQLLQSHPVAIGKPGWDTPTGSFKIIRKQPNPIWKEP---ITG 171

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +++                                             PG  N +    I
Sbjct: 172 ELIP--------------------------------------------PGPDNPLGERWI 187

Query: 314 EFYSR--NNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            F+S   +   +H T E  L        + GC+R+  ++I  L   +   TP
Sbjct: 188 GFWSDGHHQIGLHGTDEEELIGK---AVSHGCLRMLNQDIKQLYEQVSLGTP 236


>gi|325983405|ref|YP_004295807.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325532924|gb|ADZ27645.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 392

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 52/169 (30%), Gaps = 45/169 (26%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKV-----GLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
               + +++N+ A  L      K       +   V +GRV+ +TP   +RI     NP W
Sbjct: 123 DAPRQGIVINLAAMRLFYFPQTKPGEPQRVITHPVGIGRVEWKTPEGMTRITAKNKNPSW 182

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
           +   SI ++                                   ++           PG 
Sbjct: 183 IPTPSIRKE-----------------------------------HAKNGNPLPAIVPPGP 207

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
            N M +  +      +  +H T +P          + GCVR+    D+ 
Sbjct: 208 DNPMGAHVLRLAWP-SYAIHGTDKPPSIG---LRGSHGCVRMY-PEDIA 251


>gi|311696715|gb|ADP99588.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15]
          Length = 348

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 81/279 (29%), Gaps = 57/279 (20%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P  P    + S  V        + GDL    G+         +A+      + L    + 
Sbjct: 32  PESPEEP-DRSPRVPTF----PVQGDLAGELGVFETRYEDTFAAI-----GNRLAMGYL- 80

Query: 158 DSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
               ++A   V   L      + L R   L + +     +++N+    L    +  V   
Sbjct: 81  --ELVKANPGVDPWLPGDGTTITLPRQYVLPDARREG--IVINLAEYRLYYFTDEGVQ-V 135

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             V VG  +  +P+  + +   + +P W  P SI  +                       
Sbjct: 136 YPVGVGTAENPSPLTDAEVTMPLESPAWYPPASIRAE----------------------- 172

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                                    PG  N + +  +    +    +H T +   F   +
Sbjct: 173 ------------YEASGDYLPRMIPPGPGNPLGTHALLLSEK-GYLIHGTNKK--FGVGM 217

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
              + GC R+ N  D+  ++ +         + + VK  
Sbjct: 218 -PVSHGCFRMYN-EDISRFVYQVEKGTPVQVVHDAVKIG 254


>gi|307131455|ref|YP_003883471.1| hypothetical protein Dda3937_03663 [Dickeya dadantii 3937]
 gi|306528984|gb|ADM98914.1| hypothetical protein Dda3937_03663 [Dickeya dadantii 3937]
          Length = 332

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     GK   +   + +G++ R TP++ + +     NP W+   
Sbjct: 94  DTPREGIVVNLAELRLYYFPKGKNTVIVYPIGIGQLGRNTPVMVTHVIERRPNPTWIPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +  +                                       +          G  N M
Sbjct: 154 NTRRH-----------------------------------YKEQGITLPAMVPGGPDNPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +        Y +H T     F   +R  +SGC+R+R   D+   L  D P  +R  
Sbjct: 179 GLFALRLEKSGGVYSIHGTNAD--FGIGMR-VSSGCIRLR-PEDI-EALFNDAPVGTRVQ 233

Query: 368 I 368
           I
Sbjct: 234 I 234


>gi|270261600|ref|ZP_06189873.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
 gi|270045084|gb|EFA18175.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
          Length = 337

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     G+   +   + +G+    TP+  + +++ + NP W    
Sbjct: 94  DTKREGIVVNLAELRLYYYPKGENKVIVYPIGIGQTGMHTPLQVTSVSQKIPNPTWTPTA 153

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           +I ++                                      +          G  N M
Sbjct: 154 NIRKR-----------------------------------YQAKGVTLPAVIPAGPENPM 178

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDT 360
               +     +  Y +H T     F   +R  +SGC+R+R  +I  L   + + T
Sbjct: 179 GLFAMRLAMGHGEYLIHGTNAN--FGIGMR-VSSGCIRLRPKDIEALFNMVPRGT 230


>gi|126665585|ref|ZP_01736567.1| hypothetical protein MELB17_23370 [Marinobacter sp. ELB17]
 gi|126630213|gb|EBA00829.1| hypothetical protein MELB17_23370 [Marinobacter sp. ELB17]
          Length = 336

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 42/174 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 +++N+    L    +  V     V VG  +  +P+ ++++   + +P W  P S
Sbjct: 103 DAKREGIVINLAEYRLYYFTDSGVQ-VYPVGVGTEENPSPLTNAQVTMALTSPAWYPPES 161

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I  +                                   ++           PG  N + 
Sbjct: 162 IRAE-----------------------------------HAAVGDFLPRMIPPGPDNPLG 186

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           S  +    +    +H T +   F   +   + GC R+   +I      + + TP
Sbjct: 187 SHALILSEK-GYLIHGTNKK--FGVGM-AVSHGCFRMYNEDISRFAYQIAQGTP 236


>gi|159028343|emb|CAO87241.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 166

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 52/161 (32%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 +L+N+    +   +  K+     V +GR   +TP    R+ +++  P W  P +
Sbjct: 35  TRTETRLLLNLKKRRVFVYQGQKIIASYPVAIGRPGWETPTGQFRVIQMVREPVWEHPFT 94

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                                       G+ V                     GK N + 
Sbjct: 95  ----------------------------GQLV-------------------PSGKNNPLG 107

Query: 310 STKIEFYSRNN--TYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +  I F++        H TP+  L     R  + GCVR+R+
Sbjct: 108 ARWIGFWTDGANFIGFHGTPQENLIG---RAVSHGCVRMRD 145


>gi|226330340|ref|ZP_03805858.1| hypothetical protein PROPEN_04257 [Proteus penneri ATCC 35198]
 gi|225201135|gb|EEG83489.1| hypothetical protein PROPEN_04257 [Proteus penneri ATCC 35198]
          Length = 305

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+    L    + G       + +G++ R+TP + + I++++ +P W    +I +  
Sbjct: 98  IVINLAELRLYYYPKEGGTVDVYPIGIGQLGRETPEMVTSISQLIKDPTWTPTANIRKN- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +          G  N M +  + 
Sbjct: 157 ----------------------------------YAAKGITLPAVVPAGPENPMGAYALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  Y +H T     F   +R  +SGC+R+R   D+   L    P  SR  +
Sbjct: 183 LAHSRGEYLIHGTNAD--FGIGLR-VSSGCIRLR-PNDI-ETLFNVVPKGSRVQV 232


>gi|117923807|ref|YP_864424.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
 gi|117607563|gb|ABK43018.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
          Length = 362

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 52/190 (27%), Gaps = 44/190 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L         +++N+P   L             V +GR    TPI  ++I R    P W 
Sbjct: 125 LPTDIHQGTALVINLPEMRLYHRRADGRLETFPVGIGREGFDTPISRAKIIRKKSAPSWY 184

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P SI ++                                        P       PG  
Sbjct: 185 VPASIREE---------------------------------------NPKLPAVIPPGAS 205

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           N + S  I         +H T +P       R  + GC+R+    D+           + 
Sbjct: 206 NPLGSHAIYLSLP-GYLIHGTNKPYGIG---RRVSHGCIRMY-PEDIPRLYTSARVGATV 260

Query: 366 YHIEEVVKTR 375
             + E  K  
Sbjct: 261 AIVNEPAKAG 270


>gi|218509616|ref|ZP_03507494.1| hypothetical protein RetlB5_20073 [Rhizobium etli Brasil 5]
          Length = 178

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 46/183 (25%), Gaps = 32/183 (17%)

Query: 212 KVGLRSTVIVGR--VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
                      +    R+           + NP       + +       +Q   Y    
Sbjct: 3   AERFHMDEAFLKGNEPRRRISASPGTVIKVVNPGETKSGEVARIIADKARKQVFAYDGAG 62

Query: 270 NIHMID------------EKGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAM 308
           N+                     V     +      P   F+Q          PG    +
Sbjct: 63  NLLAAYPASIGSTDTPSPSGNVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPV 122

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRY 366
            +  +         +H TPEP       R ++ GC+R+ N    +L   +    P  +  
Sbjct: 123 GTVWMALSKP-TYGIHGTPEPSKIG---RTQSHGCIRLTNWDATELAKMV---KPGVTVE 175

Query: 367 HIE 369
            ++
Sbjct: 176 FVD 178


>gi|295698357|ref|YP_003603012.1| LysM domain protein [Candidatus Riesia pediculicola USDA]
 gi|291157235|gb|ADD79680.1| LysM domain protein [Candidatus Riesia pediculicola USDA]
          Length = 319

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 50/244 (20%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E  +  FQ+  GL  +  ++      +  P    I   Q+       ++        
Sbjct: 56  ESLEDIMSRFQV--GLLGTLRINPKIDVYLPRPGSQIIIPSQM-------IIPNLKEDED 106

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +L+N+    L    +   +     V +G+ +  TP   ++I +++  P W IP   I+K 
Sbjct: 107 ILINLAELRLYHFLKKKNIVSVYPVGIGQKEASTPTFEAKIIQMIKKPIW-IPTKNIRKR 165

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                E          G  N M    + 
Sbjct: 166 ----------------------------------YELEGIKLPEVVPSGINNPMGMYAMR 191

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T     F    R  TSGC+R+R   D+               I E +K
Sbjct: 192 LSYGKGEYLIHGTN--ENFGIGSR-VTSGCIRLRK-EDIKKLFSSVKIGDKVRVINEPIK 247

Query: 374 TRKT 377
             K 
Sbjct: 248 YSKE 251


>gi|226942145|ref|YP_002797219.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
 gi|226717072|gb|ACO76210.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
          Length = 365

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 45/173 (26%)

Query: 196 VLVNIPAASLEAV---ENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           V+VN+    L        G+        V V +    TP+  +R+   + +P W +PRSI
Sbjct: 102 VVVNVAQRRLFYFPPAREGEPRKVITFPVGVAKEGWSTPLGSTRVTSKLRDPGWSVPRSI 161

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                    +     F     PG  N M  
Sbjct: 162 KAEK----------------------------------EAENGLPFPDYVPPGPDNPMGM 187

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             I      + ++H T +P      +R  + GC+++   N   L   L K+TP
Sbjct: 188 LAIGTGFP-SIFIHATNKPW--GVGMRQ-SHGCIQLYPENAKLLFDTLPKNTP 236


>gi|172037339|ref|YP_001803840.1| hypothetical protein cce_2426 [Cyanothece sp. ATCC 51142]
 gi|171698793|gb|ACB51774.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 58/210 (27%), Gaps = 70/210 (33%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +  V     EA         + L                  ++++N+    + A ++
Sbjct: 46  LPATSTVTPPVEEAAIPTPPETTQTLA----------------THLVLNLKERRVYAYQD 89

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +V     V +G+   +TP     + +++ +P W  P                       
Sbjct: 90  DQVIANYPVAIGKPGWETPRGDFSVIQMVEDPQWKNP----------------------- 126

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM--HDTPE 328
                     V                     G  + +    I F+     Y+  H TP 
Sbjct: 127 ------WNGRVS------------------AAGPNSPLGERWIGFWREGGKYIGFHGTPG 162

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             +        + GCVR+RN  +  L   +
Sbjct: 163 EHVMGQ---AVSHGCVRMRNRDVKALYELV 189


>gi|238895185|ref|YP_002919920.1| putative ATP synthase subunit [Klebsiella pneumoniae NTUH-K2044]
 gi|238547502|dbj|BAH63853.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 328

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    ++VN+    L     G+       + +G++  +TP + +R+ + + NP W    
Sbjct: 93  DVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTWTPTA 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I  + +                                    +          G  N +
Sbjct: 153 GIRARSL-----------------------------------EKGVTLPAVVPAGPNNPL 177

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     N  Y +H T  P          +SGC+R+ N  D+   L     T +   
Sbjct: 178 GRYALRLAYGNGEYLIHGTNAPDSVG---LRVSSGCMRM-NADDI-KALFSQVKTGTPVR 232

Query: 368 I 368
           I
Sbjct: 233 I 233


>gi|152970684|ref|YP_001335793.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262044179|ref|ZP_06017251.1| ErfK/srfK family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330012607|ref|ZP_08307442.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
 gi|150955533|gb|ABR77563.1| putative ATP synthase subunit [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259038476|gb|EEW39675.1| ErfK/srfK family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533766|gb|EGF60455.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
          Length = 328

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    ++VN+    L     G+       + +G++  +TP + +R+ + + NP W    
Sbjct: 93  DVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRVGQKIPNPTWTPTA 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I  + +                                    +          G  N +
Sbjct: 153 GIRARSL-----------------------------------EKGVTLPAVVPAGPNNPL 177

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     N  Y +H T  P          +SGC+R+ N  D+   L     T +   
Sbjct: 178 GRYALRLAYGNGEYLIHGTNAPDSVG---LRVSSGCMRM-NADDI-KALFSQVKTGTPVR 232

Query: 368 I 368
           I
Sbjct: 233 I 233


>gi|327393725|dbj|BAK11147.1| ErfK/YbiS/YcfS/YnhG family protein YcfS [Pantoea ananatis AJ13355]
          Length = 326

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 52/227 (22%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +E     +Q+  GL      +  T   +  P       LQ+ L               ++
Sbjct: 52  LEEIAARYQV--GLLGMLEANPGTDPWLPKPGTQLTIPLQMIL--------PDTPREGIV 101

Query: 198 VNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           VN+    L     G+   +   + +G++   TPI+ + I++ + NP W    +I ++   
Sbjct: 102 VNLAELRLYYYPKGEDKVIVYPIGIGQMGIVTPIMVTSISQKIPNPTWTPTANIRKR--- 158

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                            + E          G  N M    +   
Sbjct: 159 --------------------------------YAKEGITLPAVVPAGPDNPMGLHALRMA 186

Query: 317 SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                Y +H T     F   +R  +SGC+R+   +I  L   +   T
Sbjct: 187 RGTGQYLIHGTNAN--FGIGMR-VSSGCIRLRTEDIEALFNSVPVGT 230


>gi|291617273|ref|YP_003520015.1| YcfS [Pantoea ananatis LMG 20103]
 gi|291152303|gb|ADD76887.1| YcfS [Pantoea ananatis LMG 20103]
          Length = 326

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 52/227 (22%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           +E     +Q+  GL      +  T   +  P       LQ+ L               ++
Sbjct: 52  LEEIAARYQV--GLLGMLEANPGTDPWLPKPGTQLTIPLQMIL--------PDTPREGIV 101

Query: 198 VNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           VN+    L     G+   +   + +G++   TPI+ + I++ + NP W    +I ++   
Sbjct: 102 VNLAELRLYYYPKGEDKVIVYPIGIGQMGIVTPIMVTSISQKIPNPTWTPTANIRKR--- 158

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                            + E          G  N M    +   
Sbjct: 159 --------------------------------YAKEGITLPAVVPAGPDNPMGLHALRMA 186

Query: 317 SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                Y +H T     F   +R  +SGC+R+   +I  L   +   T
Sbjct: 187 RGTGQYLIHGTNAN--FGIGMR-VSSGCIRLRTEDIEALFNSVPVGT 230


>gi|255019839|ref|ZP_05291915.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254970768|gb|EET28254.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 309

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 55/169 (32%), Gaps = 42/169 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++++IPA  L       KV     V + R     P+  +RI   + NP W +P++I ++ 
Sbjct: 64  IVIDIPARRLYYFPPEQKVVYTYPVGIFRPKWPDPLGSTRIIAKVKNPSWTVPKNIQEE- 122

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++           PG  N M    +E
Sbjct: 123 ----------------------------------HAKAGEPIPAYFPPGPDNPMGELALE 148

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                  Y+H T +P      +R  + GC  V   N + L   +   TP
Sbjct: 149 TGWSQ-IYIHGTNKPW--GVGMR-VSHGCFHVYPENEVQLFKMVRVGTP 193


>gi|222054295|ref|YP_002536657.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
 gi|221563584|gb|ACM19556.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
          Length = 304

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 47/176 (26%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENG--KVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            ++ Q      +++N+    L     G  K  L   V +G   ++TP+    +   + NP
Sbjct: 100 WIIPQLPVQEGIVINLAEMRLYFFAPGDRKRILTFPVSIGEAGKETPLGSFSVIEKLANP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P SI+Q+     LR+                                         
Sbjct: 160 VWHVPPSILQER--PELRKTVA-------------------------------------A 180

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
           G  N + S  +    ++   +H T  P       R  + GC+R+   +I+ L   +
Sbjct: 181 GPDNPLGSRALRLSIKD-VLIHGTNRPW--GQGRR-VSHGCLRLYPEDILQLYEAV 232


>gi|237806833|ref|YP_002891273.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
 gi|237499094|gb|ACQ91687.1| ErfK/YbiS/YcfS/YnhG family protein [Tolumonas auensis DSM 9187]
          Length = 307

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 48/165 (29%), Gaps = 42/165 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+      + +++N+    L     GK       + +G++   TP    + + R   NP 
Sbjct: 91  LILPDTPRQGIVINVAEMRLYYYPKGKNTVEVLPIGIGQLGTDTPENWVTSVQRKRANPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     + ++                                    + +          G
Sbjct: 151 WTPTAKVRRE-----------------------------------YAEKGEPLPAVWPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             N M    +   +      H T  P  F   +R  + GCVR+RN
Sbjct: 176 PDNPMGLFALYIGNLYAI--HGTNAP--FGIGLR-VSHGCVRLRN 215


>gi|311279432|ref|YP_003941663.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308748627|gb|ADO48379.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 333

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 41/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL   +  + ++VN+    L     +G+      + +G++   TP + +R+ + + NP W
Sbjct: 88  LLLPDVPRKGIVVNLAELRLYYFPPDGRSVQVYPLGIGQLGLATPEMTTRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                       +       G 
Sbjct: 148 TPTPGIRQRSL-----------------------------------ERGVSLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     +  Y +H T  P          +SGC+R+    D+    ++     
Sbjct: 173 NNPLGRYALRLAYGSGEYLIHGTNAPSSVG---LRVSSGCMRMF-PDDIKALFMQVGVGT 228

Query: 364 SRYHIEEVVK 373
               I + VK
Sbjct: 229 PVRVINQPVK 238


>gi|108758605|ref|YP_628829.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus DK
           1622]
 gi|5701723|dbj|BAA83081.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus]
 gi|108462485|gb|ABF87670.1| penicillin-resistant DD-carboxypeptidase [Myxococcus xanthus DK
           1622]
          Length = 302

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 81/287 (28%), Gaps = 35/287 (12%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            + +      + +  + +    F+   +          P       A           I+
Sbjct: 22  TLRSGARGAAVTQLQNKLRAAGFNPGASDGV-----FGPKTQSAVQAFQRARGLQVDGIV 76

Query: 90  SRGGWPELPIR--------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
               W  L            L  G     V+ L++RL + G    S      F    +SA
Sbjct: 77  GPKTWSALNSAGGAGGSGPTLRNGARGEPVRALQQRLNVLGF--KSGTADGVFGPKTQSA 134

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK FQ   GL   G+V   T + + + V   +                    R +     
Sbjct: 135 VKAFQQSRGLVADGIVGPKTWDKLGINVQGPVTNPGGGGGGRVVTGYVNGKPRQI----- 189

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             SL +V NGK            +R      ++   +  N  +   RS+ +++ +    +
Sbjct: 190 --SLSSVPNGKEMRSDAAAA--YNRMYAAARAQGITLKVNSGF---RSMAEQEALYRAYK 242

Query: 262 D--------PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +        P Y        +D            W +    NF F +
Sbjct: 243 NGTGNLAAPPGYSNHQGGIAVDVNTGGTGTSTYRWMANNAKNFGFVR 289


>gi|301026908|ref|ZP_07190304.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|331663155|ref|ZP_08364065.1| putative LysM domain protein [Escherichia coli TA143]
 gi|300395255|gb|EFJ78793.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|331058954|gb|EGI30931.1| putative LysM domain protein [Escherichia coli TA143]
          Length = 334

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 62/206 (30%), Gaps = 43/206 (20%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229

Query: 362 -TWSRYHIEEVVKTRKTTPVKLATEV 386
                  ++  V+   T  V++   +
Sbjct: 230 VKVINEPVKYSVEPNGTRYVEVHRPL 255


>gi|114330477|ref|YP_746699.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91]
 gi|114307491|gb|ABI58734.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas eutropha C91]
          Length = 323

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 58/233 (24%)

Query: 174 RQLQVNLMRIKKLLEQ-------------KMGLRYVLVNIPAASLEAVEN---GK--VGL 215
             +  N    + L E+             +     +++N+P   L        G+    +
Sbjct: 68  EMMLANPNVNRWLPEEGAKVILPLRFIIPQAERTGLVINLPEMRLYYFPKPIKGQKPEII 127

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              V +GR+D  TP+  + I R   +P W  P+S+ ++ +                    
Sbjct: 128 THPVSIGRMDWNTPLGKTTIVRKQKDPTWTPPQSLRKEAI-------------------- 167

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
                             P  +     G  N +    +         +H T +P      
Sbjct: 168 --------------EEGRPPLLDVVPAGPDNPLGKYALYLGLP-GYLIHGTNKP--LGVG 210

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           +R  T GC+R+   +I +L   +   TP        ++        ++L   +
Sbjct: 211 MR-VTHGCMRLYPEDIEELFNLIPTGTPVQIVNQPIKLGWQGDLLYIELHPPL 262


>gi|290968167|ref|ZP_06559712.1| ErfK/YbiS/YcfS/YnhG [Megasphaera genomosp. type_1 str. 28L]
 gi|290781842|gb|EFD94425.1| ErfK/YbiS/YcfS/YnhG [Megasphaera genomosp. type_1 str. 28L]
          Length = 340

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 50/229 (21%), Gaps = 79/229 (34%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +N+ +  L   ENG+      V VG     TP     I     NP W             
Sbjct: 47  INLASRILTLYENGQKAAIYAVGVGTRRTPTPTGRFVIQNKAVNPTW------------- 93

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                                              P N   R  PG  N +    + FY 
Sbjct: 94  ---------------------------------VNPQNTQMRIGPGPNNPVGKRWMGFYG 120

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
                 H T  P        + + GCVR+                     +   V     
Sbjct: 121 SYGI--HGTNHPESVGK---YVSHGCVRM--------------KGNDIEGLFSRVTVGT- 160

Query: 378 TPVKLATEVPVHFVYISAWSP--KDSIIQF--RDDIYGLDNVHVGIIPL 422
                    PV   Y         D  I +    D Y    +    +  
Sbjct: 161 ---------PVMIYYDRIVIDRASDHTISYYIYPDGYERQPLTAAQVQK 200


>gi|198282692|ref|YP_002219013.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218665455|ref|YP_002424884.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198247213|gb|ACH82806.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218517668|gb|ACK78254.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 347

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 42/175 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +++N+P   L     G+ V     V + R     P+  +RI   + NP W +P++I ++ 
Sbjct: 98  IIINVPERRLFYFPPGQNVVYTYPVGIFRPKWPNPLGSTRIIAKVKNPTWTVPKNIQEE- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             ++            G  N M    +E
Sbjct: 157 ----------------------------------HAKVGEPIPAFFPAGPDNPMGELALE 182

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYH 367
                  ++H T +P      +R  + GC  V   N + L   +   TP  +   
Sbjct: 183 TGWSQ-IFIHGTNKPW--GVGMR-VSHGCFHVYPENEVQLFKMVKVGTPVTTIDQ 233


>gi|82777157|ref|YP_403506.1| hypothetical protein SDY_1909 [Shigella dysenteriae Sd197]
 gi|309788340|ref|ZP_07682944.1| lysM domain protein [Shigella dysenteriae 1617]
 gi|81241305|gb|ABB62015.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308923722|gb|EFP69225.1| lysM domain protein [Shigella dysenteriae 1617]
          Length = 334

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLSHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|237731316|ref|ZP_04561797.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906855|gb|EEH92773.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 334

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 41/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL        ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPREGIIVNLAELRLYYFPPGENIVQVFPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +                                               G 
Sbjct: 148 TPTPGIRKRSL-----------------------------------ERGITLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     N  Y +H T  P          +SGC+R+ N  D+     +     
Sbjct: 173 NNPLGRFALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRM-NAPDIKALFAQVRTGT 228

Query: 364 SRYHIEEVVK 373
               I E +K
Sbjct: 229 PVKVINEPIK 238


>gi|298529337|ref|ZP_07016740.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510773|gb|EFI34676.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 351

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 55/192 (28%), Gaps = 49/192 (25%)

Query: 185 KLLEQKMGLRYVLVNIPAASL-EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            L   + G   +++N+P   L     +  +     V +GR   +TP   +R+ + + +P 
Sbjct: 117 ILPPTRHGE--IVINLPEMRLYRFYRDIDMVRTYPVGIGRDGFETPPGDARVQKRVEDPS 174

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P S                                                    PG
Sbjct: 175 WTVPPS-----------------AREGFS------------------------RVVVPPG 193

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N +    I    R++  +H T  P       R  + GC+R+     +  +        
Sbjct: 194 PDNPLGGYWIGLS-RDSLGIHGTNFPWGVG---RKVSRGCIRLY-PEHIQQFFYDVEAGA 248

Query: 364 SRYHIEEVVKTR 375
               I E VK  
Sbjct: 249 KVEIIYEPVKLG 260


>gi|17230433|ref|NP_486981.1| hypothetical protein all2941 [Nostoc sp. PCC 7120]
 gi|17132035|dbj|BAB74640.1| all2941 [Nostoc sp. PCC 7120]
          Length = 572

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 66/214 (30%), Gaps = 33/214 (15%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P++      L  G+ S  V  L+E+L   G       ++  FDA  ++AV  FQ  + L 
Sbjct: 131 PQIATSKSSLKQGDISDRVMSLQEKLQADGYY--QGAITGNFDAATQAAVIQFQQANRLV 188

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G+V   T   +          L         L +Q      +     A          
Sbjct: 189 VDGIVGPQTSSVLASSTRKLAASLPQKTTLEPFLTQQPQNQVKISPQSAA---------- 238

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                           P    ++  I      + P+S++         Q+  Y  ++ I 
Sbjct: 239 ---------------PPSPSQKMRLIKTISGKISPKSVVYSGNGLFFAQNMMY--NHTIT 281

Query: 273 MIDEKGK--EVFVEEVDWNSPEPPNFIFRQDPGK 304
           + D   +  +V  +EVD +      F  +     
Sbjct: 282 VYDRNYELVKVIPDEVDLSKYGHSRFKGKYRGAP 315



 Score = 75.5 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L  G+ +  V  L+++L  SG           F +  E+AVK FQ  +GL   
Sbjct: 51  PTVAA--LKKGHRNPQVASLQQKLRASGYFPQVAT--GYFGSVTEAAVKRFQQANGLKAD 106

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQ 177
           G+V ++TL A+   + +    + 
Sbjct: 107 GIVGAATLAALESSIGVSESSIT 129


>gi|146311422|ref|YP_001176496.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
 gi|145318298|gb|ABP60445.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
          Length = 337

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 71/241 (29%), Gaps = 51/241 (21%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +++  + F     L       ++T+  +       I            +L       
Sbjct: 48  DKNLQAIARRFNTAAQLILE---TNNTIAPVYPAPGTVITIPSQ-------MLLPDTPRE 97

Query: 195 YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++VN+    L     G+ +     + +G++  +TP+  +R+++ + NP W     I  +
Sbjct: 98  GIVVNLAELRLYYFPPGENIVQVYPLGIGQLGLETPVSTTRVSQKIPNPTWTPTAGIRAR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            +                                    +          G  N +    +
Sbjct: 158 SLA-----------------------------------QGIKLPPVVPAGPNNPLGRFAL 182

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
                +  Y +H T  P          +SGC+R+ N  D+     +         I E V
Sbjct: 183 RLGIGHGEYLIHGTSAPDSVG---LRVSSGCMRM-NAPDIKALFAQARVGTRVQIINEPV 238

Query: 373 K 373
           K
Sbjct: 239 K 239


>gi|296269327|ref|YP_003651959.1| peptidoglycan-binding domain 1 protein [Thermobispora bispora DSM
           43833]
 gi|296092114|gb|ADG88066.1| Peptidoglycan-binding domain 1 protein [Thermobispora bispora DSM
           43833]
          Length = 270

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 75/262 (28%), Gaps = 67/262 (25%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG    +V+ L+ RL   G       +   +    ++AV  FQ  HG+ PS  V
Sbjct: 58  PATTLRLGAKGAAVRALQARLKELGY--HPGKIDGRYGGATQAAVWAFQKVHGIKPSSTV 115

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T  A+  P   ++            L+ +    R + VN+    +   + G+  L S
Sbjct: 116 GRRTWAALERPRAPKV------------LVPRGRPDR-IEVNLTQQIMVLYKKGRPVLIS 162

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            +  G          S I                                     + + K
Sbjct: 163 HISSG----------SGIPYTE-------------------------------YVVWNGK 181

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE-PILFNNVV 336
            +      +           +R      + +       Y+    + H         +  +
Sbjct: 182 RQRFSGSAI--TPIGDFRTTWRVSGWHRSYLG----MLYNP--IFFHGGIALHGSLSVPL 233

Query: 337 RFETSGCVRVRNIIDLDVWLLK 358
              + GCVR+   + +   L +
Sbjct: 234 YPASHGCVRL--PMHVASILPR 253


>gi|157145958|ref|YP_001453277.1| hypothetical protein CKO_01711 [Citrobacter koseri ATCC BAA-895]
 gi|157083163|gb|ABV12841.1| hypothetical protein CKO_01711 [Citrobacter koseri ATCC BAA-895]
          Length = 334

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 53/231 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +++  + F     L       ++T+  +  P    I   Q        LL       
Sbjct: 48  DKNLQAIARRFDTAAMLILE---ANNTIAPVPKPGTPIIIPSQ--------LLLPDAPRE 96

Query: 195 YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++VN+    L     G+       + +G    +TP++ +R+ + + NP W     I ++
Sbjct: 97  GIIVNLAELRLYYFPPGENSVQVYPIGIGLEGLETPVMATRVGQKIPNPTWTPTAGIRKR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            +                                               G  N +    +
Sbjct: 157 SL-----------------------------------ERGITLPPVVPAGPNNPLGRFAL 181

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
                N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 182 RLAYGNGEYLIHGTNAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|115377053|ref|ZP_01464270.1| penicillin-resistant DD-carboxypeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|310820371|ref|YP_003952729.1| penicillin-resistant dd-carboxypeptidase-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365961|gb|EAU64979.1| penicillin-resistant DD-carboxypeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393443|gb|ADO70902.1| penicillin-resistant DD-carboxypeptidase-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 303

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 45/156 (28%), Gaps = 28/156 (17%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        +     S+    F    A               +T A  + A    + ++
Sbjct: 21  TLKLGSSGASVKTLQQSLAKAGFSPGAADG---------QFGPKTAAAVK-AFQSAKGLV 70

Query: 90  SRG-----GW--------PELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           + G      W        P  P      L  G S   V  L+ RL   G    +      
Sbjct: 71  ADGIVGPKTWAKLNSAAAPSAPGGSGPTLKQGQSGAPVTALQNRLNQLGF--NAGAADGQ 128

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           F     +AVK FQ   GL   G+V   T   + + V
Sbjct: 129 FGPKTTAAVKAFQHSKGLVADGVVGPKTWNQLGIKV 164



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L LG+S  SV+ L++ L  +G           F     +AVK FQ   GL   G+V
Sbjct: 18  SQPTLKLGSSGASVKTLQQSLAKAGF--SPGAADGQFGPKTAAAVKAFQSAKGLVADGIV 75

Query: 158 DSSTLEAMNVPVDLRI 173
              T   +N       
Sbjct: 76  GPKTWAKLNSAAAPSA 91


>gi|284929484|ref|YP_003422006.1| hypothetical protein UCYN_09450 [cyanobacterium UCYN-A]
 gi|284809928|gb|ADB95625.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 181

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 54/166 (32%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++ +N+    +   +N +V     V +G+   +TP  +  +  ++ NP W  P       
Sbjct: 57  HISINLKERRVYVYQNSEVIKSYKVAIGKKGWETPKGNFAVMEMVENPQWKNP------- 109

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                     +                     G  + +    I 
Sbjct: 110 ----------------------WNGRIS------------------AAGPNSPLGERWIA 129

Query: 315 FYSRNN--TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           F  ++      H T             + GCVR+RN  + +L   +
Sbjct: 130 FSQQDGKYVGFHGTAGEHSMGK---AVSHGCVRMRNQDVKELYELV 172


>gi|260881076|ref|ZP_05403544.2| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
           20544]
 gi|260849442|gb|EEX69449.1| ErfK/YbiS/YcfS/YnhG family protein [Mitsuokella multacida DSM
           20544]
          Length = 412

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 57/226 (25%), Gaps = 79/226 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           ++N+ A S+ A+ + +      V  G+V   TP  + ++     NP W  P         
Sbjct: 77  VINLAARSIAAIRDNQKVALYPVGPGKVSTPTPTGYYKVIDKEVNPTWTDP--------- 127

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                 +       G  N +    I   
Sbjct: 128 -------------------------------------GDASASIPSGPSNPLGYRWIGIG 150

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
                  H T  P    +   + ++GC+R+                     I ++V+   
Sbjct: 151 GNYGI--HGTNRPESIGH---YVSNGCIRMH--------------EEDVEKIYDMVEVGT 191

Query: 377 TTPVKLATEVPVHFVYISAWSP--KDSIIQF--RDDIYGLDNVHVG 418
                     PV   Y         D  I +    D YG  NV   
Sbjct: 192 ----------PVEITYNRIVVEKTPDDQIAYYIYPDGYGWQNVTTA 227


>gi|224584279|ref|YP_002638077.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468806|gb|ACN46636.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 321

 Score = 80.5 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAHGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|156934258|ref|YP_001438174.1| hypothetical protein ESA_02088 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532512|gb|ABU77338.1| hypothetical protein ESA_02088 [Cronobacter sakazakii ATCC BAA-894]
          Length = 344

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 40/163 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 ++VN+    L     G+  +    + +G   R+TP++ +RI + + NP W    
Sbjct: 92  DTPREGIVVNLAELRLYYYPPGENRVEVYPIGIGLTGRETPVMTTRIIQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           ++  +                                   +  +          G  N +
Sbjct: 152 AMRAR-----------------------------------SQAQGITLPAVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
               +        Y +H T             +SGC+R+R   
Sbjct: 177 GRFALRLQQGGGEYLIHGTNARSSIG---LRASSGCIRMRAAD 216


>gi|324113443|gb|EGC07418.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325497145|gb|EGC95004.1| hypothetical protein ECD227_1242 [Escherichia fergusonii ECD227]
          Length = 333

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 40/167 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            N +    +     N  Y +H T  P          +SGC+R+    
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPD 216


>gi|218548736|ref|YP_002382527.1| hypothetical protein EFER_1374 [Escherichia fergusonii ATCC 35469]
 gi|218356277|emb|CAQ88895.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 333

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|150390862|ref|YP_001320911.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950724|gb|ABR49252.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 332

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 60/263 (22%), Gaps = 88/263 (33%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS--STLEAMNVPVDLRIRQ 175
           L   G            D    +A+  FQ  H L   G+      T+ +  V    R   
Sbjct: 49  LKTLGYFHEDTKQQ---DINKRNAIIRFQSEHNLTVDGIYGPQSETVLSALVNGSER--- 102

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
                  +  + +     +++ +N     L   E  KV  +  V  G+    TP     I
Sbjct: 103 -----RYLDVIDQPPTKGKWMTINKTKRILTLYEGDKVMKKYPVAQGKEPGLTPEGKFTI 157

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
              + NP W                                                   
Sbjct: 158 VNKLVNPGWG----------------------------------------------GAGI 171

Query: 296 FIFRQDPGKINAMASTKIEF-------------YSRNNTYMHDTPEPILFNNVVRFETSG 342
               +     N +    +                +  +     T             + G
Sbjct: 172 AQPVKGGSPNNPLGYRWMGINHGGGGSYGIHGNNNPRSI---GTNA-----------SLG 217

Query: 343 CVRVRNII--DLDVWLLKDTPTW 363
           CVR+ N    +L   +   TP W
Sbjct: 218 CVRMINSDVAELFDIISLKTPVW 240


>gi|117623857|ref|YP_852770.1| hypothetical protein APECO1_755 [Escherichia coli APEC O1]
 gi|218558547|ref|YP_002391460.1| hypothetical protein ECS88_1728 [Escherichia coli S88]
 gi|237705624|ref|ZP_04536105.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|115512981|gb|ABJ01056.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218365316|emb|CAR03037.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226900381|gb|EEH86640.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294492763|gb|ADE91519.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           IHE3034]
 gi|315286396|gb|EFU45832.1| LysM domain protein [Escherichia coli MS 110-3]
 gi|323952185|gb|EGB48058.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323956579|gb|EGB52317.1| ykud domain-containing protein [Escherichia coli H263]
          Length = 334

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|117619176|ref|YP_858054.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560583|gb|ABK37531.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 344

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 68/239 (28%), Gaps = 54/239 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              +E+A   FQ+  GL          +   N   D  + Q    L+   +L+       
Sbjct: 87  GQPLEAAAAKFQL--GLTN--------MLEANPKADPLLLQTGEKLIVPHQLILPDAPRE 136

Query: 195 YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQ 252
            +++N+    L     GK V     + +G++   TP    + + R    P W     +  
Sbjct: 137 GIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKMHA 196

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +                                    +    +       G  N M    
Sbjct: 197 E-----------------------------------YAARGESLPAVWPAGPDNPMGLFA 221

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           +          H T     F   +R  + GCVR+RN  D   +L K  P  +R      
Sbjct: 222 LYIGKMYAI--HGTNAQ--FGIGLR-VSHGCVRLRN--DDIEYLFKKVPVGTRVQFVNQ 273


>gi|284052766|ref|ZP_06382976.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca]
 gi|291565859|dbj|BAI88131.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 208

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 52/199 (26%), Gaps = 59/199 (29%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLM------RIKKLL-EQKMGLRYVLVNIPAASLEAVENG 211
             TL A      +   Q  +N          + L   ++     V++ +    +      
Sbjct: 40  EQTLSASASAPRIYPYQSILNPDVPPLDDPSQFLPIGEQQAPVKVVLRLGERRVYVYRGE 99

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                  V VG+   +TP    ++   + NP W  P                        
Sbjct: 100 SQIASYPVAVGKPGWETPTGTFQVTEKVENPQWENP------------------------ 135

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTYMHDTPEP 329
                           W           +  G  +A+    I F+   ++    H TP  
Sbjct: 136 ----------------WTGE-------VRPAGPNSALGLRWIGFWHDGKDAIGFHGTPTV 172

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     + GCVR+RN
Sbjct: 173 NSIGQ---AASHGCVRMRN 188


>gi|194434782|ref|ZP_03067032.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella
           dysenteriae 1012]
 gi|194416951|gb|EDX33070.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella
           dysenteriae 1012]
 gi|332093910|gb|EGI98963.1| lysM domain protein [Shigella dysenteriae 155-74]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 40/167 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            N +    +     N  Y +H T  P          +SGC+R+    
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPD 216


>gi|166366985|ref|YP_001659258.1| ErfK/YbiS/YcfS/YnhG family protein [Microcystis aeruginosa
           NIES-843]
 gi|166089358|dbj|BAG04066.1| ErfK/YbiS/YcfS/YnhG family protein [Microcystis aeruginosa
           NIES-843]
          Length = 166

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 52/154 (33%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           L+N+    +   +  K+     V +GR   +TP    R+  ++  P W  P +       
Sbjct: 42  LLNLKKRRVFVYQGQKIIASYPVAIGRRGWETPTGQFRVIHMVREPVWEHPFT------- 94

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                G+ V                     GK N + +  I F+
Sbjct: 95  ---------------------GQLV-------------------PSGKNNPLGARWIGFW 114

Query: 317 SRNN--TYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +        H TP+  L     R  + GCVR+R+
Sbjct: 115 TDGANFIGFHGTPQENLIG---RAVSHGCVRMRD 145


>gi|300924713|ref|ZP_07140659.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|301326558|ref|ZP_07219899.1| LysM domain protein [Escherichia coli MS 78-1]
 gi|300419091|gb|EFK02402.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300846778|gb|EFK74538.1| LysM domain protein [Escherichia coli MS 78-1]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|322421011|ref|YP_004200234.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
 gi|320127398|gb|ADW14958.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
          Length = 303

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 48/195 (24%)

Query: 185 KLLEQ--KMGLRYVLVNIPAASLEAVENGK--VGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +     +     V+VN+    L           L   + +G     TP+    I     
Sbjct: 92  WIPPAVSESERPSVVVNLAELRLFLFPKDSRSDILSFPIGIGDEGTDTPVGTYHIIEKTV 151

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           +PYW +P+SI ++                                        P      
Sbjct: 152 SPYWRVPKSIRRQR---------------------------------------PELPGVV 172

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N + S  +    R++  +H T  P       R  + GC+R+    D+     + +
Sbjct: 173 PPGPENPLGSHALRLS-RDSILIHGTNRPWGVG---RRSSHGCLRLY-PEDIAELFQRVS 227

Query: 361 PTWSRYHIEEVVKTR 375
                  I + VK  
Sbjct: 228 KGMRVTIINQPVKIG 242


>gi|309701903|emb|CBJ01215.1| putative peptidoglycan-binding protein [Escherichia coli ETEC
           H10407]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|260843984|ref|YP_003221762.1| hypothetical protein ECO103_1821 [Escherichia coli O103:H2 str.
           12009]
 gi|257759131|dbj|BAI30628.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|218705176|ref|YP_002412695.1| hypothetical protein ECUMN_1967 [Escherichia coli UMN026]
 gi|293405176|ref|ZP_06649168.1| L,D-transpeptidase YnhG [Escherichia coli FVEC1412]
 gi|298380819|ref|ZP_06990418.1| ynhG protein [Escherichia coli FVEC1302]
 gi|218432273|emb|CAR13163.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|291427384|gb|EFF00411.1| L,D-transpeptidase YnhG [Escherichia coli FVEC1412]
 gi|298278261|gb|EFI19775.1| ynhG protein [Escherichia coli FVEC1302]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|193068955|ref|ZP_03049914.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|192957750|gb|EDV88194.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|290509071|ref|ZP_06548442.1| ynhG [Klebsiella sp. 1_1_55]
 gi|289778465|gb|EFD86462.1| ynhG [Klebsiella sp. 1_1_55]
          Length = 328

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    ++VN+    L     G+       + +G++  +TP + +RI + + NP W    
Sbjct: 93  DVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRIGQKIPNPTWTPTA 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I  + +                                    +          G  N +
Sbjct: 153 GIRARSL-----------------------------------EKGVTLPAVVPAGPYNPL 177

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     N  Y +H T  P          +SGC+R+ N  D+   L     T +   
Sbjct: 178 GRYALRLAYGNGEYLIHGTNAPDSVG---LRVSSGCMRM-NADDI-KALFNQVKTGTPVR 232

Query: 368 I 368
           I
Sbjct: 233 I 233


>gi|209769214|gb|ACI82919.1| hypothetical protein ECs2385 [Escherichia coli]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|218699757|ref|YP_002407386.1| hypothetical protein ECIAI39_1380 [Escherichia coli IAI39]
 gi|218369743|emb|CAR17514.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|74311997|ref|YP_310416.1| hypothetical protein SSON_1478 [Shigella sonnei Ss046]
 gi|73855474|gb|AAZ88181.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323169246|gb|EFZ54922.1| lysM domain protein [Shigella sonnei 53G]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|24113067|ref|NP_707577.1| hypothetical protein SF1707 [Shigella flexneri 2a str. 301]
 gi|30063192|ref|NP_837363.1| hypothetical protein S1840 [Shigella flexneri 2a str. 2457T]
 gi|110805655|ref|YP_689175.1| hypothetical protein SFV_1701 [Shigella flexneri 5 str. 8401]
 gi|157159013|ref|YP_001462972.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E24377A]
 gi|191167846|ref|ZP_03029651.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|209918992|ref|YP_002293076.1| hypothetical protein ECSE_1801 [Escherichia coli SE11]
 gi|218554244|ref|YP_002387157.1| hypothetical protein ECIAI1_1730 [Escherichia coli IAI1]
 gi|218695239|ref|YP_002402906.1| hypothetical protein EC55989_1845 [Escherichia coli 55989]
 gi|256018128|ref|ZP_05431993.1| hypothetical protein ShiD9_04383 [Shigella sp. D9]
 gi|260855502|ref|YP_003229393.1| hypothetical protein ECO26_2406 [Escherichia coli O26:H11 str.
           11368]
 gi|260868169|ref|YP_003234571.1| hypothetical protein ECO111_2147 [Escherichia coli O111:H- str.
           11128]
 gi|293446052|ref|ZP_06662474.1| ynhG protein [Escherichia coli B088]
 gi|300820069|ref|ZP_07100245.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300821449|ref|ZP_07101596.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300904529|ref|ZP_07122368.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|301303193|ref|ZP_07209319.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|307310751|ref|ZP_07590397.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|309793444|ref|ZP_07687871.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|331668362|ref|ZP_08369210.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331677549|ref|ZP_08378224.1| putative LysM domain protein [Escherichia coli H591]
 gi|332279173|ref|ZP_08391586.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
 gi|24052040|gb|AAN43284.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30041444|gb|AAP17172.1| hypothetical protein S1840 [Shigella flexneri 2a str. 2457T]
 gi|110615203|gb|ABF03870.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|157081043|gb|ABV20751.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E24377A]
 gi|190902105|gb|EDV61849.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|209912251|dbj|BAG77325.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218351971|emb|CAU97703.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218361012|emb|CAQ98587.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|257754151|dbj|BAI25653.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257764525|dbj|BAI36020.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|281601115|gb|ADA74099.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella flexneri
           2002017]
 gi|291322882|gb|EFE62310.1| ynhG protein [Escherichia coli B088]
 gi|300403523|gb|EFJ87061.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300525952|gb|EFK47021.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300527374|gb|EFK48436.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300841602|gb|EFK69362.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|306908929|gb|EFN39425.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|308123031|gb|EFO60293.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|313648960|gb|EFS13397.1| lysM domain protein [Shigella flexneri 2a str. 2457T]
 gi|315060983|gb|ADT75310.1| murein L,D-transpeptidase [Escherichia coli W]
 gi|315257519|gb|EFU37487.1| LysM domain protein [Escherichia coli MS 85-1]
 gi|320181296|gb|EFW56215.1| L,D-transpeptidase YnhG [Shigella boydii ATCC 9905]
 gi|323152815|gb|EFZ39085.1| lysM domain protein [Escherichia coli EPECa14]
 gi|323163472|gb|EFZ49298.1| lysM domain protein [Escherichia coli E128010]
 gi|323180994|gb|EFZ66532.1| lysM domain protein [Escherichia coli 1180]
 gi|323186049|gb|EFZ71405.1| lysM domain protein [Escherichia coli 1357]
 gi|323378445|gb|ADX50713.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323948027|gb|EGB44019.1| ykud domain-containing protein [Escherichia coli H120]
 gi|324016508|gb|EGB85727.1| LysM domain protein [Escherichia coli MS 117-3]
 gi|324119162|gb|EGC13050.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331063556|gb|EGI35467.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331074009|gb|EGI45329.1| putative LysM domain protein [Escherichia coli H591]
 gi|332101525|gb|EGJ04871.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
 gi|332343397|gb|AEE56731.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332756998|gb|EGJ87341.1| lysM domain protein [Shigella flexneri 4343-70]
 gi|332757787|gb|EGJ88116.1| lysM domain protein [Shigella flexneri 2747-71]
 gi|332758519|gb|EGJ88840.1| lysM domain protein [Shigella flexneri K-671]
 gi|332766884|gb|EGJ97084.1| putative L,D-transpeptidase YcfS [Shigella flexneri 2930-71]
 gi|333003811|gb|EGK23347.1| lysM domain protein [Shigella flexneri VA-6]
 gi|333003966|gb|EGK23501.1| lysM domain protein [Shigella flexneri K-218]
 gi|333005920|gb|EGK25436.1| lysM domain protein [Shigella flexneri K-272]
 gi|333018052|gb|EGK37357.1| lysM domain protein [Shigella flexneri K-304]
 gi|333018835|gb|EGK38128.1| lysM domain protein [Shigella flexneri K-227]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|16129634|ref|NP_416193.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89108518|ref|AP_002298.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|157161143|ref|YP_001458461.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli HS]
 gi|170019972|ref|YP_001724926.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|170081338|ref|YP_001730658.1| hypothetical protein ECDH10B_1812 [Escherichia coli str. K-12
           substr. DH10B]
 gi|194438521|ref|ZP_03070610.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|238900893|ref|YP_002926689.1| hypothetical protein BWG_1492 [Escherichia coli BW2952]
 gi|253773365|ref|YP_003036196.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161739|ref|YP_003044847.1| hypothetical protein ECB_01647 [Escherichia coli B str. REL606]
 gi|256022659|ref|ZP_05436524.1| hypothetical protein E4_04749 [Escherichia sp. 4_1_40B]
 gi|300930852|ref|ZP_07146222.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|300951270|ref|ZP_07165119.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300958559|ref|ZP_07170689.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|301027877|ref|ZP_07191178.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|312969703|ref|ZP_07783886.1| lysM domain protein [Escherichia coli 1827-70]
 gi|3025249|sp|P76193|YNHG_ECOLI RecName: Full=Probable L,D-transpeptidase YnhG; Flags: Precursor
 gi|1787968|gb|AAC74748.1| murein L,D-transpeptidase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675073|dbj|BAA15458.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|157066823|gb|ABV06078.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           HS]
 gi|169754900|gb|ACA77599.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|169889173|gb|ACB02880.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|194422531|gb|EDX38529.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|238860319|gb|ACR62317.1| conserved protein [Escherichia coli BW2952]
 gi|242377405|emb|CAQ32154.1| L,D-transpeptidase YnhG [Escherichia coli BL21(DE3)]
 gi|253324409|gb|ACT29011.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973640|gb|ACT39311.1| hypothetical protein ECB_01647 [Escherichia coli B str. REL606]
 gi|253977835|gb|ACT43505.1| hypothetical protein ECD_01647 [Escherichia coli BL21(DE3)]
 gi|260449199|gb|ACX39621.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|299879033|gb|EFI87244.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|300314768|gb|EFJ64552.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|300449451|gb|EFK13071.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300461327|gb|EFK24820.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|310337988|gb|EFQ03077.1| lysM domain protein [Escherichia coli 1827-70]
 gi|315136319|dbj|BAJ43478.1| hypothetical protein ECDH1ME8569_1622 [Escherichia coli DH1]
 gi|315618873|gb|EFU99456.1| lysM domain protein [Escherichia coli 3431]
 gi|323937281|gb|EGB33560.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323940655|gb|EGB36846.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323962169|gb|EGB57764.1| ykud domain-containing protein [Escherichia coli H489]
 gi|323973943|gb|EGB69115.1| ykud domain-containing protein [Escherichia coli TA007]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|301647861|ref|ZP_07247643.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|301074002|gb|EFK88808.1| LysM domain protein [Escherichia coli MS 146-1]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|300898541|ref|ZP_07116874.1| LysM domain protein [Escherichia coli MS 198-1]
 gi|300357805|gb|EFJ73675.1| LysM domain protein [Escherichia coli MS 198-1]
          Length = 331

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|293409991|ref|ZP_06653567.1| conserved hypothetical protein [Escherichia coli B354]
 gi|331673236|ref|ZP_08374004.1| putative LysM domain protein [Escherichia coli TA280]
 gi|222033434|emb|CAP76175.1| Uncharacterized protein ynhG [Escherichia coli LF82]
 gi|284921599|emb|CBG34671.1| putative peptidoglycan-binding protein [Escherichia coli 042]
 gi|291470459|gb|EFF12943.1| conserved hypothetical protein [Escherichia coli B354]
 gi|312946278|gb|ADR27105.1| hypothetical protein NRG857_08405 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|331069434|gb|EGI40821.1| putative LysM domain protein [Escherichia coli TA280]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|170682137|ref|YP_001743576.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli SMS-3-5]
 gi|300938999|ref|ZP_07153697.1| LysM domain protein [Escherichia coli MS 21-1]
 gi|170519855|gb|ACB18033.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           SMS-3-5]
 gi|300456102|gb|EFK19595.1| LysM domain protein [Escherichia coli MS 21-1]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|15802090|ref|NP_288112.1| hypothetical protein Z2706 [Escherichia coli O157:H7 EDL933]
 gi|12515680|gb|AAG56665.1|AE005391_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           L       + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LXLPDAPRQGIIVNLAELRLYYYPPGENIXQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|15831639|ref|NP_310412.1| hypothetical protein ECs2385 [Escherichia coli O157:H7 str. Sakai]
 gi|168751911|ref|ZP_02776933.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|168762261|ref|ZP_02787268.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|168770437|ref|ZP_02795444.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|168775025|ref|ZP_02800032.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|168782090|ref|ZP_02807097.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|168789812|ref|ZP_02814819.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|188496112|ref|ZP_03003382.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|195937362|ref|ZP_03082744.1| hypothetical protein EscherichcoliO157_13082 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810266|ref|ZP_03252142.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816672|ref|ZP_03257792.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208820505|ref|ZP_03260825.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399001|ref|YP_002270747.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217328734|ref|ZP_03444815.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254793295|ref|YP_003078132.1| hypothetical protein ECSP_2245 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261227877|ref|ZP_05942158.1| hypothetical protein EscherichiacoliO157_25212 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258389|ref|ZP_05950922.1| hypothetical protein EscherichiacoliO157EcO_21562 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293414994|ref|ZP_06657637.1| ynhG protein [Escherichia coli B185]
 gi|300918048|ref|ZP_07134669.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|13361852|dbj|BAB35808.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769387|gb|EDU33231.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014124|gb|EDU52246.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188491311|gb|EDU66414.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|189000273|gb|EDU69259.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189360604|gb|EDU79023.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189367460|gb|EDU85876.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370588|gb|EDU89004.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|208724782|gb|EDZ74489.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208731015|gb|EDZ79704.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208740628|gb|EDZ88310.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160401|gb|ACI37834.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|209769208|gb|ACI82916.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769210|gb|ACI82917.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769212|gb|ACI82918.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|209769216|gb|ACI82920.1| hypothetical protein ECs2385 [Escherichia coli]
 gi|217318081|gb|EEC26508.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|254592695|gb|ACT72056.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|291432642|gb|EFF05621.1| ynhG protein [Escherichia coli B185]
 gi|300414739|gb|EFJ98049.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|320188366|gb|EFW63028.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. EC1212]
 gi|320641893|gb|EFX11261.1| hypothetical protein ECO5101_07362 [Escherichia coli O157:H7 str.
           G5101]
 gi|320647349|gb|EFX16157.1| hypothetical protein ECO9389_09098 [Escherichia coli O157:H- str.
           493-89]
 gi|320652643|gb|EFX20912.1| hypothetical protein ECO2687_03590 [Escherichia coli O157:H- str. H
           2687]
 gi|320653028|gb|EFX21224.1| hypothetical protein ECO7815_12520 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320658712|gb|EFX26389.1| hypothetical protein ECO5905_08454 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320668702|gb|EFX35507.1| hypothetical protein ECOSU61_21203 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326342045|gb|EGD65826.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. 1044]
 gi|326343597|gb|EGD67359.1| L,D-transpeptidase YnhG [Escherichia coli O157:H7 str. 1125]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|331683185|ref|ZP_08383786.1| putative LysM domain protein [Escherichia coli H299]
 gi|331079400|gb|EGI50597.1| putative LysM domain protein [Escherichia coli H299]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|291282808|ref|YP_003499626.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O55:H7 str. CB9615]
 gi|290762681|gb|ADD56642.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O55:H7 str. CB9615]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|215486853|ref|YP_002329284.1| hypothetical protein E2348C_1763 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264925|emb|CAS09311.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|26247928|ref|NP_753968.1| hypothetical protein c2073 [Escherichia coli CFT073]
 gi|227885903|ref|ZP_04003708.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300994863|ref|ZP_07180976.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|301050991|ref|ZP_07197837.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|312966831|ref|ZP_07781049.1| lysM domain protein [Escherichia coli 2362-75]
 gi|331647169|ref|ZP_08348263.1| putative LysM domain protein [Escherichia coli M605]
 gi|26108331|gb|AAN80533.1|AE016761_108 Hypothetical protein ynhG precursor [Escherichia coli CFT073]
 gi|227837082|gb|EEJ47548.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300297368|gb|EFJ53753.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|300406203|gb|EFJ89741.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|307553699|gb|ADN46474.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           ABU 83972]
 gi|312288295|gb|EFR16197.1| lysM domain protein [Escherichia coli 2362-75]
 gi|315290525|gb|EFU49899.1| LysM domain protein [Escherichia coli MS 153-1]
 gi|320195426|gb|EFW70051.1| L,D-transpeptidase YnhG [Escherichia coli WV_060327]
 gi|323187102|gb|EFZ72418.1| lysM domain protein [Escherichia coli RN587/1]
 gi|330911485|gb|EGH39995.1| l,D-transpeptidase YnhG [Escherichia coli AA86]
 gi|331043952|gb|EGI16088.1| putative LysM domain protein [Escherichia coli M605]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|206580759|ref|YP_002238022.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288935010|ref|YP_003439069.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206569817|gb|ACI11593.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288889719|gb|ADC58037.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 328

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 42/181 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +    ++VN+    L     G+       + +G++  +TP + +RI + + NP W    
Sbjct: 93  DVPREGIVVNLAELRLYYFPPGENQVQVYPLGIGQLGLETPEMTTRIGQKIPNPTWTPTA 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I  + +                                    +          G  N +
Sbjct: 153 GIRARSL-----------------------------------EKGVTLPAVVPAGPYNPL 177

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +     N  Y +H T  P          +SGC+R+ N  D+   L     T +   
Sbjct: 178 GRYALRLAYGNGEYLIHGTNAPDSVG---LRVSSGCMRM-NADDI-KALFNQVKTGTPVR 232

Query: 368 I 368
           I
Sbjct: 233 I 233


>gi|281178748|dbj|BAI55078.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 334

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 49/167 (29%), Gaps = 40/167 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            N +    +     N  Y +H T  P          +SGC+R+    
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPD 216


>gi|331653078|ref|ZP_08354083.1| putative LysM domain protein [Escherichia coli M718]
 gi|331049176|gb|EGI21248.1| putative LysM domain protein [Escherichia coli M718]
          Length = 334

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|284006311|emb|CBA71547.1| peptidoglycan-binding protein [Arsenophonus nasoniae]
          Length = 322

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 41/184 (22%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G    +   + +G++   TP + + +++++ NP W    +I ++ 
Sbjct: 115 IIVNLAELRLYYFPKGSNKVIVYPIGIGQLGANTPKMVTTVSQLIKNPTWTPTANIRKR- 173

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +          G  N M    + 
Sbjct: 174 ----------------------------------YAADGVILPAVFPAGPDNPMGLYALR 199

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                  Y +H T     F   +R  +SGC+R+R   D++              I E +K
Sbjct: 200 LSYGKGQYLIHGTNAN--FGIGLR-VSSGCIRLR-PEDIEALFYSIPVGTRVQVINEPIK 255

Query: 374 TRKT 377
             K 
Sbjct: 256 YAKE 259


>gi|323968444|gb|EGB63850.1| ykud domain-containing protein [Escherichia coli M863]
 gi|323978185|gb|EGB73271.1| ykud domain-containing protein [Escherichia coli TW10509]
 gi|327252795|gb|EGE64449.1| lysM domain protein [Escherichia coli STEC_7v]
          Length = 334

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|283833341|ref|ZP_06353082.1| protein ErfK/srfK [Citrobacter youngae ATCC 29220]
 gi|291070982|gb|EFE09091.1| protein ErfK/srfK [Citrobacter youngae ATCC 29220]
          Length = 334

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 56/190 (29%), Gaps = 41/190 (21%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL        ++VN+    L     G+ +     + +G    +TP++ +RI + + NP W
Sbjct: 88  LLLPDAPREGIIVNLAELRLYYYPPGENIVQVFPIGIGLQGLETPVMETRIGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I ++ +                                               G 
Sbjct: 148 TPTAGIRKRSL-----------------------------------ERGITLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N +    +     N  Y +H T  P          +SGC+R+ N  D+     +     
Sbjct: 173 NNPLGRFALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRM-NAPDIKALFAQVRTGT 228

Query: 364 SRYHIEEVVK 373
               I E +K
Sbjct: 229 PVRVINEPIK 238


>gi|260597669|ref|YP_003210240.1| hypothetical protein CTU_18770 [Cronobacter turicensis z3032]
 gi|260216846|emb|CBA30361.1| Uncharacterized protein ynhG [Cronobacter turicensis z3032]
          Length = 344

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 63/217 (29%), Gaps = 50/217 (23%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
             +E   + +Q       +G++    L   N  VD  +      L    ++L        
Sbjct: 48  QNLEKIAEQYQ-------TGVL---LLLEANNTVDPYLPMPGSELTIPTQMLLPDTPREG 97

Query: 196 VLVNIPAASLEAVENGKVG-LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++VN+    L     G+       + +G   R+TP++ +RI + + NP W    ++  + 
Sbjct: 98  IVVNLAELRLYYYPPGENRVAVYPIGIGLTGRETPVMTTRIIQKIPNPTWTPTAAMRAR- 156

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                             +             G  N +    + 
Sbjct: 157 ----------------------------------SQAHGVTLPAVIPAGPNNPLGRFALR 182

Query: 315 FYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                  Y +H T             +SGC+R+R   
Sbjct: 183 LQQGGGEYLIHGTNARSSIG---LRASSGCIRMRAAD 216


>gi|209525406|ref|ZP_03273946.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
 gi|209494086|gb|EDZ94401.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
          Length = 208

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 52/199 (26%), Gaps = 59/199 (29%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLM------RIKKLL-EQKMGLRYVLVNIPAASLEAVENG 211
             TL A      +   Q  +N          K L   ++     +++ +    +      
Sbjct: 40  EPTLSASGSAPRIYPYQSLLNPDVPPLDDPSKFLPLGEQQAQLKLVLRLGERRVYVYRGE 99

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                  V VG+   +TP    ++   + NP W  P                        
Sbjct: 100 SQIASYPVAVGKPGWETPTGTFQVTEKVENPQWQNP------------------------ 135

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTYMHDTPEP 329
                           W           +  G  +A+    I F+   ++    H TP  
Sbjct: 136 ----------------WTGE-------VRPAGPNSALGLRWIGFWHDGKDAIGFHGTPTV 172

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     + GCVR+RN
Sbjct: 173 NSIGQ---AASHGCVRMRN 188


>gi|170768916|ref|ZP_02903369.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
 gi|170122464|gb|EDS91395.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
          Length = 334

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|94266656|ref|ZP_01290333.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1]
 gi|93452703|gb|EAT03254.1| ErfK/YbiS/YcfS/YnhG [delta proteobacterium MLMS-1]
          Length = 328

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 56/184 (30%), Gaps = 49/184 (26%)

Query: 184 KKLLEQKM-GLRYVLVNIPAASLEAVE---NGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           + L +        +++N+    L       +    L   V +G    +TP    RI   +
Sbjct: 118 RVLPDFTPTAEPAIVINLAEKRLYYFHRRGDEAAVLTFPVGIGADYGETPTGEYRITNKL 177

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W +P SI Q+                                        P     
Sbjct: 178 VEPSWTVPPSIRQRR---------------------------------------PELPPI 198

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLL 357
             PG  N M S  ++     + Y+H T  P       R  T GC+R+   +I  L   + 
Sbjct: 199 VPPGPDNPMGSHALQLSGG-SYYIHGTNRPWSIG---RRATQGCLRLYPEDIRVLFRLVE 254

Query: 358 KDTP 361
           + TP
Sbjct: 255 RQTP 258


>gi|161503692|ref|YP_001570804.1| hypothetical protein SARI_01776 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865039|gb|ABX21662.1| hypothetical protein SARI_01776 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 43/189 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D++    + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-GDIETLFRQVTPGTKV 238

Query: 366 YHIEEVVKT 374
             I   +KT
Sbjct: 239 NIINTPIKT 247


>gi|304439584|ref|ZP_07399489.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371963|gb|EFM25564.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 257

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 62/227 (27%), Gaps = 61/227 (26%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
                  S    A     +K FQ    +  +G+VD+ T +            L    +R+
Sbjct: 27  YTRPNNFSNLKGAARIEGIKRFQAELNVPTTGVVDAMTKKV-----------LHTENIRV 75

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +  ++      ++ VN+    L   +  +V  +  V VG     TP +  +I     NP 
Sbjct: 76  RDYVKPPTNGNWITVNLINRILTMYKGNEVLYKFPVAVGASATPTPAVKGKIMNKHVNPA 135

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W                          +                        +       
Sbjct: 136 W------------------------GGM---------------------GGKYKATSPDD 150

Query: 304 KINAMASTKIEFYSRN--NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             N +    +           +H T +P        + ++GC+R+ N
Sbjct: 151 PYNPLGERWMGLNLGKYSGYGIHGTIKPHQIGM---YVSNGCIRMFN 194


>gi|294787984|ref|ZP_06753228.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
 gi|294484277|gb|EFG31960.1| ErfK/YbiS/YcfS/YnhG family protein [Simonsiella muelleri ATCC
           29453]
          Length = 378

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 64/233 (27%), Gaps = 73/233 (31%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            YVL+NIP   L    NG +     V VG+   QT +   +I    ++P W IP+SI  +
Sbjct: 18  YYVLINIPQQRLFLFNNGALEKVYPVAVGKAMTQTNLGEHKIGGKAYDPTWHIPKSIQAE 77

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                           V      P   +F +      ++     
Sbjct: 78  MKTPQ-------------------------TSVPPGPNNPLGPVFVRLGNPKLSLG---- 108

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
                    +H T  P          + GCVR+     +D                    
Sbjct: 109 ---------IHGTNAPNSV---PGVRSHGCVRMKSEQALDFA----------------RT 140

Query: 372 VKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF----RDDIYGLDNVHVGII 420
           + T     V           Y  A    D   Q       D Y   N+++ ++
Sbjct: 141 ITTGSDALVG----------YEMAALNVDGKNQLWLAAYQDPYNKKNLNIEML 183


>gi|296102710|ref|YP_003612856.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057169|gb|ADF61907.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 337

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 63/218 (28%), Gaps = 50/218 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  +++  + F     L       ++T+  +N      I            +L       
Sbjct: 48  DTKLQTIARRFNTAAQLILE---TNNTIAPVNPAPGTVITIPSQ-------MLLPDTPRE 97

Query: 195 YVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++VN+    L      G +     + +G++  +TP+  +R+++ + NP W     I  +
Sbjct: 98  GIVVNLAELRLYYYPPGGNIVQVFPLGIGQLGLETPVTTTRVSQKIPNPTWTPTPGIRAR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            +                                    +          G  N +    +
Sbjct: 158 SL-----------------------------------EQGIKLPPVVPAGPNNPLGRFAL 182

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                N  Y +H T  P          +SGC+R+    
Sbjct: 183 RLGVGNGEYLIHGTSAPDSVG---LRVSSGCMRMNAPD 217


>gi|110641799|ref|YP_669529.1| hypothetical protein ECP_1625 [Escherichia coli 536]
 gi|191171695|ref|ZP_03033242.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300987772|ref|ZP_07178350.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|110343391|gb|ABG69628.1| hypothetical protein YnhG precursor [Escherichia coli 536]
 gi|190908025|gb|EDV67617.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300306060|gb|EFJ60580.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|324011457|gb|EGB80676.1| LysM domain protein [Escherichia coli MS 60-1]
          Length = 334

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQIYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|320086345|emb|CBY96118.1| Uncharacterized protein ycfS Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 321

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TATIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|270160068|ref|ZP_06188724.1| ErfK/YbiS/YcfS/YnhG family protein [Legionella longbeachae D-4968]
 gi|289165151|ref|YP_003455289.1| hypothetical protein LLO_1815 [Legionella longbeachae NSW150]
 gi|269988407|gb|EEZ94662.1| ErfK/YbiS/YcfS/YnhG family protein [Legionella longbeachae D-4968]
 gi|288858324|emb|CBJ12192.1| hypothetical protein LLO_1815 [Legionella longbeachae NSW150]
          Length = 295

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 43/187 (22%)

Query: 192 GLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
             + +++N+    L    EN  V L   + +GR   +TP+  +++   + NP W  P   
Sbjct: 96  PRKGIVINLAEYRLYYFPENENVVLTFPIGIGRKGWKTPLGVTKVVAKVANPKWR-PTKN 154

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           ++++                                                G  N +  
Sbjct: 155 LREE----------------------------------AEKNGDFLPEELPSGPYNPLGQ 180

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-IE 369
             +         +H T          R  ++GC+R+    D+   L +  P  ++   I 
Sbjct: 181 YTLRLGWP-TFLIHGTNRQD--GIGAR-VSAGCIRMY-PDDI-ELLFRSVPVGTQVRIIN 234

Query: 370 EVVKTRK 376
           + VKT K
Sbjct: 235 QPVKTGK 241


>gi|168467173|ref|ZP_02701015.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195630351|gb|EDX48977.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 321

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|56413799|ref|YP_150874.1| hypothetical protein SPA1635 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362722|ref|YP_002142359.1| hypothetical protein SSPA1520 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128056|gb|AAV77562.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094199|emb|CAR59703.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 321

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|213857814|ref|ZP_03384785.1| hypothetical protein SentesT_22135 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 263

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TTNIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|220916767|ref|YP_002492071.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219954621|gb|ACL65005.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 285

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 46/180 (25%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        ++VN+    L  +  G    +   V +G+   +TP+    +      P 
Sbjct: 77  WILPPSAAPGSIVVNLSEMRLYLLPGGGAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 136

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 137 WYPPASMRRDD---------------------------------------PTLPDRVPPG 157

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             N + +  +   +  +  +H T EP  F    R  + GCVR+   +I  L   +   TP
Sbjct: 158 PDNPLGTHALRLSAG-SILIHGTDEP--FGIG-RKFSHGCVRLYPEDIPRLFEVVPLKTP 213


>gi|16760090|ref|NP_455707.1| hypothetical protein STY1255 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142139|ref|NP_805481.1| hypothetical protein t1705 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213161680|ref|ZP_03347390.1| hypothetical protein Salmoneentericaenterica_17412 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213425038|ref|ZP_03357788.1| hypothetical protein SentesTyphi_04655 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649270|ref|ZP_03379323.1| hypothetical protein SentesTy_19505 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289829624|ref|ZP_06547179.1| hypothetical protein Salmonellentericaenterica_23664 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25323528|pir||AH0644 probable exported protein STY1255 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502384|emb|CAD08339.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137768|gb|AAO69330.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 263

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TTNIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|168239119|ref|ZP_02664177.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194734349|ref|YP_002114220.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|204930801|ref|ZP_03221674.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|194709851|gb|ACF89072.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197288095|gb|EDY27482.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|204320260|gb|EDZ05464.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|322616591|gb|EFY13500.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322619894|gb|EFY16768.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322622462|gb|EFY19307.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629420|gb|EFY26197.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633908|gb|EFY30646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322636839|gb|EFY33542.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322641361|gb|EFY38000.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322645126|gb|EFY41655.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322652290|gb|EFY48646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655641|gb|EFY51943.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660946|gb|EFY57176.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322665468|gb|EFY61656.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322667555|gb|EFY63716.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673651|gb|EFY69753.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322677577|gb|EFY73641.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322679758|gb|EFY75797.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322687231|gb|EFY83203.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323194017|gb|EFZ79218.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199426|gb|EFZ84519.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323202442|gb|EFZ87484.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208845|gb|EFZ93783.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323210653|gb|EFZ95532.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323217819|gb|EGA02534.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323229622|gb|EGA13745.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323232847|gb|EGA16943.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240117|gb|EGA24161.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323242896|gb|EGA26917.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323246811|gb|EGA30781.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323254289|gb|EGA38106.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323261592|gb|EGA45169.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266984|gb|EGA50469.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323272088|gb|EGA55502.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 321

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|261339562|ref|ZP_05967420.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
 gi|288318379|gb|EFC57317.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
          Length = 337

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 74/259 (28%), Gaps = 57/259 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  ++   + F     L       ++T+  +N      I            +L       
Sbjct: 48  DNKLQDIARRFNTAAQLILE---TNNTIAPVNPAPGTVITIPSQ-------MLLPDTPRE 97

Query: 195 YVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++VN+    L     G+  +    + +G++  +TP+  +R+++ + NP W     I  +
Sbjct: 98  GIVVNLAELRLYYFPPGENRVEVYPLGIGQLGLETPVSTTRVSQKIPNPTWTPTAGIRAR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            +                                    +          G  N +    +
Sbjct: 158 SLA-----------------------------------QGIKLPPVVPAGPNNPLGRFAL 182

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE-- 370
                N  Y +H T  P          +SGC+R+         L +     +R  I    
Sbjct: 183 RLGIGNGEYLIHGTSAPNSVG---LRVSSGCMRMNAPD--IKALFEQVRVGTRVQIINEP 237

Query: 371 ---VVKTRKTTPVKLATEV 386
               ++      +++   +
Sbjct: 238 VKFAMEPDGRRYIEVHRPL 256


>gi|168244286|ref|ZP_02669218.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|194444973|ref|YP_002040469.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450628|ref|YP_002045214.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194403636|gb|ACF63858.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194408932|gb|ACF69151.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205336782|gb|EDZ23546.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
          Length = 321

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|168264276|ref|ZP_02686249.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|205347257|gb|EDZ33888.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
          Length = 321

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|326202623|ref|ZP_08192491.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987207|gb|EGD48035.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
          Length = 213

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 71/247 (28%), Gaps = 60/247 (24%)

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
             G    +          + +A+ LFQ  H +  +G  D++T   +        R     
Sbjct: 6   QLGYYKKAYKNDEKL--NIRNALLLFQSNHNMSVTGTYDTATKNMLVQ------RLSSNK 57

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
              +  +++     R++ VN     L   E  KV  +  V VG                 
Sbjct: 58  FAYLDNVIKAPTKGRWIAVNKTTRVLTLYEGKKVLKKYAVAVG----------------- 100

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
                                 +P  L  +  ++++   K +     DW           
Sbjct: 101 ----------------------NPATLTKSGKYVVNC--KLIDP---DWGG--GGFAKPV 131

Query: 300 QDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +     N + +  +     +    +H T           + + GC+R+ N  + +L   +
Sbjct: 132 RGGTPQNPLGTRWMGINRTDGSYGIHGTNSFYSIGK---YISHGCMRMSNYCVEELYPLV 188

Query: 357 LKDTPTW 363
               P W
Sbjct: 189 PMKAPVW 195


>gi|82543952|ref|YP_407899.1| hypothetical protein SBO_1452 [Shigella boydii Sb227]
 gi|81245363|gb|ABB66071.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 334

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                         +     G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLLPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    + F   N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|62179735|ref|YP_216152.1| hypothetical protein SC1165 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614556|ref|YP_001588521.1| hypothetical protein SPAB_02305 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553626|ref|ZP_02347374.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|62127368|gb|AAX65071.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161363920|gb|ABX67688.1| hypothetical protein SPAB_02305 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|205321976|gb|EDZ09815.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|322714205|gb|EFZ05776.1| Peptidoglycan-binding LysM [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 321

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|16764570|ref|NP_460185.1| periplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167992001|ref|ZP_02573100.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168822318|ref|ZP_02834318.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|197251546|ref|YP_002146827.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197261709|ref|ZP_03161783.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|238910965|ref|ZP_04654802.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16419733|gb|AAL20144.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197215249|gb|ACH52646.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197239964|gb|EDY22584.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|205329693|gb|EDZ16457.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205341233|gb|EDZ27997.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|261246427|emb|CBG24236.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992991|gb|ACY87876.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157756|emb|CBW17248.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912203|dbj|BAJ36177.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321223831|gb|EFX48894.1| L,D-transpeptidase YcfS [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129484|gb|ADX16914.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332988106|gb|AEF07089.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 321

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|168233093|ref|ZP_02658151.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|194472579|ref|ZP_03078563.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|198243629|ref|YP_002215923.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205353051|ref|YP_002226852.1| hypothetical protein SG1906 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857278|ref|YP_002243929.1| hypothetical protein SEN1834 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194458943|gb|EDX47782.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|197938145|gb|ACH75478.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205272832|emb|CAR37758.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205332648|gb|EDZ19412.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|206709081|emb|CAR33414.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326623671|gb|EGE30016.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628130|gb|EGE34473.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 321

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|161503528|ref|YP_001570640.1| hypothetical protein SARI_01604 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864875|gb|ABX21498.1| hypothetical protein SARI_01604 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 333

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVVVNLAELRLYYYPAGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFTQVKTGTP 229


>gi|91210891|ref|YP_540877.1| hypothetical protein UTI89_C1870 [Escherichia coli UTI89]
 gi|91072465|gb|ABE07346.1| hypothetical protein YnhG precursor [Escherichia coli UTI89]
 gi|307626836|gb|ADN71140.1| hypothetical protein UM146_08765 [Escherichia coli UM146]
          Length = 334

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQRLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|213582012|ref|ZP_03363838.1| hypothetical protein SentesTyph_12759 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 249

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TTNIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|86158711|ref|YP_465496.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775222|gb|ABC82059.1| ErfK/YbiS/YcfS/YnhG like protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 285

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 56/180 (31%), Gaps = 46/180 (25%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        ++VN+    L  +  G    +   V +G+   +TP+    +      P 
Sbjct: 77  WILPPSAAPGSIVVNLSEMRLYLLPGGGAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 136

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 137 WYPPASMRRDD---------------------------------------PTLPDRVPPG 157

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             N + +  +   +  +  +H T EP  F    R  + GCVR+   +I  L   +   TP
Sbjct: 158 PDNPLGTHALRLSAG-SILIHGTDEP--FGIG-RKFSHGCVRLYPEDIPRLFEVVPLKTP 213


>gi|120554152|ref|YP_958503.1| hypothetical protein Maqu_1226 [Marinobacter aquaeolei VT8]
 gi|120324001|gb|ABM18316.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 87

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 15/86 (17%)

Query: 78  TEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSVQRLRERLIISGDLD---------- 125
               +A Y+ +  +GGWP+LP   + L  G+    V  LR+RL+++G+L           
Sbjct: 1   MRAGLAQYRHLERQGGWPQLPNRQQSLRPGDVHEEVALLRKRLLVTGELAITHVDELAGQ 60

Query: 126 ---PSKGLSVAFDAYVESAVKLFQMR 148
               S   +  +D ++  AV+ FQ  
Sbjct: 61  SIVSSHPETYEYDEHLVDAVRRFQQH 86


>gi|320184429|gb|EFW59237.1| L,D-transpeptidase YnhG [Shigella flexneri CDC 796-83]
 gi|332096091|gb|EGJ01096.1| lysM domain protein [Shigella boydii 3594-74]
          Length = 334

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                         +     G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLLPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    + F   N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|328884589|emb|CCA57828.1| putative lipoprotein [Streptomyces venezuelae ATCC 10712]
          Length = 339

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE- 163
           G+ +  V+ L+ RL   G  D +      +     ++VK FQ + GL  +G VD++T E 
Sbjct: 137 GDETEQVRELQARLRQLGHFDRAPT--GFYGTMTAASVKAFQKKQGLPRTGSVDATTWER 194

Query: 164 ---AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
              A   P    ++    N  ++     + +  R + ++  + +L  + +GKV     V 
Sbjct: 195 LLGASRKPTADELKPSTTN--KLDTPDARCLTGRVLCISKESRTLAWMIDGKVVSSMDVR 252

Query: 221 VGRVDRQTPILHSRINRIM 239
            G  +  T      + R +
Sbjct: 253 FGSENTPTREGTFTVERKV 271


>gi|200389840|ref|ZP_03216451.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|199602285|gb|EDZ00831.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 321

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|323228042|gb|EGA12183.1| hypothetical protein SEEM0055_19941 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 248

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|323222137|gb|EGA06522.1| hypothetical protein SEEM0047_13609 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
          Length = 247

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|170076716|ref|YP_001733354.1| peptidoglycan binding protein; putative penicillin-resistant
           DD-carboxypeptidase [Synechococcus sp. PCC 7002]
 gi|169884385|gb|ACA98098.1| peptidoglycan binding protein; putative penicillin-resistant
           DD-carboxypeptidase [Synechococcus sp. PCC 7002]
          Length = 230

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 5/127 (3%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWP-ELP 98
           I+ +   +  ++     A       ++ P    +     E A +   +  +    P  LP
Sbjct: 106 ISAANLPVAEEQAPTPTASSPTTAQNETPATPAQEATDAEAAPSSSTNQTATSTDPDTLP 165

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G    SV+ L+ RL   G    +  +   F      AV   Q    LD  G+V 
Sbjct: 166 --LLKEGMEGDSVKLLQTRLQALGYY--TGRIDGIFGPNTRIAVIAAQTALKLDGDGIVG 221

Query: 159 SSTLEAM 165
           + T   +
Sbjct: 222 AQTWRKL 228



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G++   VQ L+  L + G           +D     AV  FQ    +  +G++
Sbjct: 38  PRPELRIGSTGTVVQELQTTLRLLGYYSGETT--GTYDEATVIAVYQFQKAAQIPQTGVM 95

Query: 158 DSSTLE 163
           D +T E
Sbjct: 96  DRTTWE 101


>gi|330828414|ref|YP_004391366.1| peptidoglycan-binding LysM [Aeromonas veronii B565]
 gi|328803550|gb|AEB48749.1| Peptidoglycan-binding LysM [Aeromonas veronii B565]
          Length = 308

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 69/239 (28%), Gaps = 54/239 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              +E+    FQ+  GL          +   N   D  + Q    L+  ++L+       
Sbjct: 51  GQPLEAIAAKFQL--GLTN--------MTEANPDADPLLVQTGEKLVIPQQLILPDAPRE 100

Query: 195 YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQ 252
            +++N+    L     GK V     + +G++   TP    + + R    P W     +  
Sbjct: 101 GIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKMHA 160

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +                                    +    +       G  N M    
Sbjct: 161 E-----------------------------------YAARGESLPAVWPAGPDNPMGLFA 185

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
           +          H T     F   +R  + GCVR+RN  D+  +L K  P  +R      
Sbjct: 186 LYIGKMYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDIA-YLFKQVPVGTRVQFVNQ 237


>gi|213022863|ref|ZP_03337310.1| hypothetical protein Salmonelentericaenterica_09678 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 252

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TTNIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 222


>gi|237731095|ref|ZP_04561576.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906634|gb|EEH92552.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 323

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + G        + +G++  D  TP + + I+    NP W  
Sbjct: 100 DAPREGIVINLAELRLYYYQPGTNSVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 159

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                         +       G  N
Sbjct: 160 TANIRAR-----------------------------------YKANGIDLPAVVPAGPDN 184

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 185 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|283784906|ref|YP_003364771.1| peptidoglycan-binding protein [Citrobacter rodentium ICC168]
 gi|282948360|emb|CBG87946.1| putative peptidoglycan-binding protein [Citrobacter rodentium
           ICC168]
          Length = 320

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 42/165 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG-LRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
            +    +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DVPREGIVINLAELRLYYYPPGKDSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
            M    I   +    Y +H T     F   +R  +SGC+R+R+  
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRDAD 223


>gi|320197861|gb|EFW72469.1| L,D-transpeptidase YnhG [Escherichia coli EC4100B]
          Length = 334

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSVPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|308270260|emb|CBX26872.1| hypothetical protein N47_A09010 [uncultured Desulfobacterium sp.]
          Length = 440

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 71/220 (32%), Gaps = 49/220 (22%)

Query: 176 LQVNLMRIKKLLEQKMGL---RYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTP 229
           +  N  RI   L   +     + +++N+ A  L   +        L   V +G  +R TP
Sbjct: 103 VPENGERIMLPLCFILPDAPRKGIVINLAAMRLFQFKGNSNFLTVLTYPVGIGTSERPTP 162

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +    + R M  P W +P SI +                                    +
Sbjct: 163 MGQMYVYRKMARPTWHVPASIAED-----------------------------------H 187

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
             +         PG  N +    +    ++   +H T +P          T+GC+R+   
Sbjct: 188 RKKGDPLPSFILPGPENPLGEYALYLS-KSGYLIHGTNKPSSIG---LKATNGCIRLY-P 242

Query: 350 IDLDVWLLKDTPTWSRYHI--EEVVKTRKTTPVKLATEVP 387
            D+   L K TP  +   I  +  +  ++   V L   VP
Sbjct: 243 EDI-KMLFKSTPVKTPVSIVNQPYLIGQRNGLVYLEAHVP 281


>gi|283785092|ref|YP_003364957.1| peptidoglycan-binding protein [Citrobacter rodentium ICC168]
 gi|282948546|emb|CBG88136.1| putative peptidoglycan-binding protein [Citrobacter rodentium
           ICC168]
          Length = 329

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+ +     + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYFPPGENIVQVYPIGIGLEGLETPVMETRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I ++ +                                               G  N +
Sbjct: 152 GIRKRSL-----------------------------------ERGVTLPAVVPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T +P          +SGC+R+       L   +   TP
Sbjct: 177 GRFALRLAYGNGEYLIHGTSQPDSVG---LRVSSGCIRMNAPDIKALFASVRTGTP 229


>gi|318060180|ref|ZP_07978903.1| hypothetical protein SSA3_19714 [Streptomyces sp. SA3_actG]
          Length = 235

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 4/146 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G  +  V+ L+ RL   G           F      A+  FQ   GL  SG++D++T 
Sbjct: 32  RKGQRTSDVRALQARLWSLGFFRQQPT--GFFGDVTAQALAAFQRDRGLGASGVLDAATW 89

Query: 163 EAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
             +    P   +        +   +   + +  R + V+  + +L  + +G+V     V 
Sbjct: 90  ARLRAAGPAPTKAALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVSVMDVR 149

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVI 246
            G     T     ++     +    I
Sbjct: 150 FGSAYTPTRDGTFKVYWKSRDHVSTI 175


>gi|209525179|ref|ZP_03273722.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
 gi|209494364|gb|EDZ94676.1| ErfK/YbiS/YcfS/YnhG family protein [Arthrospira maxima CS-328]
          Length = 178

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 52/170 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +  + N +V     + +GR   +TPI H ++ +++ +P W 
Sbjct: 44  WLQYSPSQLELVIRLGERRVYVMNNARVVTSYPIAIGRNGWETPIGHYQVIQMIEDPTWE 103

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++                                             PG+ 
Sbjct: 104 HP---LNGDIIP--------------------------------------------PGRD 116

Query: 306 NAMASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           N + S  I F+    N    H TP            + GCVR+ N   L 
Sbjct: 117 NPLGSHWIGFWTDGTNYIGFHGTPNEETVGQ---AVSHGCVRMFNRDVLA 163


>gi|289809529|ref|ZP_06540158.1| hypothetical protein Salmonellaentericaenterica_35902 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 182

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 34  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 93

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 94  TTNIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 118

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 119 PMGHHAIRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 158


>gi|200389916|ref|ZP_03216527.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199602361|gb|EDZ00907.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 333

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|62179965|ref|YP_216382.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62127598|gb|AAX65301.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322714432|gb|EFZ06003.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 333

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|159040579|ref|YP_001539832.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
 gi|157919414|gb|ABW00842.1| cell wall hydrolase/autolysin [Salinispora arenicola CNS-205]
          Length = 387

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 51/140 (36%), Gaps = 11/140 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G+   +V  +R  L     L PS   S  FDA+ E AV+ FQ   GL   G V +
Sbjct: 2   RPIRPGDRGPAVTEIRRVLAGLDLLVPSAPDSDEFDAHTERAVRAFQQSRGLSVDGRVGT 61

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T  A++     R R     L     + E   G     +         +E G    R+  
Sbjct: 62  ETWRALD---AARWRLGARTL--YHSVPEPLTGEDIRSLQE-----RLLEMGYDVGRADA 111

Query: 220 IVG-RVDRQTPILHSRINRI 238
           I G R  R        +  I
Sbjct: 112 IYGVRTARALAQFQREVGLI 131



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 31/104 (29%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      W  L      LG                ++ L+ERL+  G 
Sbjct: 45  RAFQQSRGLSVDGRVGTETWRALDAARWRLGARTLYHSVPEPLTGEDIRSLQERLLEMGY 104

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     +      A+  FQ   GL P G     TL ++  
Sbjct: 105 DVGRA--DAIYGVRTARALAQFQREVGLIPDGTCGPHTLNSLRR 146


>gi|254423217|ref|ZP_05036935.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
 gi|196190706|gb|EDX85670.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
          Length = 202

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 45/149 (30%), Gaps = 52/149 (34%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              LE    GK  +R  V VG+   QTPI    +  ++  P W  P +  ++D+      
Sbjct: 84  GRYLEVESLGKPTIRYEVAVGQSAWQTPIGSFEVTSMIEQPTWQHPLT--KEDI------ 135

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRN 319
                                                   PG  N +    I F+   + 
Sbjct: 136 ---------------------------------------PPGPDNPLGDRWIGFWTDGKA 156

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               H T +  L        + GCVR+RN
Sbjct: 157 QIGFHGTNQEELIGQ---AVSHGCVRMRN 182


>gi|284050198|ref|ZP_06380408.1| ErfK/YbiS/YcfS/YnhG [Arthrospira platensis str. Paraca]
          Length = 163

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 52/170 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +    N ++     + +GR   +TPI H ++ +++ +P W 
Sbjct: 29  WLQYSPSQLELVIRLGERRVYVYNNTQLVTSYPIAIGRNGWETPIGHYQVIQMIEDPIWE 88

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++                                             PG  
Sbjct: 89  HP---LNGDIIP--------------------------------------------PGGD 101

Query: 306 NAMASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           N + S  I F+    N    H TP            + GCVR+ N   L 
Sbjct: 102 NPLGSHWIGFWTDGTNYIGFHGTPNEETVGQ---AVSHGCVRMFNRDVLA 148


>gi|291569009|dbj|BAI91281.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 153

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 52/170 (30%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
            L+       +++ +    +    N ++     + +GR   +TPI H ++ +++ +P W 
Sbjct: 19  WLQYSPSQLELVIRLGERRVYVYNNTQLVTSYPIAIGRNGWETPIGHYQVIQMIEDPIWE 78

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P   +  D++                                             PG  
Sbjct: 79  HP---LNGDIIP--------------------------------------------PGGD 91

Query: 306 NAMASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           N + S  I F+    N    H TP            + GCVR+ N   L 
Sbjct: 92  NPLGSHWIGFWTDGTNYIGFHGTPNEETVGQ---AVSHGCVRMFNRDVLA 138


>gi|331646371|ref|ZP_08347474.1| putative LysM domain protein [Escherichia coli M605]
 gi|331045123|gb|EGI17250.1| putative LysM domain protein [Escherichia coli M605]
          Length = 377

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 155 DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 214

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 215 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 239

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 240 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 295

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 296 NIINTPIK 303


>gi|312971249|ref|ZP_07785427.1| lysM domain protein [Escherichia coli 1827-70]
 gi|310336451|gb|EFQ01637.1| lysM domain protein [Escherichia coli 1827-70]
          Length = 377

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 155 DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 214

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 215 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 239

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 240 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 295

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 296 NIINTPIK 303


>gi|291085508|ref|ZP_06571091.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
 gi|291071175|gb|EFE09284.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
          Length = 323

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + G        + +G++  D  TP + + ++    NP W  
Sbjct: 100 DAPREGIVINLAELRLYYYQPGTNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 159

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                         +       G  N
Sbjct: 160 TANIRAR-----------------------------------YKANGIDLPAVVPAGPDN 184

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 185 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|320664513|gb|EFX31664.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. LSU-61]
          Length = 319

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|320175139|gb|EFW50250.1| L,D-transpeptidase YnhG [Shigella dysenteriae CDC 74-1112]
          Length = 334

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                         +     G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLLPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    + F   N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRFAHGNGEYLIHGTSAPDCVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|168240884|ref|ZP_02665816.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194450901|ref|YP_002045380.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194409205|gb|ACF69424.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205339516|gb|EDZ26280.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 333

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|315287491|gb|EFU46902.1| LysM domain protein [Escherichia coli MS 110-3]
          Length = 307

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|167551660|ref|ZP_02345414.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168233565|ref|ZP_02658623.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194471756|ref|ZP_03077740.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197248056|ref|YP_002146664.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197263600|ref|ZP_03163674.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|238910809|ref|ZP_04654646.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|194458120|gb|EDX46959.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197211759|gb|ACH49156.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197241855|gb|EDY24475.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205323528|gb|EDZ11367.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205332330|gb|EDZ19094.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 333

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|293409479|ref|ZP_06653055.1| ycfS protein [Escherichia coli B354]
 gi|291469947|gb|EFF12431.1| ycfS protein [Escherichia coli B354]
          Length = 321

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 99  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 159 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 183

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 184 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 239

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 240 NIINTPIK 247


>gi|168239256|ref|ZP_02664314.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168822241|ref|ZP_02834241.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194738000|ref|YP_002114390.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204927803|ref|ZP_03219004.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|194713502|gb|ACF92723.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197287980|gb|EDY27367.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204323145|gb|EDZ08341.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205341306|gb|EDZ28070.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320086144|emb|CBY95918.1| Uncharacterized protein ynhG Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322616759|gb|EFY13668.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619981|gb|EFY16854.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622292|gb|EFY19137.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627815|gb|EFY24605.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633086|gb|EFY29829.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636668|gb|EFY33371.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641307|gb|EFY37948.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644925|gb|EFY41458.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650236|gb|EFY46650.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655811|gb|EFY52113.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322660137|gb|EFY56376.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322665297|gb|EFY61485.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669554|gb|EFY65702.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673480|gb|EFY69582.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677408|gb|EFY73472.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322679929|gb|EFY75968.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322687401|gb|EFY83373.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192354|gb|EFZ77585.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198627|gb|EFZ83728.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203108|gb|EFZ88139.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208673|gb|EFZ93611.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213812|gb|EFZ98590.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217650|gb|EGA02365.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323218998|gb|EGA03508.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227187|gb|EGA11360.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229452|gb|EGA13575.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232675|gb|EGA16771.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240287|gb|EGA24331.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242725|gb|EGA26746.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323245936|gb|EGA29924.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252513|gb|EGA36357.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255061|gb|EGA38848.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323267154|gb|EGA50639.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271522|gb|EGA54943.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 333

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|16764725|ref|NP_460340.1| hypothetical protein STM1375 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161614211|ref|YP_001588176.1| hypothetical protein SPAB_01954 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167994396|ref|ZP_02575488.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168263798|ref|ZP_02685771.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168463218|ref|ZP_02697149.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|194442385|ref|YP_002040630.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|198245212|ref|YP_002215752.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207857119|ref|YP_002243770.1| hypothetical protein SEN1670 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|16419895|gb|AAL20299.1| putative LysM domain protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161363575|gb|ABX67343.1| hypothetical protein SPAB_01954 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401048|gb|ACF61270.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|195634222|gb|EDX52574.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197939728|gb|ACH77061.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205327768|gb|EDZ14532.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205347648|gb|EDZ34279.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708922|emb|CAR33252.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246583|emb|CBG24393.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267993262|gb|ACY88147.1| hypothetical protein STM14_1669 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157910|emb|CBW17405.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912360|dbj|BAJ36334.1| hypothetical protein STMDT12_C13910 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224001|gb|EFX49064.1| L,D-transpeptidase YnhG [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323129645|gb|ADX17075.1| putative L,D-transpeptidase YnhG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326623500|gb|EGE29845.1| Peptidoglycan-binding LysM [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|332988262|gb|AEF07245.1| hypothetical protein STMUK_1341 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 333

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|288556870|ref|YP_003428805.1| peptidoglycan binding domain-containing YocH-like protein [Bacillus
           pseudofirmus OF4]
 gi|288548030|gb|ADC51913.1| peptidoglycan binding domain-containing putative YocH-like protein
           [Bacillus pseudofirmus OF4]
          Length = 356

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 14/152 (9%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           F    +     L    +H  V  E +      +      +  A            +S  T
Sbjct: 25  FASPAISEASDLGSNLLHKGVDGESVQVVQELLHEKGLLDEAAITGTFSKETFDAVS--T 82

Query: 75  IAQTEKAIAFYQDILSRG--GWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
             +         +++  G  G   +   + L  G+  V V+ L+ +L+  G  + +K   
Sbjct: 83  YQEKH-------NLVVDGIAGPQTVGAMKVLEKGDEGVLVEDLQHQLVDLGFYEGNK--D 133

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +    ++AVK FQ   G+   G+    T  
Sbjct: 134 GLYGPLTQAAVKGFQKAQGISVDGIAGPETYS 165



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G    SVQ ++E L   G LD    ++  F      AV  +Q +H L   G+    T
Sbjct: 41  LHKGVDGESVQVVQELLHEKGLLD-EAAITGTFSKETFDAVSTYQEKHNLVVDGIAGPQT 99

Query: 162 LEAMNV 167
           + AM V
Sbjct: 100 VGAMKV 105


>gi|158334425|ref|YP_001515597.1| hypothetical protein AM1_1246 [Acaryochloris marina MBIC11017]
 gi|158304666|gb|ABW26283.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 180

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 46/179 (25%), Gaps = 53/179 (29%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L   +    + +N+    +   ++ +      V +GR    TP     +     NP W+ 
Sbjct: 46  LPPAVDPMRLELNLSKRRVTVYQHDQAVKSYPVAIGRAGWATPAGDFEVKTKYRNPPWLH 105

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P                         +                                N
Sbjct: 106 PFK--------------------GYVIPGGD--------------------------PEN 119

Query: 307 AMASTKIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    + F+    N    H TP         R  + GCVR+   +I ++   +   TP
Sbjct: 120 PLGRRWMGFWTDGNNWIGFHGTPNRDSVG---RSASHGCVRMYDEDIEEMYELVAVGTP 175


>gi|157159394|ref|YP_001462346.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E24377A]
 gi|157081424|gb|ABV21132.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E24377A]
          Length = 320

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|146311284|ref|YP_001176358.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
 gi|145318160|gb|ABP60307.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
          Length = 317

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 96  DAPREGLVINLAELRLYYYPPGKKEVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 155

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 156 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 180

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 181 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 220


>gi|325132859|gb|EGC55538.1| ErfK/YbiS/YcfS/YnhG family [Neisseria meningitidis M6190]
          Length = 278

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 55/199 (27%), Gaps = 73/199 (36%)

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T +   +I    +NP W IP+SI ++                                  
Sbjct: 1   TNLGEHKIGAKAYNPVWYIPKSIQKER--------------------------------- 27

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRV 346
                  + +     G  N +    +          +H T  P          + GCVR+
Sbjct: 28  ------GDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASV---PGVRSHGCVRM 78

Query: 347 RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS----- 401
           ++   L                 + + +     V          +Y  A   +D+     
Sbjct: 79  KSPDAL--------------EFAKTIASGSPASV----------IYQMAGLNEDADRNLW 114

Query: 402 IIQFRDDIYGLDNVHVGII 420
           +  FR D YG +N+ +  +
Sbjct: 115 LAAFR-DPYGKNNLDIASL 132


>gi|261365343|ref|ZP_05978226.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
 gi|288566283|gb|EFC87843.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria mucosa ATCC 25996]
          Length = 332

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 69/231 (29%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++V++NIP   L    +G++     V VG+   QT +   +I    FNP W IP+SI ++
Sbjct: 33  QHVVINIPQQRLFLYTDGQLTKIYPVAVGKAMTQTNLGEHKIGAKAFNPTWHIPKSIQKE 92

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   G +     V      P   +F +      ++     
Sbjct: 93  ---------------------RGDGVK----SVPPGPNNPLGPVFVRLGDPKFSLG---- 123

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                    +H T  P          + GCVR+++   L                 + + 
Sbjct: 124 ---------IHGTNAPASV---PGVRSHGCVRMKSPDAL--------------EFAKTIA 157

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSI----IQFRDDIYGLDNVHVGII 420
           T     V          +Y  A   +D+     +    D Y   N+    +
Sbjct: 158 TGAPASV----------IYQLASLNEDANKNLWLAAYRDPYNKKNLDTDAL 198


>gi|26247257|ref|NP_753297.1| hypothetical protein c1387 [Escherichia coli CFT073]
 gi|26107658|gb|AAN79857.1|AE016759_131 Hypothetical protein ycfS precursor [Escherichia coli CFT073]
          Length = 377

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 155 DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 214

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 215 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 239

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 240 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 295

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 296 NIINTPIK 303


>gi|288922819|ref|ZP_06416985.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
 gi|288345834|gb|EFC80197.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
          Length = 300

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 67/263 (25%), Gaps = 80/263 (30%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P  P  L  G +   +  L+ +L+ +G           F    + AV   Q   G+   G
Sbjct: 99  PTGPPILRPGATGPEILELQRQLMTAGYWL--GTPDGTFGLLTQQAVLAVQKTAGIGLDG 156

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +V  +T  A+   V    R  Q                  + V+     L+ V +G V  
Sbjct: 157 LVGPATRAAIARGVRPDARSTQ---------------GFVLEVDKGRQLLKIVRDGHVET 201

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
                 G                                                I+  D
Sbjct: 202 TLNTSTGTE---------------------------------------------QIYYHD 216

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMAS-TKIEFYSRNNTYMHDTPEPILFN 333
                       W         FRQ  G    ++    + +++  +   +H         
Sbjct: 217 GVQYLADTPPGTWRM-------FRQVNGVDHGSLGDLYRPKYFHADGIAIHGYAS----- 264

Query: 334 NVVRFETSGCVRVRNIIDLDVWL 356
              R  + GCVRV N      WL
Sbjct: 265 VPARAASHGCVRVTNAA--MDWL 285


>gi|288549505|ref|ZP_05967273.2| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288318218|gb|EFC57156.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 323

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 48/163 (29%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 100 DAPREGIVINLAELRLYYYPPGKNEVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 159

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 160 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 184

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 185 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 224


>gi|307826384|ref|ZP_07656586.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307732561|gb|EFO03436.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 354

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 68/252 (26%), Gaps = 74/252 (29%)

Query: 174 RQLQVNLMRIKKLLE-------------QKMGLRYVLVNIPAASLEAVENGK------VG 214
             +++N    + L++                    + +NI    +      K        
Sbjct: 67  EIVRLNPDVDRWLVKKDEIVRLSNRRILPDSPHNGITLNISEYRMYYYPPTKKGQAPQQV 126

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           +     VGR D +TP+  +++ R + NP W  P SI ++                     
Sbjct: 127 MSYAHGVGRQDWKTPLGKTKVARKIMNPEWHPPESIRRE--------------------- 165

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
                         ++            G  N + +  +         +H T    +   
Sbjct: 166 --------------HAANGDPLPVVVPAGPHNPLGTRALYLDLPGEYRIHGTDIDKINGI 211

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV----HF 390
            +   T GCVR+                     I ++V       + +   + V    + 
Sbjct: 212 GM-QITHGCVRMY--------------PKDVEEIYDLVSVGTPVYI-VKQPIKVGWLDNV 255

Query: 391 VYISAWSPKDSI 402
           +Y+ A    +  
Sbjct: 256 LYVEAHPDLEGE 267


>gi|323190465|gb|EFZ75739.1| lysM domain protein [Escherichia coli RN587/1]
          Length = 319

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPSWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|301328513|ref|ZP_07221579.1| LysM domain protein [Escherichia coli MS 78-1]
 gi|300845120|gb|EFK72880.1| LysM domain protein [Escherichia coli MS 78-1]
          Length = 304

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|91210268|ref|YP_540254.1| hypothetical protein UTI89_C1241 [Escherichia coli UTI89]
 gi|117623298|ref|YP_852211.1| hypothetical protein APECO1_194 [Escherichia coli APEC O1]
 gi|218557994|ref|YP_002390907.1| hypothetical protein ECS88_1127 [Escherichia coli S88]
 gi|237706901|ref|ZP_04537382.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91071842|gb|ABE06723.1| hypothetical protein UTI89_C1241 [Escherichia coli UTI89]
 gi|115512422|gb|ABJ00497.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|218364763|emb|CAR02453.1| conserved hypothetical protein [Escherichia coli S88]
 gi|226898111|gb|EEH84370.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294490390|gb|ADE89146.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           IHE3034]
          Length = 320

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|315291029|gb|EFU50392.1| LysM domain protein [Escherichia coli MS 153-1]
          Length = 306

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|110641289|ref|YP_669019.1| hypothetical protein ECP_1105 [Escherichia coli 536]
 gi|191173052|ref|ZP_03034585.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300982405|ref|ZP_07176103.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|306814037|ref|ZP_07448210.1| hypothetical protein ECNC101_18404 [Escherichia coli NC101]
 gi|110342881|gb|ABG69118.1| hypothetical protein YcfS precursor [Escherichia coli 536]
 gi|190906597|gb|EDV66203.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           F11]
 gi|300307242|gb|EFJ61762.1| LysM domain protein [Escherichia coli MS 200-1]
 gi|305852674|gb|EFM53122.1| hypothetical protein ECNC101_18404 [Escherichia coli NC101]
 gi|307627416|gb|ADN71720.1| hypothetical protein UM146_11755 [Escherichia coli UM146]
 gi|323953200|gb|EGB49066.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323957939|gb|EGB53651.1| ykud domain-containing protein [Escherichia coli H263]
 gi|324005971|gb|EGB75190.1| LysM domain protein [Escherichia coli MS 57-2]
 gi|324013203|gb|EGB82422.1| LysM domain protein [Escherichia coli MS 60-1]
          Length = 319

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|220908597|ref|YP_002483908.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
 gi|219865208|gb|ACL45547.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7425]
          Length = 204

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 39/150 (26%), Gaps = 53/150 (35%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +   ++ +V     V VG+   +TP    R+   + NP +  P +            
Sbjct: 84  QRRVYLYQDDQVAASYPVAVGKPGWETPTGKFRVMHKVVNPVFENPFN------------ 131

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSR 318
                                                   PG  N +    I F    ++
Sbjct: 132 -----------------------------------GVVTPPGPGNPLGDRLIVFAKVGNK 156

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                H T    L        + GCVR++N
Sbjct: 157 GYAGFHGTTNEALIGQ---AVSHGCVRMKN 183


>gi|145597090|ref|YP_001161387.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
 gi|145306427|gb|ABP57009.1| cell wall hydrolase/autolysin [Salinispora tropica CNB-440]
          Length = 392

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 11/137 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G+   +V  +R+ L     L P+   S  FDA+ E AV+ FQ   GL   G V +
Sbjct: 2   RPIRPGDRGPAVTEIRKVLAGLDLLVPAAPDSDEFDAHTERAVRAFQQSRGLSVDGRVGT 61

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T +A++     R R     L     + E  +G     +         +E G    R+  
Sbjct: 62  ETWQALD---AARWRLGARTL--YHSVPEPLIGEDIRSLQE-----RLLEMGYDVGRADA 111

Query: 220 IVG-RVDRQTPILHSRI 235
           I G R  R        +
Sbjct: 112 IYGVRTARALAQFQREV 128



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      W  L      LG                ++ L+ERL+  G 
Sbjct: 45  RAFQQSRGLSVDGRVGTETWQALDAARWRLGARTLYHSVPEPLIGEDIRSLQERLLEMGY 104

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     +      A+  FQ   GL P G     T+ ++  
Sbjct: 105 --DVGRADAIYGVRTARALAQFQREVGLAPDGTCGPHTVNSLRR 146


>gi|215486324|ref|YP_002328755.1| hypothetical protein E2348C_1205 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264396|emb|CAS08753.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|281178223|dbj|BAI54553.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 320

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|78224173|ref|YP_385920.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
 gi|78195428|gb|ABB33195.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
          Length = 300

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 50/169 (29%), Gaps = 47/169 (27%)

Query: 197 LVNIPAASLEAVENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           +VN+    L  V  G         V  G   ++TP+   R+     NP W +P SI Q+ 
Sbjct: 106 VVNLSELRLYFVPEGGTPRIVSFPVGTGSEGKETPLGVYRVTEKRANPAWHVPLSIRQER 165

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                  P       PG  N + S  + 
Sbjct: 166 ---------------------------------------PRLPAVVPPGPDNPLGSHALR 186

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +   +H T  P       R  + GC+R+   +I  L   +   TP
Sbjct: 187 LT-DDGLMIHGTNRPWGVG---RNVSHGCIRLYPEDIPVLFRLVSLGTP 231


>gi|254161219|ref|YP_003044327.1| hypothetical protein ECB_01109 [Escherichia coli B str. REL606]
 gi|242376915|emb|CAQ31634.1| L,D-transpeptidase YcfS [Escherichia coli BL21(DE3)]
 gi|253973120|gb|ACT38791.1| hypothetical protein ECB_01109 [Escherichia coli B str. REL606]
 gi|253977334|gb|ACT43004.1| hypothetical protein ECD_01109 [Escherichia coli BL21(DE3)]
          Length = 320

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|312968808|ref|ZP_07783015.1| lysM domain protein [Escherichia coli 2362-75]
 gi|331657176|ref|ZP_08358138.1| putative LysM domain protein [Escherichia coli TA206]
 gi|222032866|emb|CAP75605.1| Uncharacterized protein ycfS [Escherichia coli LF82]
 gi|312286210|gb|EFR14123.1| lysM domain protein [Escherichia coli 2362-75]
 gi|312945675|gb|ADR26502.1| hypothetical protein NRG857_05370 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|330910929|gb|EGH39439.1| l,D-transpeptidase YcfS [Escherichia coli AA86]
 gi|331055424|gb|EGI27433.1| putative LysM domain protein [Escherichia coli TA206]
          Length = 319

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|301059524|ref|ZP_07200437.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2]
 gi|300446419|gb|EFK10271.1| putative Protein ErfK/srfK [delta proteobacterium NaphS2]
          Length = 259

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 50/175 (28%), Gaps = 51/175 (29%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFN 241
           + +L ++   R +++N+    L    N          V +G  D  TP     +     N
Sbjct: 53  QWILPER-NFRGIVINVAELRLYYYFNDGCPRVMTFPVGIGDRDWPTPAGRFTVREKRVN 111

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W IP S+ +K  +  +                                          
Sbjct: 112 PTWFIPPSLREKYQVRSI-----------------------------------------P 130

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           PG  N +    I   +      H T  P       R  T GC+R+   +I  L  
Sbjct: 131 PGPDNPLGRYWIGIGNDYGI--HGTDLPWSVG---RLVTRGCIRLYPEDIEQLFK 180


>gi|222053246|ref|YP_002535608.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
 gi|221562535|gb|ACM18507.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. FRC-32]
          Length = 439

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 44/170 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               + ++VN+    L   +      V     V +G  +R TP+    + R +  P W +
Sbjct: 121 DAPRKGIVVNLATMRLFHYKGDNNALVVTTYPVGIGTKERPTPMGQMFVQRKVSRPTWYV 180

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI +                                    +  +      R  PG +N
Sbjct: 181 PASIAED-----------------------------------HRKKGDPLPARVPPGPLN 205

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            +    +      +  +H T +P          ++GC+R+   N+  L  
Sbjct: 206 PLGECALYLSKP-SYLIHGTNKPASIG---LNASNGCLRLYPENVKMLYD 251


>gi|315296618|gb|EFU55913.1| LysM domain protein [Escherichia coli MS 16-3]
          Length = 319

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|197121993|ref|YP_002133944.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
 gi|196171842|gb|ACG72815.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
          Length = 284

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 56/180 (31%), Gaps = 46/180 (25%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +L        V+VN+    L  +  G    +   V +G+   +TP+    +      P 
Sbjct: 76  WILPPSAAPGSVVVNLSEMRLYLLPGGDAAPVTYPVGIGKDRAKTPLGSFTVIGKTVAPT 135

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P S+ + D                                       P    R  PG
Sbjct: 136 WYPPASMRRDD---------------------------------------PTLPDRVPPG 156

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             N + +  +   +  +  +H T EP  F    R  + GCVR+   +I  L   +   TP
Sbjct: 157 PDNPLGTHALRLSAG-SILIHGTDEP--FGIG-RKFSHGCVRLYPEDIPRLFEVVPLKTP 212


>gi|194439722|ref|ZP_03071791.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|253773864|ref|YP_003036695.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300928332|ref|ZP_07143867.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|194421341|gb|EDX37359.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           101-1]
 gi|253324908|gb|ACT29510.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|300463664|gb|EFK27157.1| LysM domain protein [Escherichia coli MS 187-1]
 gi|323962712|gb|EGB58290.1| ykud domain-containing protein [Escherichia coli H489]
 gi|323973297|gb|EGB68486.1| ykud domain-containing protein [Escherichia coli TA007]
 gi|332342662|gb|AEE55996.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 319

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|170681577|ref|YP_001744065.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli SMS-3-5]
 gi|300938684|ref|ZP_07153408.1| LysM domain protein [Escherichia coli MS 21-1]
 gi|170519295|gb|ACB17473.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           SMS-3-5]
 gi|300456329|gb|EFK19822.1| LysM domain protein [Escherichia coli MS 21-1]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|56413653|ref|YP_150728.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362577|ref|YP_002142214.1| LysM domain [Salmonella enterica subsp. enterica serovar Paratyphi
           A str. AKU_12601]
 gi|56127910|gb|AAV77416.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094054|emb|CAR59552.1| putative LysM domain [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 333

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMDTRIGQKIPNPMWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|224584113|ref|YP_002637911.1| LysM domain protein [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468640|gb|ACN46470.1| putative LysM domain protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 333

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 51/176 (28%), Gaps = 42/176 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                 V+VN+    L     G+  ++   + +G    +TP++ +RI + + NP W    
Sbjct: 92  DAPREGVIVNLAELRLYYYPPGENRVQVYPIGIGLQGLETPVMGTRIGQKIPNPTWTPTA 151

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I Q+ +                                               G  N +
Sbjct: 152 GIRQRSL-----------------------------------ERGITLPPVIPAGPNNPL 176

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 177 GRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 229


>gi|291282133|ref|YP_003498951.1| hypothetical protein G2583_1373 [Escherichia coli O55:H7 str.
           CB9615]
 gi|209773014|gb|ACI84819.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|290762006|gb|ADD55967.1| hypothetical protein G2583_1373 [Escherichia coli O55:H7 str.
           CB9615]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|218689065|ref|YP_002397277.1| hypothetical protein ECED1_1256 [Escherichia coli ED1a]
 gi|218426629|emb|CAR07457.1| conserved hypothetical protein [Escherichia coli ED1a]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|82777274|ref|YP_403623.1| hypothetical protein SDY_2037 [Shigella dysenteriae Sd197]
 gi|331652165|ref|ZP_08353184.1| putative LysM domain protein [Escherichia coli M718]
 gi|81241422|gb|ABB62132.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|331050443|gb|EGI22501.1| putative LysM domain protein [Escherichia coli M718]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|309788185|ref|ZP_07682791.1| lysM domain protein [Shigella dysenteriae 1617]
 gi|308924037|gb|EFP69538.1| lysM domain protein [Shigella dysenteriae 1617]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|227886530|ref|ZP_04004335.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300974585|ref|ZP_07172646.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|301051098|ref|ZP_07197932.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|227836734|gb|EEJ47200.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300297270|gb|EFJ53655.1| LysM domain protein [Escherichia coli MS 185-1]
 gi|300410527|gb|EFJ94065.1| LysM domain protein [Escherichia coli MS 45-1]
 gi|307553114|gb|ADN45889.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           ABU 83972]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|110805127|ref|YP_688647.1| hypothetical protein SFV_1133 [Shigella flexneri 5 str. 8401]
 gi|110614675|gb|ABF03342.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281600529|gb|ADA73513.1| hypothetical protein SFxv_1270 [Shigella flexneri 2002017]
          Length = 321

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 99  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 159 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 183

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 184 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 239

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 240 NIINTPIK 247


>gi|320659378|gb|EFX26947.1| hypothetical protein ECO5905_20078 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|209918369|ref|YP_002292453.1| hypothetical protein ECSE_1178 [Escherichia coli SE11]
 gi|209911628|dbj|BAG76702.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|284920938|emb|CBG34001.1| putative peptidoglycan-binding protein [Escherichia coli 042]
          Length = 321

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 99  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 159 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 183

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 184 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 239

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 240 NIINTPIK 247


>gi|295096070|emb|CBK85160.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 337

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 64/218 (29%), Gaps = 50/218 (22%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D  ++S  + F     L       ++T+  +N      I            +L       
Sbjct: 48  DNKLQSIARRFNTAAQLILE---TNNTIAPVNPAPGTVITIPSQ-------MLLPDTERE 97

Query: 195 YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++VN+    L     G+ +     + +G++  +TP+  +R+++ + NP W     I  +
Sbjct: 98  GIVVNLAELRLYFYPPGENIVQVYPLGIGQLGLETPVSTTRVSQKIPNPTWTPTAGIRAR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            +                                    +          G  N +    +
Sbjct: 158 SLA-----------------------------------QGIKLPPVVPAGPNNPLGRFAL 182

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                N  Y +H T  P          +SGC+R+    
Sbjct: 183 RLGIGNGEYLIHGTSAPDSVG---LRVSSGCMRMNAPD 217


>gi|30062646|ref|NP_836817.1| hypothetical protein S1197 [Shigella flexneri 2a str. 2457T]
 gi|56479826|ref|NP_707028.2| hypothetical protein SF1117 [Shigella flexneri 2a str. 301]
 gi|30040892|gb|AAP16623.1| hypothetical protein S1197 [Shigella flexneri 2a str. 2457T]
 gi|56383377|gb|AAN42735.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|332767335|gb|EGJ97529.1| putative L,D-transpeptidase YcfS [Shigella flexneri 2930-71]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|15801230|ref|NP_287247.1| hypothetical protein Z1752 [Escherichia coli O157:H7 EDL933]
 gi|15830745|ref|NP_309518.1| hypothetical protein ECs1491 [Escherichia coli O157:H7 str. Sakai]
 gi|157160640|ref|YP_001457958.1| LysM/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli HS]
 gi|170080764|ref|YP_001730084.1| hypothetical protein ECDH10B_1185 [Escherichia coli str. K-12
           substr. DH10B]
 gi|188496367|ref|ZP_03003637.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|218553690|ref|YP_002386603.1| hypothetical protein ECIAI1_1150 [Escherichia coli IAI1]
 gi|218694646|ref|YP_002402313.1| hypothetical protein EC55989_1225 [Escherichia coli 55989]
 gi|238900367|ref|YP_002926163.1| hypothetical protein BWG_0961 [Escherichia coli BW2952]
 gi|254792496|ref|YP_003077333.1| hypothetical protein ECSP_1415 [Escherichia coli O157:H7 str.
           TW14359]
 gi|260843353|ref|YP_003221131.1| hypothetical protein ECO103_1158 [Escherichia coli O103:H2 str.
           12009]
 gi|260854596|ref|YP_003228487.1| hypothetical protein ECO26_1446 [Escherichia coli O26:H11 str.
           11368]
 gi|260867475|ref|YP_003233877.1| hypothetical protein ECO111_1390 [Escherichia coli O111:H- str.
           11128]
 gi|293414406|ref|ZP_06657055.1| ycfS protein [Escherichia coli B185]
 gi|293433402|ref|ZP_06661830.1| ycfS protein [Escherichia coli B088]
 gi|331641656|ref|ZP_08342791.1| putative LysM domain protein [Escherichia coli H736]
 gi|331662524|ref|ZP_08363447.1| putative LysM domain protein [Escherichia coli TA143]
 gi|331667513|ref|ZP_08368377.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331672628|ref|ZP_08373417.1| putative LysM domain protein [Escherichia coli TA280]
 gi|331676905|ref|ZP_08377601.1| putative LysM domain protein [Escherichia coli H591]
 gi|331682619|ref|ZP_08383238.1| putative LysM domain protein [Escherichia coli H299]
 gi|332279699|ref|ZP_08392112.1| conserved hypothetical protein [Shigella sp. D9]
 gi|12514663|gb|AAG55859.1|AE005321_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360955|dbj|BAB34914.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|157066320|gb|ABV05575.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           HS]
 gi|169888599|gb|ACB02306.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188491566|gb|EDU66669.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           53638]
 gi|209773008|gb|ACI84816.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773010|gb|ACI84817.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773012|gb|ACI84818.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|209773016|gb|ACI84820.1| hypothetical protein ECs1491 [Escherichia coli]
 gi|218351378|emb|CAU97084.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218360458|emb|CAQ98012.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|238860297|gb|ACR62295.1| conserved protein [Escherichia coli BW2952]
 gi|254591896|gb|ACT71257.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|257753245|dbj|BAI24747.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758500|dbj|BAI29997.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|257763831|dbj|BAI35326.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|291324221|gb|EFE63643.1| ycfS protein [Escherichia coli B088]
 gi|291434464|gb|EFF07437.1| ycfS protein [Escherichia coli B185]
 gi|309701384|emb|CBJ00685.1| putative peptidoglycan-binding protein [Escherichia coli ETEC
           H10407]
 gi|323937853|gb|EGB34117.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942582|gb|EGB38749.1| ykud domain-containing protein [Escherichia coli E482]
 gi|324117316|gb|EGC11223.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331038454|gb|EGI10674.1| putative LysM domain protein [Escherichia coli H736]
 gi|331060946|gb|EGI32910.1| putative LysM domain protein [Escherichia coli TA143]
 gi|331065098|gb|EGI36993.1| putative LysM domain protein [Escherichia coli TA271]
 gi|331070271|gb|EGI41637.1| putative LysM domain protein [Escherichia coli TA280]
 gi|331075594|gb|EGI46892.1| putative LysM domain protein [Escherichia coli H591]
 gi|331080250|gb|EGI51429.1| putative LysM domain protein [Escherichia coli H299]
 gi|332102051|gb|EGJ05397.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|218704524|ref|YP_002412043.1| hypothetical protein ECUMN_1291 [Escherichia coli UMN026]
 gi|293404402|ref|ZP_06648396.1| L,D-transpeptidase YcfS [Escherichia coli FVEC1412]
 gi|298380179|ref|ZP_06989784.1| ycfS protein [Escherichia coli FVEC1302]
 gi|218431621|emb|CAR12500.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|291428988|gb|EFF02013.1| L,D-transpeptidase YcfS [Escherichia coli FVEC1412]
 gi|298279877|gb|EFI21385.1| ycfS protein [Escherichia coli FVEC1302]
          Length = 320

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRMAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|313650431|gb|EFS14838.1| lysM domain protein [Shigella flexneri 2a str. 2457T]
 gi|332758276|gb|EGJ88599.1| lysM domain protein [Shigella flexneri 4343-70]
 gi|332761053|gb|EGJ91340.1| lysM domain protein [Shigella flexneri K-671]
 gi|333005662|gb|EGK25180.1| lysM domain protein [Shigella flexneri K-218]
 gi|333019353|gb|EGK38636.1| lysM domain protein [Shigella flexneri K-304]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|300896876|ref|ZP_07115366.1| LysM domain protein [Escherichia coli MS 198-1]
 gi|300359283|gb|EFJ75153.1| LysM domain protein [Escherichia coli MS 198-1]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRMAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|320197560|gb|EFW72173.1| L,D-transpeptidase YcfS [Escherichia coli WV_060327]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|170020492|ref|YP_001725446.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|187776311|ref|ZP_02801799.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188025150|ref|ZP_02776359.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|189010664|ref|ZP_02808490.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189402503|ref|ZP_02782835.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189403583|ref|ZP_02796346.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189404503|ref|ZP_02789897.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189405395|ref|ZP_02815098.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189406283|ref|ZP_02827509.2| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC508]
 gi|193066279|ref|ZP_03047330.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E22]
 gi|193070913|ref|ZP_03051844.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|194429794|ref|ZP_03062308.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B171]
 gi|195938872|ref|ZP_03084254.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808997|ref|ZP_03251334.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208816343|ref|ZP_03257522.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208822587|ref|ZP_03262906.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209398807|ref|YP_002269958.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327994|ref|ZP_03444076.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|256018631|ref|ZP_05432496.1| hypothetical protein ShiD9_06934 [Shigella sp. D9]
 gi|256023189|ref|ZP_05437054.1| hypothetical protein E4_07444 [Escherichia sp. 4_1_40B]
 gi|261256217|ref|ZP_05948750.1| hypothetical protein EscherichiacoliO157EcO_10354 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|300821106|ref|ZP_07101255.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300902507|ref|ZP_07120487.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300917884|ref|ZP_07134517.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|300922642|ref|ZP_07138739.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300948703|ref|ZP_07162780.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300956221|ref|ZP_07168533.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|301023323|ref|ZP_07187116.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|301029580|ref|ZP_07192658.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|301305648|ref|ZP_07211737.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|301644529|ref|ZP_07244522.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|307137748|ref|ZP_07497104.1| hypothetical protein EcolH7_06395 [Escherichia coli H736]
 gi|307310110|ref|ZP_07589760.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|309796543|ref|ZP_07690950.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|169755420|gb|ACA78119.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|187767857|gb|EDU31701.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4196]
 gi|188014622|gb|EDU52744.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4113]
 gi|188999155|gb|EDU68141.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4076]
 gi|189355237|gb|EDU73656.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4401]
 gi|189359863|gb|EDU78282.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4486]
 gi|189365188|gb|EDU83604.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4501]
 gi|189370390|gb|EDU88806.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC869]
 gi|189375507|gb|EDU93923.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC508]
 gi|192926051|gb|EDV80694.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E22]
 gi|192955767|gb|EDV86239.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           E110019]
 gi|194412141|gb|EDX28449.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B171]
 gi|208728798|gb|EDZ78399.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732991|gb|EDZ81679.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738072|gb|EDZ85755.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160207|gb|ACI37640.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. EC4115]
 gi|217318421|gb|EEC26847.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. TW14588]
 gi|260449748|gb|ACX40170.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|299877575|gb|EFI85786.1| LysM domain protein [Escherichia coli MS 196-1]
 gi|300316949|gb|EFJ66733.1| LysM domain protein [Escherichia coli MS 175-1]
 gi|300397048|gb|EFJ80586.1| LysM domain protein [Escherichia coli MS 69-1]
 gi|300405408|gb|EFJ88946.1| LysM domain protein [Escherichia coli MS 84-1]
 gi|300414874|gb|EFJ98184.1| LysM domain protein [Escherichia coli MS 115-1]
 gi|300420991|gb|EFK04302.1| LysM domain protein [Escherichia coli MS 182-1]
 gi|300451797|gb|EFK15417.1| LysM domain protein [Escherichia coli MS 116-1]
 gi|300526405|gb|EFK47474.1| LysM domain protein [Escherichia coli MS 119-7]
 gi|300839076|gb|EFK66836.1| LysM domain protein [Escherichia coli MS 124-1]
 gi|301077111|gb|EFK91917.1| LysM domain protein [Escherichia coli MS 146-1]
 gi|306909828|gb|EFN40322.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|308119855|gb|EFO57117.1| LysM domain protein [Escherichia coli MS 145-7]
 gi|315060390|gb|ADT74717.1| L,D-transpeptidase linking LPP to murein [Escherichia coli W]
 gi|315135745|dbj|BAJ42904.1| hypothetical protein ECDH1ME8569_1048 [Escherichia coli DH1]
 gi|315253013|gb|EFU32981.1| LysM domain protein [Escherichia coli MS 85-1]
 gi|315618285|gb|EFU98875.1| lysM domain protein [Escherichia coli 3431]
 gi|320188120|gb|EFW62785.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. EC1212]
 gi|320201008|gb|EFW75592.1| L,D-transpeptidase YcfS [Escherichia coli EC4100B]
 gi|320637564|gb|EFX07364.1| hypothetical protein ECO5101_10667 [Escherichia coli O157:H7 str.
           G5101]
 gi|320643125|gb|EFX12326.1| hypothetical protein ECO9389_04146 [Escherichia coli O157:H- str.
           493-89]
 gi|320648583|gb|EFX17238.1| hypothetical protein ECO2687_20261 [Escherichia coli O157:H- str. H
           2687]
 gi|323156750|gb|EFZ42886.1| lysM domain protein [Escherichia coli EPECa14]
 gi|323163657|gb|EFZ49479.1| lysM domain protein [Escherichia coli E128010]
 gi|323175268|gb|EFZ60881.1| lysM domain protein [Escherichia coli LT-68]
 gi|323175655|gb|EFZ61249.1| lysM domain protein [Escherichia coli 1180]
 gi|323185764|gb|EFZ71125.1| lysM domain protein [Escherichia coli 1357]
 gi|323379050|gb|ADX51318.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|324017495|gb|EGB86714.1| LysM domain protein [Escherichia coli MS 117-3]
 gi|326339336|gb|EGD63150.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. 1125]
 gi|326340417|gb|EGD64220.1| L,D-transpeptidase YcfS [Escherichia coli O157:H7 str. 1044]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|320653897|gb|EFX21971.1| hypothetical protein ECO7815_16598 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|323169990|gb|EFZ55646.1| lysM domain protein [Escherichia coli LT-68]
          Length = 339

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 47/185 (25%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVG-----RVDRQTPILHSRINRIM 239
           LL      + ++VN+    L     G+ +     + +G         +TP++ +R+ + +
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPGLETPVMETRVGQKI 147

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W     I Q+ +                                            
Sbjct: 148 PNPTWTPTAGIRQRSL-----------------------------------ERGIKLPPV 172

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
              G  N +    +     N  Y +H T  P          +SGC+R+       L   +
Sbjct: 173 VPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSV 229

Query: 357 LKDTP 361
              TP
Sbjct: 230 RTGTP 234


>gi|307153544|ref|YP_003888928.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7822]
 gi|306983772|gb|ADN15653.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanothece sp. PCC 7822]
          Length = 216

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 56/202 (27%), Gaps = 59/202 (29%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNL---MRIKKLLEQKMGLR----YVLVNIPAASLEAVEN 210
               +  +   ++  ++Q+            + E +   +     +++ +    +   + 
Sbjct: 47  GQDQINPIQETIEAPVQQIPTEAPPGDDGTGVTEPEAPPQVIETRLILKLKERRVYIYQG 106

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +      V VG+   +TP    ++ +++ NP W  P                       
Sbjct: 107 DQQVAMYPVAVGKKGWETPTGDFQVLQMVPNPIWQNPW---------------------- 144

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTYMHDTPE 328
                  G  +                     G  N +    I F+   +N    H T  
Sbjct: 145 ------NGSIIP-------------------AGPRNPLGERWIGFWTDGKNYIGFHGTQA 179

Query: 329 PILFNNVVRFETSGCVRVRNII 350
             L        + GCVR+RN  
Sbjct: 180 EHLMGQ---AVSHGCVRMRNSD 198


>gi|261226983|ref|ZP_05941264.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           O157:H7 str. FRIK2000]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|191168573|ref|ZP_03030357.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
 gi|190901367|gb|EDV61132.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           B7A]
          Length = 319

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|119493485|ref|ZP_01624152.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
 gi|119452668|gb|EAW33848.1| Peptidoglycan-binding domain 1 protein [Lyngbya sp. PCC 8106]
          Length = 612

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 68/203 (33%), Gaps = 19/203 (9%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID------SDIPII---SKE 73
            + L +      V D           N     F   +           + IP     S+E
Sbjct: 139 AIGLGQGDQGPGVTDLQTRLRQLGYFNTSPTGFFGSITQNAVIRFQQANLIPATGLVSEE 198

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           T+      +         G    LP   L  G++  +V  L++RL   G  D    ++  
Sbjct: 199 TLVFLNNRVPTL-----PGNPTPLPSGVLQQGDTGPAVGVLQQRLFRLGFYDGE--ITNY 251

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FDA  E AV  FQ  + + P+G V  +T+  +       I  +    +    L   ++G 
Sbjct: 252 FDARTEQAVIRFQQAYRIQPTGQVGPTTVSYLISATGEGIPSIPTTPVANPSLP-LRLGD 310

Query: 194 RYVLVNIPAASLEA--VENGKVG 214
           R   V++    L      NG V 
Sbjct: 311 RGTSVSLVQQRLRVLGYYNGSVN 333



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 84/230 (36%), Gaps = 39/230 (16%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L    +        +      +    F       D  I +     +++ + + ++A   Y
Sbjct: 217 LPSGVLQQGDTGPAVGVLQQRLFRLGFY------DGEITNYFDARTEQAVIRFQQA---Y 267

Query: 86  QD--------------ILSRG-GWPELPIRP-------LHLGNSSVSVQRLRERLIISGD 123
           +               I + G G P +P  P       L LG+   SV  +++RL + G 
Sbjct: 268 RIQPTGQVGPTTVSYLISATGEGIPSIPTTPVANPSLPLRLGDRGTSVSLVQQRLRVLGY 327

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
              +  ++  FD     AV  FQ  +G+  +G+V ++T ++  +    +++   ++ +  
Sbjct: 328 Y--NGSVNGIFDLTTRRAVLAFQQDYGISQTGVVGATT-QSYLISAVPQVQPRVISQVSN 384

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS---TVIVGRVDRQTPI 230
             + + +       VN P   L A   G+    +    V  GR    +P+
Sbjct: 385 FGIPQGRPIGGIAPVNQPVNPLIA--QGRPFNPTPFAPVPQGRPMNVSPL 432



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G+    V  +++ L   G    +  ++  +      AV  FQ  +GL   G+V 
Sbjct: 58  AQLITQGSRGAEVSAIQQSLQSLGFF--NATVTGYYGPITRDAVIRFQQANGLSADGVVG 115

Query: 159 SSTLEAMN 166
            +TL A+ 
Sbjct: 116 PNTLAALG 123



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 66/219 (30%), Gaps = 30/219 (13%)

Query: 10  ILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPI 69
            L    +   L +  S V + I        ++    S+ +  F N             PI
Sbjct: 40  FLSLAVLTTALTLPQSAVAQLITQGSRGAEVSAIQQSLQSLGFFNATVTG-----YYGPI 94

Query: 70  ISKETIAQTEK------------AIAFYQDILSRGGWPELPIRP----LHLGNSSVSVQR 113
                I   +              +A    + +       P+      L  G+    V  
Sbjct: 95  TRDAVIRFQQANGLSADGVVGPNTLAAL-GLATNPNPEPPPLGRAAIGLGQGDQGPGVTD 153

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L+ RL   G  + S      F +  ++AV  FQ  + +  +G+V   TL  +N     R+
Sbjct: 154 LQTRLRQLGYFNTSPT--GFFGSITQNAVIRFQQANLIPATGLVSEETLVFLN----NRV 207

Query: 174 RQLQVNLMRIKK--LLEQKMGLRYVLVNIPAASLEAVEN 210
             L  N   +    L +   G    ++      L   + 
Sbjct: 208 PTLPGNPTPLPSGVLQQGDTGPAVGVLQQRLFRLGFYDG 246



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G++   V+++++RL           ++  FD   + AV  FQ  +G+  +G+V  +T  
Sbjct: 447 VGDTGFEVRKVQQRLRDLNYY--RGPINGFFDRTTQDAVVRFQRSNGITQTGVVGPTTRI 504

Query: 164 AMNVPVD 170
            M     
Sbjct: 505 YMFNSAQ 511



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            LG +S  VQ L++RL + G       +   ++   E+AV   Q  +G   + ++
Sbjct: 553 RLGTAS--VQELQKRLQVQGLY--EGPIDGVYNPQTEAAVNQAQEVYGSSANDVL 603


>gi|332092852|gb|EGI97920.1| hypothetical protein SD15574_2037 [Shigella dysenteriae 155-74]
          Length = 273

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 51  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 110

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 111 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 135

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 136 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 191

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 192 NIINTPIK 199


>gi|74311674|ref|YP_310093.1| hypothetical protein SSON_1133 [Shigella sonnei Ss046]
 gi|73855151|gb|AAZ87858.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323165622|gb|EFZ51409.1| lysM domain protein [Shigella sonnei 53G]
          Length = 272

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 50  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 109

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 110 TANIRAR-----------------------------------YKAQGIELPTVVPAGPDN 134

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 135 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 190

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 191 NIINTPIK 198


>gi|320179185|gb|EFW54143.1| L,D-transpeptidase YcfS [Shigella boydii ATCC 9905]
          Length = 273

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 51  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 110

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 111 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 135

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 136 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 191

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 192 NIINTPIK 199


>gi|218700385|ref|YP_002408014.1| hypothetical protein ECIAI39_2047 [Escherichia coli IAI39]
 gi|218370371|emb|CAR18174.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 320

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|157146185|ref|YP_001453504.1| hypothetical protein CKO_01941 [Citrobacter koseri ATCC BAA-895]
 gi|157083390|gb|ABV13068.1| hypothetical protein CKO_01941 [Citrobacter koseri ATCC BAA-895]
          Length = 322

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 99  DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 159 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 183

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 184 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 223


>gi|300816815|ref|ZP_07097035.1| LysM domain protein [Escherichia coli MS 107-1]
 gi|300530589|gb|EFK51651.1| LysM domain protein [Escherichia coli MS 107-1]
          Length = 319

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|271964297|ref|YP_003338493.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021]
 gi|270507472|gb|ACZ85750.1| hypothetical protein Sros_2792 [Streptosporangium roseum DSM 43021]
          Length = 264

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 68/267 (25%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L +G     V+ L+ RL   G       +   +    ++AV  FQ  + + P+  V
Sbjct: 53  PGKTLKIGAKGAEVKVLQTRLKELGYAP--GKIDGRYGGATQAAVWAFQKVNDISPTSTV 110

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL-- 215
              T  A+  P   ++             L        V +N+    +     G+V L  
Sbjct: 111 ARRTWNALEAPRTPKV-------------LVPNGKPTRVEMNLAKQVMVLYVAGQVKLIS 157

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            ++   G    +T   + ++ R   +                                  
Sbjct: 158 HTSSGSGIPYCETANWNGKVQRFCGDAR------------------------------TP 187

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
               +       W+                N +      F++      H        +  
Sbjct: 188 TGDYKTTWRRNGWHKSYLGQLY--------NPI------FFNG-GIAFHG-----ALSVP 227

Query: 336 VRFETSGCVRVR-NIIDLDVWLLKDTP 361
           +   + GCVR+  N+  +   LL  + 
Sbjct: 228 LAPASHGCVRLPMNVAGMLPGLLGKSV 254


>gi|145300422|ref|YP_001143263.1| peptidoglycan-binding LysM [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853194|gb|ABO91515.1| peptidoglycan-binding LysM [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 308

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 74/261 (28%), Gaps = 63/261 (24%)

Query: 135 DAYVESAVKLFQM--RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
              +E+    FQ+   + L+ +   D   L+A       R+            L+     
Sbjct: 51  GQPLEAVAAKFQLGLTNMLEANPKADPLLLQAG-----ERLVIPHQ-------LILPDAP 98

Query: 193 LRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI 250
              +++N+    L     GK V     + +G++   TP    + + R    P W     +
Sbjct: 99  REGIVLNVAEMRLYYYPKGKKVVEVLPIGIGQLGTDTPENWVTSVQRKKAGPTWTPTAKM 158

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             +                                    +    +       G  N M  
Sbjct: 159 HAE-----------------------------------YAARGESLPAVWPAGPDNPMGL 183

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH--- 367
             +          H T     F   +R  + GCVR+RN      +L K  P  +R     
Sbjct: 184 FALYIGKMYAI--HGTNAQ--FGIGLR-VSHGCVRLRNED--IEYLFKQIPVGTRVQFVN 236

Query: 368 --IEEVVKTRKTTPVKLATEV 386
             I+  V+      +++   +
Sbjct: 237 QPIKATVEPDGRRYLEVHQPL 257


>gi|332759475|gb|EGJ89783.1| lysM domain protein [Shigella flexneri 2747-71]
          Length = 301

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 79  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 138

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 139 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 163

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 164 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 219

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 220 NIINTPIK 227


>gi|323947583|gb|EGB43587.1| ykud domain-containing protein [Escherichia coli H120]
          Length = 301

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 79  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 138

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 139 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 163

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 164 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 219

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 220 NIINTPIK 227


>gi|302536402|ref|ZP_07288744.1| lipoprotein [Streptomyces sp. C]
 gi|302445297|gb|EFL17113.1| lipoprotein [Streptomyces sp. C]
          Length = 288

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ S  V+ L+ RL        S   +  + +   +AVK FQ +HGL  +G VD +T + 
Sbjct: 86  GDESEQVRELQARLRQL--KLVSTAPTAFYGSKTTAAVKTFQSQHGLPATGSVDEATWQK 143

Query: 165 MN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +      P D  +R    N +       + M  R + ++  + +L  + +GKV     V 
Sbjct: 144 VQGLTKKPTDDELRPPTTNEVDA--PDPRCMQGRVMCISKESRTLAWMIDGKVVSTMDVR 201

Query: 221 VGRVDRQTPILHSRINRI 238
            G  +  T     ++   
Sbjct: 202 FGSENTPTREGLFQVEWK 219


>gi|332089283|gb|EGI94389.1| lysM domain protein [Shigella boydii 5216-82]
          Length = 213

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 51  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 110

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 111 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 135

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 136 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 191

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 192 NIINTPIK 199


>gi|300866800|ref|ZP_07111480.1| Peptidoglycan-binding domain 1 (fragment) [Oscillatoria sp. PCC
           6506]
 gi|300335209|emb|CBN56640.1| Peptidoglycan-binding domain 1 (fragment) [Oscillatoria sp. PCC
           6506]
          Length = 491

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 32/208 (15%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W   P   L  G+    V  L++ L   G           +DA   +AV+ FQ   GL  
Sbjct: 48  WGN-PALALRRGDRGPEVVELQKNLQTRGYYAGETT--GFYDAATRAAVRKFQQEKGLRV 104

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G+    TL  +    +     L       ++  +                         
Sbjct: 105 DGIAGRRTLSKLQSKSEESQATLTTTKTYSQQTSK-----------------------SE 141

Query: 214 GLRSTVIVGRVDRQT--PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
            ++   I G+ D         +++         + P+S++         Q+  Y   + I
Sbjct: 142 NVKPPAIDGKTDNAPKKAETSNKMTLKKTIYGNISPKSVVYSGAGLFFAQNMMY--RHTI 199

Query: 272 HMIDEKGKEVF--VEEVDWNSPEPPNFI 297
            + D K   V    + V  ++     F 
Sbjct: 200 SVYDRKFNLVKTIPDTVKLSAFGFSKFK 227


>gi|323967054|gb|EGB62480.1| ykud domain-containing protein [Escherichia coli M863]
 gi|323976514|gb|EGB71602.1| ykud domain-containing protein [Escherichia coli TW10509]
 gi|327253512|gb|EGE65150.1| lysM domain protein [Escherichia coli STEC_7v]
          Length = 319

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|294497796|ref|YP_003561496.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294347733|gb|ADE68062.1| Putative peptidoglycan binding domain protein [Bacillus megaterium
           QM B1551]
          Length = 354

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)

Query: 91  RGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            G  P       L  G+   +V+ L+++L   G    ++G    F A  +SAV+ FQ  H
Sbjct: 182 SGSTPAPSTGTVLKKGSKGNAVKELQQKLTSLGY--NTQGTDGVFGANTDSAVRKFQKDH 239

Query: 150 GLDPSGMVDSSTLEAMNVP 168
           GL   G+V  ST +A+   
Sbjct: 240 GLTADGIVGPSTYKALGSS 258



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+   +VQ L+++L   G    +KG    F A  E+AV+ FQ  + L   G+ 
Sbjct: 286 TKQTLKKGSKGSNVQALQKKLTAIGY--NTKGTDGIFGANTEAAVRNFQKDNKLAADGIA 343

Query: 158 DSSTLEAMNV 167
             +TL A++ 
Sbjct: 344 GPNTLTAISK 353



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 43/176 (24%), Gaps = 61/176 (34%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                   +++N     L   +NG +    +V  GR    TP  H      + N     P
Sbjct: 31  AASTPSHLIIINKATNKLAYYQNGSLVRTFSVGTGRTQSLTPEGHF----KVVNKIVNRP 86

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KIN 306
                                 NI                               G   N
Sbjct: 87  ------------------YYKGNI-----------------------------PGGDPRN 99

Query: 307 AMASTKIEFYSRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
            + +  +   +R        +H    P        + +SGCVR+ +  +   WL  
Sbjct: 100 PLGNRWLGLNARGTYGTTYAIHGNNNPASIGK---YVSSGCVRMYD--EEVEWLFS 150


>gi|156934400|ref|YP_001438316.1| hypothetical protein ESA_02231 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532654|gb|ABU77480.1| hypothetical protein ESA_02231 [Cronobacter sakazakii ATCC BAA-894]
          Length = 324

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 45/185 (24%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD- 225
           P   R   + + + R   L +       +L+N+    L     G+       + +G++D 
Sbjct: 81  PYVPRAGSV-LTIPRQMLLPDAPREG--ILINLAELRLYYFAPGENTVTVYPIGIGQLDG 137

Query: 226 -RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP + + +++   NP W    +I  +                               
Sbjct: 138 DTLTPTMQTTVSQKRANPTWTPTANIRAR------------------------------- 166

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                  +  +       G  N M    I   +    Y +H T     F   +R  +SGC
Sbjct: 167 ----YKAQGIDLPAVMPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGC 219

Query: 344 VRVRN 348
           +R+R+
Sbjct: 220 IRLRD 224


>gi|119512142|ref|ZP_01631234.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119463232|gb|EAW44177.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 407

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV+ L+E+L  +G       ++  +D   E AV+ FQ  HGL   G+V  S
Sbjct: 65  ALERGDQGPSVKNLQEQLQQAGFY--QAPITEVYDFSTEDAVRRFQQAHGLAVDGIVGVS 122

Query: 161 TLEAMNVPVDLRIRQ 175
           T + +      +I+Q
Sbjct: 123 TRQKLETSPTPQIKQ 137



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S +V+ L+ERL ++G           F    E A+K FQ  + LD  G+   +T
Sbjct: 202 LQKGDESEAVRILQERLRVAGFFSGQAT--GVFGPVTEDALKAFQQAYELDVDGIAGPAT 259

Query: 162 LEAMNV 167
           L  +  
Sbjct: 260 LRKLPT 265



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 13/151 (8%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIAQTEKAIA- 83
                +      E +      +    F +  A      +  D     ++        IA 
Sbjct: 197 PNPNLLQKGDESEAVRILQERLRVAGFFSGQATGVFGPVTEDALKAFQQAYELDVDGIAG 256

Query: 84  --FYQDILSRG-------GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               + + + G           +    L  G+   +V+ L++ LI +G        S  F
Sbjct: 257 PATLRKLPTLGVGGEQTPPIQAVSTDNLTRGHQGEAVKLLQQHLIQAGYFK--GTPSGYF 314

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           D+   +AV  FQ  + L  SG+   +T   +
Sbjct: 315 DSSTAAAVSQFQAANYLAVSGIAGPTTRAKL 345


>gi|156934683|ref|YP_001438599.1| hypothetical protein ESA_02518 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532937|gb|ABU77763.1| hypothetical protein ESA_02518 [Cronobacter sakazakii ATCC BAA-894]
          Length = 306

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 44/187 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G    +   + +G++ + TPI   +++ R   NP 
Sbjct: 91  LILPDTPHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWVTKVERKRANPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 151 WTPTAKMHAE-----------------------------------YAAAGEPLPPVVPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+RN      +L ++ P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFENVPVG 228

Query: 364 SRYHIEE 370
           +R     
Sbjct: 229 TRVQFVN 235


>gi|324113536|gb|EGC07511.1| ykud domain-containing protein [Escherichia fergusonii B253]
          Length = 324

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+       TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSHVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 KIINTPIK 245


>gi|218548643|ref|YP_002382434.1| hypothetical protein EFER_1277 [Escherichia fergusonii ATCC 35469]
 gi|218356184|emb|CAQ88801.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 326

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 99  DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 158

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 159 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 183

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+       TP    
Sbjct: 184 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSHVTPGTKV 239

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 240 KIINTPIK 247


>gi|311279980|ref|YP_003942211.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749175|gb|ADO48927.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 321

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 47/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     G+       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYPPGQNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 158 TANIRAR-----------------------------------YKANGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|119488958|ref|ZP_01621893.1| ErfK/YbiS/YcfS/YnhG-like protein [Lyngbya sp. PCC 8106]
 gi|119454914|gb|EAW36057.1| ErfK/YbiS/YcfS/YnhG-like protein [Lyngbya sp. PCC 8106]
          Length = 193

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 61/214 (28%), Gaps = 65/214 (30%)

Query: 153 PSGMVDSST-LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             G+V +   +   + P    + Q+           +       +++ +    +      
Sbjct: 35  NDGVVAAKLSVTKFSTPKSSLLHQI----------SKPSDPKLQLIIRLSDRRVYVYRQD 84

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           ++     + VGR   +TP    ++ + +  P W  P +    +++               
Sbjct: 85  QLLTSYPIAVGRDGWETPTGQYQVIQKIQEPAWEHPFT---GEIIP-------------- 127

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTYMHDTPEP 329
                                         PG  N +    I F+    N    H TP  
Sbjct: 128 ------------------------------PGPDNPLGMRWIGFWTDGTNYIGFHGTPNE 157

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                     + GC+R+  +++  L   ++  TP
Sbjct: 158 DTVGQ---AASHGCIRMLNQDVQLLFEKVMIGTP 188


>gi|13472170|ref|NP_103737.1| hypothetical protein mlr2376 [Mesorhizobium loti MAFF303099]
 gi|14022915|dbj|BAB49523.1| mlr2376 [Mesorhizobium loti MAFF303099]
          Length = 200

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 29/193 (15%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI-MFNPYWVIPRSIIQKDMMALLRQD 262
                E        +  + R             ++ + +       + I    +    + 
Sbjct: 9   YHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARL 68

Query: 263 PQYLKDNNIHMI-------------DEKGKEVFVEEVDWNSPEPPNF---------IFRQ 300
            + L  +   +                   EV     +      P F          F  
Sbjct: 69  VRVLDPSGKWLAVFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTI 128

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLK 358
             G  N + S  I+     +  +H TPEP          + GC+R+ N    DL   + K
Sbjct: 129 AAGPNNPVGSVWIDLSIE-SYGIHGTPEPGKIGTT---FSHGCIRLTNWDAEDLASMVQK 184

Query: 359 DTPTWSRYHIEEV 371
            T    +  +   
Sbjct: 185 GTKVSFKDEMANA 197


>gi|296102869|ref|YP_003613015.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295057328|gb|ADF62066.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 321

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYPPGKNEVSVYPIGIGQLGGDTLTPTMITTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +  +       G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIDLPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|260597485|ref|YP_003210056.1| hypothetical protein CTU_16930 [Cronobacter turicensis z3032]
 gi|260216662|emb|CBA29996.1| Uncharacterized protein ycfS [Cronobacter turicensis z3032]
          Length = 324

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 58/185 (31%), Gaps = 45/185 (24%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVD- 225
           P   R   + + + R   L +       +L+NI    L     G K      + +G++D 
Sbjct: 81  PYVPRAGSV-LTIPRQMLLPDAPREG--ILINIAELRLYYFPPGEKSVTVYPIGIGQLDG 137

Query: 226 -RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP + + +++   NP W    +I  +                               
Sbjct: 138 DTLTPTMQTTVSQKRANPTWTPTANIRAR------------------------------- 166

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                  +  +       G  N M    I   +    Y +H T     F   +R  +SGC
Sbjct: 167 ----YKAQGIDLPPVVPAGPENPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGC 219

Query: 344 VRVRN 348
           +R+R+
Sbjct: 220 IRLRD 224


>gi|260597218|ref|YP_003209789.1| L,D-transpeptidase [Cronobacter turicensis z3032]
 gi|260216395|emb|CBA29460.1| Uncharacterized protein ybiS [Cronobacter turicensis z3032]
          Length = 309

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 44/187 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G    +   + +G++ + TPI   +++ R   NP 
Sbjct: 94  LILPDTPHEGIVINSAEMRLYYYPQGTNTVIVLPIGIGQLGKDTPINWVTKVERKRANPT 153

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 154 WTPTAKMHAE-----------------------------------YAAAGEPLPPVVPAG 178

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+RN      +L ++ P  
Sbjct: 179 PDNPMGLYALYIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFENVPVG 231

Query: 364 SRYHIEE 370
           +R     
Sbjct: 232 TRVQFVN 238


>gi|332090818|gb|EGI95910.1| lysM domain protein [Shigella boydii 5216-82]
          Length = 334

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNLLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|294054341|ref|YP_003547999.1| Peptidoglycan-binding domain 1 protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293613674|gb|ADE53829.1| Peptidoglycan-binding domain 1 protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 350

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 89/297 (29%), Gaps = 48/297 (16%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y  ++ R     +P      G    +   L+  L  +G       +          A+  
Sbjct: 51  YYYLVVRPAERAVP-----PGRPIANNVELQIALARNGF--SPGSIDGVPGNQTRQALTA 103

Query: 145 FQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQ-----LQVNLMRIKKLLEQKMGLR-YV 196
           FQ    L+PSG++D +T   + +  P            LQV          + +    Y 
Sbjct: 104 FQQSRKLEPSGVLDEATKHYLRIEDPCFTHYTLTGRDFLQVTAKPKTWREREYLESMAYN 163

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            +    A     +   +      +  R++        R+   +    + + + I + D+ 
Sbjct: 164 SIKEMLAERSLSDPDYIAR----LNPRMNWGAAKPGDRVLLPVI-APYSVTQKIARIDIS 218

Query: 257 AL--------------------LRQDPQYLKDNNIHM---IDEKGKEVFVEEVDWNSPEP 293
                                 + +  +     ++ +   +D+         +   +   
Sbjct: 219 LSQRSLQLIDQAGKVHFHCPVSIARQIEKRPLGDLEVTVRVDQPNYTFNPSILTATAERE 278

Query: 294 P-NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                F   PG  N +    I   +R +  +H TP P       R E+SGC R+ N 
Sbjct: 279 GITRKFVIPPGPNNPVGLAWIGL-NRPSYGIHGTPVPEQVG---RTESSGCFRLANW 331


>gi|116747924|ref|YP_844611.1| ErfK/YbiS/YcfS/YnhG family protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116696988|gb|ABK16176.1| ErfK/YbiS/YcfS/YnhG family protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 321

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 64/217 (29%), Gaps = 54/217 (24%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
              +      R +++N+P   +   +  G       + +G    ++PI    I     NP
Sbjct: 100 TFWVLPPTQHRQLVINVPELRIYFFDKSGNAVQTYPIGIGDEGWESPIGTFSITEKRPNP 159

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W IP S+ +K  MA +                                          P
Sbjct: 160 TWYIPASLQEKYGMAQM-----------------------------------------PP 178

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N +    ++F +     +H T  P       R  + GC+R      + +   +    
Sbjct: 179 GPENPLGEFMMKFSAG-AYGVHGTAMPWGVG---RLVSHGCIRCY-PEHIRILYPQVPVG 233

Query: 363 WSRYHIEEVVKTRK-------TTPVKLATEVPVHFVY 392
           +    I E +K  +            +  ++P +  Y
Sbjct: 234 YKLEMIYEPIKFGQKNGQVFVEAHPDVYRKIPDYIQY 270


>gi|325497054|gb|EGC94913.1| hypothetical protein ECD227_1151 [Escherichia fergusonii ECD227]
          Length = 324

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINLAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+       TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSHVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 KIINTPIK 245


>gi|218507870|ref|ZP_03505748.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 103

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 33  ASVLDEIINESYHSIVNDRFDN-FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            S LD ++N       +D+FD    +R    + S+ PI+  +++A  ++AI  YQ I + 
Sbjct: 35  QSALDGLLNAPRRGNWDDQFDAKAASRTASAVVSNTPILGPQSVASAQQAIMQYQQIAAA 94

Query: 92  GGWPELPIR 100
           GGWPE+   
Sbjct: 95  GGWPEVNPG 103


>gi|296134424|ref|YP_003641671.1| spore cortex-lytic enzyme [Thermincola sp. JR]
 gi|296033002|gb|ADG83770.1| spore cortex-lytic enzyme [Thermincola potens JR]
          Length = 229

 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V +L+ RL   G       +   F A    AVK FQ +HGL P G+V  +T  A
Sbjct: 36  GSKGSDVIKLQTRLKDWGYFK--GPVDGVFGAATSRAVKNFQRKHGLTPDGVVGPATWRA 93

Query: 165 MNVPVDLR 172
           + +    R
Sbjct: 94  LGISAFSR 101


>gi|218689620|ref|YP_002397832.1| hypothetical protein ECED1_1877 [Escherichia coli ED1a]
 gi|306815069|ref|ZP_07449225.1| hypothetical protein ECNC101_23543 [Escherichia coli NC101]
 gi|331657653|ref|ZP_08358615.1| putative LysM domain protein [Escherichia coli TA206]
 gi|218427184|emb|CAR08070.2| conserved hypothetical protein [Escherichia coli ED1a]
 gi|305851717|gb|EFM52170.1| hypothetical protein ECNC101_23543 [Escherichia coli NC101]
 gi|315299726|gb|EFU58966.1| LysM domain protein [Escherichia coli MS 16-3]
 gi|324007052|gb|EGB76271.1| LysM domain protein [Escherichia coli MS 57-2]
 gi|331055901|gb|EGI27910.1| putative LysM domain protein [Escherichia coli TA206]
          Length = 334

 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 53/180 (29%), Gaps = 42/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYNYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            N +    +     N  Y +H T  P          +SGC+R+       L   +   TP
Sbjct: 173 NNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFSSVRTGTP 229


>gi|209524094|ref|ZP_03272645.1| 40-residue YVTN family beta-propeller repeat protein [Arthrospira
           maxima CS-328]
 gi|209495469|gb|EDZ95773.1| 40-residue YVTN family beta-propeller repeat protein [Arthrospira
           maxima CS-328]
          Length = 510

 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 73/242 (30%), Gaps = 15/242 (6%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           T+A  E  I     I++R    +    R L  G+    V  L+ RL   G  +     + 
Sbjct: 16  TVASAESPINRETQIVARATPTQNQTPRVLRRGSRGQEVAELQIRLRELGYFNNPNLGN- 74

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM----NVPVDLRIRQLQVNLMRIKKLLE 188
            F    + AV+ FQ   GL P G+V   T +A+      P    +           +   
Sbjct: 75  -FGPITQQAVRQFQSDRGLRPDGIVGQETRQALALIPPSPKTPEVATTPPPQPTATQPPP 133

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR----QTPILHSRINRIMFNPYW 244
                          ++    +     ++ + + +              R++ +      
Sbjct: 134 PATPPAAKPPAATPPAININYDLPKVFQTAIALLKNPSFVEAPPRDPSGRMSHVKTITGP 193

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF--VEEVDWNSPEPPNFIFRQDP 302
           + P+SI+         Q+  Y   + I + D     +    + + ++      F      
Sbjct: 194 IAPKSIVHSGKGLFFAQNMMY--RHTITVYDRNFDLIKTIPDSIKFSDFGFSKFTGNHRG 251

Query: 303 GK 304
             
Sbjct: 252 SP 253


>gi|254385203|ref|ZP_05000535.1| lipoprotein [Streptomyces sp. Mg1]
 gi|194344080|gb|EDX25046.1| lipoprotein [Streptomyces sp. Mg1]
          Length = 292

 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 8/135 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ S  V+ L+ RL     +  +      + +   +AVK FQ R+GL  SG VD+ T + 
Sbjct: 90  GDDSEQVRELQARLKQLKLMSVAPT--GFYGSKTTTAVKSFQSRNGLTASGSVDAETWKK 147

Query: 165 MN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +      P    +R   VN +       + M  R + ++  + +L  + +GKV     V 
Sbjct: 148 IQGLTKKPTADELRPPTVNEVDA--PDPRCMTGRVMCISKESRTLAWMIDGKVISTMDVR 205

Query: 221 VGRVDRQTPILHSRI 235
            G  +  T      +
Sbjct: 206 FGSENTPTREGVFDV 220


>gi|170768032|ref|ZP_02902485.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
 gi|170122798|gb|EDS91729.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia
           albertii TW07627]
          Length = 320

 Score = 76.2 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNAVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFNQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|85859402|ref|YP_461604.1| erfK/srfK family protein [Syntrophus aciditrophicus SB]
 gi|85722493|gb|ABC77436.1| erfK/srfK family protein [Syntrophus aciditrophicus SB]
          Length = 445

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 44/185 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLR---STVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               + +++N+ A  L   +     L      V +G  +R TP+    + R    P W +
Sbjct: 127 DAPRKGIVINLAAMRLFQFKGDGKFLTVSTYPVGIGSEERPTPMGQMYVQRKTARPTWHV 186

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI +                                    +  +      +  PG  N
Sbjct: 187 PASIAED-----------------------------------HRKKGDILPAKVPPGPDN 211

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +    +   +  +  +H T +P          T+GC+R+     +   L ++TP  +R 
Sbjct: 212 PLGEYALYLSNP-SYLIHGTNKPASIG---LNATNGCIRLY-PEHI-KKLYENTPVNTRV 265

Query: 367 HIEEV 371
            I   
Sbjct: 266 SIVNQ 270


>gi|333004925|gb|EGK24445.1| lysM domain protein [Shigella flexneri VA-6]
          Length = 229

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 48/163 (29%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 157 TANIRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 221


>gi|225386952|ref|ZP_03756716.1| hypothetical protein CLOSTASPAR_00702 [Clostridium asparagiforme
           DSM 15981]
 gi|225046964|gb|EEG57210.1| hypothetical protein CLOSTASPAR_00702 [Clostridium asparagiforme
           DSM 15981]
          Length = 538

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 8/122 (6%)

Query: 55  FLARVDMGIDSDIPIIS--KETIAQTE---KAIAFYQDILSRGGWPELPIRPLHLGNSSV 109
             A       S+  +I    ETIA      + + +  D +  G    +P   L +G    
Sbjct: 29  AGAEKTEATPSEARVIQVVPETIAPLGLDGQVLPYLAD-VDLGDAEPIPDY-LRIGVRHA 86

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V +L+ RL+  G +D  +     +      AVK FQ ++ L   G+V +ST +A+  P 
Sbjct: 87  IVAKLQARLMELGFMDNDEPTD-YYGEMTVQAVKHFQRQNELAQDGIVGNSTWDAIMSPD 145

Query: 170 DL 171
             
Sbjct: 146 AK 147



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 9/141 (6%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
              +   V   I+ +    ++   F       D   D    +  +       +       
Sbjct: 76  PDYLRIGVRHAIVAKLQARLMELGF----MDNDEPTDYYGEMTVQAVKHFQRQNELAQDG 131

Query: 88  ILSRGGW-----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           I+    W     P+     +  G     +QR+++RL   G L  +  ++  F    E+AV
Sbjct: 132 IVGNSTWDAIMSPDAKYYAVSKGTQGDDIQRIQQRLYELGYLATADLVTGNFGDSTEAAV 191

Query: 143 KLFQMRHGLDPSGMVDSSTLE 163
              Q  +GL+  G V   T+ 
Sbjct: 192 LKLQEVNGLNMDGKVGQKTIN 212



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG    +V+R+++ L   G L  S  ++  +    ++AVK FQ R+GL   G+V   T
Sbjct: 295 LMLGERGDAVKRMQQLLSKHGYL-YSGNVTGYYGEATQTAVKNFQSRNGLSVDGLVGVQT 353

Query: 162 LEAMNVPVDLR 172
           L  ++     R
Sbjct: 354 LAKLSSDNVRR 364



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   ++RL   G L         +      A+K FQ R+     G +  ST
Sbjct: 224 LSYGEKSDVVLACQKRLKELGYLTTEP--DGTYGEDTAIAIKQFQARNDQIVDGYLGPST 281

Query: 162 LEAMNVP 168
             A++ P
Sbjct: 282 RMALDSP 288


>gi|87303656|ref|ZP_01086431.1| hypothetical protein WH5701_12803 [Synechococcus sp. WH 5701]
 gi|87281761|gb|EAQ73726.1| hypothetical protein WH5701_12803 [Synechococcus sp. WH 5701]
          Length = 229

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 51/190 (26%), Gaps = 70/190 (36%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             R ++++     +  +E+G+   R  V VG    +TP+   ++  +  +P W  P S  
Sbjct: 85  PERSLVLHRSKRQVVVIEDGRELRRFPVAVGMPGWETPLGRFQVIEMAPDPVWKHPVSGK 144

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                                                             PG  N + S 
Sbjct: 145 LY-----------------------------------------------PPGPNNPLGSR 157

Query: 312 KIEFYSRNNT------------------YMHDTPEPILFNNVVRFETSGCVRV--RNIID 351
            I F+                         H TP+           + GCVR+   N+ D
Sbjct: 158 WIGFHRDCAGKRGFNGQQHLEVKGCVTAGFHGTPQRETVGQ---AVSHGCVRMYDENVRD 214

Query: 352 LDVWLLKDTP 361
           L   +   T 
Sbjct: 215 LFELVRMGTV 224


>gi|302870718|ref|YP_003839355.1| cell wall hydrolase/autolysin [Micromonospora aurantiaca ATCC
           27029]
 gi|302573577|gb|ADL49779.1| cell wall hydrolase/autolysin [Micromonospora aurantiaca ATCC
           27029]
          Length = 417

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +RP+  G+   +V  +R  L     L    G    +DA  E AV+ FQ   GL   G 
Sbjct: 30  VVVRPIRPGDQGPAVAEIRTVLAGLELLPAEAGGDD-YDAQTERAVRAFQQSRGLSVDGR 88

Query: 157 VDSSTLEAMNV 167
           V + T  A++ 
Sbjct: 89  VGAETWRALDA 99



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      W  L       G                V+ L+ERL+  G 
Sbjct: 75  RAFQQSRGLSVDGRVGAETWRALDAARWRFGARALYHAVPEPLTGEDVRSLQERLLEMGY 134

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     +      AV  FQ   GL P G     T+ A+  
Sbjct: 135 DVGRA--DAIYGIRTSRAVAQFQREMGLKPDGSCGPHTVNALRR 176


>gi|269140434|ref|YP_003297135.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda EIB202]
 gi|267986095|gb|ACY85924.1| ErfK/YbiS/YcfS/YnhG family protein [Edwardsiella tarda EIB202]
 gi|304560228|gb|ADM42892.1| L,D-transpeptidase YbiS [Edwardsiella tarda FL6-60]
          Length = 306

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 52/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G++ R TP+   + + R    P 
Sbjct: 91  LILPNTPHEGIVINSAEMRLYYYPKGSKTVIVLPIGIGQLGRDTPMNWVTSVQRKKAGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + ++                                   +            G
Sbjct: 151 WT-PTKKMHEE----------------------------------YAANGQYLPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R+      WL  + P  
Sbjct: 176 PDNPMGLYALYVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDPD--IKWLFDNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|295703171|ref|YP_003596246.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
 gi|294800830|gb|ADF37896.1| N-acetylmuramoyl-L-alanine amidase cwlL (Cell wall hydrolase)
           (Autolysin) [Bacillus megaterium DSM 319]
          Length = 281

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+   +V+ L+++L   G    +KG    F A  +SAV+ FQ  HGL   G+V
Sbjct: 113 TGTVLKKGSKGNAVKELQQKLTSLGY--NTKGTDGVFGANTDSAVRKFQKDHGLTADGIV 170

Query: 158 DSSTLEAMNVP 168
             ST +A+   
Sbjct: 171 GPSTYKALGSS 181



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+   +VQ L+++L   G    +KG    F A  ESAV+ FQ  + L   G+ 
Sbjct: 213 TKQTLKKGSKGSNVQALQKKLTALGY--DTKGTDGIFGANTESAVRNFQKDNKLAADGIA 270

Query: 158 DSSTLEAMNV 167
             +TL A++ 
Sbjct: 271 GPNTLAAISK 280



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 11/76 (14%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTY----MHDTPEPILFNNVVRFETSG 342
           N      +     PG    N + +  +   +R        +H    P        + +SG
Sbjct: 3   NKIVNRPYYKGNIPGGDPRNPLGNRWLGLNARGTYGTTYAIHGNNNPASIGK---YVSSG 59

Query: 343 CVRVRNIIDLDVWLLK 358
           CVR+ +  +   WL  
Sbjct: 60  CVRMYD--EEVEWLFS 73


>gi|294637825|ref|ZP_06716097.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Edwardsiella tarda
           ATCC 23685]
 gi|291089024|gb|EFE21585.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Edwardsiella tarda
           ATCC 23685]
          Length = 306

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G++ R TP+   + + R    P 
Sbjct: 91  LILPNTPHEGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGRDTPMNWVTSVQRKKAGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + ++                                   +            G
Sbjct: 151 WT-PTKKMHEE----------------------------------YAANGQYLPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R+      WL ++ P  
Sbjct: 176 PDNPMGLYALYVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDPD--IKWLFENIPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|254425312|ref|ZP_05039030.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
 gi|196192801|gb|EDX87765.1| ErfK/YbiS/YcfS/YnhG family [Synechococcus sp. PCC 7335]
          Length = 189

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 54/174 (31%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    ++++I    +   +  ++     V VG  +  TPI    + +++ NP W  P   
Sbjct: 60  LANNRIVLSISDRRVYLFDGNELVNSYPVAVGTPETPTPIGEFAVTQLVVNPVWQSP--- 116

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                                                W           + PG  +A+  
Sbjct: 117 -------------------------------------WTGE-------VRSPGPNSALGL 132

Query: 311 TKIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
             I F   S  +   H TP      +     ++GCVR+ N    +L   +   T
Sbjct: 133 RWIGFTSNSEGSFGFHGTPTVESIGH---AASNGCVRMHNADVIELFSQVAIGT 183


>gi|121535699|ref|ZP_01667503.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121305730|gb|EAX46668.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 238

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 27/173 (15%)

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFI 297
           + N     P   +   +    R    Y             GK      V        ++ 
Sbjct: 44  IPNQPTTAPTGTVSIIIKVPERILEVYNDGQLYKKYRVAVGKSKTPTPVGEWKVVWKDYN 103

Query: 298 FRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
           +       +   +  +        Y +H T  P       RF + GC+R+RN  + +L  
Sbjct: 104 W------GSGFGTRWMGLNVPWGVYGIHGTNNPWSIG---RFASHGCIRMRNKDVEELFE 154

Query: 355 WLLKDTPTW---SRYHIEEVVKTRKT------TPVKLATEVPVHFVYISAWSP 398
           W+   T       +  ++  +K + T        VKL         Y+ A + 
Sbjct: 155 WVPIGTEVKIVGPKVKVQRTLKKQMTGADVVMLQVKLKE-----LGYLKARAD 202



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L    +   V  L+ +L   G L         F A  E AV+ FQ   GL+ +G+V+ 
Sbjct: 173 RTLKKQMTGADVVMLQVKLKELGYLKARA--DGIFGAVTEEAVRAFQADKGLEVNGVVNR 230

Query: 160 STLEAMNV 167
             L+ + +
Sbjct: 231 QMLDLLGI 238


>gi|255067759|ref|ZP_05319614.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sicca ATCC 29256]
 gi|255047970|gb|EET43434.1| ErfK/YbiS/YcfS/YnhG family protein [Neisseria sicca ATCC 29256]
          Length = 147

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 71/192 (36%)

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            QT +   +I    FNP W IP+SI ++                                
Sbjct: 2   TQTTLGEHKIGAKAFNPTWHIPKSIQKER------------------------------- 30

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCV 344
                    + +     G  N +    +          +H T  P          + GCV
Sbjct: 31  --------GDGVKSVPAGPNNPLGPVFVRLGDPKLGLGIHGTNAPASV---PGVRSHGCV 79

Query: 345 RVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI-- 402
           R+++   L                 + + +     V          +Y  A   +D+   
Sbjct: 80  RMKSPDAL--------------EFAKTIASGAPASV----------IYQMASLNEDANQN 115

Query: 403 --IQFRDDIYGL 412
             +    D YG 
Sbjct: 116 LWLAAYHDPYGK 127


>gi|282898625|ref|ZP_06306613.1| ErfK/YbiS/YcfS/YnhG [Cylindrospermopsis raciborskii CS-505]
 gi|281196493|gb|EFA71402.1| ErfK/YbiS/YcfS/YnhG [Cylindrospermopsis raciborskii CS-505]
          Length = 204

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 44/166 (26%), Gaps = 52/166 (31%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    V+V++    +      +V     + VG+   +TP    ++     +P W  
Sbjct: 71  PGAGNNQSDVVVDLSDRRVYVYRYDQVVASYPIAVGKKGWETPTGTFKVIHKEHHPIWKH 130

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P +    +                                                G  +
Sbjct: 131 PITGKIFE-----------------------------------------------AGTDS 143

Query: 307 AMASTKIEFYS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +    I F+S  +N    H TP   L        + GC+R+RN  
Sbjct: 144 PLGDRWIGFWSDGKNEIGFHGTPNKDLIG---GAVSHGCLRMRNPD 186


>gi|196230054|ref|ZP_03128917.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196225651|gb|EDY20158.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 363

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 51/183 (27%), Gaps = 55/183 (30%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            LE + + KV     V VG     +PI H  +  +                 M   R DP
Sbjct: 226 MLEVLVDDKVAAAFPVTVGSQQTASPIGHWTVKAVAK---------------MPTFRYDP 270

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
             LK                        E  +      PG  N +    I   ++    +
Sbjct: 271 LMLKKG----------------------ERSSHANLLPPGPNNPVGVLWIAL-NKKGIGI 307

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           H T +P       R  + GC+R+ N              W    +  +VK      V   
Sbjct: 308 HGTNDPDSIG---RNASHGCIRLAN--------------WDVVKLAGMVKPGVPVTVDDN 350

Query: 384 TEV 386
           + +
Sbjct: 351 SPL 353


>gi|299143670|ref|ZP_07036750.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
 gi|298518155|gb|EFI41894.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus sp. oral taxon
           386 str. F0131]
          Length = 260

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 55/209 (26%), Gaps = 60/209 (28%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +K FQ    L  +G ++  T +               N++    +        +++VN  
Sbjct: 44  IKKFQALSNLTVTGKINDITKK----------VLYNSNMVVKDDIQNAPTSGEWIVVNKT 93

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             +L          +  + +G  +  TP    +I     NP W                 
Sbjct: 94  KKTLTFYSGTAPMYKFPIALGTNETPTPSAKGKIQSKHVNPAW----------------- 136

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR--N 319
                    +                        +   +     N +    +       +
Sbjct: 137 -------GGM---------------------NGKYKPAKADDPNNPLGERWMGLSLPGYS 168

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +H T +P        + ++GC+R+ N
Sbjct: 169 GYGIHGTIKPHQIGT---YASNGCMRMFN 194


>gi|160872859|ref|ZP_02062991.1| LysM domain protein [Rickettsiella grylli]
 gi|159121658|gb|EDP46996.1| LysM domain protein [Rickettsiella grylli]
          Length = 326

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 71/237 (29%), Gaps = 57/237 (24%)

Query: 139 ESAVKLFQMRHGLDPS--GMVDS-------STLEAMNV--PVDLRIRQLQVNLMRIKKLL 187
           E  V   Q    L       +           +EA  +  P    +  + V   R   L 
Sbjct: 47  EDIVGQVQWTQALPGDTFNTIGRRYDMGYFELVEANPMINPDHPPLGSIIVIPSRF-ILP 105

Query: 188 EQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            ++ G   +++N+    +     +  + +   V +GR    TP+  S I   M NP W +
Sbjct: 106 PKRQG---LIINLAELRIYYYPSHRHIVITYPVGIGREGWDTPLGPSWIAEKMRNPIWTV 162

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI +                                     + E      +  PG  N
Sbjct: 163 PESIRKDR-----------------------------------AKEGVYLPIKVAPGPDN 187

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +    +    +    +H T +        R  ++GC+R+   +I  L   + +   
Sbjct: 188 PLGGYAMRL-KQVTYLIHGTNDSQGIG---RRSSAGCIRLFPEDIESLFAQVARKEK 240


>gi|20808596|ref|NP_623767.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|254479061|ref|ZP_05092416.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|20517226|gb|AAM25371.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
           MB4]
 gi|214035017|gb|EEB75736.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 324

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L LG+    V  L+ RL   G       +   F    E+AVK +Q   GL P+
Sbjct: 172 PPVEYPTLRLGDRGPFVVNLQARLKSLGF--DPGPIDGIFGPKTEAAVKAYQQSRGLPPT 229

Query: 155 GMVDSSTLEAM 165
           G+VD +T  A+
Sbjct: 230 GIVDETTWNAL 240


>gi|254409634|ref|ZP_05023415.1| ErfK/YbiS/YcfS/YnhG family [Microcoleus chthonoplastes PCC 7420]
 gi|196183631|gb|EDX78614.1| ErfK/YbiS/YcfS/YnhG family [Microcoleus chthonoplastes PCC 7420]
          Length = 237

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 48/160 (30%), Gaps = 52/160 (32%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++V++  A + +    +      V VG+   +TP  + ++ R   NP W  P   I 
Sbjct: 110 DVRLVVDLSDAKVYSYWGEQEIASYPVAVGQPGWETPTGNFKVLRKQRNPIWRQP---IT 166

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
            D++                                              G  N +    
Sbjct: 167 GDLIPT--------------------------------------------GPDNPLGDRW 182

Query: 313 IEFYSR--NNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           I F+S   +    H T +  L        + GC+R+RN  
Sbjct: 183 IGFWSDEYHQIGFHGTNDEDLVGQP---VSHGCLRMRNAD 219


>gi|330838933|ref|YP_004413513.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
 gi|329746697|gb|AEC00054.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
          Length = 409

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 80/251 (31%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLV-NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +V+   +K    +K G  Y ++ N+ A SL   +N +      V +G++   TP+ +  +
Sbjct: 49  KVHASEVKSAAAEKTGDPYKIIINVAARSLGVYKNNEKIRLYPVGLGKLSTPTPVGYFSV 108

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
                                                            E +    +P +
Sbjct: 109 LTK----------------------------------------------EENPTWVDPGD 122

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                  G+ N +    ++ +       H T  P    +   + ++GC+R++        
Sbjct: 123 SKNTIPSGEGNPLGYRWMQVWGNYGI--HGTNHPESIGS---YVSNGCIRMKEA------ 171

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP--KDSIIQF--RDDIYG 411
                       + +                PV  +Y        KD++I +    D YG
Sbjct: 172 --------DVEEVYDYASVGT----------PVEIMYQRIVIDKIKDNMIVYYIYPDGYG 213

Query: 412 LDNVHVGIIPL 422
              + V  +  
Sbjct: 214 YQPLDVETVAK 224


>gi|260887313|ref|ZP_05898576.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
 gi|260862949|gb|EEX77449.1| ErfK/YbiS/YcfS/YnhG family protein [Selenomonas sputigena ATCC
           35185]
          Length = 429

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 80/251 (31%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLV-NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +V+   +K    +K G  Y ++ N+ A SL   +N +      V +G++   TP+ +  +
Sbjct: 69  KVHASEVKSAAAEKTGDPYKIIINVAARSLGVYKNNEKIRLYPVGLGKLSTPTPVGYFSV 128

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
                                                            E +    +P +
Sbjct: 129 LTK----------------------------------------------EENPTWVDPGD 142

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                  G+ N +    ++ +       H T  P    +   + ++GC+R++        
Sbjct: 143 SKNTIPSGEGNPLGYRWMQVWGNYGI--HGTNHPESIGS---YVSNGCIRMKEA------ 191

Query: 356 LLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSP--KDSIIQF--RDDIYG 411
                       + +                PV  +Y        KD++I +    D YG
Sbjct: 192 --------DVEEVYDYASVGT----------PVEIMYQRIVIDKIKDNMIVYYIYPDGYG 233

Query: 412 LDNVHVGIIPL 422
              + V  +  
Sbjct: 234 YQPLDVETVAK 244


>gi|297568912|ref|YP_003690256.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924827|gb|ADH85637.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 348

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 47/195 (24%)

Query: 187 LEQKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L Q      +++N+P   L       + ++ +   V +G  DR TP+    I + + +P 
Sbjct: 135 LPQIPSEPGMVLNLPEKRLYYFYRRNDNRLVISFPVGIGTADRGTPLGDFSITQKLTDPS 194

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P S+ ++                                        P+      PG
Sbjct: 195 WTVPASVREQR---------------------------------------PHLPAIVPPG 215

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M +  ++     + ++H T  P       R  T GC R+    D+ V         
Sbjct: 216 PDNPMGAYALQLSGG-SYFIHGTNRPWSIG---RRATLGCARLY-PEDIPVLFRMADRGT 270

Query: 364 SRYHIEEVVKTRKTT 378
               I + VK  +  
Sbjct: 271 PVRIIHQPVKVGRQQ 285


>gi|315506955|ref|YP_004085842.1| cell wall hydrolase/autolysin [Micromonospora sp. L5]
 gi|315413574|gb|ADU11691.1| cell wall hydrolase/autolysin [Micromonospora sp. L5]
          Length = 386

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G+   +V  +R  L     L    G    +DA  E AV+ FQ   GL   G V +
Sbjct: 2   RPIRPGDQGPAVAEIRTVLAGLELLPAEAGGDD-YDAQTERAVRAFQQSRGLSVDGRVGA 60

Query: 160 STLEAMNV 167
            T  A++ 
Sbjct: 61  ETWRALDA 68



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      W  L       G                V+ L+ERL+  G 
Sbjct: 44  RAFQQSRGLSVDGRVGAETWRALDAARWRFGARALYHAVPEPLTGEDVRSLQERLLEMGY 103

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     +      AV  FQ   GL P G     T+ A+  
Sbjct: 104 DVGRA--DAIYGIRTSRAVAQFQREMGLKPDGSCGPHTVNALRR 145


>gi|307331938|ref|ZP_07611033.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
           4113]
 gi|306882412|gb|EFN13503.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces violaceusniger Tu
           4113]
          Length = 299

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 4/154 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    + +G S   V+ L+ RL   G  + +      +    +++V  +Q  HGL  +
Sbjct: 87  PRVAPPVIAVGTSGDRVRELQARLRALGLFNRNPT--GYYGTITQASVSAYQRGHGLSVT 144

Query: 155 GMVDSSTLEAMNVPVD--LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           G V   T  ++        R +      + + K   + +  R + ++  + +L  + NG+
Sbjct: 145 GSVSRRTWTSLRSATKTPTRDQLHPPTTLPLAKPDPRCLTGRVLCISKTSRTLAWMVNGR 204

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           V     V  G     T     ++N    +    I
Sbjct: 205 VVSAMDVRFGSEYTPTREGLFQVNFKSRDHVSTI 238


>gi|82544419|ref|YP_408366.1| hypothetical protein SBO_1948 [Shigella boydii Sb227]
 gi|81245830|gb|ABB66538.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332094472|gb|EGI99521.1| lysM domain protein [Shigella boydii 3594-74]
          Length = 320

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +   +                                      +          G  N
Sbjct: 158 TANTRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|239629092|ref|ZP_04672123.1| peptidoglycan-binding domain 1 protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519238|gb|EEQ59104.1| peptidoglycan-binding domain 1 protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 559

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 47/143 (32%), Gaps = 9/143 (6%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
              + +   V  EI+ +    +++  F       D   D    +          +     
Sbjct: 98  PAPEYLRIGVRHEIVKKLQQRLMDLGF----MDNDEPTDYFGEMTQMAVKHFQRQNELPM 153

Query: 86  QDILSRGGWPELPIRPLH-----LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             I+    W  +            G     +QR+++RL   G L  +  ++  F    E+
Sbjct: 154 DGIVGNATWDAIMAEDAKYYAVSKGTQGDDIQRIQQRLYELGYLASADLVTGNFGDSTEA 213

Query: 141 AVKLFQMRHGLDPSGMVDSSTLE 163
           AV   Q  +GLD  G V   T+ 
Sbjct: 214 AVLKLQEVNGLDQDGKVGQRTIN 236



 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V++L++RL+  G +D  +     F    + AVK FQ ++ L   G+V ++T
Sbjct: 103 LRIGVRHEIVKKLQQRLMDLGFMDNDEPTD-YFGEMTQMAVKHFQRQNELPMDGIVGNAT 161

Query: 162 LEAM 165
            +A+
Sbjct: 162 WDAI 165



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 11/160 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIPIISKET 74
           L     +    +      +++ E    + +  +     D       +         + + 
Sbjct: 237 LLYSDEIKPNFLAYGEKSDVVLECQKRLKDLGYLTTTPDGAYGEDTVVAVKQFQARNDQV 296

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +      +     I      P+     L LG S  +V ++++ L   G L  S  ++  F
Sbjct: 297 VDG---YLGPSTRIALNS--PDARANGLMLGESGDAVIKVQKLLNKHGYL-VSGNVTGYF 350

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
               E A+K FQ R+GL   G+V   T+  +      R  
Sbjct: 351 GEATERAIKNFQSRNGLTSDGLVGVQTMAKLTSDNVRRPA 390



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   ++RL   G L  +     A+      AVK FQ R+     G +  ST
Sbjct: 248 LAYGEKSDVVLECQKRLKDLGYL--TTTPDGAYGEDTVVAVKQFQARNDQVVDGYLGPST 305

Query: 162 LEAMNVPVDLRIRQLQV 178
             A+N   D R   L +
Sbjct: 306 RIALN-SPDARANGLML 321


>gi|187730975|ref|YP_001880717.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella boydii CDC
           3083-94]
 gi|187427967|gb|ACD07241.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Shigella boydii CDC
           3083-94]
          Length = 320

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPTGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +   +                                      +          G  N
Sbjct: 158 TANTRAR-----------------------------------YKAQGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|320184240|gb|EFW59054.1| L,D-transpeptidase YcfS [Shigella flexneri CDC 796-83]
          Length = 319

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 55/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 97  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 156

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +   +                                      +          G  N
Sbjct: 157 TANTRAR-----------------------------------YKAQGIELPAVVPAGPDN 181

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 182 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 237

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 238 NIINTPIK 245


>gi|138896743|ref|YP_001127196.1| cell wall lytic activity [Geobacillus thermodenitrificans NG80-2]
 gi|134268256|gb|ABO68451.1| Cell wall lytic activity [Geobacillus thermodenitrificans NG80-2]
          Length = 627

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 10/151 (6%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
                  +    + E    +    F               PI  +   A  + A      
Sbjct: 27  AAEWKVGMSSSKVKELQQLLKEKGF----FSYPQATGYFGPITEEAVRAFQKAANLPVTG 82

Query: 88  ILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           ++    + +L       R L +G     V+ L++RL   G       ++  F    E+AV
Sbjct: 83  VVDDATYAKLRAFVPTARTLSVGMRGDDVKVLQQRLKQLGYFK-YPEITGYFGTVTEAAV 141

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           K FQ  +GL  +G  D+ T+E +      + 
Sbjct: 142 KQFQQANGLKVTGKADAVTIERLRQAASKQA 172



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 78/293 (26%), Gaps = 31/293 (10%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIPIISKETIA 76
                 + +   +  + +      +    +        +   V               + 
Sbjct: 94  AFVPTARTLSVGMRGDDVKVLQQRLKQLGYFKYPEITGYFGTVTEAAVKQF--QQANGLK 151

Query: 77  QTEKA----IAFYQDIL-SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            T KA    I   +     +          L +G+    V  L++ L + G        +
Sbjct: 152 VTGKADAVTIERLRQAASKQATTTSSSSVTLKIGSRGSEVSELQKNLKLLGYFT-YPTAT 210

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +      AV+ FQ  +GL  +G VDS+TL  +   V  +             L     
Sbjct: 211 GYYGTITADAVRRFQKDNGLPATGSVDSTTLGRIADAVKKKTAPPAKENSSSVYLKIGTR 270

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI- 250
           G +   V      L              I G     T      + R   +    +  S+ 
Sbjct: 271 GEKVKQVQTNLKQLGY-------FTYPEITGYYGTITA---DAVRRFQKDNGLPVTGSVD 320

Query: 251 -----IQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFI 297
                  +D +      P     +++++     G++V   + +        + 
Sbjct: 321 STTFGRIEDAVKKKTASPAKESSSSVYLKTGTRGEKVKQVQTNLKQLGYFTYP 373



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 1/107 (0%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V++++  L   G       ++  +      AV+ FQ  +GL  +G VDS+T
Sbjct: 348 LKTGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDNGLPVTGSVDSTT 406

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
              +   V  +             L     G     V      L   
Sbjct: 407 FGRIEDAVKKKTAPPAEENRTSIYLTIGTRGEEVKRVQTKLKQLGYF 453



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 1/88 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VDS T
Sbjct: 431 LTIGTRGEEVKRVQTKLKQLGYFT-YPEITGYYGTITADAVRRFQKDAKLQANGIVDSQT 489

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            E +         Q   + + + +L+  
Sbjct: 490 YERLIGQAPASKGQASASKLDVMELIAD 517


>gi|91792069|ref|YP_561720.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
 gi|91714071|gb|ABE53997.1| ErfK/YbiS/YcfS/YnhG [Shewanella denitrificans OS217]
          Length = 304

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK +     + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKNIVEVLPIGIGQIGKDTPEKWVTTVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I +K+ +A                                             G  N M 
Sbjct: 154 I-RKEYLAK----------------------------------GEVLPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GC+R+R+       L    P  +R    
Sbjct: 179 LFALYIGNLYAI--HGTNA--TFGIGLR-ISQGCIRLRDAD--IEHLFNSVPEGTRVEFT 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|313887561|ref|ZP_07821244.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846439|gb|EFR33817.1| ErfK/YbiS/YcfS/YnhG [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 270

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 67/227 (29%), Gaps = 63/227 (27%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +K +Q R  L  +G +++ T +A+             N      +        +++VN  
Sbjct: 44  LKKWQARMNLPVTGGMNAKTKQAL----------YTENYEVYDMVTNPPTSGNWIVVNKS 93

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
             +L   + G+   +  V +G     TP   +RI+ +  NP W                 
Sbjct: 94  RRTLTLYKGGQALGKFPVTLGTGSTPTPSAKARIHNMHKNPAW----------------- 136

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRN 319
                    +                        +         N +    +      ++
Sbjct: 137 -------GGM---------------------GGKYTPVASNDPNNPLGERWMGLSIPGKS 168

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNII---DLDVWLLKDTPTW 363
              +H   +P+       + ++GC+R+ N     ++   +    P W
Sbjct: 169 GYGIHGNIKPLQIG---GYYSNGCIRMFNYDIENEIFPKMKVGAPVW 212


>gi|330830952|ref|YP_004393904.1| LysM domain-containing protein [Aeromonas veronii B565]
 gi|328806088|gb|AEB51287.1| LysM domain protein [Aeromonas veronii B565]
          Length = 306

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 69/223 (30%), Gaps = 44/223 (19%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +     +  + +   N  VD  + +    L+   +L+        +++N+    L     
Sbjct: 55  IAADFQLGLTNIMEANPGVDPYLPKAGSTLIIPHQLILPNAPREGIVINVAEMRLYYYPK 114

Query: 211 GK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           GK V     + +G++   TP    +++ R   NP W    +I ++               
Sbjct: 115 GKNVVEVLPIGIGQLGVNTPENWITKVERKRANPTWTPTENIRRR--------------- 159

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
                                + +          G  N M    +   +      H T  
Sbjct: 160 --------------------YAAQGKTLPAVWPAGPDNPMGLHALYIGNLYAI--HGTNA 197

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
              F   +R  +SGCVR+R   D+  +L  + P  +R      
Sbjct: 198 --TFGIGLR-VSSGCVRLR-ADDI-KYLFDNVPVGTRVQFVNQ 235


>gi|311280300|ref|YP_003942531.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308749495|gb|ADO49247.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 300

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 57/195 (29%), Gaps = 45/195 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G    +   + +G++ + TPI   + + R    P 
Sbjct: 85  LILPDTPHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTAVERKKAGPT 144

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  + + A                                             G
Sbjct: 145 WTPTAKMHAEYIAA-----------------------------------GNPLPSVVPAG 169

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+RN  D   +L ++ P  
Sbjct: 170 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFQNVPVG 222

Query: 364 SR-YHIEEVVKTRKT 377
           +R   I+E VK    
Sbjct: 223 TRVQFIDEAVKATTE 237


>gi|117619278|ref|YP_857770.1| LysM domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560685|gb|ABK37633.1| LysM domain protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 308

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK V     + +G++   TP    +++ R   NP W    +
Sbjct: 96  PREGIVINVAEMRLYYYPKGKNVVQVLPIGIGQLGVNTPENWITKVERKRANPTWTPTEN 155

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    + +          G  N M 
Sbjct: 156 IRRR-----------------------------------YAAQGKTLPAVWPAGPDNPMG 180

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  +SGCVR+R   D+  +L  + P  +R    
Sbjct: 181 LHALYIGNLYAI--HGTNA--TFGIGLR-VSSGCVRLR-ADDI-KYLFDNVPVGTRVQFV 233

Query: 370 EV 371
             
Sbjct: 234 NQ 235


>gi|328542077|ref|YP_004302186.1| ATP synthase subunit [polymorphum gilvum SL003B-26A1]
 gi|326411827|gb|ADZ68890.1| ATP synthase subunit [Polymorphum gilvum SL003B-26A1]
          Length = 199

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 58/207 (28%), Gaps = 44/207 (21%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
            + T    ++  D+  +  +    R             ++++  A  L  V+     +R 
Sbjct: 30  TTQTWVQYSITPDVAGKIARRKFKRSVISYSGPEKPGTIIIDTKARWLYHVQENGKAVRY 89

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR D  T     ++ R    P W  P  +I ++                       
Sbjct: 90  GIGVGR-DGFTWKGEEKVTRKAEWPGWTPPPEMIVRE----------------------- 125

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
                                    G  N M +  +   +    Y +H T E        
Sbjct: 126 ------------RKNGRRLPAFMAGGPKNPMGARALYLGN--TIYRIHGTNEDWSIGQ-- 169

Query: 337 RFETSGCVRV--RNIIDLDVWLLKDTP 361
              +SGC+R+   ++  L   +   T 
Sbjct: 170 -AVSSGCIRMLNEDVEHLYERVKIGTK 195


>gi|288936382|ref|YP_003440441.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|288891091|gb|ADC59409.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 329

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 124 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 183

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    +
Sbjct: 184 -----------------------------------YAAAGNPLPAVVPAGPDNPMGLYAL 208

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 209 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 256


>gi|17229032|ref|NP_485580.1| hypothetical protein alr1540 [Nostoc sp. PCC 7120]
 gi|17135360|dbj|BAB77906.1| alr1540 [Nostoc sp. PCC 7120]
          Length = 128

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++    L  G+S  +V  L+  L   G       +   F A  ++AV  FQ  +GL   G
Sbjct: 11  KVAEPVLRQGDSGAAVTELQRLLNAKG---VKVSVDGIFGAGTQAAVIKFQRANGLTADG 67

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +V S T  A+       +R+  + +N    +    Q   L ++   IPAA+L
Sbjct: 68  IVGSKTWVALRKVPTPTIRLVDVALNYDPTQ-FPHQVAALEWLQSQIPAATL 118


>gi|196047194|ref|ZP_03114410.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196021943|gb|EDX60634.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 186

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 66/229 (28%), Gaps = 72/229 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFR 406
              P  ++  I   VK++K+       +  V      A+   +  + F 
Sbjct: 141 DRIPIGTKVWI---VKSKKSFQQLAKEKGAV------AYEKANGKVGFF 180


>gi|56965585|ref|YP_177319.1| endopeptidase, cell wall lytic activity [Bacillus clausii KSM-K16]
 gi|56911831|dbj|BAD66358.1| cell wall lytic activity endopeptidase [Bacillus clausii KSM-K16]
          Length = 417

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L LG+ +  V  L+ +L   G  + +      +     SAV+ FQ  +GL   
Sbjct: 204 PASSTGSLRLGDRNSQVTDLQNQLRSLGYFNQNAT--GYYGEVTRSAVREFQKNNGLSAD 261

Query: 155 GMVDSSTLEAMNVPVDL 171
           G+    T   ++     
Sbjct: 262 GIAGPQTFAKLSNSPAP 278



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L +G+   SV  L+E L   G  + S      +      AV+ FQ  + L   
Sbjct: 118 PSSKTSLLRVGSRGGSVTALQEDLRKLGFFNQSPT--GYYGTVTRDAVRAFQRANNLQAD 175

Query: 155 GMVDSSTLEAMN 166
           G+   +T  A+ 
Sbjct: 176 GIAGPATQAALK 187



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 25/71 (35%), Gaps = 1/71 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G S   V  L+  L   G        +  F  +   AV  +Q  + L   G
Sbjct: 30  ALGDRTLRQGMSHPDVTELQNALKEKGFFT-YGTATGYFGTHTRDAVIAYQKANNLLVDG 88

Query: 156 MVDSSTLEAMN 166
           +    TL ++ 
Sbjct: 89  VAGPQTLSSLT 99


>gi|94676943|ref|YP_588889.1| hypothetical protein BCI_0448 [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94220093|gb|ABF14252.1| conserved hypothetical protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 315

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 70/246 (28%), Gaps = 61/246 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVG 222
             N  VD+ + +   NL+   +L+        +++NI    L     G    +   V +G
Sbjct: 73  EANPDVDVYLPESNTNLIFPTQLILPDTKHIGIIINIAEMRLYYYPKGTNKVVVLPVGIG 132

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
            + ++TP   + ++R    P W    +I ++                             
Sbjct: 133 ELGQETPCWVTSVHRKKHLPSWTPSNAIKKE----------------------------- 163

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                               G  N M    +   +      H T     F   +R  + G
Sbjct: 164 ------YKARGIIIPDVFPAGANNPMGLYALYIGNSYAI--HGTNAN--FGIGLR-ISHG 212

Query: 343 CVRVRNIIDLDVWLLKDTP-TWSRYHIEEVVK-----------------TRKTTPVKLAT 384
           C+R+R+  DL  +L    P       I E VK                 +          
Sbjct: 213 CIRLRD-NDL-KYLFDHVPVGVRVELINEPVKACIEPNGNRYLEVHDPLSTTAEQFNSHK 270

Query: 385 EVPVHF 390
            VP+H 
Sbjct: 271 PVPIHI 276


>gi|323143884|ref|ZP_08078548.1| protein ErfK/srfK [Succinatimonas hippei YIT 12066]
 gi|322416356|gb|EFY07026.1| protein ErfK/srfK [Succinatimonas hippei YIT 12066]
          Length = 301

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 54/197 (27%), Gaps = 49/197 (24%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQKD 254
           +++N     L    +  V +   + +G++   TP+   + + R    P W     +  + 
Sbjct: 94  IIINSAEMRLYYYHDNVVDI-LPIGIGQLGTDTPLNWVTAVQRKKAGPTWTPTAKMHAE- 151

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                                           G  N M    + 
Sbjct: 152 ----------------------------------YRARGEYLPAVWPAGPDNPMGLYALY 177

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----IE 369
                    H T     F   +R  + GCVR+RN      +L  + P  +R       I+
Sbjct: 178 IGRLYAI--HGTNAD--FGIGLR-VSHGCVRLRNED--IEYLFNNVPVGTRVQFINRPIK 230

Query: 370 EVVKTRKTTPVKLATEV 386
             ++      +++   +
Sbjct: 231 YAIEDNGNIYIEVHQPL 247


>gi|317969713|ref|ZP_07971103.1| protein erfK/srfK precursor [Synechococcus sp. CB0205]
          Length = 201

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 45/175 (25%), Gaps = 71/175 (40%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  +++G++  R    VG    +TP    R+   +  P W  P               
Sbjct: 67  RQLMVIKDGRMLHRYPAAVGTDGWETPAGSHRVLEKVAKPVWQHP--------------- 111

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY------ 316
                          G +V                     G  N + S  I F+      
Sbjct: 112 -------------GNGSQV-------------------PQGPKNPLGSRWIGFHRNCTPK 139

Query: 317 ------------SRNNT-YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
                       +       H TP         R  + GCVR+   N+ ++   +
Sbjct: 140 ENAWDGERYLSVNGCTVAGFHGTPHRWTVG---RAVSHGCVRLYEENVQEVFELV 191


>gi|126175624|ref|YP_001051773.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS155]
 gi|152999445|ref|YP_001365126.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS185]
 gi|217972124|ref|YP_002356875.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|304411043|ref|ZP_07392659.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|307301834|ref|ZP_07581592.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
 gi|125998829|gb|ABN62904.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS155]
 gi|151364063|gb|ABS07063.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS185]
 gi|217497259|gb|ACK45452.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS223]
 gi|304350578|gb|EFM14980.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS183]
 gi|306913872|gb|EFN44293.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica BA175]
          Length = 304

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK  +    + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    + +          G  N M 
Sbjct: 154 IRKE-----------------------------------YAAKGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+       L K+ P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRHED--IEHLFKNVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|16129076|ref|NP_415631.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89107959|ref|AP_001739.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|3025065|sp|P75954|YCFS_ECOLI RecName: Full=Probable L,D-transpeptidase YcfS; Flags: Precursor
 gi|1787356|gb|AAC74197.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|4062682|dbj|BAA35928.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
          Length = 320

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 56/188 (29%), Gaps = 43/188 (22%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++NI    L     GK       + +G++  D  TP + + ++    NP W  
Sbjct: 98  DAPREGIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                      +          G  N
Sbjct: 158 TANIRAR-----------------------------------YKAQGIELPAVVPAGLDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            M    I   +    Y +H T     F   +R  +SGC+R+R+  D+     + TP    
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKV 238

Query: 366 YHIEEVVK 373
             I   +K
Sbjct: 239 NIINTPIK 246


>gi|145298061|ref|YP_001140902.1| LysM domain-containing protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850833|gb|ABO89154.1| LysM domain protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 302

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK V     + +G++   TP    +++ R   NP W    +
Sbjct: 96  PREGIVINVAEMRLYYYPKGKNVVEVLPIGIGQLGVNTPENWITKVERKRANPTWTPTEN 155

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    + +          G  N M 
Sbjct: 156 IRRR-----------------------------------YAAQGKTLPAVWPAGPDNPMG 180

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  +SGCVR+R   D+  +L  + P  +R    
Sbjct: 181 LHALYIGNLYAI--HGTNA--TFGIGLR-VSSGCVRLR-ADDI-KYLFDNVPVGTRVQFV 233

Query: 370 EV 371
             
Sbjct: 234 NQ 235


>gi|24375244|ref|NP_719287.1| LysM domain-containing protein [Shewanella oneidensis MR-1]
 gi|24350038|gb|AAN56731.1|AE015808_7 LysM domain protein [Shewanella oneidensis MR-1]
          Length = 304

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK  +    + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    +            G  N M 
Sbjct: 154 IRKE-----------------------------------YAARGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+  D    L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRH--DDIEHLFKTVPIGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|291566539|dbj|BAI88811.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 543

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 20/247 (8%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           T+A  E        I++R    + P  P L  G+    V  L+ RL   G  +     + 
Sbjct: 44  TVASAESLTNRETQIVARATPTQNPTSPVLRRGSRGQDVAELQIRLRELGYFNNPNLGN- 102

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVD--------LRIRQLQVNLMRI 183
            F    + AV+ FQ   GL P G+V   T +A+  +P              Q        
Sbjct: 103 -FGPITQQAVRQFQSDRGLRPDGIVGQETRQALALIPPSPKTPEVPTTPPPQPTATQPPP 161

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR----QTPILHSRINRIM 239
                               ++    N   G ++ + + +              +++ + 
Sbjct: 162 PATPPAAKPPAAKPPAAKPPAININYNLPKGFQTAIALLKNPSFVEAPPRDPSGKMSHVK 221

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF--VEEVDWNSPEPPNFI 297
                + P+SI+         Q+  Y   + I + D     V    + + ++      F 
Sbjct: 222 TITGPIAPKSIVHSGQGLFFAQNMMY--RHTITVYDRNFDLVKTIPDSIKFSDFGFSKFT 279

Query: 298 FRQDPGK 304
                  
Sbjct: 280 GNHRGSP 286


>gi|307943635|ref|ZP_07658979.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307773265|gb|EFO32482.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 17/150 (11%)

Query: 22  MGLSLVEKPIHASVLDEIINES-YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
             L+  E  ++   +D  I       +  D  +     +      + P   K   A   +
Sbjct: 143 FVLAFAENNLNQ--IDAFIRFLERSGLSQDLREADFEAIAR--RYNGPGQVKHYAALMRR 198

Query: 81  AIAFYQDILSRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           A A        GG      +    L LG+    V+ L++RL   G      G    F   
Sbjct: 199 AYAKL------GGDQSDTHKDVNLLKLGSEGYRVEALQKRLASLGYTLRPDGD---FGPA 249

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            + AV  FQ+ HGL P G+V   T EA+  
Sbjct: 250 TKRAVVGFQVDHGLTPDGVVGPKTQEALEA 279


>gi|307943228|ref|ZP_07658573.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307774024|gb|EFO33240.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 399

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-L 102
              + ++  +     +      + P       +  + A   YQ I   G     P    L
Sbjct: 162 KSGLADELRERDFRAIAR--RYNGPGQVSHYASLMQAA---YQRIGKSGETTSNPRGRML 216

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V+ L+ERLI  G           F       V  FQ+ HGL P G+V   T 
Sbjct: 217 RLGSEGYRVKALQERLITLGY---HLQADGDFGPATRRQVVAFQVDHGLKPDGVVGPLTE 273

Query: 163 ----EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
               EA+ +       + ++ +  ++K   Q +     L     
Sbjct: 274 ERMDEAVPINASKIDGRTKLTVSDLRKRGSQTIKSADRLQQGAG 317


>gi|161503994|ref|YP_001571106.1| hypothetical protein SARI_02087 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865341|gb|ABX21964.1| hypothetical protein SARI_02087 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 306

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    +
Sbjct: 161 -----------------------------------YAAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|238893875|ref|YP_002918609.1| hypothetical protein KP1_1808 [Klebsiella pneumoniae NTUH-K2044]
 gi|238546191|dbj|BAH62542.1| hypothetical protein KP1_1808 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 358

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 153 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 212

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    +
Sbjct: 213 -----------------------------------YAAAGNPLPAVVPAGPDNPMGLYAL 237

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 238 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 285


>gi|117919296|ref|YP_868488.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. ANA-3]
 gi|117611628|gb|ABK47082.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. ANA-3]
          Length = 304

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK       + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    +            G  N M 
Sbjct: 154 IRKE-----------------------------------YAARGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+  D    L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRH--DDIEHLFKTVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|75911176|ref|YP_325472.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704901|gb|ABA24577.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 128

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++    L  G+S  +V  L+  L   G       +   F A  ++AV  FQ  +GL   G
Sbjct: 11  KVAEPLLRQGDSGAAVTELQRLLNAKG---VKVSVDGIFGAGTQAAVVKFQRANGLTADG 67

Query: 156 MVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +V S T  A+       +R+  + +N    +    Q   L ++   IPAA+L
Sbjct: 68  IVGSKTWVALRKVPTPTIRLVDVALNYDPTQ-FPHQVSALEWLQSQIPAATL 118


>gi|119773864|ref|YP_926604.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
 gi|119766364|gb|ABL98934.1| ErfK/YbiS/YcfS/YnhG [Shewanella amazonensis SB2B]
          Length = 304

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 54/188 (28%), Gaps = 44/188 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++NI    L     GK +     + +G+V R TP    + + R   NP 
Sbjct: 88  LILPDAPREGIVINIAEMRLYYYPKGKKIVEVLPIGIGQVGRDTPENWVTTVQRKRANPT 147

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P + I+K+  A                                             G
Sbjct: 148 WT-PTARIRKEYAAK----------------------------------GVTLPPVWPAG 172

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R+       L    P  
Sbjct: 173 PDNPMGLFALYIGNLYAI--HGTNA--TFGIGLR-VSQGCVRLRDTD--IEHLFNSVPVG 225

Query: 364 SRYHIEEV 371
           +R      
Sbjct: 226 TRVQFVNQ 233


>gi|114046387|ref|YP_736937.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-7]
 gi|113887829|gb|ABI41880.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-7]
          Length = 304

 Score = 73.5 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK       + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    +            G  N M 
Sbjct: 154 IRKE-----------------------------------YAARGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+  D    L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRH--DDIEHLFKTVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|291085657|ref|ZP_06353628.2| ErfK/YbiS/YcfS/YnhG family protein [Citrobacter youngae ATCC 29220]
 gi|291070558|gb|EFE08667.1| ErfK/YbiS/YcfS/YnhG family protein [Citrobacter youngae ATCC 29220]
          Length = 329

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 124 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 183

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 184 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 208

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 209 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 256


>gi|113971426|ref|YP_735219.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-4]
 gi|113886110|gb|ABI40162.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. MR-4]
          Length = 304

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 50/182 (27%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK       + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    +            G  N M 
Sbjct: 154 IRKE-----------------------------------YAARGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+  D    L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRH--DDIEHLFKTVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|118579012|ref|YP_900262.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118501722|gb|ABK98204.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 441

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 44/202 (21%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG---KV 213
           +  + + A N  VD  + +    ++     +      + +++N+    L   +     +V
Sbjct: 87  LGLNAISAANPGVDPWVPRAGERILLPLSFILPDAPRKGIVINLATMRLFHYKGSGTAQV 146

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V VG  DR TP   +R+ R    P W +P SI ++                    
Sbjct: 147 VSTYPVGVGAEDRPTPPGPTRVVRKAAKPTWHVPASIAER-------------------- 186

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                          +  +         PG  N +    +    +    +H T +P    
Sbjct: 187 ---------------HRMKGDILPASIPPGPDNPLGEYALYLG-KAGYLIHGTNKPASVG 230

Query: 334 NVVRFETSGCVRV--RNIIDLD 353
                 T+GC+R+   NI  L 
Sbjct: 231 ---LQATNGCMRLYPENIKTLF 249


>gi|297158109|gb|ADI07821.1| hypothetical protein SBI_04701 [Streptomyces bingchenggensis BCW-1]
          Length = 207

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 4/144 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G SS  V+ L+ RL   G    +      +     S+V  +Q  HGL  +G VD  T  +
Sbjct: 5   GTSSERVRELQARLRALGLFGRNPT--GYYGTVTRSSVLAYQRGHGLSATGSVDRRTWNS 62

Query: 165 MNVPVD--LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +        R          + K   + M  R + ++  + +L  + NGKV     V  G
Sbjct: 63  LRTATKRPTRDELYPPTTNPLAKPDPRCMTGRALCISKTSRTLAWMVNGKVVSAMDVRFG 122

Query: 223 RVDRQTPILHSRINRIMFNPYWVI 246
                T     +++    +    I
Sbjct: 123 SQYTPTREGLFQVDFKSRDHVSTI 146


>gi|157146538|ref|YP_001453857.1| hypothetical protein CKO_02299 [Citrobacter koseri ATCC BAA-895]
 gi|157083743|gb|ABV13421.1| hypothetical protein CKO_02299 [Citrobacter koseri ATCC BAA-895]
          Length = 306

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|218905286|ref|YP_002453120.1| hypothetical protein BCAH820_4170 [Bacillus cereus AH820]
 gi|228929197|ref|ZP_04092224.1| hypothetical protein bthur0010_38860 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228947867|ref|ZP_04110154.1| hypothetical protein bthur0007_39940 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229123670|ref|ZP_04252865.1| hypothetical protein bcere0016_39570 [Bacillus cereus 95/8201]
 gi|218537098|gb|ACK89496.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|228659805|gb|EEL15450.1| hypothetical protein bcere0016_39570 [Bacillus cereus 95/8201]
 gi|228811854|gb|EEM58188.1| hypothetical protein bthur0007_39940 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228830487|gb|EEM76097.1| hypothetical protein bthur0010_38860 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 186

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L +    G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|120597701|ref|YP_962275.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
 gi|146294162|ref|YP_001184586.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
 gi|120557794|gb|ABM23721.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella sp. W3-18-1]
 gi|145565852|gb|ABP76787.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella putrefaciens CN-32]
 gi|319427505|gb|ADV55579.1| L,D-transpeptidase, YbiS [Shewanella putrefaciens 200]
          Length = 304

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK  +    + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    + +          G  N M 
Sbjct: 154 IRKE-----------------------------------YAAKGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+       L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRHED--IEHLFKTVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|237730798|ref|ZP_04561279.1| protein ybiS [Citrobacter sp. 30_2]
 gi|226906337|gb|EEH92255.1| protein ybiS [Citrobacter sp. 30_2]
          Length = 306

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGVGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|283784580|ref|YP_003364445.1| hypothetical protein ROD_08211 [Citrobacter rodentium ICC168]
 gi|282948034|emb|CBG87598.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 306

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|206576156|ref|YP_002239536.1| YbiS protein [Klebsiella pneumoniae 342]
 gi|290510562|ref|ZP_06549932.1| L,D-transpeptidase YbiS [Klebsiella sp. 1_1_55]
 gi|206565214|gb|ACI06990.1| YbiS protein [Klebsiella pneumoniae 342]
 gi|289777278|gb|EFD85276.1| L,D-transpeptidase YbiS [Klebsiella sp. 1_1_55]
          Length = 304

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 99  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    +
Sbjct: 159 -----------------------------------YAAAGNPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 231


>gi|160874063|ref|YP_001553379.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS195]
 gi|160859585|gb|ABX48119.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS195]
 gi|315266295|gb|ADT93148.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella baltica OS678]
          Length = 304

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 51/182 (28%), Gaps = 44/182 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N+    L     GK  +    + +G++ + TP    + + R   NP W     
Sbjct: 94  PREGIVINVAEMRLYYYPKGKKTVEVLPIGIGQIGKDTPENWVTSVQRKRANPTWTPTPR 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           I ++                                    + +          G  N M 
Sbjct: 154 IRKE-----------------------------------YAAKGEILPAVWPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +      H T     F   +R  + GCVR+R+       L K  P  +R    
Sbjct: 179 LYALYIGNLYAI--HGTNA--SFGIGLR-VSQGCVRLRHED--IEHLFKTVPVGTRVQFV 231

Query: 370 EV 371
             
Sbjct: 232 NQ 233


>gi|304313391|ref|YP_003812989.1| hypothetical protein HDN1F_37840 [gamma proteobacterium HdN1]
 gi|301799124|emb|CBL47367.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 368

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 39/160 (24%)

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              V + R +  TP+  +++  +  +P W +P+SI ++   A   + P Y          
Sbjct: 126 TFPVSIARENWATPLGTTKVTGLFKDPAWFVPKSIQEEHKAAGEVEFPTYF--------- 176

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
                                     PG  N M    I+       ++H T  P      
Sbjct: 177 -------------------------PPGPNNPMGMLAIQLGFP-GIFIHGTNRPW--GVG 208

Query: 336 VRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
           +R  + GC+ +    D      +         I+E V   
Sbjct: 209 MRT-SHGCLHLY-PEDAANIFPQLKAGVPVRVIDEPVVAG 246


>gi|221214643|ref|ZP_03587613.1| putative peptidoglycan binding domain protein [Burkholderia
           multivorans CGD1]
 gi|221165533|gb|EED98009.1| putative peptidoglycan binding domain protein [Burkholderia
           multivorans CGD1]
          Length = 266

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 3/114 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +LI +G           + +    AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVAYLQRQLIAAG---ARIDADALYGSATRGAVVAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            T  A+             +L R    L+  +     +  + +     + +G+ 
Sbjct: 60  KTWAALAAGRRDPRHLTDADLQRAADRLKVDLAAVRAVNEVESRGAGFLPDGRP 113


>gi|311067920|ref|YP_003972843.1| murein transglycosylase [Bacillus atrophaeus 1942]
 gi|310868437|gb|ADP31912.1| murein transglycosylase [Bacillus atrophaeus 1942]
          Length = 168

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 55/149 (36%), Gaps = 13/149 (8%)

Query: 217 STVIVGRVDRQTPILHSRI---NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
             +    + R  P L + I    +I+  P    P SI    ++++  +  +  ++N +  
Sbjct: 22  FRIDQAALVRANPSLQTGILLAGQIIVIPGIPNPDSIPYHIVVSISGKTLRLFQNNRLI- 80

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
              K   + V ++   +P    +I  + P       +  +     +   +H T  P    
Sbjct: 81  ---KTYPIAVGKILTTTPTGEYYIVNRQPNPGGPFGAYWMSLSKLH-YGIHGTNNPSSIG 136

Query: 334 NVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                 + GC+R+ N  +++L   +   T
Sbjct: 137 K---AVSKGCIRMYNKDVVELASIVPNGT 162


>gi|118479343|ref|YP_896494.1| hypothetical protein BALH_3760 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118418568|gb|ABK86987.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 188

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 19  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 74

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 75  -----------------AKDPYYIAKN------------------------------IPG 87

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 88  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 142

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 143 DRIPIGTKVWIVKSKKSFQ 161


>gi|54297508|ref|YP_123877.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris]
 gi|53751293|emb|CAH12704.1| hypothetical protein lpp1553 [Legionella pneumophila str. Paris]
          Length = 244

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP W    
Sbjct: 93  NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRITSKEINPTWRPTV 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                  +    +                                        PG  N +
Sbjct: 153 K------LQKAAESIGA-----------------------------PIPSEFPPGPHNPL 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H +             ++GC+R+   +I  L   +   TP
Sbjct: 178 GQHVLRLGWP-AILIHGSNRVDGIGAK---VSAGCIRMLPEDIEHLYSLVSVGTP 228


>gi|223937774|ref|ZP_03629675.1| ErfK/YbiS/YcfS/YnhG family protein [bacterium Ellin514]
 gi|223893567|gb|EEF60027.1| ErfK/YbiS/YcfS/YnhG family protein [bacterium Ellin514]
          Length = 393

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 79/270 (29%), Gaps = 53/270 (19%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE--AMNVPVDLRIRQLQVNLMRI 183
            S           ++A+  +Q +  L  +G +D+ T     +     ++      +L R+
Sbjct: 128 SSGSADGVSGFQTKAALMAYQRQSHLPINGELDALTKTNLLLEDTPFVKYLITSNDLARL 187

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + +    +G            +E V   +    S   + +++   P ++     +     
Sbjct: 188 QPVATTWLGKSQQTALDYENIVELVA--EKSFASPTFIRKLN---PNINW--TNVTPGTL 240

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK------------------------ 279
             +P S    ++ +       +L    +   D +                          
Sbjct: 241 VQVPNS-YYPEVHSKAAFLRIHLSGKTLEAFDSETNLLVHFPCSIAKRVEKRPVGELHVA 299

Query: 280 EVFVEEVDWNSPEPPNFI-----------FRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            V        + +P  F                PG  N +    I    R    +H TP+
Sbjct: 300 VVAPNPN--YTFDPAIFPESPEAQSIGHKLVLPPGPNNPVGVAWIGL-DRQGYGIHGTPK 356

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLK 358
           P       R E+ GC R+ N      +L+K
Sbjct: 357 PEEVG---RTESHGCFRLANWN--AEYLIK 381


>gi|49480911|ref|YP_038213.1| ErfK/SrfK protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49332467|gb|AAT63113.1| conserved hypothetical protein, possible ErfK/SrfK protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 186

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             ++P Y+  N                                 
Sbjct: 73  -----------------AKNPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|152969406|ref|YP_001334515.1| hypothetical protein KPN_00849 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262041092|ref|ZP_06014310.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330008437|ref|ZP_08306249.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
 gi|150954255|gb|ABR76285.1| hypothetical protein KPN_00849 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259041542|gb|EEW42595.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328535134|gb|EGF61643.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
          Length = 304

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 99  IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    +
Sbjct: 159 -----------------------------------YAAAGNPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 231


>gi|30264225|ref|NP_846602.1| hypothetical protein BA_4372 [Bacillus anthracis str. Ames]
 gi|47529667|ref|YP_021016.1| hypothetical protein GBAA_4372 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187053|ref|YP_030305.1| hypothetical protein BAS4055 [Bacillus anthracis str. Sterne]
 gi|52141347|ref|YP_085481.1| erfK/srfK protein [Bacillus cereus E33L]
 gi|165871099|ref|ZP_02215749.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167639420|ref|ZP_02397691.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170687312|ref|ZP_02878530.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170705833|ref|ZP_02896296.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652648|ref|ZP_02935064.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190566228|ref|ZP_03019147.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|196034816|ref|ZP_03102223.1| conserved hypothetical protein [Bacillus cereus W]
 gi|227816926|ref|YP_002816935.1| hypothetical protein BAMEG_4409 [Bacillus anthracis str. CDC 684]
 gi|229093210|ref|ZP_04224328.1| hypothetical protein bcere0021_39450 [Bacillus cereus Rock3-42]
 gi|229600370|ref|YP_002868445.1| hypothetical protein BAA_4391 [Bacillus anthracis str. A0248]
 gi|254683915|ref|ZP_05147775.1| hypothetical protein BantC_08690 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254721750|ref|ZP_05183539.1| hypothetical protein BantA1_04685 [Bacillus anthracis str. A1055]
 gi|254736263|ref|ZP_05193969.1| hypothetical protein BantWNA_13971 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254754065|ref|ZP_05206100.1| hypothetical protein BantV_16420 [Bacillus anthracis str. Vollum]
 gi|254758242|ref|ZP_05210269.1| hypothetical protein BantA9_08030 [Bacillus anthracis str.
           Australia 94]
 gi|301055643|ref|YP_003793854.1| ErfK/SrfK protein [Bacillus anthracis CI]
 gi|30258870|gb|AAP28088.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47504815|gb|AAT33491.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49180980|gb|AAT56356.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|51974816|gb|AAU16366.1| conserved hypothetical protein; possible erfK/srfK protein
           [Bacillus cereus E33L]
 gi|164713018|gb|EDR18545.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512479|gb|EDR87854.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170129373|gb|EDS98237.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170668929|gb|EDT19674.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172081983|gb|EDT67051.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190563147|gb|EDV17113.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|195992355|gb|EDX56316.1| conserved hypothetical protein [Bacillus cereus W]
 gi|227003866|gb|ACP13609.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|228690184|gb|EEL43978.1| hypothetical protein bcere0021_39450 [Bacillus cereus Rock3-42]
 gi|229264778|gb|ACQ46415.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
 gi|300377812|gb|ADK06716.1| conserved hypothetical ErfK/SrfK protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 186

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|330839341|ref|YP_004413921.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
 gi|329747105|gb|AEC00462.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
          Length = 220

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                +G+    V  ++ RL   G           F      AVK FQ  HGL+  G+V 
Sbjct: 23  ASAFRIGDQGSDVAEIQGRLASLGY---DVAADGDFGPATAEAVKAFQSAHGLEADGLVG 79

Query: 159 SSTLEAM 165
           S+T  A+
Sbjct: 80  SATYSAL 86


>gi|260886859|ref|ZP_05898122.1| endopeptidase, cell wall lytic activity [Selenomonas sputigena ATCC
           35185]
 gi|260863458|gb|EEX77958.1| endopeptidase, cell wall lytic activity [Selenomonas sputigena ATCC
           35185]
          Length = 216

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                +G+    V  ++ RL   G           F      AVK FQ  HGL+  G+V 
Sbjct: 19  ASAFRIGDQGSDVAEIQGRLASLGY---DVAADGDFGPATAEAVKAFQSAHGLEADGLVG 75

Query: 159 SSTLEAM 165
           S+T  A+
Sbjct: 76  SATYSAL 82


>gi|225866132|ref|YP_002751510.1| hypothetical protein BCA_4259 [Bacillus cereus 03BB102]
 gi|229186394|ref|ZP_04313558.1| hypothetical protein bcere0004_39390 [Bacillus cereus BGSC 6E1]
 gi|225788457|gb|ACO28674.1| conserved hypothetical protein [Bacillus cereus 03BB102]
 gi|228597021|gb|EEK54677.1| hypothetical protein bcere0004_39390 [Bacillus cereus BGSC 6E1]
          Length = 186

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|253702665|ref|YP_003023854.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
 gi|251777515|gb|ACT20096.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M21]
          Length = 409

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 44/210 (20%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE---NGKV 213
           +  + + A N  VD+ + +    ++     +      + +++N+    L   +    G+V
Sbjct: 56  LGINAISAANPGVDVWVPEPGKEIILPLSFILPDAPRKGIVINLATMRLFRFKEDSKGQV 115

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V VG  +R TP    R+ R    P W +P SI +                     
Sbjct: 116 VSTYPVGVGTAERPTPTGKMRVERKTALPTWYVPASIAED-------------------- 155

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                          +  +      +  PG  N +    +    +    +H T +P    
Sbjct: 156 ---------------HKKKGDLLPAKVPPGPENPLGERALYLS-KAGYLIHGTNKPASIG 199

Query: 334 NVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                 T+GC+R+   N++ L      +TP
Sbjct: 200 ---LKATNGCLRLYPENVMTLYEETPVNTP 226


>gi|302391951|ref|YP_003827771.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
 gi|302204028|gb|ADL12706.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
          Length = 312

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 72/253 (28%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  L+  L   G  D    L+  ++     AVK FQ  + L  +G+V+ S  + +
Sbjct: 45  MEGNDIWELQRELKKLGFYDQQ--LNSTYNWSTYLAVKEFQKANDLPTTGVVNESIWQQI 102

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
              +    +  + +   +    E   G  ++L++     +    +G+      V VG+  
Sbjct: 103 AHKLKKGEKITEASSDDL----EAPEGEVFLLIDTYKKKMTVYSDGEPYHEFPVAVGKPS 158

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            ++PI    I  I  + +W                                 G       
Sbjct: 159 TKSPIGEWAI--IAKDAHWG-----------------------------GGFGVRWMRLN 187

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           V W                        I   ++          P          + GC+R
Sbjct: 188 VPW--------------------GIFGIHGTNK----------PGSIGT---AASHGCIR 214

Query: 346 VRN--IIDLDVWL 356
           + N  +  L  W+
Sbjct: 215 MYNRHVKILYSWV 227



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V   +E+L   G           F    E A+K F+  +GL      D +T
Sbjct: 248 LRPGQTGKDVLLFQEKLREYGF--DPGYTDGRFGDSTEKAIKEFKYIYGLQDDLTADQNT 305

Query: 162 L 162
            
Sbjct: 306 F 306


>gi|171914584|ref|ZP_02930054.1| hypothetical protein VspiD_25435 [Verrucomicrobium spinosum DSM
           4136]
          Length = 327

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 69/228 (30%), Gaps = 58/228 (25%)

Query: 136 AYVESAV--------KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL- 186
           A +  AV        K F+  +G           L+  +  +  ++    VN ++     
Sbjct: 132 ASLVEAVAEKFHCDEKFFRQLNGGKTDA------LKEGDEVLVPKVEPFDVNTVKTFAPG 185

Query: 187 --LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             + +  G   V V      LE V+  K+     V +G  +  TP     I  +      
Sbjct: 186 HAMPEGQGKTLVRVLSSNNMLEVVQGDKIAAAFPVTIGSTETGTPTGIWTIEGM------ 239

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                    +     R+D + LK+                           F+    PG 
Sbjct: 240 ---------ERFPKFRRDEKMLKEG---------------------ERSGKFLMI-PPGP 268

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            N +    IE   R    +H T  P       R ++ GC+R+ N   L
Sbjct: 269 NNDVGVIWIEL-DRKGLGIHGTKAPDSIG---RADSHGCIRLANWDVL 312


>gi|197263123|ref|ZP_03163197.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197241378|gb|EDY23998.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|24112186|ref|NP_706696.1| hypothetical protein SF0769 [Shigella flexneri 2a str. 301]
 gi|30062302|ref|NP_836473.1| hypothetical protein S0812 [Shigella flexneri 2a str. 2457T]
 gi|110804818|ref|YP_688338.1| hypothetical protein SFV_0802 [Shigella flexneri 5 str. 8401]
 gi|24051026|gb|AAN42403.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040547|gb|AAP16279.1| hypothetical protein S0812 [Shigella flexneri 2a str. 2457T]
 gi|110614366|gb|ABF03033.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281600144|gb|ADA73128.1| hypothetical protein SFxv_0839 [Shigella flexneri 2002017]
 gi|332763026|gb|EGJ93271.1| hypothetical protein SFK671_0892 [Shigella flexneri K-671]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++      P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVEHKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|213051893|ref|ZP_03344771.1| hypothetical protein Salmoneentericaenterica_02525 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|168263654|ref|ZP_02685627.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|205347721|gb|EDZ34352.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 233


>gi|194444059|ref|YP_002040076.1| hypothetical protein SNSL254_A0905 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194402722|gb|ACF62944.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 233


>gi|16759756|ref|NP_455373.1| hypothetical protein STY0878 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|16764199|ref|NP_459814.1| hypothetical protein STM0837 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|29142471|ref|NP_805813.1| hypothetical protein t2050 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62179404|ref|YP_215821.1| hypothetical protein SC0834 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614906|ref|YP_001588871.1| hypothetical protein SPAB_02660 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550465|ref|ZP_02344222.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167992079|ref|ZP_02573177.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168230745|ref|ZP_02655803.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168240711|ref|ZP_02665643.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168466444|ref|ZP_02700306.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820007|ref|ZP_02832007.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194450082|ref|YP_002044868.1| hypothetical protein SeHA_C0968 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469167|ref|ZP_03075151.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197250503|ref|YP_002145796.1| hypothetical protein SeAg_B0877 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|200390414|ref|ZP_03217025.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204930038|ref|ZP_03221059.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205352092|ref|YP_002225893.1| hypothetical protein SG0816 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856273|ref|YP_002242924.1| hypothetical protein SEN0782 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213428081|ref|ZP_03360831.1| hypothetical protein SentesTyphi_22365 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213613157|ref|ZP_03370983.1| hypothetical protein SentesTyp_11989 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648360|ref|ZP_03378413.1| hypothetical protein SentesTy_14384 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850213|ref|ZP_03381111.1| hypothetical protein SentesT_00923 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224582650|ref|YP_002636448.1| hypothetical protein SPC_0835 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238913904|ref|ZP_04657741.1| hypothetical protein SentesTe_22615 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289825093|ref|ZP_06544440.1| hypothetical protein Salmonellentericaenterica_07151 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25323526|pir||AC0602 probable exported protein ybiS [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16419343|gb|AAL19773.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16502049|emb|CAD05285.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138102|gb|AAO69673.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62127037|gb|AAX64740.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161364270|gb|ABX68038.1| hypothetical protein SPAB_02660 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408386|gb|ACF68605.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194455531|gb|EDX44370.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|195630971|gb|EDX49557.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197214206|gb|ACH51603.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199602859|gb|EDZ01405.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|204321032|gb|EDZ06233.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205271873|emb|CAR36710.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205324612|gb|EDZ12451.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205329651|gb|EDZ16415.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205334655|gb|EDZ21419.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205339814|gb|EDZ26578.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343225|gb|EDZ29989.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|206708076|emb|CAR32367.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467177|gb|ACN45007.1| hypothetical protein SPC_0835 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261246093|emb|CBG23896.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992589|gb|ACY87474.1| hypothetical protein STM14_977 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157421|emb|CBW16910.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911861|dbj|BAJ35835.1| hypothetical protein STMDT12_C08920 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320085112|emb|CBY94899.1| Uncharacterized protein ybiS Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322616313|gb|EFY13222.1| hypothetical protein SEEM315_11928 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619563|gb|EFY16438.1| hypothetical protein SEEM971_16922 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622741|gb|EFY19586.1| hypothetical protein SEEM973_14035 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628653|gb|EFY25440.1| hypothetical protein SEEM974_17673 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631590|gb|EFY28346.1| hypothetical protein SEEM201_21188 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637117|gb|EFY33820.1| hypothetical protein SEEM202_02640 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641684|gb|EFY38320.1| hypothetical protein SEEM954_16820 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644522|gb|EFY41062.1| hypothetical protein SEEM054_05584 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648456|gb|EFY44908.1| hypothetical protein SEEM675_16963 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654191|gb|EFY50514.1| hypothetical protein SEEM965_13287 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658106|gb|EFY54373.1| hypothetical protein SEEM19N_19611 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663580|gb|EFY59782.1| hypothetical protein SEEM801_12442 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670316|gb|EFY66456.1| hypothetical protein SEEM507_19219 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671552|gb|EFY67674.1| hypothetical protein SEEM877_10228 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676908|gb|EFY72975.1| hypothetical protein SEEM867_08376 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682833|gb|EFY78852.1| hypothetical protein SEEM180_07427 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686512|gb|EFY82494.1| hypothetical protein SEEM600_06405 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322713875|gb|EFZ05446.1| putative L,D-transpeptidase YbiS [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323129143|gb|ADX16573.1| putative L,D-transpeptidase YbiS [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323194591|gb|EFZ79784.1| hypothetical protein SEEM581_07814 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196819|gb|EFZ81963.1| hypothetical protein SEEM501_08457 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204830|gb|EFZ89825.1| hypothetical protein SEEM460_08124 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208941|gb|EFZ93878.1| hypothetical protein SEEM020_19505 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213926|gb|EFZ98696.1| hypothetical protein SEEM6152_16220 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215222|gb|EFZ99967.1| hypothetical protein SEEM0077_11173 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220858|gb|EGA05296.1| hypothetical protein SEEM0047_18284 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323229900|gb|EGA14023.1| hypothetical protein SEEM0052_13717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233125|gb|EGA17221.1| hypothetical protein SEEM3312_03669 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240860|gb|EGA24902.1| hypothetical protein SEEM5258_13279 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243177|gb|EGA27197.1| hypothetical protein SEEM1156_06206 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248716|gb|EGA32644.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251720|gb|EGA35587.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257532|gb|EGA41220.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261465|gb|EGA45046.1| hypothetical protein SEEM8284_13299 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267896|gb|EGA51375.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272037|gb|EGA55452.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326627133|gb|EGE33476.1| Putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
 gi|332987768|gb|AEF06751.1| hypothetical protein STMUK_0842 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|168236775|ref|ZP_02661833.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194734785|ref|YP_002113930.1| hypothetical protein SeSA_A0989 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194710287|gb|ACF89508.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197290178|gb|EDY29535.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 306

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 233


>gi|313650280|gb|EFS14692.1| hypothetical protein SF2457T_1286 [Shigella flexneri 2a str. 2457T]
 gi|332759725|gb|EGJ90028.1| hypothetical protein SF434370_1017 [Shigella flexneri 4343-70]
 gi|332760500|gb|EGJ90789.1| hypothetical protein SF274771_0928 [Shigella flexneri 2747-71]
 gi|333006612|gb|EGK26111.1| hypothetical protein SFVA6_1243 [Shigella flexneri VA-6]
 gi|333006979|gb|EGK26474.1| hypothetical protein SFK218_1151 [Shigella flexneri K-218]
 gi|333009550|gb|EGK29002.1| hypothetical protein SFK272_1177 [Shigella flexneri K-272]
 gi|333020479|gb|EGK39742.1| hypothetical protein SFK227_0993 [Shigella flexneri K-227]
 gi|333021026|gb|EGK40284.1| hypothetical protein SFK304_1007 [Shigella flexneri K-304]
          Length = 304

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++      P W     +  +
Sbjct: 99  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVEHKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 159 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 231


>gi|332711428|ref|ZP_08431360.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349977|gb|EGJ29585.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 269

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +VQ+L+ RL   G L     +   F    ++AV+  Q +  L+P G+V  +T
Sbjct: 206 LRQGMRGPAVQQLQRRLKSLGFLK--ATVDGVFGEVTKAAVQAAQRKFKLEPDGIVGPAT 263

Query: 162 LEAM 165
             A+
Sbjct: 264 WNAL 267



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 48/182 (26%), Gaps = 10/182 (5%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            +       ++    L +G+    V  L+  L + G       ++  +      AV   Q
Sbjct: 39  KLAQAITPVKINRPTLDIGSEGERVSELQAVLKLLGYYTGE--VNGFYGDNTAIAVSKLQ 96

Query: 147 MRHGLDPSGMVDSSTLEAM--NVPVDLRIRQLQVNLMR--IKKLLEQKMGLRYVLVNIPA 202
              GL P G++ ++    +  ++P +        N +    +       G+       P 
Sbjct: 97  REAGLTPHGIMGAAEWNLLFPSIPPNPTSSTSTSNPLPSASRTPPTTSDGISASSFPTP- 155

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
                 E       +          T   +                S I   ++    + 
Sbjct: 156 ---SITEAITQTTTTRPNPSSPATSTSFGNRTTTTGNSVTVERTKPSAITLPILRQGMRG 212

Query: 263 PQ 264
           P 
Sbjct: 213 PA 214


>gi|321226415|gb|EFX51466.1| L,D-transpeptidase YbiS [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 246

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 233


>gi|332767984|gb|EGJ98170.1| L,D-transpeptidase YbiS [Shigella flexneri 2930-71]
          Length = 302

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 46/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++      P W     +  +
Sbjct: 97  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVEHKKAGPTWTPTAKMHAE 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 157 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 181

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 182 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 229


>gi|228916787|ref|ZP_04080352.1| hypothetical protein bthur0012_40010 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228842974|gb|EEM88057.1| hypothetical protein bthur0012_40010 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 186

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|224825429|ref|ZP_03698534.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224602350|gb|EEG08528.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 348

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 47/195 (24%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAV------ENGKVGLRSTVIVGRVDRQTPILHSRI 235
           R   L  +      V++NIP   L         +  +  +   + + R    TP+  +RI
Sbjct: 85  RQFILPPKPWQG--VVLNIPQRRLYYFPATTKGQPPQQVITYPISIAREGWSTPLGATRI 142

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
                +P W +P+SI  + +     + P+Y                              
Sbjct: 143 KAKFKDPAWFVPKSIRDEHLREDGVELPEYF----------------------------- 173

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                 PG  N M    ++       ++H T  P      +R  + GC+ +    D    
Sbjct: 174 -----PPGPDNPMGMLAMQTGFP-GIFIHATNRPW--GVGLRT-SHGCLHLY-PEDAAQI 223

Query: 356 LLKDTPTWSRYHIEE 370
             +         I+E
Sbjct: 224 FPQMKVGTPVRVIDE 238


>gi|229031796|ref|ZP_04187785.1| hypothetical protein bcere0028_38450 [Bacillus cereus AH1271]
 gi|228729542|gb|EEL80530.1| hypothetical protein bcere0028_38450 [Bacillus cereus AH1271]
          Length = 186

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  ++ +
Sbjct: 141 DRIPIGTKVWIVKSKQSFQ 159


>gi|300863516|ref|ZP_07108468.1| putative Peptidoglycan-binding domain 1 [Oscillatoria sp. PCC 6506]
 gi|300338472|emb|CBN53610.1| putative Peptidoglycan-binding domain 1 [Oscillatoria sp. PCC 6506]
          Length = 224

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 21/153 (13%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
           EK +        +      +    F+      D G       +S  +  Q  K +     
Sbjct: 77  EKTVSKGAKGAEVAAIQKRLQAHGFNVGAIDSDFGSR----TVSAVSAFQQSKGL-KADG 131

Query: 88  ILSRGGWPEL--------------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           I+ R  W  L                + L  G +   V+ L+ RL + G       +   
Sbjct: 132 IVDRTTWDALKDEPMVLAQKQIPESSKVLAKGAAGSKVKTLQVRLEMQGY--DPGPIDGI 189

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           F A   +AVK FQ  + L   G VD +T +A+ 
Sbjct: 190 FGARTLTAVKDFQATNNLKVDGTVDEATWKALG 222



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           YQ +      P    + +  G     V  +++RL   G       +   F +   SAV  
Sbjct: 67  YQGLQE----PPKKEKTVSKGAKGAEVAAIQKRLQAHGF--NVGAIDSDFGSRTVSAVSA 120

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           FQ   GL   G+VD +T +A+     +  ++
Sbjct: 121 FQQSKGLKADGIVDRTTWDALKDEPMVLAQK 151


>gi|251790932|ref|YP_003005653.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
 gi|247539553|gb|ACT08174.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya zeae Ech1591]
          Length = 358

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 67/280 (23%)

Query: 124 LDPSKGLSVAFDAYVE--------SAVKLF--QMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
                  S      ++         A++ F  Q + GL          L   N  +D+ +
Sbjct: 27  YPLPAPNSRLVGENLQVTIPSDSTDALEHFAAQYQMGLSN--------LLEANPGIDVYL 78

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-L 231
            +    +   ++L+        +++N     L     G K  +   + +G++ + TPI  
Sbjct: 79  PKPGSTMTVPQQLILPDTPREGIVINSAEMRLYYFPKGSKTVVVLPIGIGQLGKDTPINW 138

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            + + R    P W    ++  +           Y                          
Sbjct: 139 VTSVQRKKERPTWTPTAAMHAE-----------YAARGEF-------------------- 167

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                      G  N M    +   +      H T     F   +R  + GCVR+R+   
Sbjct: 168 ----LPKVYPAGPDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRDKD- 217

Query: 352 LDVWLLKDTPTWSR-----YHIEEVVKTRKTTPVKLATEV 386
              +L    P  +R       ++  V+   +  V++   +
Sbjct: 218 -IKYLFDHVPVGTRVQFINEPVKATVEPDGSRYVEVHNPL 256


>gi|114567403|ref|YP_754557.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338338|gb|ABI69186.1| ErfK/YbiS/YcfS/YnhG [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 332

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 74/205 (36%), Gaps = 24/205 (11%)

Query: 89  LSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           + R  +P L    PL  G S   V  ++ RL   G        S  ++      ++LFQ+
Sbjct: 51  IDRTDFPSLFLAEPLLEGES---VWLVQARLKELGY---DIQPSGIYNLPTSQIIRLFQV 104

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             GL+ +G+V+    EA+    D     LQ +    +       G   + +++ +  L  
Sbjct: 105 ASGLEENGVVNRPVWEALLFS-DAGEPCLQGDSQDKR-------GRLLIEIDVASRKLVL 156

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN------PYW---VIPRSIIQKDMMAL 258
            E+GK+     V VG+    TP+   ++     N        W    +P  I        
Sbjct: 157 TEDGKLVKEYPVAVGKSKTPTPLGEWKVVHKGLNWGNGFGTRWMGLNVPWGIYGIHGTNK 216

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFV 283
                 Y     I M +   +E++ 
Sbjct: 217 PGSIGSYASHGCIRMFNRHVEELYP 241



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            N   +  +        Y +H T +P    +   + + GC+R+ N  + +L   +   T
Sbjct: 192 GNGFGTRWMGLNVPWGIYGIHGTNKPGSIGS---YASHGCIRMFNRHVEELYPLVPAGT 247



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%)

Query: 73  ETIAQTEKAIAFYQDILSRGG-WPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           E +     A    + I+  G  +P+ L    L   +S   V  ++ RL   G        
Sbjct: 237 EELYPLVPAGTRVR-IVENGKMFPQDLKPVLLKKNSSGQRVVYVQSRLKELGL--EFDRA 293

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +    E AVK FQ   GL+ +G +D +T  AM +
Sbjct: 294 DGRYGNMTELAVKYFQAWRGLEATGEMDEATYRAMGM 330


>gi|149186655|ref|ZP_01864966.1| hypothetical protein ED21_29191 [Erythrobacter sp. SD-21]
 gi|148829563|gb|EDL48003.1| hypothetical protein ED21_29191 [Erythrobacter sp. SD-21]
          Length = 406

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 42/175 (24%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  +  ++V+    +L A ++ K+    TV  G  +   PI    I  I  NP +   
Sbjct: 266 SDQPQVDRIVVSKSEDTLRAYQDDKLVALFTVSSGSSEFPLPIGEWDILGIAQNPPF--- 322

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                 D    + +     +  +  +                            PG    
Sbjct: 323 ------DYDPRVLEGDDDAEGESYTL---------------------------PPGPNGP 349

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID--LDVWLLKDT 360
           +    I+    +   +H TPEP       R ++ GCVR+ N     L   + + T
Sbjct: 350 VGVVWIDLSKEH-YGIHGTPEPQTIG---RAQSHGCVRLTNWDAARLARMVSQST 400


>gi|56414064|ref|YP_151139.1| hypothetical protein SPA1916 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362987|ref|YP_002142624.1| hypothetical protein SSPA1786 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128321|gb|AAV77827.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094464|emb|CAR59980.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 306

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHTE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 233


>gi|83588974|ref|YP_428983.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
 gi|83571888|gb|ABC18440.1| ErfK/YbiS/YcfS/YnhG [Moorella thermoacetica ATCC 39073]
          Length = 294

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P  PL  G  S  V  L+ RL   G           +    E AVK FQ+ HGL  +G
Sbjct: 217 TMPTGPLKPGQGSPEVITLQARLREKGFYLF-GPTDGDYGLMTELAVKEFQLYHGLTATG 275

Query: 156 MVDSSTLEAMNVPV 169
           + D+ TL A+   V
Sbjct: 276 VADARTLRALGFDV 289



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 21/207 (10%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + + V  L+ RL   G       L+  ++   + AV  FQ  H L P G V  +T + + 
Sbjct: 28  TGLDVSDLQLRLAQMGYY--FGPLNGIYNKTTQRAVINFQREHHLTPLGRVGPATWKEL- 84

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                  R + V                 ++++     L  + +G+V  +  V +G+   
Sbjct: 85  ------ARGIAVAHQAPAGPPPG--KNLKIVIDTERLVLTILVDGRVFQKYPVAIGKYTS 136

Query: 227 QTPILHSRINRI------MFNPYW---VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            +P+   +I          F   W    +P                         M +E 
Sbjct: 137 PSPVGEWKIVDKAYESGGAFGTRWMGLNVPWGNYGIHGTNRPWSIGWAASAGCFRMFNED 196

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            + ++   +   +P      +    G 
Sbjct: 197 IETIYPW-IPVGTPVVVKGPYTMPTGP 222



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 40/151 (26%), Gaps = 14/151 (9%)

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
                +GRV   T    +R   +        P     K ++   R     L D  +    
Sbjct: 68  HHLTPLGRVGPATWKELARGIAVAHQAPAGPPPGKNLKIVIDTERLVLTILVDGRVFQKY 127

Query: 276 --EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILF 332
               GK      V         +          A  +  +          +H T  P   
Sbjct: 128 PVAIGKYTSPSPVGEWKIVDKAYE------SGGAFGTRWMGLNVPWGNYGIHGTNRPWSI 181

Query: 333 NNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                  ++GC R+   +I  +  W+   TP
Sbjct: 182 GW---AASAGCFRMFNEDIETIYPWIPVGTP 209


>gi|218548340|ref|YP_002382131.1| hypothetical protein EFER_0962 [Escherichia fergusonii ATCC 35469]
 gi|218355881|emb|CAQ88496.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|324112743|gb|EGC06719.1| ykud domain-containing protein [Escherichia fergusonii B253]
 gi|325496754|gb|EGC94613.1| hypothetical protein ECD227_0851 [Escherichia fergusonii ECD227]
          Length = 306

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEQVPVGTRVQF 233


>gi|167633509|ref|ZP_02391833.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|254744152|ref|ZP_05201835.1| hypothetical protein BantKB_24635 [Bacillus anthracis str. Kruger
           B]
 gi|167530915|gb|EDR93602.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
          Length = 186

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 58/200 (29%), Gaps = 65/200 (32%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                P
Sbjct: 73  -----------------AKDPYYIAKN-------------------------------IP 84

Query: 303 G--KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           G    N + S  + F       +   +H T +P        + + GC+R++       +L
Sbjct: 85  GESPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYL 139

Query: 357 LKDTPTWSRYHIEEVVKTRK 376
               P  ++  I +  K+ +
Sbjct: 140 FDRIPIGTKVWIVKSKKSFQ 159


>gi|328952431|ref|YP_004369765.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328452755|gb|AEB08584.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 314

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 67/219 (30%), Gaps = 58/219 (26%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
              +        ++VN     L    +N    +   + +G +D +TP    ++     NP
Sbjct: 95  TTWIVPDHPEHPIIVNTGEMRLYFFTDNFTKVITYPIGMGVLDFKTPTGVFKVTEKKTNP 154

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W +P+++  K                 + +++                           
Sbjct: 155 PWFVPKTLQAKY---------------GMSVMES-------------------------- 173

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
           G  N +   K+     +   +H T +P  F    R  + GC R+   +I  L   +    
Sbjct: 174 GPDNPLGKYKLTLSWGD-YGIHGTSQP--FGVG-RLVSHGCTRMYPEHIEKLFPLV---K 226

Query: 361 PTWSRYHIEE-VVKTRKTTPVKLA------TEVPVHFVY 392
              S  +I E V+   +   + L+        +P    Y
Sbjct: 227 VGTSVEYIYEPVMIGVRNGRIYLSVNQDFYHRLPDMLTY 265


>gi|282898177|ref|ZP_06306168.1| ErfK/YbiS/YcfS/YnhG [Raphidiopsis brookii D9]
 gi|281196708|gb|EFA71613.1| ErfK/YbiS/YcfS/YnhG [Raphidiopsis brookii D9]
          Length = 198

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 45/166 (27%), Gaps = 52/166 (31%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            E       V+V++    +      +V     + VG+   +TP    ++     +P W  
Sbjct: 65  PEAGNNQTDVVVDLSDRRVYVYLYDQVVASYPIAVGKKGWETPTGTFKVIHKEHHPIWKH 124

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P +    +                                                G  +
Sbjct: 125 PITGKIFE-----------------------------------------------AGTDS 137

Query: 307 AMASTKIEFYS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +    I F+S  +N    H TP   L        + GC+R+RN  
Sbjct: 138 PLGDRWIGFWSDGKNEIGFHGTPNKDLIG---GAVSHGCLRMRNSD 180


>gi|52841825|ref|YP_095624.1| hypothetical protein lpg1595 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628936|gb|AAU27677.1| hypothetical protein lpg1595 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 244

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP W    
Sbjct: 93  NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINPTWRPTV 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                  +    +                                        PG  N +
Sbjct: 153 K------LQKAAESIGA-----------------------------PIPSEFPPGPHNPL 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H +             ++GC+R+   +I  L   +   TP
Sbjct: 178 GQHVLRLGWP-AILIHGSNRVDGIGAK---VSAGCIRMLPEDIEHLYSLVSVGTP 228


>gi|332708202|ref|ZP_08428192.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332353028|gb|EGJ32578.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 435

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 65/212 (30%), Gaps = 16/212 (7%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNF--LARVDMGIDSDIPIISKE 73
              IL    +   K +        +      +    F         DM   S + I  ++
Sbjct: 53  ALTILSTAANASAKVLQKGSRGSQVTSLQKELAAAGFYKGRITGNYDMLTQSYVAIFQQK 112

Query: 74  ------TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP 126
                  +A  +   A Y+     G    LP    L  G+    V  L+++L   G    
Sbjct: 113 KGLPIDGVAGPKTLAALYKT---AGTDIRLPTNTQLKRGSRGTVVSDLQKKLTTLGFF-- 167

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           +  ++  +    ++AV  FQ   GL   G+   +TL  +N        QL+         
Sbjct: 168 NGPITGYYGRITQAAVIKFQQAKGLPVDGVAGPNTLFVINGGSIKNATQLRRGNRGTAVT 227

Query: 187 LEQKMGLRYVLVNIP--AASLEAVENGKVGLR 216
             Q+      + N P         E G V  +
Sbjct: 228 KLQQRMRELKVYNGPVTGFYGRLTEAGVVKFQ 259



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 16/148 (10%)

Query: 29  KPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
             +      E + +  + +    F       +  ++      D   +S+E  A     IA
Sbjct: 292 TELRPGSNGESVTKLQNRLAQLGFYKGPVTGYYGKLTETAVKDY-QLSRELPAN---GIA 347

Query: 84  FYQDILSRGGWPELPI-----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             + + +  G   + +      PL  G+    V  L+ RLI  G           F    
Sbjct: 348 DSRTLSALRGNSGIAVAAAIITPLKRGSRGTRVNSLQNRLIYLGYYK--GLKDGVFGPAT 405

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           E+A+K +Q   GL P+G+ D+ T  ++ 
Sbjct: 406 EAALKRYQQDKGLFPNGIADARTFSSLA 433



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++  SV +L+ RL   G       ++  +    E+AVK +Q+   L  +G+ DS T
Sbjct: 294 LRPGSNGESVTKLQNRLAQLGFYK--GPVTGYYGKLTETAVKDYQLSRELPANGIADSRT 351

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           L A+     + +            +   K G R   VN     L  
Sbjct: 352 LSALRGNSGIAVA--------AAIITPLKRGSRGTRVNSLQNRLIY 389



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 2/84 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  GN   +V +L++R+        +  ++  +    E+ V  FQ   GL  +G+ D
Sbjct: 214 ATQLRRGNRGTAVTKLQQRMRELKVY--NGPVTGFYGRLTEAGVVKFQRLRGLPVTGIAD 271

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMR 182
           S TL  +    + +     V  +R
Sbjct: 272 SRTLSDLAKNPNDKDNLTNVTELR 295


>gi|304316558|ref|YP_003851703.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778060|gb|ADL68619.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 386

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 57/219 (26%), Gaps = 81/219 (36%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VNIP+ ++  V      L   + VG++   +P+   RI     NP W+ P          
Sbjct: 32  VNIPSRTIYFVSQNISKL-YPIAVGKIVSTSPLGTYRIINKQINPTWISPW--------- 81

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                               G+ V                     G  N +    I FYS
Sbjct: 82  -------------------NGQVV-------------------PSGPNNPLGYRWIGFYS 103

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
                 H    P          +SGC+R+                     + E+V     
Sbjct: 104 DYGI--HGNNMPSSIGT---LASSGCIRMYEA--------------DVEELYEMVNYGDI 144

Query: 378 TPVKLATEVPVHFVYISAWSPKD---SIIQF-RDDIYGL 412
                     V+ VY + ++          F   D Y  
Sbjct: 145 ----------VNVVYQTMFTKTSPTGGKALFVYPDFYKK 173


>gi|227114591|ref|ZP_03828247.1| hypothetical protein PcarbP_16598 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 303

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     G        + +G+  R TP    + +      P W  P +   +
Sbjct: 98  IVINVAEMRLYYYPKGSNTVEVLPIGIGQAGRDTPTNWVTSVKYKKEGPTWT-PTAATHR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           D        P +                                     G  N M    I
Sbjct: 157 DYARRGESLPAFF----------------------------------PAGPENPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-----YHI 368
              +      H T     F   +R  + GCVR+RN  D+  +L ++ P  +R       I
Sbjct: 183 YIGNLYAI--HGTNA--NFGIGLR-ISQGCVRLRN-DDI-KYLFENVPNGTRVQFINEPI 235

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  ++   T  +++   +
Sbjct: 236 KVSLEPDGTHWIEVHEPL 253


>gi|228987342|ref|ZP_04147462.1| hypothetical protein bthur0001_40140 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229157731|ref|ZP_04285806.1| hypothetical protein bcere0010_39120 [Bacillus cereus ATCC 4342]
 gi|228625688|gb|EEK82440.1| hypothetical protein bcere0010_39120 [Bacillus cereus ATCC 4342]
 gi|228772314|gb|EEM20760.1| hypothetical protein bthur0001_40140 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|218688603|ref|YP_002396815.1| hypothetical protein ECED1_0784 [Escherichia coli ED1a]
 gi|218426167|emb|CAR06989.1| conserved hypothetical protein [Escherichia coli ED1a]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|261820249|ref|YP_003258355.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
 gi|261604262|gb|ACX86748.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium wasabiae WPP163]
          Length = 357

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 91  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 151 WTPTAKMHAE-----------------------------------YAARGETLKAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R   D+  +L  + P  
Sbjct: 176 PDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFNNVPVG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 229 TRVQFINEPVKATVEPDGSRYVEVHNPL 256


>gi|34497388|ref|NP_901603.1| hypothetical protein CV_1933 [Chromobacterium violaceum ATCC 12472]
 gi|34103244|gb|AAQ59607.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 301

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 39/169 (23%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           R++++N+P A L   ++GK+     V VG++  QTP     I  I   P W +P+SI ++
Sbjct: 35  RHLVLNLPQARLFLYQDGKLARIFPVAVGKMLTQTPTGSFDITGIYRAPSWHVPKSIQEE 94

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                               +   GKEV        +        R      +++     
Sbjct: 95  --------------------MRRSGKEVQTVVPPGPNNPLGPVFVRFG---ESSLGL--- 128

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                     H T  P    +V  F + GCVR+RN   ++L   + +  
Sbjct: 129 --------GFHGTNAP---GSVPGFRSHGCVRLRNDDALELARTVSRGD 166


>gi|322832676|ref|YP_004212703.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
 gi|321167877|gb|ADW73576.1| ErfK/YbiS/YcfS/YnhG family protein [Rahnella sp. Y9602]
          Length = 340

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 44/179 (24%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N     L     G    +   + +G + + TP+   + + R    P W  P +
Sbjct: 131 PHEGIVINSAEMRLYYYPKGTNTVVVLPIGIGELGKDTPMNWVTTVQRKKAGPTWT-PTA 189

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
            + ++          Y                                     G  N M 
Sbjct: 190 KMHEE----------YASRGEF------------------------LPAVFPAGPDNPMG 215

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              +          H T     F   +R  + GCVR+R+      WL  + P  +R   
Sbjct: 216 LYALYVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRDAD--IKWLFDNVPQGTRVQF 267


>gi|331700382|ref|YP_004336621.1| cell wall hydrolase/autolysin [Pseudonocardia dioxanivorans CB1190]
 gi|326955071|gb|AEA28768.1| cell wall hydrolase/autolysin [Pseudonocardia dioxanivorans CB1190]
          Length = 388

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-----LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  G+S  +V  +R  L   G        P       FD +VE AV+ FQ R GL   G+
Sbjct: 4   LRRGDSGPAVAEIRGMLARYGLPAGQQAPPGGPAEQLFDEHVEQAVRAFQQRRGLITDGV 63

Query: 157 VDSSTLEAMN 166
           V  +T  A+ 
Sbjct: 64  VGPATYRALR 73



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 22/96 (22%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGN-----------SSVSVQRLRERLIISGDLDPSKGLS 131
           A Y+ +   G W         LG+           S   V  L+ERL+  G         
Sbjct: 67  ATYRALREAG-W--------KLGDRMLALLISAPMSGDDVVTLQERLLELGY--DVGRPG 115

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             FD   E  +K FQ  +GL P G+    TL A+  
Sbjct: 116 GVFDDQTERGLKGFQRDYGLVPDGVCGPQTLRALRQ 151


>gi|296103243|ref|YP_003613389.1| hypothetical protein ECL_02904 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057702|gb|ADF62440.1| hypothetical protein ECL_02904 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 328

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TP+   +++ R    P W     +  +
Sbjct: 123 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPLNWTTKVERKKAGPTWTPTAKMHAE 182

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            + A                                             G  N M    +
Sbjct: 183 YIAA-----------------------------------GEPLPAVVPAGPDNPMGLYAL 207

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 208 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 255


>gi|324018500|gb|EGB87719.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 117-3]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|301051255|ref|ZP_07198083.1| ErfK/YbiS/YcfS/YnhG- like protein [Escherichia coli MS 185-1]
 gi|300297072|gb|EFJ53457.1| ErfK/YbiS/YcfS/YnhG- like protein [Escherichia coli MS 185-1]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|15800571|ref|NP_286583.1| hypothetical protein Z1041 [Escherichia coli O157:H7 EDL933]
 gi|15830150|ref|NP_308923.1| hypothetical protein ECs0896 [Escherichia coli O157:H7 str. Sakai]
 gi|16128787|ref|NP_415340.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|26246795|ref|NP_752835.1| hypothetical protein c0905 [Escherichia coli CFT073]
 gi|74311361|ref|YP_309780.1| hypothetical protein SSON_0798 [Shigella sonnei Ss046]
 gi|82543264|ref|YP_407211.1| hypothetical protein SBO_0709 [Shigella boydii Sb227]
 gi|82776103|ref|YP_402450.1| hypothetical protein SDY_0777 [Shigella dysenteriae Sd197]
 gi|89107670|ref|AP_001450.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|91209854|ref|YP_539840.1| hypothetical protein UTI89_C0823 [Escherichia coli UTI89]
 gi|110641023|ref|YP_668751.1| hypothetical protein ECP_0833 [Escherichia coli 536]
 gi|117622999|ref|YP_851912.1| hypothetical protein APECO1_1273 [Escherichia coli APEC O1]
 gi|157159386|ref|YP_001462014.1| hypothetical protein EcE24377A_0889 [Escherichia coli E24377A]
 gi|157160297|ref|YP_001457615.1| hypothetical protein EcHS_A0876 [Escherichia coli HS]
 gi|170020825|ref|YP_001725779.1| hypothetical protein EcolC_2824 [Escherichia coli ATCC 8739]
 gi|170080478|ref|YP_001729798.1| hypothetical protein ECDH10B_0888 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683699|ref|YP_001742923.1| hypothetical protein EcSMS35_0843 [Escherichia coli SMS-3-5]
 gi|187733569|ref|YP_001880993.1| hypothetical protein SbBS512_E2529 [Shigella boydii CDC 3083-94]
 gi|188493106|ref|ZP_03000376.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 53638]
 gi|193064484|ref|ZP_03045565.1| YbiS protein [Escherichia coli E22]
 gi|195936860|ref|ZP_03082242.1| hypothetical protein EscherichcoliO157_10410 [Escherichia coli
           O157:H7 str. EC4024]
 gi|209918067|ref|YP_002292151.1| hypothetical protein ECSE_0876 [Escherichia coli SE11]
 gi|215485906|ref|YP_002328337.1| hypothetical protein E2348C_0771 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218553404|ref|YP_002386317.1| hypothetical protein ECIAI1_0856 [Escherichia coli IAI1]
 gi|218557724|ref|YP_002390637.1| hypothetical protein ECS88_0837 [Escherichia coli S88]
 gi|218694292|ref|YP_002401959.1| hypothetical protein EC55989_0862 [Escherichia coli 55989]
 gi|218699192|ref|YP_002406821.1| hypothetical protein ECIAI39_0796 [Escherichia coli IAI39]
 gi|218704237|ref|YP_002411756.1| hypothetical protein ECUMN_1003 [Escherichia coli UMN026]
 gi|227884216|ref|ZP_04002021.1| YbiS protein [Escherichia coli 83972]
 gi|237707219|ref|ZP_04537700.1| ybiS [Escherichia sp. 3_2_53FAA]
 gi|238900078|ref|YP_002925874.1| hypothetical protein BWG_0672 [Escherichia coli BW2952]
 gi|253774178|ref|YP_003037009.1| hypothetical protein ECBD_2804 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160896|ref|YP_003044004.1| hypothetical protein ECB_00786 [Escherichia coli B str. REL606]
 gi|254792015|ref|YP_003076852.1| hypothetical protein ECSP_0917 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021110|ref|ZP_05434975.1| hypothetical protein ShiD9_19479 [Shigella sp. D9]
 gi|256023585|ref|ZP_05437450.1| hypothetical protein E4_09438 [Escherichia sp. 4_1_40B]
 gi|260843061|ref|YP_003220839.1| hypothetical protein ECO103_0854 [Escherichia coli O103:H2 str.
           12009]
 gi|260854110|ref|YP_003228001.1| hypothetical protein ECO26_0945 [Escherichia coli O26:H11 str.
           11368]
 gi|261225467|ref|ZP_05939748.1| hypothetical protein EscherichiacoliO157_12828 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258564|ref|ZP_05951097.1| hypothetical protein EscherichiacoliO157EcO_22481 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291281816|ref|YP_003498634.1| hypothetical protein G2583_1047 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404118|ref|ZP_06648112.1| ybiS protein [Escherichia coli FVEC1412]
 gi|293409195|ref|ZP_06652771.1| hypothetical protein ECEG_00125 [Escherichia coli B354]
 gi|293414096|ref|ZP_06656745.1| hypothetical protein ECDG_00647 [Escherichia coli B185]
 gi|293433117|ref|ZP_06661545.1| ybiS protein [Escherichia coli B088]
 gi|298379900|ref|ZP_06989505.1| ybiS protein [Escherichia coli FVEC1302]
 gi|300816467|ref|ZP_07096689.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 107-1]
 gi|300824280|ref|ZP_07104397.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 119-7]
 gi|300895727|ref|ZP_07114321.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 198-1]
 gi|300907149|ref|ZP_07124814.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 84-1]
 gi|300920072|ref|ZP_07136529.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 115-1]
 gi|300922844|ref|ZP_07138930.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 182-1]
 gi|300929376|ref|ZP_07144847.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 187-1]
 gi|300947095|ref|ZP_07161313.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 116-1]
 gi|300957020|ref|ZP_07169268.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 175-1]
 gi|300991887|ref|ZP_07179712.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 200-1]
 gi|300993382|ref|ZP_07180364.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 45-1]
 gi|301020680|ref|ZP_07184751.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 69-1]
 gi|301026990|ref|ZP_07190378.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 196-1]
 gi|301303577|ref|ZP_07209699.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 124-1]
 gi|301328013|ref|ZP_07221176.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 78-1]
 gi|301646252|ref|ZP_07246146.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 146-1]
 gi|306812778|ref|ZP_07446971.1| hypothetical protein ECNC101_12717 [Escherichia coli NC101]
 gi|307137444|ref|ZP_07496800.1| hypothetical protein EcolH7_04844 [Escherichia coli H736]
 gi|307313771|ref|ZP_07593388.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|309786514|ref|ZP_07681137.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|309798049|ref|ZP_07692425.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 145-7]
 gi|312969157|ref|ZP_07783364.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312970896|ref|ZP_07785075.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|331641336|ref|ZP_08342471.1| putative periplasmic protein [Escherichia coli H736]
 gi|331646039|ref|ZP_08347142.1| putative periplasmic protein [Escherichia coli M605]
 gi|331651829|ref|ZP_08352848.1| putative periplasmic protein [Escherichia coli M718]
 gi|331656841|ref|ZP_08357803.1| putative periplasmic protein [Escherichia coli TA206]
 gi|331662177|ref|ZP_08363100.1| putative periplasmic protein [Escherichia coli TA143]
 gi|331667189|ref|ZP_08368054.1| putative periplasmic protein [Escherichia coli TA271]
 gi|331676558|ref|ZP_08377254.1| putative periplasmic protein [Escherichia coli H591]
 gi|331682326|ref|ZP_08382945.1| putative periplasmic protein [Escherichia coli H299]
 gi|332282334|ref|ZP_08394747.1| ybiS [Shigella sp. D9]
 gi|77416786|sp|P0AAY0|YBIS_ECO57 RecName: Full=Probable L,D-transpeptidase YbiS; Flags: Precursor
 gi|77416787|sp|P0AAX9|YBIS_ECOL6 RecName: Full=Probable L,D-transpeptidase YbiS; Flags: Precursor
 gi|77416788|sp|P0AAX8|YBIS_ECOLI RecName: Full=Probable L,D-transpeptidase YbiS; Flags: Precursor
 gi|12513818|gb|AAG55191.1|AE005262_11 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26107194|gb|AAN79378.1|AE016757_282 Protein ybiS precursor [Escherichia coli CFT073]
 gi|1787040|gb|AAC73906.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|4062386|dbj|BAA35500.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|13360355|dbj|BAB34319.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|73854838|gb|AAZ87545.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81240251|gb|ABB60961.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|81244675|gb|ABB65383.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|91071428|gb|ABE06309.1| protein YbiS precursor [Escherichia coli UTI89]
 gi|110342615|gb|ABG68852.1| putative periplasmic protein [Escherichia coli 536]
 gi|115512123|gb|ABJ00198.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|157065977|gb|ABV05232.1| YbiS protein [Escherichia coli HS]
 gi|157081416|gb|ABV21124.1| YbiS protein [Escherichia coli E24377A]
 gi|169755753|gb|ACA78452.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
 gi|169888313|gb|ACB02020.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170521417|gb|ACB19595.1| YbiS protein [Escherichia coli SMS-3-5]
 gi|187430561|gb|ACD09835.1| YbiS protein [Shigella boydii CDC 3083-94]
 gi|188488305|gb|EDU63408.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 53638]
 gi|192928946|gb|EDV82559.1| YbiS protein [Escherichia coli E22]
 gi|209775718|gb|ACI86171.1| hypothetical protein ECs0896 [Escherichia coli]
 gi|209775720|gb|ACI86172.1| hypothetical protein ECs0896 [Escherichia coli]
 gi|209775722|gb|ACI86173.1| hypothetical protein ECs0896 [Escherichia coli]
 gi|209775724|gb|ACI86174.1| hypothetical protein ECs0896 [Escherichia coli]
 gi|209775726|gb|ACI86175.1| hypothetical protein ECs0896 [Escherichia coli]
 gi|209911326|dbj|BAG76400.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215263978|emb|CAS08319.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|218351024|emb|CAU96728.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218360172|emb|CAQ97721.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218364493|emb|CAR02175.1| conserved hypothetical protein [Escherichia coli S88]
 gi|218369178|emb|CAR16933.1| conserved hypothetical protein [Escherichia coli IAI39]
 gi|218431334|emb|CAR12212.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|226898429|gb|EEH84688.1| ybiS [Escherichia sp. 3_2_53FAA]
 gi|227838968|gb|EEJ49434.1| YbiS protein [Escherichia coli 83972]
 gi|238860289|gb|ACR62287.1| conserved protein [Escherichia coli BW2952]
 gi|242376611|emb|CAQ31320.1| L,D-transpeptidase YbiS [Escherichia coli BL21(DE3)]
 gi|253325222|gb|ACT29824.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972797|gb|ACT38468.1| hypothetical protein ECB_00786 [Escherichia coli B str. REL606]
 gi|253977017|gb|ACT42687.1| hypothetical protein ECD_00786 [Escherichia coli BL21(DE3)]
 gi|254591415|gb|ACT70776.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|257752759|dbj|BAI24261.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257758208|dbj|BAI29705.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|260450034|gb|ACX40456.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|281177954|dbj|BAI54284.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284920670|emb|CBG33733.1| putative exported protein [Escherichia coli 042]
 gi|290761689|gb|ADD55650.1| hypothetical protein G2583_1047 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323936|gb|EFE63358.1| ybiS protein [Escherichia coli B088]
 gi|291428704|gb|EFF01729.1| ybiS protein [Escherichia coli FVEC1412]
 gi|291434154|gb|EFF07127.1| hypothetical protein ECDG_00647 [Escherichia coli B185]
 gi|291469663|gb|EFF12147.1| hypothetical protein ECEG_00125 [Escherichia coli B354]
 gi|294490216|gb|ADE88972.1| YbiS protein [Escherichia coli IHE3034]
 gi|298279598|gb|EFI21106.1| ybiS protein [Escherichia coli FVEC1302]
 gi|299879483|gb|EFI87694.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 196-1]
 gi|300305497|gb|EFJ60017.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 200-1]
 gi|300316213|gb|EFJ65997.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 175-1]
 gi|300360339|gb|EFJ76209.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 198-1]
 gi|300398555|gb|EFJ82093.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 69-1]
 gi|300401116|gb|EFJ84654.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 84-1]
 gi|300406598|gb|EFJ90136.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 45-1]
 gi|300412891|gb|EFJ96201.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 115-1]
 gi|300420876|gb|EFK04187.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 182-1]
 gi|300453271|gb|EFK16891.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 116-1]
 gi|300462667|gb|EFK26160.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 187-1]
 gi|300523254|gb|EFK44323.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 119-7]
 gi|300531157|gb|EFK52219.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 107-1]
 gi|300841076|gb|EFK68836.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 124-1]
 gi|300845505|gb|EFK73265.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 78-1]
 gi|301075523|gb|EFK90329.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 146-1]
 gi|305853541|gb|EFM53980.1| hypothetical protein ECNC101_12717 [Escherichia coli NC101]
 gi|306906411|gb|EFN36925.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|307552663|gb|ADN45438.1| putative periplasmic protein [Escherichia coli ABU 83972]
 gi|307627771|gb|ADN72075.1| hypothetical protein UM146_13550 [Escherichia coli UM146]
 gi|308118379|gb|EFO55641.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 145-7]
 gi|308925577|gb|EFP71061.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|309701097|emb|CBJ00395.1| putative exported protein [Escherichia coli ETEC H10407]
 gi|310336657|gb|EFQ01824.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|312286559|gb|EFR14472.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|312945338|gb|ADR26165.1| hypothetical protein NRG857_03675 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315060055|gb|ADT74382.1| L,D-transpeptidase linking LPP to murein [Escherichia coli W]
 gi|315135469|dbj|BAJ42628.1| hypothetical protein ECDH1ME8569_0772 [Escherichia coli DH1]
 gi|315257808|gb|EFU37776.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 85-1]
 gi|315287261|gb|EFU46673.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 110-3]
 gi|315292555|gb|EFU51907.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 153-1]
 gi|315299355|gb|EFU58607.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 16-3]
 gi|315619823|gb|EFV00342.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|320637682|gb|EFX07474.1| L,D-transpeptidase [Escherichia coli O157:H7 str. G5101]
 gi|320642807|gb|EFX12008.1| L,D-transpeptidase [Escherichia coli O157:H- str. 493-89]
 gi|320648264|gb|EFX16919.1| L,D-transpeptidase [Escherichia coli O157:H- str. H 2687]
 gi|320654101|gb|EFX22169.1| L,D-transpeptidase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320659724|gb|EFX27280.1| L,D-transpeptidase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664195|gb|EFX31346.1| L,D-transpeptidase [Escherichia coli O157:H7 str. LSU-61]
 gi|323155813|gb|EFZ41982.1| hypothetical protein ECEPECA14_2372 [Escherichia coli EPECa14]
 gi|323159638|gb|EFZ45617.1| hypothetical protein ECE128010_4056 [Escherichia coli E128010]
 gi|323165741|gb|EFZ51527.1| hypothetical protein SS53G_3947 [Shigella sonnei 53G]
 gi|323185025|gb|EFZ70391.1| hypothetical protein ECOK1357_1481 [Escherichia coli 1357]
 gi|323190989|gb|EFZ76256.1| hypothetical protein ECRN5871_0837 [Escherichia coli RN587/1]
 gi|323379386|gb|ADX51654.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
 gi|323938173|gb|EGB34433.1| ykud domain-containing protein [Escherichia coli E1520]
 gi|323942691|gb|EGB38856.1| ykud domain-containing protein [Escherichia coli E482]
 gi|323947096|gb|EGB43108.1| ykud domain-containing protein [Escherichia coli H120]
 gi|323953519|gb|EGB49385.1| ykud domain-containing protein [Escherichia coli H252]
 gi|323958108|gb|EGB53817.1| ykud domain-containing protein [Escherichia coli H263]
 gi|323963065|gb|EGB58636.1| ykud domain-containing protein [Escherichia coli H489]
 gi|323969542|gb|EGB64831.1| ykud domain-containing protein [Escherichia coli TA007]
 gi|324009747|gb|EGB78966.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 57-2]
 gi|324013042|gb|EGB82261.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 60-1]
 gi|324116242|gb|EGC10164.1| ykud domain-containing protein [Escherichia coli E1167]
 gi|331038134|gb|EGI10354.1| putative periplasmic protein [Escherichia coli H736]
 gi|331044791|gb|EGI16918.1| putative periplasmic protein [Escherichia coli M605]
 gi|331050107|gb|EGI22165.1| putative periplasmic protein [Escherichia coli M718]
 gi|331055089|gb|EGI27098.1| putative periplasmic protein [Escherichia coli TA206]
 gi|331060599|gb|EGI32563.1| putative periplasmic protein [Escherichia coli TA143]
 gi|331065545|gb|EGI37438.1| putative periplasmic protein [Escherichia coli TA271]
 gi|331075247|gb|EGI46545.1| putative periplasmic protein [Escherichia coli H591]
 gi|331079957|gb|EGI51136.1| putative periplasmic protein [Escherichia coli H299]
 gi|332104686|gb|EGJ08032.1| ybiS [Shigella sp. D9]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|222032549|emb|CAP75288.1| Uncharacterized protein ybiS [Escherichia coli LF82]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|39995294|ref|NP_951245.1| putative lipoprotein [Geobacter sulfurreducens PCA]
 gi|39982056|gb|AAR33518.1| lipoprotein, putative [Geobacter sulfurreducens PCA]
 gi|298504297|gb|ADI83020.1| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, SPOR
           domain-containing [Geobacter sulfurreducens KN400]
          Length = 435

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 66/218 (30%), Gaps = 44/218 (20%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL- 215
           V  + + A N  VD+ + +    +      +      + +++N+    L   +     L 
Sbjct: 83  VGINAISAANPGVDVWLPKAGQRITLPLNFILPDAPRKGIVINLATMRLFQFKENGGALA 142

Query: 216 --RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V +G  +R TP   +R+ R    P W +P SI +                     
Sbjct: 143 VSTYPVGIGTKERPTPQGPTRVARKASRPTWYVPASIAED-------------------- 182

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                          +  +      R  PG  N +    +         +H T +P    
Sbjct: 183 ---------------HRKKGDILPARVPPGPENPLGDYALYLSRS-GYLIHGTNKPASIG 226

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
                 ++GC+R+     +   L +DT   +   I   
Sbjct: 227 ---LKASNGCMRLY-PEHI-EVLFRDTAVNTPVLIVNQ 259


>gi|85059020|ref|YP_454722.1| hypothetical protein SG1042 [Sodalis glossinidius str. 'morsitans']
 gi|84779540|dbj|BAE74317.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 375

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 60/210 (28%), Gaps = 49/210 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TP    + + R    P 
Sbjct: 91  LILPDTPHEGIVINSAEMRLYYYPKGTKTVIVLPIGIGELGKDTPSNWVTSVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W   ++I  +                                    +            G
Sbjct: 151 WTPTKAIHAE-----------------------------------YAERGETLPEVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  +L    P  
Sbjct: 176 PDNPMGLYALYVGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFDHVPVG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEVPV 388
           +R       ++  ++   +  +++   + V
Sbjct: 229 TRVQFINEPVKATIEPDGSRYLEVHNPLSV 258


>gi|300939857|ref|ZP_07154493.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 21-1]
 gi|300455291|gb|EFK18784.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 21-1]
 gi|323967420|gb|EGB62841.1| ykud domain-containing protein [Escherichia coli M863]
 gi|323976796|gb|EGB71884.1| ykud domain-containing protein [Escherichia coli TW10509]
 gi|327253606|gb|EGE65235.1| hypothetical protein ECSTEC7V_1030 [Escherichia coli STEC_7v]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGSNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|160935923|ref|ZP_02083297.1| hypothetical protein CLOBOL_00816 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441165|gb|EDP18882.1| hypothetical protein CLOBOL_00816 [Clostridium bolteae ATCC
           BAA-613]
          Length = 533

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     ++RL++RL+  G +D  +     F    + AVK FQ ++ L   G+V + T
Sbjct: 81  LRIGVRHEIIKRLQQRLMDLGFMDNDEPTD-YFGEMTQQAVKHFQRQNELPTDGIVGNVT 139

Query: 162 LEAMNVPVDL 171
            +A+  P   
Sbjct: 140 WDAIMSPDAK 149



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 9/143 (6%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
              + +   V  EII      +++  F       D   D    +  +       +     
Sbjct: 76  PAPEYLRIGVRHEIIKRLQQRLMDLGF----MDNDEPTDYFGEMTQQAVKHFQRQNELPT 131

Query: 86  QDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             I+    W  +         +  G     ++R+++RL   G L  +  ++  F    E+
Sbjct: 132 DGIVGNVTWDAIMSPDAKYYAVSKGTQGDDIERIQQRLYELGYLATADLVTGNFGDSTEA 191

Query: 141 AVKLFQMRHGLDPSGMVDSSTLE 163
           AV   Q  +GL+  G V   T+ 
Sbjct: 192 AVLKLQEVNGLEQDGKVGQRTIN 214



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   +ERL   G L  +     A+      AVK FQ R+     G +  ST
Sbjct: 226 LSYGEKSDVVLACQERLKELGYL--TTTPDGAYGEDTVVAVKQFQARNDQVVDGYLGPST 283

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLE----QKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             A+N   D R   L +   R   + +           V  N+     EA EN     +S
Sbjct: 284 RIALN-SPDARANGLMLG-ERGDAVTKVQQLLNKHGYLVSGNVTGYYGEATENAVRNFQS 341

Query: 218 T 218
            
Sbjct: 342 R 342



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 11/160 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIPIISKET 74
           L     +    +      +++      +    +     D       +         + + 
Sbjct: 215 LLYSDEIKPNFLSYGEKSDVVLACQERLKELGYLTTTPDGAYGEDTVVAVKQFQARNDQV 274

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +      +     I      P+     L LG    +V ++++ L   G L  S  ++  +
Sbjct: 275 VDG---YLGPSTRIALNS--PDARANGLMLGERGDAVTKVQQLLNKHGYL-VSGNVTGYY 328

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
               E+AV+ FQ R+GL   G+V   T+  +      R  
Sbjct: 329 GEATENAVRNFQSRNGLTSDGLVGVQTMAKLTGDNVRRPA 368


>gi|260866985|ref|YP_003233387.1| hypothetical protein ECO111_0879 [Escherichia coli O111:H- str.
           11128]
 gi|257763341|dbj|BAI34836.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|323175561|gb|EFZ61156.1| hypothetical protein ECOK1180_5846 [Escherichia coli 1180]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|187776237|ref|ZP_02801365.2| YbiS protein [Escherichia coli O157:H7 str. EC4196]
 gi|188024951|ref|ZP_02775023.2| YbiS protein [Escherichia coli O157:H7 str. EC4113]
 gi|189010026|ref|ZP_02804376.2| YbiS protein [Escherichia coli O157:H7 str. EC4076]
 gi|189402321|ref|ZP_02781618.2| YbiS protein [Escherichia coli O157:H7 str. EC4401]
 gi|189402920|ref|ZP_02792334.2| YbiS protein [Escherichia coli O157:H7 str. EC4486]
 gi|189404285|ref|ZP_02788340.2| YbiS protein [Escherichia coli O157:H7 str. EC4501]
 gi|189404905|ref|ZP_02812045.2| YbiS protein [Escherichia coli O157:H7 str. EC869]
 gi|189405886|ref|ZP_02824908.2| YbiS protein [Escherichia coli O157:H7 str. EC508]
 gi|191166143|ref|ZP_03027977.1| YbiS protein [Escherichia coli B7A]
 gi|191173759|ref|ZP_03035282.1| YbiS protein [Escherichia coli F11]
 gi|193069322|ref|ZP_03050277.1| YbiS protein [Escherichia coli E110019]
 gi|194428213|ref|ZP_03060756.1| YbiS protein [Escherichia coli B171]
 gi|194433126|ref|ZP_03065408.1| YbiS protein [Shigella dysenteriae 1012]
 gi|208808882|ref|ZP_03251219.1| YbiS protein [Escherichia coli O157:H7 str. EC4206]
 gi|208816380|ref|ZP_03257559.1| YbiS protein [Escherichia coli O157:H7 str. EC4045]
 gi|208822794|ref|ZP_03263113.1| YbiS protein [Escherichia coli O157:H7 str. EC4042]
 gi|209397897|ref|YP_002269488.1| YbiS protein [Escherichia coli O157:H7 str. EC4115]
 gi|217325389|ref|ZP_03441473.1| YbiS protein [Escherichia coli O157:H7 str. TW14588]
 gi|187768201|gb|EDU32045.1| YbiS protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015726|gb|EDU53848.1| YbiS protein [Escherichia coli O157:H7 str. EC4113]
 gi|189002893|gb|EDU71879.1| YbiS protein [Escherichia coli O157:H7 str. EC4076]
 gi|189356224|gb|EDU74643.1| YbiS protein [Escherichia coli O157:H7 str. EC4401]
 gi|189363361|gb|EDU81780.1| YbiS protein [Escherichia coli O157:H7 str. EC4486]
 gi|189366517|gb|EDU84933.1| YbiS protein [Escherichia coli O157:H7 str. EC4501]
 gi|189373062|gb|EDU91478.1| YbiS protein [Escherichia coli O157:H7 str. EC869]
 gi|189377791|gb|EDU96207.1| YbiS protein [Escherichia coli O157:H7 str. EC508]
 gi|190903752|gb|EDV63467.1| YbiS protein [Escherichia coli B7A]
 gi|190906009|gb|EDV65625.1| YbiS protein [Escherichia coli F11]
 gi|192957275|gb|EDV87723.1| YbiS protein [Escherichia coli E110019]
 gi|194413773|gb|EDX30052.1| YbiS protein [Escherichia coli B171]
 gi|194418623|gb|EDX34710.1| YbiS protein [Shigella dysenteriae 1012]
 gi|208728683|gb|EDZ78284.1| YbiS protein [Escherichia coli O157:H7 str. EC4206]
 gi|208733028|gb|EDZ81716.1| YbiS protein [Escherichia coli O157:H7 str. EC4045]
 gi|208738279|gb|EDZ85962.1| YbiS protein [Escherichia coli O157:H7 str. EC4042]
 gi|209159297|gb|ACI36730.1| YbiS protein [Escherichia coli O157:H7 str. EC4115]
 gi|217321610|gb|EEC30034.1| YbiS protein [Escherichia coli O157:H7 str. TW14588]
 gi|320177309|gb|EFW52313.1| L,D-transpeptidase YbiS [Shigella dysenteriae CDC 74-1112]
 gi|320183313|gb|EFW58168.1| L,D-transpeptidase YbiS [Shigella flexneri CDC 796-83]
 gi|320192704|gb|EFW67345.1| L,D-transpeptidase YbiS [Escherichia coli O157:H7 str. EC1212]
 gi|320196685|gb|EFW71308.1| L,D-transpeptidase YbiS [Escherichia coli WV_060327]
 gi|320199008|gb|EFW73605.1| L,D-transpeptidase YbiS [Escherichia coli EC4100B]
 gi|326338293|gb|EGD62122.1| L,D-transpeptidase YbiS [Escherichia coli O157:H7 str. 1125]
 gi|326346271|gb|EGD70009.1| L,D-transpeptidase YbiS [Escherichia coli O157:H7 str. 1044]
 gi|330910564|gb|EGH39074.1| l,D-transpeptidase YbiS [Escherichia coli AA86]
 gi|332088926|gb|EGI94038.1| hypothetical protein SB521682_2510 [Shigella boydii 5216-82]
 gi|332091082|gb|EGI96172.1| hypothetical protein SD15574_2484 [Shigella dysenteriae 155-74]
 gi|332097449|gb|EGJ02429.1| hypothetical protein SB359474_0835 [Shigella boydii 3594-74]
 gi|332342151|gb|AEE55485.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 304

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 99  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 159 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 231


>gi|148359132|ref|YP_001250339.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby]
 gi|296107181|ref|YP_003618881.1| hypothetical protein lpa_02313 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280905|gb|ABQ54993.1| hypothetical protein LPC_1022 [Legionella pneumophila str. Corby]
 gi|295649082|gb|ADG24929.1| Hypothetical protein lpa_02313 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 244

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 48/175 (27%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + +++N+    L     +  V +   V +G+   +TP+  SRI     NP W    
Sbjct: 93  NVPRKGIVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRITSKEINPTWRPTV 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                  +    +                                        PG  N +
Sbjct: 153 K------LQKAAESIGA-----------------------------PIPSEFPPGPYNPL 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H +             ++GC+R+   +I  L   +   TP
Sbjct: 178 GQHVLRLGWP-AILIHGSNRVDGIGAK---VSAGCIRMLPEDIEHLYSLVSVGTP 228


>gi|206976246|ref|ZP_03237154.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217961641|ref|YP_002340211.1| hypothetical protein BCAH187_A4281 [Bacillus cereus AH187]
 gi|222097598|ref|YP_002531655.1| protein erfk/srfk precursor [Bacillus cereus Q1]
 gi|229140884|ref|ZP_04269429.1| hypothetical protein bcere0013_39780 [Bacillus cereus BDRD-ST26]
 gi|229198279|ref|ZP_04324986.1| hypothetical protein bcere0001_38090 [Bacillus cereus m1293]
 gi|206745442|gb|EDZ56841.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217067758|gb|ACJ82008.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|221241656|gb|ACM14366.1| Protein erfK/srfK precursor [Bacillus cereus Q1]
 gi|228585158|gb|EEK43269.1| hypothetical protein bcere0001_38090 [Bacillus cereus m1293]
 gi|228642674|gb|EEK98960.1| hypothetical protein bcere0013_39780 [Bacillus cereus BDRD-ST26]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|307610295|emb|CBW99859.1| hypothetical protein LPW_16201 [Legionella pneumophila 130b]
          Length = 241

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP W    
Sbjct: 93  NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINPTWRPTV 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                  +    +                                        PG  N +
Sbjct: 153 K------LQKAAESIGA-----------------------------PIPSEFPPGPHNPL 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H +             ++GC+R+   +I  L   +   TP
Sbjct: 178 GQHVLRLGWP-AILIHGSNRVDGIGAK---VSAGCIRMLPEDIEHLYSLVSVGTP 228


>gi|53802376|ref|YP_112943.1| LysM domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53756137|gb|AAU90428.1| LysM domain protein [Methylococcus capsulatus str. Bath]
          Length = 434

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 48/180 (26%), Gaps = 43/180 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   + +++N+    L          V     V +G+  R TP  +  + R    P
Sbjct: 97  FTLPDAPRKGMVINLATMRLYHFPAKAAEGVISTYPVGIGKEGRSTPTGYMTVVRKTEFP 156

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W    +I +                                    ++ +         P
Sbjct: 157 TWYPTENIRRD-----------------------------------HALKGDPLPPAVSP 181

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           G  N +    +         +H T +P       R  ++GC+R+    D+     +  P 
Sbjct: 182 GPDNPLGDYAMYLSRPQ-YLIHGTNKPYSIG--FRA-SNGCIRLY-PEDIAAVFPEVKPG 236


>gi|323172264|gb|EFZ57902.1| hypothetical protein ECLT68_3301 [Escherichia coli LT-68]
          Length = 302

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 97  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 157 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 181

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 182 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 229


>gi|146310968|ref|YP_001176042.1| hypothetical protein Ent638_1310 [Enterobacter sp. 638]
 gi|145317844|gb|ABP59991.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter sp. 638]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 58/238 (24%)

Query: 135 DAYVESAVKLFQM--RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           D  +E     +Q+   + L+ +  VD    +A  V          +N+ +   L +    
Sbjct: 50  DQPLEYFAAEYQLGLSNMLEANPGVDPYLPKAGTV----------LNIPQQLILPDTVHE 99

Query: 193 LRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSI 250
              +++N     L     G    +   + +G++ + TP+   +++ R    P W     +
Sbjct: 100 G--IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPMNWTTKVERKKAGPTWTPTAKM 157

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
             + + A                                             G  N M  
Sbjct: 158 HAEYIAA-----------------------------------GEPLPAVVPAGPDNPMGL 182

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +          H T     F   +R  + GCVR+RN      +L ++ P  +R   
Sbjct: 183 YALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFENVPVGTRVQF 233


>gi|170768987|ref|ZP_02903440.1| YbiS protein [Escherichia albertii TW07627]
 gi|170122059|gb|EDS90990.1| YbiS protein [Escherichia albertii TW07627]
          Length = 306

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TP+   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPVNWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 233


>gi|259909024|ref|YP_002649380.1| hypothetical protein YbiS [Erwinia pyrifoliae Ep1/96]
 gi|224964646|emb|CAX56160.1| conserved uncharacterized protein YbiS [Erwinia pyrifoliae Ep1/96]
 gi|283479040|emb|CAY74956.1| Protein erfK/srfK precursor [Erwinia pyrifoliae DSM 12163]
          Length = 362

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + ++                                   +    +       G
Sbjct: 151 WT-PTKKMHEE----------------------------------YAARGESLPEVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-AEDI-KWLFSNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|170731554|ref|YP_001763501.1| peptidoglycan binding domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169814796|gb|ACA89379.1| Peptidoglycan-binding domain 1 protein [Burkholderia cenocepacia
           MC0-3]
          Length = 266

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 3/114 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +L+ +G           + +   SAV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVSYLQRQLVAAG---ARLDTDAIYGSATRSAVMAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            T   ++            +L R    L+  +     +  + +     + +G+ 
Sbjct: 60  KTWSTLSAGRRDPRHLTDADLQRAADRLQVDLAAVRAVNEVESRGAGFLPDGRP 113


>gi|310767078|gb|ADP12028.1| conserved uncharacterized protein YbiS [Erwinia sp. Ejp617]
          Length = 362

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + ++                                   +    +       G
Sbjct: 151 WT-PTKKMHEE----------------------------------YAARGESLPEVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-AEDI-KWLFSNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|292487711|ref|YP_003530584.1| protein ErfK/srfK [Erwinia amylovora CFBP1430]
 gi|292898946|ref|YP_003538315.1| exported protein [Erwinia amylovora ATCC 49946]
 gi|291198794|emb|CBJ45903.1| putative exported protein [Erwinia amylovora ATCC 49946]
 gi|291553131|emb|CBA20176.1| Protein erfK/srfK precursor [Erwinia amylovora CFBP1430]
 gi|312171824|emb|CBX80081.1| Protein erfK/srfK precursor [Erwinia amylovora ATCC BAA-2158]
          Length = 366

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 53/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G K  +   V +G + + TPI   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGSKTVVVLPVGIGELGKDTPINWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + ++                                   +    +       G
Sbjct: 151 WT-PTKKMHEE----------------------------------YAARGESLPEVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-AEDI-KWLFSNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|196038830|ref|ZP_03106138.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196030553|gb|EDX69152.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|160880026|ref|YP_001558994.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428692|gb|ABX42255.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 635

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 21/256 (8%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
              K     V    + E    +++  F           D    I ++       ++    
Sbjct: 170 PAPKFYDIGVRHSTVMEIQQRLMDLGF----MEDAEPTDYYGSITAEAVKMFQRQSDLKQ 225

Query: 86  QDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             IL    +  L           LG     ++R+++RL   G L  +  ++  F    ES
Sbjct: 226 DGILGPDTFEMLLSDNAKHYAAKLGMDGADIKRIQQRLYEMGYLATADMVTGHFGDVTES 285

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK  Q  +GL   G V   T++ +    + +   +         L  QK          
Sbjct: 286 AVKKMQENNGLGVDGKVGKMTVD-LLYSEEAKPNLIAYGEQSDIVLAAQKR-------LK 337

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI----NRIMFNPYWVIPRSIIQKDMM 256
               L    +GK G  ++V V +   +  ++         R +      +P  ++  D  
Sbjct: 338 ELGYLTTTPDGKYGNDTSVAVKQFQSRNDLVVDGFLGPSTREVLKSSSAVPNGVMLGDSG 397

Query: 257 ALLRQDPQYLKDNNIH 272
             +++  + L      
Sbjct: 398 DAVKRIQELLNKYGYL 413



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P   + LG+S  +V+R++E L   G L  S  ++  F    E AVK FQ  +GL   G
Sbjct: 386 AVPNGVM-LGDSGDAVKRIQELLNKYGYLS-SANMTGYFGEVTEDAVKSFQKNNGLSADG 443

Query: 156 MVDSSTLEAMNVP 168
            V   T+  +   
Sbjct: 444 NVGVMTMTKLTSS 456


>gi|266620407|ref|ZP_06113342.1| endopeptidase, cell wall lytic activity [Clostridium hathewayi DSM
           13479]
 gi|288867984|gb|EFD00283.1| endopeptidase, cell wall lytic activity [Clostridium hathewayi DSM
           13479]
          Length = 513

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L++RL+  G +D  +     F    ESAVK FQ ++ L   G+V   T
Sbjct: 87  LRNGVEHPIVASLQQRLMDLGFMDNDEPT-QYFGTMTESAVKTFQRQNHLAQDGIVGPET 145

Query: 162 LEAMNVPVDL 171
           L A+  P   
Sbjct: 146 LNAIMTPSAK 155



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V   + RL   G L  +     A+     +AVK FQ R+ L   G +  ST
Sbjct: 232 LSYGEKSDVVLACQTRLKELGYL--TTTPDGAYGDDTAAAVKQFQARNDLVVDGYLGPST 289

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAASLEAVENGKVGLRST 218
             A+N   + +   L +          Q++  +Y      N+     E  E      +S+
Sbjct: 290 RVALN-SAEAQANGLMLGEQGETVTRIQQLLNKYGYLSSANVTGYYGEVTEKAVKSFQSS 348

Query: 219 VIV---GRVDRQT 228
             +   G V RQT
Sbjct: 349 NGLTADGSVGRQT 361



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 48/164 (29%), Gaps = 21/164 (12%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIPIISKET 74
           L     +    +      +++      +    +     D                 +   
Sbjct: 221 LLYSDEIKPNFLSYGEKSDVVLACQTRLKELGYLTTTPDGAYGDDTAAAVKQFQARNDLV 280

Query: 75  IA-----QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +       T  A+   +   + G         L LG    +V R+++ L   G L  S  
Sbjct: 281 VDGYLGPSTRVALNSAEA-QANG---------LMLGEQGETVTRIQQLLNKYGYLS-SAN 329

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++  +    E AVK FQ  +GL   G V   T+  +      + 
Sbjct: 330 VTGYYGEVTEKAVKSFQSSNGLTADGSVGRQTMNKLTGSNVKKA 373



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 46/154 (29%), Gaps = 29/154 (18%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIP---------I 69
           + V + +   V   I+      +++  F        +   +                  I
Sbjct: 81  NPVPEYLRNGVEHPIVASLQQRLMDLGFMDNDEPTQYFGTMTESAVKTFQRQNHLAQDGI 140

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +  ET+       A Y  +                      ++R++ RL   G L     
Sbjct: 141 VGPETLNAIMTPSAKYYAVSKD--------------VDGDDIKRIQNRLYELGYLATGDL 186

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           ++  F    E+AV   Q  +GL+  G V   T+ 
Sbjct: 187 VTGHFGDDTEAAVIKLQEVNGLNVDGKVGRQTIN 220


>gi|308535396|ref|YP_002140776.2| peptidoglycan L,D-transpeptidase lipoprotein [Geobacter
           bemidjiensis Bem]
 gi|308052741|gb|ACH40980.2| peptidoglycan L,D-transpeptidase lipoprotein, YkuD family, SPOR
           domain-containing protein [Geobacter bemidjiensis Bem]
          Length = 440

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 69/210 (32%), Gaps = 44/210 (20%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL-EAVENGK--V 213
           +  + + A N  VD+ + +    ++     +      + +++N+    L    E+GK  V
Sbjct: 87  LGINAISAANPGVDVWVPEPGKEVILPLSFILPDAPRKGIVINLATMRLFRFKEDGKAQV 146

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V VG  +R TP    RI R    P W +P SI +                     
Sbjct: 147 VSTYPVGVGTAERPTPTGKMRIERKTALPTWHVPASIAED-------------------- 186

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
                          +  +      +  PG  N +    +    +    +H T +P    
Sbjct: 187 ---------------HRKKGDLLPAKVPPGPENPLGERALYLS-KAGYLIHGTNKPASIG 230

Query: 334 NVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                 T+GC+R+   N+  L      +TP
Sbjct: 231 ---LKATNGCLRLYPENVTTLYEETPVNTP 257


>gi|71282503|ref|YP_270846.1| LysM domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71148243|gb|AAZ28716.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Colwellia
           psychrerythraea 34H]
          Length = 303

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 41/182 (22%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           +  + +++N+P   L      +  +    V +GR    TP+  + I     +P W  P  
Sbjct: 96  ISRKGIVINLPELRLYYYSPEENKVHVFPVGIGRQGLSTPLTSTVIGEKRKDPDWR-PTK 154

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
            +QK       +  +YL                                    G  N   
Sbjct: 155 EMQKR---HFAEHGEYL------------------------------PDVVPAGPNNPFG 181

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
              +   +     +H + +   F   +R  +SGC+R+ +  D+  WL  + P  ++  + 
Sbjct: 182 KYALRLGTSE-YLIHGSNKR--FGIGMRA-SSGCIRMYD-DDI-KWLFDNVPVNTKVRVV 235

Query: 370 EV 371
             
Sbjct: 236 NQ 237


>gi|300715947|ref|YP_003740750.1| conserved uncharacterized protein YbiS [Erwinia billingiae Eb661]
 gi|299061783|emb|CAX58899.1| Putative conserved uncharacterized protein YbiS [Erwinia billingiae
           Eb661]
          Length = 433

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 62/226 (27%), Gaps = 62/226 (27%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   V VG + + TPI   + + R    P 
Sbjct: 91  LILPDAPREGIVINSAEMRLYYYPKGTKTVVVLPVGVGELGKDTPINWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   + +D +                                              G
Sbjct: 151 WT-PTKKMHEDSV----------------------------------AAGSPLPTIFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLFDNVPVG 228

Query: 364 SR-YHIEEVVK-----------------TRKTTPVKLATEVPVHFV 391
           +R   I++ +K                 ++          VP+   
Sbjct: 229 TRVQFIDQPIKATVEPDGSRLVEVHNPLSQTEEQFNSREPVPLSIT 274


>gi|282860963|ref|ZP_06270029.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282564699|gb|EFB70235.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 311

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+SS  V+ L+ RL   G  D S      +    E++V+ FQ + GL  +G  D+ T
Sbjct: 106 MKTGDSSDRVRELQARLRQIGHFDRSPT--GYYGTTTEASVRSFQGKRGLPRTGRTDTVT 163

Query: 162 LEA-MNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            +  +++  +    +L+    R     + + M  R + ++  + +L  + +GKV     V
Sbjct: 164 WQRLLDMTREPTADELRPPTERAVAKPDPRCMTGRVLCISKNSRTLAWMIDGKVVSSMDV 223

Query: 220 IVGRVDRQTPILHSRINRI 238
             G     T      +   
Sbjct: 224 RFGSEYTPTREGVFEVYWK 242


>gi|288942661|ref|YP_003444901.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288898033|gb|ADC63869.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 321

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 43/159 (27%), Gaps = 41/159 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVG--LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  + ++VN     L               + VG+    TP+ +  +     +P W   
Sbjct: 102 NVPHQGIVVNRAEKRLYYYPPNSPNEVRIYAITVGKDAMATPLGNFDVIEKRKDPTWTP- 160

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                      +R +                          ++ +         PG  N 
Sbjct: 161 --------GPQVRAN--------------------------HAAKGHILPPTVPPGPDNP 186

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           +    +   + +   +H T +P          + GC+R+
Sbjct: 187 LGRFAMRLSNPD-YLIHGTNQPWGMGLE---VSGGCIRM 221


>gi|228909986|ref|ZP_04073806.1| hypothetical protein bthur0013_41350 [Bacillus thuringiensis IBL
           200]
 gi|228849503|gb|EEM94337.1| hypothetical protein bthur0013_41350 [Bacillus thuringiensis IBL
           200]
          Length = 186

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|254507501|ref|ZP_05119635.1| general secretion pathway protein A [Vibrio parahaemolyticus 16]
 gi|219549571|gb|EED26562.1| general secretion pathway protein A [Vibrio parahaemolyticus 16]
          Length = 490

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ I     W +     L  G     V  L   L +   L   +  S  +D+ ++  VKL
Sbjct: 399 YRQI-----WRKYWGGSLKPGMQGEPVALLDRHLSML--LGKPRTGSDRYDSALQEKVKL 451

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           FQ   GL   G+   +TL+ +   V   +  L  N  
Sbjct: 452 FQRWQGLSVDGIAGKNTLQRLEEMVREGVPSLTDNEE 488


>gi|323227282|gb|EGA11450.1| hypothetical protein SEEM0055_00971 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
          Length = 245

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 40  IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 99

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 100 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 124

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 125 YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 172


>gi|125974461|ref|YP_001038371.1| peptidoglycan binding domain-containing protein [Clostridium
           thermocellum ATCC 27405]
 gi|256005183|ref|ZP_05430151.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 2360]
 gi|281418988|ref|ZP_06250006.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           JW20]
 gi|125714686|gb|ABN53178.1| Peptidoglycan-binding domain 1 [Clostridium thermocellum ATCC
           27405]
 gi|255990837|gb|EEU00951.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 2360]
 gi|281407445|gb|EFB37705.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           JW20]
 gi|316941598|gb|ADU75632.1| Peptidoglycan-binding domain 1 protein [Clostridium thermocellum
           DSM 1313]
          Length = 360

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 18/153 (11%)

Query: 27  VEKPIHASVLDEIINESYH-----SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA 81
               +   +    +            ++     +   +       +    +      E  
Sbjct: 30  SSGILKEGMSGSQVTSLQRDLNTLGYLDVTPTGYYGSLTTAAVKKL----QRNYGLKEDG 85

Query: 82  IAF-------YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           IA         + I  R          L  G S  SV  L++ L   G L         +
Sbjct: 86  IAGPDTLSLIKRLINERTASRSSGGTTLKEGMSGSSVTALQKDLKALGYLSVDPT--GYY 143

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +  + AVK  Q +HGL+  G+    TL  ++ 
Sbjct: 144 GSLTKEAVKKLQAKHGLEQDGIAGPKTLALIDR 176



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G S   V  L+  L   G LD +      + +   +AVK  Q  +GL   G+ 
Sbjct: 30  SSGILKEGMSGSQVTSLQRDLNTLGYLDVTPT--GYYGSLTTAAVKKLQRNYGLKEDGIA 87

Query: 158 DSSTLEAMNVPVDLRIRQ 175
              TL  +   ++ R   
Sbjct: 88  GPDTLSLIKRLINERTAS 105


>gi|320177848|gb|EFW52834.1| L,D-transpeptidase YbiS [Shigella boydii ATCC 9905]
          Length = 304

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 47/175 (26%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 99  IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 159 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 231


>gi|300813344|ref|ZP_07093695.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str.
            F0141]
 gi|300512487|gb|EFK39636.1| excinuclease ABC, A subunit [Peptoniphilus sp. oral taxon 836 str.
            F0141]
          Length = 1208

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 61/231 (26%), Gaps = 65/231 (28%)

Query: 142  VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL--RYVLVN 199
            +K FQ    +  SG +D+ T EA+             N       +         ++ VN
Sbjct: 985  IKKFQATMNIPISGTLDNKTKEAL------------YNKDYKVWDMVTNPPSKGYWIAVN 1032

Query: 200  IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
                 L      K   +  V +G    QTP    +I  +  NP W               
Sbjct: 1033 KSRRILTMYMGDKSLGKYPVTLGTSATQTPSGRGKIGNMHKNPAW--------------- 1077

Query: 260  RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR- 318
                       +                        +         N +    +    + 
Sbjct: 1078 ---------GGM---------------------NGKYKPVAADDPKNPLGERWMGLSLKG 1107

Query: 319  -NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +   +H   +P        + ++GC+R+ N  D++  +       +   I
Sbjct: 1108 FSGYGIHGNIKPHQIG---GYYSNGCIRMFN-YDIEEAVFPQMKIGNPVWI 1154


>gi|213581084|ref|ZP_03362910.1| hypothetical protein SentesTyph_07706 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 210

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 5   IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 64

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 65  -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 89

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 90  YIGRLYAI--HGTNA--NFGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 137


>gi|238061899|ref|ZP_04606608.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
 gi|237883710|gb|EEP72538.1| cell wall hydrolase/autolysin [Micromonospora sp. ATCC 39149]
          Length = 388

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 66/206 (32%), Gaps = 12/206 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G+   +V  +R  L     L P    +  FD   E AV+ FQ   GL   G V +
Sbjct: 2   RPIRTGDRGPAVSEIRAVLTGLDLLTPGSSAADEFDTETERAVRAFQQSRGLSVDGRVGA 61

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T  A++     R R     L     + E   G     +         +E G    R+  
Sbjct: 62  ETWRALD---AARWRLGARTL--YHAVPEPLTGEDVRSLQE-----RLLEMGYDVGRADA 111

Query: 220 IVG-RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + G R  R        +              ++++    ++   PQ+L++++  +     
Sbjct: 112 VYGVRTSRAVAQFQREMGLKPDGSCGPHTMRVLRRLGRKVVGGRPQWLRESD-AIRQAGP 170

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGK 304
             V    V        +       G 
Sbjct: 171 TLVGRTVVIDPGHGGTDPGVVVPDGP 196



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      W  L      LG                V+ L+ERL+  G 
Sbjct: 45  RAFQQSRGLSVDGRVGAETWRALDAARWRLGARTLYHAVPEPLTGEDVRSLQERLLEMGY 104

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     +      AV  FQ   GL P G     T+  +  
Sbjct: 105 DVGRA--DAVYGVRTSRAVAQFQREMGLKPDGSCGPHTMRVLRR 146


>gi|229174826|ref|ZP_04302346.1| hypothetical protein bcere0006_39100 [Bacillus cereus MM3]
 gi|228608494|gb|EEK65796.1| hypothetical protein bcere0006_39100 [Bacillus cereus MM3]
          Length = 186

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|223986583|ref|ZP_03636578.1| hypothetical protein HOLDEFILI_03900 [Holdemania filiformis DSM
           12042]
 gi|223961442|gb|EEF65959.1| hypothetical protein HOLDEFILI_03900 [Holdemania filiformis DSM
           12042]
          Length = 159

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 20  LPMGLSLVEKPIHASV----LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           +   L L    I        +++I+     + + +  D    +      +       + +
Sbjct: 1   MAYTLQLGSNGIDVKKMQYYINQILAAPNLTPMEE--DGIYGQKTEFAVAVF-----QYV 53

Query: 76  AQTEKAIAFYQDILSRGGWPEL----------------PIRPLHLGNSSVSVQRLRERLI 119
                       I+ +  W ++                  R L +GN  + VQ+ ++ L 
Sbjct: 54  YHL-----NVDGIIGQATWDKIIQEFKNLPSPAMERNKSTRTLRVGNIGLGVQKFQQYLN 108

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +P   +   F    + AV+ FQ  +GL+  G++ ++T + +
Sbjct: 109 ELIAPNPRLVVDGNFGQNTKRAVETFQALNGLNVDGVIGNNTWDRI 154


>gi|198243048|ref|YP_002214802.1| hypothetical protein SeD_A0935 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197937564|gb|ACH74897.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
          Length = 306

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 101 IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 161 -----------------------------------YRAVGEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 233


>gi|326622555|gb|EGE28900.1| ErfK/YbiS/YcfS/YnhG family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 304

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 99  IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 159 -----------------------------------YRAVGEPLPAVVPAGPDNPMGLYAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 231


>gi|295096482|emb|CBK85572.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 306

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TP+   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPLNWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            + A                                             G  N M    +
Sbjct: 161 YIAA-----------------------------------GEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN      +L  + P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFDNVPVGTRVQF 233


>gi|288550103|ref|ZP_05969281.2| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
 gi|288316740|gb|EFC55678.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cancerogenus ATCC
           35316]
          Length = 306

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TP+   +++ R    P W     +  +
Sbjct: 101 IVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPLNWTTKVERKKAGPTWTPTAKMHAE 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
            + A                                             G  N M    +
Sbjct: 161 YIAA-----------------------------------GEPLPAVVPAGPDNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L  + P  +R   
Sbjct: 186 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFDNVPVGTRVQF 233


>gi|213419377|ref|ZP_03352443.1| hypothetical protein Salmonentericaenterica_16811 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 233

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 28  IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 87

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 88  -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 112

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GCVR+RN  D   +L ++ P  +R   
Sbjct: 113 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVPVGTRVQF 160


>gi|218899313|ref|YP_002447724.1| hypothetical protein BCG9842_B0975 [Bacillus cereus G9842]
 gi|218544812|gb|ACK97206.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 186

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|16331313|ref|NP_442041.1| hypothetical protein slr0769 [Synechocystis sp. PCC 6803]
 gi|1001486|dbj|BAA10111.1| slr0769 [Synechocystis sp. PCC 6803]
          Length = 204

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 57/172 (33%), Gaps = 52/172 (30%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            ++++ +    + A +N KV     V VG+   +TP  + ++ +++ NP W  P      
Sbjct: 74  THIVLVLGERKVYAYQNDKVLASYPVAVGKKGWETPQGNFQVIQMVENPVWENPW----- 128

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                   GK+V                          +    I
Sbjct: 129 -----------------------NGKKVAASL-------------------DGPIGIRWI 146

Query: 314 EFYS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            F+S  +N    H TP+           + GCVR+RN  ++ L   +   TP
Sbjct: 147 GFWSDGKNTIGFHGTPKKHEHFLGT-AASHGCVRMRNQDVVALFNMVQNGTP 197


>gi|189490384|ref|YP_001956952.1| virion structural protein [Pseudomonas phage 201phi2-1]
 gi|164609449|gb|ABY63058.1| virion structural protein [Pseudomonas phage 201phi2-1]
          Length = 262

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 67/202 (33%), Gaps = 21/202 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V RL+ +LI  G    S      F    E AVK  Q+R  L   G+V ++T
Sbjct: 3   LKNGSKGDDVIRLQRKLIGLGY---SVKDDGVFGDNTEKAVKAVQLRFNLKDDGIVGNNT 59

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
              ++ P   R     +     +          Y+ V++PA     V+  K         
Sbjct: 60  WAVLDTPTTTRP---ALTDKDYQW------AADYLQVDLPA-----VKAVKEVEAPAGGF 105

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN----NIHMIDEK 277
               R T +    +         + P      +   + +    YL  +     +   ++ 
Sbjct: 106 LPDGRVTILYERHVMFKRLRVNGINPEPFAAANPSIVNKSTGGYLGKSAEYTRLEQAEKI 165

Query: 278 GKEVFVEEVDWNSPEPPNFIFR 299
            +   +E   W + +   + ++
Sbjct: 166 DEVSALESCSWGAYQIMGYHWK 187


>gi|257057905|ref|YP_003135737.1| N-acetylmuramoyl-L-alanine amidase [Saccharomonospora viridis DSM
           43017]
 gi|256587777|gb|ACU98910.1| N-acetylmuramoyl-L-alanine amidase [Saccharomonospora viridis DSM
           43017]
          Length = 382

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV---AFDAYVESAVKLFQMRHGLDPSGM 156
           R L  G++   V  +R  L     L PS+  +     FD  VE AV+ FQ + GL   G+
Sbjct: 2   RVLRRGDTGPEVAEIRSMLSALDLLPPSEEANGHAAFFDQQVEHAVRAFQQQRGLITDGV 61

Query: 157 VDSSTLEAMNVP 168
           V  +T  A+   
Sbjct: 62  VGPATYRALRGS 73



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 69  IISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQ 112
               + +    +A    + +++ G      +  L     HLG+               V 
Sbjct: 37  AFFDQQVEHAVRAFQQQRGLITDGVVGPATYRALRGSTYHLGSRPLAYSVSSPVHGDDVF 96

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDL 171
            L+ERL   G    +      F    E A+K FQ  +GL   G+   +T+ A+       
Sbjct: 97  ALQERLTELGY--DAGRPDGGFGPQTERALKNFQRDYGLVVDGICGPATVRALRQLSPRA 154

Query: 172 R 172
           R
Sbjct: 155 R 155


>gi|188534376|ref|YP_001908173.1| Conserved hypothetical protein YbiS [Erwinia tasmaniensis Et1/99]
 gi|188029418|emb|CAO97295.1| Conserved hypothetical protein YbiS [Erwinia tasmaniensis Et1/99]
          Length = 361

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G    +   + +G + + TPI   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGTNTVVVLPIGIGELGKDTPIDWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W   + + Q+                                    +    +       G
Sbjct: 151 WTPTKKMHQE-----------------------------------YAARGESLPEVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-AEDI-QWLFSNVPVG 228

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R        +  V+   +  V++   +
Sbjct: 229 TRVQFIDQPVKAAVEPDGSRYVEVHNPL 256


>gi|89897696|ref|YP_521183.1| hypothetical protein DSY4950 [Desulfitobacterium hafniense Y51]
 gi|89337144|dbj|BAE86739.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 231

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           IL+ G +  L  R L  G+    V  L+++L   G +     +   + +  ++AV  FQ 
Sbjct: 22  ILASGAYGALGDRALSQGSRGSEVTELQKKLASLGYVV--GKVDGVYGSKTKAAVTRFQK 79

Query: 148 RHGLDPSGMVDSSTLEAMN 166
             GL   G+  + T++ + 
Sbjct: 80  ERGLKVDGIAGAQTIKELK 98


>gi|219670845|ref|YP_002461280.1| spore cortex-lytic enzyme [Desulfitobacterium hafniense DCB-2]
 gi|219541105|gb|ACL22844.1| spore cortex-lytic enzyme [Desulfitobacterium hafniense DCB-2]
          Length = 228

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           IL+ G +  L  R L  G+    V  L+++L   G +     +   + +  ++AV  FQ 
Sbjct: 19  ILASGAYGALGDRALSQGSRGSEVTELQKKLASLGYVV--GKVDGVYGSKTKAAVTRFQK 76

Query: 148 RHGLDPSGMVDSSTLEAMN 166
             GL   G+  + T++ + 
Sbjct: 77  ERGLKVDGIAGAQTIKELK 95


>gi|317047415|ref|YP_004115063.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
 gi|316949032|gb|ADU68507.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. At-9b]
          Length = 354

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 72/230 (31%), Gaps = 49/230 (21%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVG 222
             N  VD+ + +   NL+  ++L+        +++N     L     G K  +   + +G
Sbjct: 69  EANPGVDVYLPKAGTNLVIPQQLILPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIG 128

Query: 223 RVDRQTPI-LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
            + + TPI   + + R    P W   +++  +                            
Sbjct: 129 ELGKDTPINWTTSVQRKKAGPTWTPTKAMHAE---------------------------- 160

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                   +    +       G  N M    +          H T     F   +R  + 
Sbjct: 161 -------YAARGESIPEVFPAGPDNPMGLYALYIGRLYAV--HGTNA--NFGIGLR-VSH 208

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHI-----EEVVKTRKTTPVKLATEV 386
           GCVR+R   D+  WL  + P  +R        +  V+   +  V++   +
Sbjct: 209 GCVRLR-ADDI-KWLFDNVPVGTRVQFIDQPVKATVEPDGSRYVEVHNPL 256


>gi|23013110|ref|ZP_00053052.1| COG2989: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 84

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIY 410
           +L   +L   P W     E +   R T  + L     V+ +Y +AW+ +  I+ FRDDIY
Sbjct: 2   ELGELMLG--PRWQGKLAENIAANRSTRTLMLERTTQVYMMYWTAWTDEAGILHFRDDIY 59

Query: 411 GLDNVHVGII---PLPEDHP 427
           G D   +  +     P   P
Sbjct: 60  GHDRRLMTAMERSRSPAPRP 79


>gi|228935470|ref|ZP_04098288.1| hypothetical protein bthur0009_39170 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228824222|gb|EEM70036.1| hypothetical protein bthur0009_39170 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 186

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             ++P Y+  N                                 
Sbjct: 73  -----------------AKNPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|134103806|ref|YP_001109467.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291005736|ref|ZP_06563709.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133916429|emb|CAM06542.1| N-acetylmuramoyl-L-alanine amidase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 383

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           LH G+   +V  +R  L   G L           +DA VE AV++FQ + GL   G+V  
Sbjct: 4   LHRGDVGPAVAEIRNTLAALGLLPAPNGRPDPATYDAAVEHAVRVFQQQRGLITDGVVGP 63

Query: 160 STLEAMN 166
           +T  A+ 
Sbjct: 64  ATYRALT 70



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 14/148 (9%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +H   +   + E  +++                  D  +     + Q ++ +     ++ 
Sbjct: 4   LHRGDVGPAVAEIRNTLAALGLLPAPNGRPDPATYDAAVEHAVRVFQQQRGLIT-DGVVG 62

Query: 91  RGGWPELPIRPLHLGN-----------SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
              +  L      LG+           S   V  L+ERL+  G    +      F    E
Sbjct: 63  PATYRALTDARWRLGDRSLAFLVSKPVSGDDVFALQERLLELGY--DAGRPDGIFGHETE 120

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            A++ FQ  +GL+P G+    TL A+  
Sbjct: 121 QALRSFQRDYGLNPDGICGPGTLRALRQ 148


>gi|108805098|ref|YP_645035.1| cell wall hydrolase/autolysin [Rubrobacter xylanophilus DSM 9941]
 gi|108766341|gb|ABG05223.1| cell wall hydrolase/autolysin [Rubrobacter xylanophilus DSM 9941]
          Length = 358

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  L+ RL   G    ++G+   F    E AV+ FQ R G+   G+V  
Sbjct: 2   RTLRRGDRGREVVDLQTRLQALGYDLGNRGIDGVFREETELAVRAFQQRVGILADGLVGP 61

Query: 160 STLEAM 165
            T   +
Sbjct: 62  VTWREL 67



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 12/91 (13%)

Query: 93  GWPELPIRPLHLG----------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            W EL       G               V  ++  L   G       ++  FD     AV
Sbjct: 63  TWRELVEAGYRPGGRLLYLRQPPFRGADVMEMQRMLNDLGF--DPGAVNGLFDGRTARAV 120

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           + FQ   GL P G+VD +  + +++     +
Sbjct: 121 RDFQKNAGLQPDGVVDGAVFKTLSIYAAQTL 151


>gi|229019363|ref|ZP_04176187.1| hypothetical protein bcere0030_38690 [Bacillus cereus AH1273]
 gi|229025609|ref|ZP_04182016.1| hypothetical protein bcere0029_39050 [Bacillus cereus AH1272]
 gi|228735703|gb|EEL86291.1| hypothetical protein bcere0029_39050 [Bacillus cereus AH1272]
 gi|228741931|gb|EEL92107.1| hypothetical protein bcere0030_38690 [Bacillus cereus AH1273]
          Length = 186

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 57/194 (29%), Gaps = 61/194 (31%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             + G  +++VN     L  +++GK+     V  G+ +  TP     I            
Sbjct: 22  NPRTGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK--------- 72

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KIN 306
                        +DP Y+  +                                 G   N
Sbjct: 73  ------------AKDPYYIAKD------------------------------IPGGSPKN 90

Query: 307 AMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            + S  I F       +   +H T +P        + + GC+R++       +L    P 
Sbjct: 91  PLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLFDRIPI 145

Query: 363 WSRYHIEEVVKTRK 376
            ++  I +  K+ +
Sbjct: 146 GTKVWIVKSKKSFQ 159


>gi|256752566|ref|ZP_05493421.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748563|gb|EEU61612.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 327

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|167036871|ref|YP_001664449.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039577|ref|YP_001662562.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300915173|ref|ZP_07132488.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725097|ref|YP_003904848.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|320115293|ref|YP_004185452.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853817|gb|ABY92226.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|166855705|gb|ABY94113.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300888897|gb|EFK84044.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582158|gb|ADN55557.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|319928384|gb|ADV79069.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 327

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|242240654|ref|YP_002988835.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
 gi|242132711|gb|ACS87013.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech703]
          Length = 366

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 83/280 (29%), Gaps = 67/280 (23%)

Query: 124 LDPSKGLSVAFDAYVE--------SAVKLF--QMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
                  S      ++        +A++ F  Q + GL          L   N  +D+ +
Sbjct: 35  YPLPAPNSRLVGENIQVTIPTDSTAALEHFAAQYQMGLSN--------LLEANPGIDVYL 86

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-L 231
            +    +   ++L+        +++N     L     G K  +   + +G++ + TPI  
Sbjct: 87  PKPGSTMTVPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGKDTPINW 146

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            + + R    P W    ++  +           Y                          
Sbjct: 147 VTSVQRKKERPTWTPTAAMHAE-----------YAARGEF-------------------- 175

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                      G  N M    +   +      H T     F   +R  + GCVR+R+   
Sbjct: 176 ----LPKIYPAGPDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRDKD- 225

Query: 352 LDVWLLKDTPTWSR-----YHIEEVVKTRKTTPVKLATEV 386
              +L  + P  +R       ++  V+   +  V++   +
Sbjct: 226 -IKFLFSNVPVGTRVQFINEPVKATVEPDGSRYVEVHNPL 264


>gi|228967193|ref|ZP_04128229.1| hypothetical protein bthur0004_39970 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228792562|gb|EEM40128.1| hypothetical protein bthur0004_39970 [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 173

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L +    G  +++VN     L  +++GK+   S V  G+ +  TP     +       
Sbjct: 4   WPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVSPVATGKTNELTPEGTFDVVMK---- 59

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 60  -----------------AKDPYYIAKD------------------------------IPG 72

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 73  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 127

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 128 DRIPIGTKVWIVKSKKSFQ 146


>gi|227326330|ref|ZP_03830354.1| hypothetical protein PcarcW_03064 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 355

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 89  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPT 148

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 149 WTPTAKMHAE-----------------------------------YAARGETLQKVFPAG 173

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R   D+  +L  + P  
Sbjct: 174 PDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFNNVPVG 226

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 227 TRVQFINEPVKATVEPDGSRYVEVHNPL 254


>gi|254818669|ref|ZP_05223670.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 407

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS---------VAFDAYVESAVKLFQMRH 149
              L  G+ S +V  +R  L   G LD S               FDA ++ AV+ FQ   
Sbjct: 9   GDALRCGDRSAAVTEIRATLASLGMLDGSDDEDLTTGRHVALELFDAELDQAVRAFQQHR 68

Query: 150 GLDPSGMVDSSTLEAMN 166
           GL   G+V  +T  A+ 
Sbjct: 69  GLLVDGIVGEATYRALK 85



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 19/156 (12%)

Query: 27  VEKPIHASVLDEIINESYHSIVN-DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
               +        + E   ++ +    D                +    + Q  +A   +
Sbjct: 8   YGDALRCGDRSAAVTEIRATLASLGMLDGSDDEDLTTGRHVALELFDAELDQAVRAFQQH 67

Query: 86  QDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKG 129
           + +L  G      +  L      LG                V  L+ RL   G    +  
Sbjct: 68  RGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLFGDDVATLQARLQDLGFY--TGL 125

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 126 VDGYFGLQTHNALMSYQREYGLSADGICGPETLRSL 161


>gi|115380132|ref|ZP_01467166.1| hypothetical protein STIAU_0960 [Stigmatella aurantiaca DW4/3-1]
 gi|310822017|ref|YP_003954375.1| hypothetical protein STAUR_4769 [Stigmatella aurantiaca DW4/3-1]
 gi|115362855|gb|EAU62056.1| hypothetical protein STIAU_0960 [Stigmatella aurantiaca DW4/3-1]
 gi|309395089|gb|ADO72548.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 529

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V+ L+ RL   G           F    E+AVK FQ +H L+  G+V   
Sbjct: 234 VLKEGSKGTEVKTLQGRLEKLGF--ELGQQDGVFGPKTEAAVKRFQSKHNLEADGIVGPK 291

Query: 161 TLEAMNVPVDLRIRQ 175
           T +A+   +  R  Q
Sbjct: 292 THQAIEKALSARTEQ 306



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 34/106 (32%), Gaps = 19/106 (17%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPI--------RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           A+TE+A        S   W + P           L  G    SV+ L++ L +       
Sbjct: 302 ARTEQAKRQSDAFESGSKWKDAPALADVKSGKEHLQQGMEGGSVKHLQKLLGVE------ 355

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPS---GMVDSSTLEAMNVPVD 170
                 F      AV  FQ  H LD     G V   TL AM     
Sbjct: 356 --TDGKFGPNTRKAVAEFQREHRLDVGDAAGSVGPKTLAAMEKAAR 399


>gi|117929357|ref|YP_873908.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
 gi|117649820|gb|ABK53922.1| cell wall hydrolase/autolysin [Acidothermus cellulolyticus 11B]
          Length = 378

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPS 154
           + LG+ S +V  +R RL   G L  + G           FD  V+ A++ FQ + GL   
Sbjct: 7   MRLGDRSFAVAEIRHRLAHLGLLSRTNGDHDCVRAACDVFDETVDHAIRAFQQQRGLRTD 66

Query: 155 GMVDSSTLEAMN 166
           G+VD+ T  A++
Sbjct: 67  GVVDAETFRALD 78



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG- 92
                 + E  H + +    +        + +   +   ET+    +A    + + + G 
Sbjct: 10  GDRSFAVAEIRHRLAHLGLLSRTNGDHDCVRAACDVF-DETVDHAIRAFQQQRGLRTDGV 68

Query: 93  ----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
                +  L      LG+               V  L+ RL   G           F   
Sbjct: 69  VDAETFRALDEAKWRLGDRVLSYVPGHPLVGDDVAALQRRLCDMGF--DCGRCDGIFGPL 126

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            E+A++ FQ   GL   G   + TL A+  
Sbjct: 127 TEAALREFQRNVGLPADGTCGADTLRALQR 156


>gi|323499427|ref|ZP_08104399.1| general secretion pathway protein A [Vibrio sinaloensis DSM 21326]
 gi|323315483|gb|EGA68522.1| general secretion pathway protein A [Vibrio sinaloensis DSM 21326]
          Length = 536

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ I     W +     L  G    +V +L   L +   L      S  +D+ +E  VKL
Sbjct: 445 YRHI-----WRQYWSTALKPGMQGEAVLQLEHHLSVL--LGQPSLNSNVYDSALEEKVKL 497

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           FQ   GL   G+    TLE +   +   + QL  +  
Sbjct: 498 FQRWQGLAVDGIAGKRTLERLESLIRENVPQLNQSKE 534


>gi|229104755|ref|ZP_04235416.1| hypothetical protein bcere0019_38970 [Bacillus cereus Rock3-28]
 gi|228678628|gb|EEL32844.1| hypothetical protein bcere0019_38970 [Bacillus cereus Rock3-28]
          Length = 186

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 57/200 (28%), Gaps = 63/200 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKIFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRKT 377
              P  ++  I +  KT + 
Sbjct: 141 DRIPIGTKVWIVKSKKTFQR 160


>gi|317494173|ref|ZP_07952589.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917946|gb|EFV39289.1| ykud domain-containing protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 306

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 58/220 (26%), Gaps = 62/220 (28%)

Query: 192 GLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRS 249
               +++N     L     G K  +   + +G + R TP+   + + R    P W  P  
Sbjct: 97  PREGIIINSAEMRLYYYPKGSKTVVVLPIGIGELGRDTPMNWVTSVQRKKAGPTWT-PTK 155

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
            + ++                                   +            G  N M 
Sbjct: 156 KMHEE----------------------------------YAANGEILPQVFPAGPDNPMG 181

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHI 368
              +          H T     F   +R  + GCVR+R+  D   +L  + P  +R   I
Sbjct: 182 LYALYIGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRD--DDIKYLFDNVPVGTRLQFI 234

Query: 369 EEVVK-----------------TRKTTPVKLATEVPVHFV 391
            E VK                 +           VPV   
Sbjct: 235 NEPVKATVEPDGSRYIEVHNPLSTTEQQFNSDAPVPVVLT 274


>gi|50119764|ref|YP_048931.1| hypothetical protein ECA0821 [Pectobacterium atrosepticum SCRI1043]
 gi|49610290|emb|CAG73734.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
          Length = 365

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 59/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 91  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 151 WTPTAKMHAE-----------------------------------YAARGETLQKVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R   D+  +L    P  
Sbjct: 176 PDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFNSVPVG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 229 TRVQFINEPVKATVEPDGSRYVEVHNPL 256


>gi|209525841|ref|ZP_03274377.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209493814|gb|EDZ94133.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 472

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 6/117 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V +++ RL   G L  +      F    ++AV  FQ  + L   G+V  +
Sbjct: 53  VLAIGDFGPEVTQIQNRLRALGYLSANAT--GYFGEETQNAVIRFQRDNRLVQDGIVGPN 110

Query: 161 TLEAMNVP----VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           T+ A+       +   +  + V+  ++  L     G     +     +L    N   
Sbjct: 111 TVVALIATNQNAISRPLNTIPVSDRQLIGLGLGDSGPGVTSLQNRLRNLGFFNNNST 167



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG+    V  L++RL   G    +  +   F      AV  FQ  + +  +G V
Sbjct: 300 PSSILLLGSRGADVIALQQRLQQLGYY--TGMIDGVFGESTRVAVLRFQRDNAITQTGQV 357

Query: 158 DSST 161
             +T
Sbjct: 358 GPTT 361



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           GN+  +V+R++ RL   G    +  ++  FD   ++AV  FQ  + +  +G+V  +T
Sbjct: 400 GNAGENVRRIQRRLRELGFY--NGPINGFFDGQTQNAVIQFQQAYNITTTGIVGPTT 454



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 91  RGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             G   L     L  G+    V  ++  L   G       ++  +D     AV+ FQM +
Sbjct: 202 NRGTGSLAGNVSLGPGSFGPIVGLVQRELQRLGFFP--GQITNFYDEVTFQAVRNFQMVN 259

Query: 150 GLDPSGMVDSST 161
           GL P+G +  +T
Sbjct: 260 GLTPTGFIGPTT 271



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  + +      F      AV  FQ  + +  +G+V   T
Sbjct: 140 LGLGDSGPGVTSLQNRLRNLGFFNNNST--GYFGPITRDAVIRFQQANLIAATGLVTEDT 197

Query: 162 LE 163
           L 
Sbjct: 198 LA 199


>gi|284053689|ref|ZP_06383899.1| Peptidoglycan-binding domain 1 protein [Arthrospira platensis str.
           Paraca]
          Length = 130

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 3/94 (3%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           T+A  E        I++R    + P  P L  G+    V  L+ RL   G  +     + 
Sbjct: 16  TVASAESLTNRETQIVARATPTQNPTSPVLRRGSRGQDVAELQIRLRELGYFNNPNLGN- 74

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            F    + AV+ FQ   GL P G+V   T +A+ 
Sbjct: 75  -FGPITQQAVRQFQSDRGLRPDGIVGQETRQALA 107


>gi|227113507|ref|ZP_03827163.1| hypothetical protein PcarbP_11112 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 357

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 89  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPT 148

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 149 WTPTAKMHAE-----------------------------------YAARGETLQKVFPAG 173

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R+  D   +L  + P  
Sbjct: 174 PDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRD--DDIKYLFNNVPVG 226

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 227 TRVQFINEPVKATVEPDGSRYVEVHNPL 254


>gi|118620070|ref|YP_908402.1| hydrolase [Mycobacterium ulcerans Agy99]
 gi|118572180|gb|ABL06931.1| hydrolase [Mycobacterium ulcerans Agy99]
          Length = 406

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD                FD  ++ AV+ FQ   G
Sbjct: 9   GDTLRCGDRSAAVAEIRAALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALR 84



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 13/90 (14%)

Query: 87  DILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFD 135
            I+    +  L      LG                V  L+ RL   G    +  +   F 
Sbjct: 73  GIVGEATYRALREASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLVDGYFG 130

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +A+  +Q  +G+   G+    TL ++
Sbjct: 131 LQTHNALMSYQREYGMSADGICGPETLRSL 160


>gi|318041244|ref|ZP_07973200.1| hypothetical protein SCB01_06021 [Synechococcus sp. CB0101]
          Length = 192

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 51/180 (28%), Gaps = 71/180 (39%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  +++G++  R    VG    +TP    ++  ++  P W  P               
Sbjct: 58  RQLMVLKDGRLLRRYPAAVGTEGWETPAGRHQVLEMVPYPIWEHP--------------- 102

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY------ 316
                          GK+V                    PG  N + S  I FY      
Sbjct: 103 -------------SNGKQV-------------------GPGPNNPLGSRWIGFYRDCTPR 130

Query: 317 -SRNNT------------YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +  +               H TP         R  + GCVR+   N+ ++   +   TP
Sbjct: 131 QNAWDGERYLSVDGCTVAGFHGTPHRWTVG---RAVSHGCVRLFEENVQEVFELVEVGTP 187


>gi|47568212|ref|ZP_00238916.1| protein erfK/srfK precursor [Bacillus cereus G9241]
 gi|47555202|gb|EAL13549.1| protein erfK/srfK precursor [Bacillus cereus G9241]
          Length = 186

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVSIVKSKKSFQ 159


>gi|326390436|ref|ZP_08211994.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993554|gb|EGD51988.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 327

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL   G       +   F+   E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLGF--DPGPIDGIFERKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|183985449|ref|YP_001853740.1| hydrolase [Mycobacterium marinum M]
 gi|183178775|gb|ACC43885.1| hydrolase [Mycobacterium marinum M]
          Length = 406

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD                FD  ++ AV+ FQ   G
Sbjct: 9   GDTLRCGDRSAAVAEIRAALAALGMLDNPDEDLSTGRHIALELFDPELDHAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALR 84



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 13/90 (14%)

Query: 87  DILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFD 135
            I+    +  L      LG                V  L+ RL   G    +  +   F 
Sbjct: 73  GIVGEATYRALREASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLVDGYFG 130

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +A+  +Q  +G+   G+    TL ++
Sbjct: 131 LQTHNALMSYQREYGMSADGICGPETLRSL 160


>gi|311068995|ref|YP_003973918.1| hypothetical protein BATR1942_10280 [Bacillus atrophaeus 1942]
 gi|310869512|gb|ADP32987.1| hypothetical protein BATR1942_10280 [Bacillus atrophaeus 1942]
          Length = 176

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 43/165 (26%), Gaps = 57/165 (34%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV++N  +  L  + + +V     V  G+ D  TP     I     NP     
Sbjct: 21  NPLPGDPYVIINKASNQLAYIVDNQVEGIYQVATGKTDDLTPEGEFSITVKAANP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  NI                                  N 
Sbjct: 76  -----------------YYRKKNIE----------------------------GGAPENP 90

Query: 308 MASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           + +  I F           +H T    L      F ++GC+R+ N
Sbjct: 91  LGARWIGFDAEGTDGRIYGIHGTNRDELIGE---FVSNGCIRMHN 132


>gi|291437660|ref|ZP_06577050.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
 gi|291340555|gb|EFE67511.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
          Length = 277

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 5/144 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+S   V+ L+ RL  +  L         +D   E AVK FQ + GL  +G 
Sbjct: 67  PPRVLWSPGDSGRDVRELQARLRQAAWLFHGPT--GTYDGPTEEAVKGFQGKRGLPRTGR 124

Query: 157 VDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T + +        R     +          +    R + ++  + +L  + +G+  
Sbjct: 125 TDTVTWQRLLGMTREPGRWELYLMGGQPADAPDARCRTGRVLCISKSSRTLRWMVDGRTV 184

Query: 215 LRSTVIVGRVDRQTPILHSRINRI 238
               V  G     T     RI   
Sbjct: 185 STMPVRFGSEYTPTREGVFRIYWK 208


>gi|327191146|gb|EGE58190.1| hypothetical protein RHECNPAF_3350012 [Rhizobium etli CNPAF512]
          Length = 249

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 45/241 (18%)

Query: 124 LDPSKGLSVAFDAYVESAVKL--FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           L       V +   V  + +   FQ R  +  +      T+ A+N  +      ++   +
Sbjct: 45  LGGGTVRPVVYQRPVVQSQQRGLFQRRA-IRQAPQPAPQTVSAINPGIPSIRHPIEPQFL 103

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
                 + +     ++++     L  V +G    R  V VG+   +      +I R    
Sbjct: 104 PQMVDYDTQEKPGTIVIDTNNRFLYLVMDGGKARRYGVGVGKPGFE-WAGAHKITRKQEW 162

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  +I ++               +                            R D
Sbjct: 163 PDWTPPSEMISRE-----------AAKGHY------------------------LPARMD 187

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
            G  N + +  +         +H T  P    +     +SGC+R+RN  ++DL   +   
Sbjct: 188 GGPENPLGARAMYLG-STLYRIHGTNAPWSIGS---AVSSGCIRLRNEDVVDLYDRVRVG 243

Query: 360 T 360
           T
Sbjct: 244 T 244


>gi|327393217|dbj|BAK10639.1| protein YbiS precursor [Pantoea ananatis AJ13355]
          Length = 380

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G K  +   + +G + + TP+   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGELGKDTPLNWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W   +++  +                                    +    N       G
Sbjct: 151 WTPTKAMHAE-----------------------------------YASRGENLPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL    P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLFDHVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|291616791|ref|YP_003519533.1| YbiS [Pantoea ananatis LMG 20103]
 gi|291151821|gb|ADD76405.1| YbiS [Pantoea ananatis LMG 20103]
          Length = 380

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           LL        +++N     L     G K  +   + +G + + TP+   + + R    P 
Sbjct: 91  LLLPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGELGKDTPLNWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W   +++  +                                    +    N       G
Sbjct: 151 WTPTKAMHAE-----------------------------------YASRGENLPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL    P  
Sbjct: 176 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLFDHVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|15616233|ref|NP_244538.1| cell wall lytic activity [Bacillus halodurans C-125]
 gi|10176295|dbj|BAB07390.1| cell wall lytic activity [Bacillus halodurans C-125]
          Length = 416

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 50/164 (30%), Gaps = 28/164 (17%)

Query: 27  VEKPIHASVLDEIINESY-----HSIVNDRFDNFLARVDMGIDSDIP---------IISK 72
               +      + + +           N        R+      +           I   
Sbjct: 123 NSTILRFGSSGQAVRDLQEKLKAKGYYNHSITGQYGRITTEAVREFQRANRLTVDGIAGP 182

Query: 73  ETIAQT-EKAIA----FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           +T+A    +A A     Y   + +          L  G+   +V+ L+  L   G    S
Sbjct: 183 QTLAALTNQAPAASAPQYNAPVQQ-------TTVLRQGSRGDAVRDLQRSLKDLGYYKSS 235

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             +   F A   +AV+ FQ + GL   G+    TL A++V    
Sbjct: 236 --IDGIFGAGTTTAVREFQRKMGLTVDGVAGPQTLNALHVNPTP 277



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G S   V+ L+E L   G        +  F +  E AV+ FQM+HGL   G
Sbjct: 32  ALGDQTLRKGQSHPDVKELQEALKKKGFF-NYHTSTGYFGSITEDAVREFQMKHGLQVDG 90

Query: 156 MVDSSTLEAM 165
           +    TL A+
Sbjct: 91  IAGPQTLNAL 100


>gi|302531346|ref|ZP_07283688.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. AA4]
 gi|302440241|gb|EFL12057.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces sp. AA4]
          Length = 382

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G++   V  +R  L     L P  G      FD  VE AV+ FQ R GL   G+V
Sbjct: 2   RVLRRGDAGPDVAEIRSILAGMDLLPPVAGTERYNTFDVAVEQAVRAFQQRRGLITDGVV 61

Query: 158 DSSTLEAMN 166
             +T +A+ 
Sbjct: 62  GPATYQALK 70



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 18/116 (15%)

Query: 75  IAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERL 118
           + Q  +A    + +++ G      +  L     HLG+               V  L+ERL
Sbjct: 42  VEQAVRAFQQRRGLITDGVVGPATYQALKGASYHLGSRPLQYLLSSPVHGDDVFTLQERL 101

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
              G    +      F    E A++ FQ    L   G+   +T+  ++     R R
Sbjct: 102 TELGF--DAGRPDGYFGPQTERALRTFQRDMRLTSDGICGPATIRELHRLSSPRAR 155


>gi|228941312|ref|ZP_04103865.1| hypothetical protein bthur0008_39510 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228974244|ref|ZP_04134814.1| hypothetical protein bthur0003_39980 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980835|ref|ZP_04141140.1| hypothetical protein bthur0002_40000 [Bacillus thuringiensis Bt407]
 gi|228779004|gb|EEM27266.1| hypothetical protein bthur0002_40000 [Bacillus thuringiensis Bt407]
 gi|228785584|gb|EEM33593.1| hypothetical protein bthur0003_39980 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228818471|gb|EEM64543.1| hypothetical protein bthur0008_39510 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326941930|gb|AEA17826.1| protein erfK/srfK precursor [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 186

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDSFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|229163086|ref|ZP_04291042.1| hypothetical protein bcere0009_38550 [Bacillus cereus R309803]
 gi|228620492|gb|EEK77362.1| hypothetical protein bcere0009_38550 [Bacillus cereus R309803]
          Length = 186

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|42783267|ref|NP_980514.1| hypothetical protein BCE_4221 [Bacillus cereus ATCC 10987]
 gi|42739195|gb|AAS43122.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|324328057|gb|ADY23317.1| hypothetical protein YBT020_20445 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 186

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|317131428|ref|YP_004090742.1| spore cortex-lytic enzyme [Ethanoligenens harbinense YUAN-3]
 gi|315469407|gb|ADU26011.1| spore cortex-lytic enzyme [Ethanoligenens harbinense YUAN-3]
          Length = 231

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG++   V++++ RL   G    +  +   + A   +AV  FQ ++GL   G+  S+TL
Sbjct: 41  RLGSTGSEVRQIQTRLKSWGYY--TGTVDGVYGAGTRAAVIAFQRKNGLTADGVAGSATL 98

Query: 163 EAMNVPV 169
            A+ +P 
Sbjct: 99  RAIGLPA 105


>gi|229075857|ref|ZP_04208833.1| hypothetical protein bcere0024_38670 [Bacillus cereus Rock4-18]
 gi|229098620|ref|ZP_04229560.1| hypothetical protein bcere0020_38480 [Bacillus cereus Rock3-29]
 gi|229117646|ref|ZP_04247017.1| hypothetical protein bcere0017_39190 [Bacillus cereus Rock1-3]
 gi|228665825|gb|EEL21296.1| hypothetical protein bcere0017_39190 [Bacillus cereus Rock1-3]
 gi|228684699|gb|EEL38637.1| hypothetical protein bcere0020_38480 [Bacillus cereus Rock3-29]
 gi|228707172|gb|EEL59369.1| hypothetical protein bcere0024_38670 [Bacillus cereus Rock4-18]
          Length = 186

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKIFPVATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  KT +
Sbjct: 141 DRIPIGTKVWIVKSKKTFQ 159


>gi|294501172|ref|YP_003564872.1| hypothetical protein BMQ_4428 [Bacillus megaterium QM B1551]
 gi|294351109|gb|ADE71438.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 174

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 48/182 (26%), Gaps = 59/182 (32%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  Y+++N  +  L  ++N ++     V  G+    TP     +     NP     
Sbjct: 20  NPLPNDPYIIINKQSNELAYIQNKEIKQIIKVATGKTVNLTPEGEFTVTVKAVNP----- 74

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y + NNI                                  N 
Sbjct: 75  -----------------YYRRNNIE----------------------------GGAPQNP 89

Query: 308 MASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +    I F           +H T +P        + ++GC+RV N  +  L   +   T 
Sbjct: 90  LGVRWIGFDARETDGRIYGIHGTNQPDSIGK---YVSNGCIRVENREVSHLYDQVPLGTK 146

Query: 362 TW 363
            W
Sbjct: 147 VW 148


>gi|219668958|ref|YP_002459393.1| peptidoglycan-binding protein [Desulfitobacterium hafniense DCB-2]
 gi|219539218|gb|ACL20957.1| Peptidoglycan-binding domain 1 protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 391

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV +L++ L   G           F    E+AV  FQ   GL P G+V   
Sbjct: 243 TLRQGSRGPSVVQLQQLLTARGF--NPGAADGIFGPRTEAAVIAFQRSSGLTPDGIVGIR 300

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T  A+ V           N
Sbjct: 301 TWTALGVTCTTPPPPPSQN 319



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 45/152 (29%), Gaps = 20/152 (13%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        + +    +    F+   A          P      IA    +      I+
Sbjct: 243 TLRQGSRGPSVVQLQQLLTARGFNPGAADGI-----FGPRTEAAVIAFQRSSGLTPDGIV 297

Query: 90  SRGGWPELPIR-------------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
               W  L +               L +G+   SV+ L+  L   G       +   F +
Sbjct: 298 GIRTWTALGVTCTTPPPPPSQNCPTLRMGSRGASVKELQSLLKAQGF--SPGNIDGIFGS 355

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++AV  FQ   GL   G+V   T  A+ V 
Sbjct: 356 RTQAAVIAFQKSRGLVQDGIVGIRTWTALGVN 387



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G +  SV +L++ L   G       +   F    E+AV  FQ   GL   G+V
Sbjct: 160 PCPTLRQGATGPSVVQLQQLLTSHGF--SPGAIDGIFGPRTEAAVIAFQGSRGLVQDGIV 217

Query: 158 DSSTLEAMNVP 168
              T  A+ V 
Sbjct: 218 GVRTWTALGVN 228



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+   SV  L++ L   G       +   F     +AV  FQ   GL   G+V
Sbjct: 84  PCPVLRQGSQGPSVVHLQQLLTSHGF--SPGAIDGIFGPRTHAAVVAFQGSRGLVQDGVV 141

Query: 158 DSSTLEAMNVP 168
              T  A+ V 
Sbjct: 142 GVKTWTALGVN 152


>gi|75907389|ref|YP_321685.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701114|gb|ABA20790.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 412

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 6/82 (7%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV+ L+++L  +G       ++  +D   E AV+ FQ   GL   G+V +S
Sbjct: 65  ALERGDQGPSVRNLQQKLQQAGFY--QAPVTQVYDFSTEEAVRRFQEAAGLPVDGVVGAS 122

Query: 161 TL----EAMNVPVDLRIRQLQV 178
           TL    +  + PV  +++Q   
Sbjct: 123 TLEKLDQWRSTPVANQVQQYTT 144



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L++RL ++G    +      F    E AVK FQ  + LD  G+V  +T
Sbjct: 204 LVKGDEGEAVRSLQQRLRVAGFYYGNAT--GVFGPITEEAVKRFQTAYKLDVDGIVGPAT 261

Query: 162 LEAMN 166
           +  + 
Sbjct: 262 IRRLP 266



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G+   +V+ L+E+LI +G L      +  F  Y   AVK FQ  + L  SG+  
Sbjct: 284 KDKLTVGDRGEAVRVLQEQLIQAGYL--QGQPNGYFGPYTAEAVKRFQAANYLSASGIAG 341

Query: 159 SSTLEAMNVPVDL 171
            +T   ++  ++ 
Sbjct: 342 PTTRAKLHSSLNQ 354


>gi|89894526|ref|YP_518013.1| hypothetical protein DSY1780 [Desulfitobacterium hafniense Y51]
 gi|89333974|dbj|BAE83569.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 404

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV +L++ L   G           F    E+AV  FQ   GL P G+V   
Sbjct: 256 TLRQGSRGPSVVQLQQLLTARGF--NPGAADGIFGPRTEAAVIAFQRSSGLTPDGIVGIR 313

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T  A+ V           N
Sbjct: 314 TWTALGVTCTTPPPPPSQN 332



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 45/152 (29%), Gaps = 20/152 (13%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        + +    +    F+   A          P      IA    +      I+
Sbjct: 256 TLRQGSRGPSVVQLQQLLTARGFNPGAADGI-----FGPRTEAAVIAFQRSSGLTPDGIV 310

Query: 90  SRGGWPELPIR-------------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
               W  L +               L +G+   SV+ L+  L   G       +   F +
Sbjct: 311 GIRTWTALGVTCTTPPPPPSQNCPTLRMGSRGASVKELQSLLKAQGF--SPGNIDGIFGS 368

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++AV  FQ   GL   G+V   T  A+ V 
Sbjct: 369 RTQAAVIAFQKSRGLVQDGIVGIRTWTALGVN 400



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G +  SV +L++ L   G       +   F    E+AV  FQ   GL   G+V
Sbjct: 168 PCPTLRQGATGPSVVQLQQLLTSHGF--SPGAIDGIFGPRTEAAVIAFQGSRGLVQDGIV 225

Query: 158 DSSTLEAMNVP 168
              T  A+ V 
Sbjct: 226 GVRTWTALGVN 236



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+   SV  L++ L   G       +   F     +AV  FQ   GL   G+V
Sbjct: 92  PCPVLRQGSQGPSVVHLQQLLTSHGF--SPGAIDGIFGPRTHAAVVAFQGSRGLVQDGVV 149

Query: 158 DSSTLEAMNVP 168
              T  A+ V 
Sbjct: 150 GVKTWTALGVN 160


>gi|325290484|ref|YP_004266665.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
 gi|324965885|gb|ADY56664.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
          Length = 228

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+  L  R L  G+    V  L++RL + G    +      F     +AV+LFQ  HGL 
Sbjct: 24  GYSALGDRTLSRGSRGPEVVDLQKRLSMLGY--VTGPQDGIFGRKTNAAVRLFQKEHGLT 81

Query: 153 PSGMVDSSTLEAMNV 167
             GM  ++T+  +  
Sbjct: 82  VDGMAGTNTIRELKR 96


>gi|312898059|ref|ZP_07757465.1| 3D domain protein [Megasphaera micronuciformis F0359]
 gi|310620884|gb|EFQ04438.1| 3D domain protein [Megasphaera micronuciformis F0359]
          Length = 166

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG +   V  ++  LI +G L  + G    F +  ++AV+ FQ  HGL   G+V + T+ 
Sbjct: 6   LGMTGTRVASVQNMLIGTGYL--TDGADGVFGSGTQAAVQRFQADHGLTADGIVGTQTMN 63

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-YVLVNIPAAS 204
           A++      I      +M          G   Y     P A 
Sbjct: 64  ALSTASGQPIPVDNTIVMEATAYTADDPGNSGYTATGQPLAY 105


>gi|226940770|ref|YP_002795844.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
 gi|226715697|gb|ACO74835.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
          Length = 235

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 42/149 (28%), Gaps = 36/149 (24%)

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFE 339
           V        +           PG  N +    I F        MH T  P    +V  F 
Sbjct: 14  VPRSIQQEMARAGKTVQTVVPPGPQNPLGKVFIRFGEPGLGLGMHGTNAP---GSVPGFR 70

Query: 340 TSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWS 397
           + GCVR+RN   +DL                            ++   VPV  +Y S   
Sbjct: 71  SHGCVRLRNEDALDLAS--------------------------RVRYGVPVSVIYQSVLL 104

Query: 398 PKD--SIIQF--RDDIYGLDNVHVGIIPL 422
            +D    +      D YG    +   I  
Sbjct: 105 NQDARGDVWMTAFADRYGKTTANAAQIRT 133


>gi|220918200|ref|YP_002493504.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956054|gb|ACL66438.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 282

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 54/192 (28%), Gaps = 51/192 (26%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVI 220
           L+A   P         V  +    +L        V+VN+    L  +  G    L   + 
Sbjct: 59  LDAFVPPPG------TVATVPTAWILPAAAEAGTVVVNLSEMRLYYLRPGAGPLLSFPIG 112

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V      TP+    + + + +P W    +I ++D                          
Sbjct: 113 VAVEAGATPLGVLTVEQKLVSPTWYPTPAIRRED-------------------------- 146

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P       PG  N + S  +         +H T  P  F    R  +
Sbjct: 147 -------------PELPAAVPPGPENPLGSHALRLSVP-TLLIHGTNRP--FGVGRR-VS 189

Query: 341 SGCVRVRNIIDL 352
            GC+R+    D+
Sbjct: 190 HGCIRLY-PEDM 200


>gi|261404540|ref|YP_003240781.1| peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
 gi|261281003|gb|ACX62974.1| Peptidoglycan-binding domain 1 protein [Paenibacillus sp. Y412MC10]
          Length = 159

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 5/85 (5%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP      L  G+S   V+ L+  L  SG       +  +F A V SAVK FQ R GL 
Sbjct: 36  GWPT-----LRQGSSGGYVRALQSNLWASGYQSTVGSIDGSFGAGVTSAVKAFQSREGLT 90

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQ 177
             G+V S +  AMN  V   +   +
Sbjct: 91  SDGVVGSGSWNAMNKYVTTVVTDYE 115


>gi|289811686|ref|ZP_06542315.1| hypothetical protein Salmonellaentericaenterica_48202 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 216

 Score = 70.8 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 47/168 (27%), Gaps = 44/168 (26%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     G    +   + +G++ + TPI   +++ R    P W     +  +
Sbjct: 89  IIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE 148

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                            G  N M    +
Sbjct: 149 -----------------------------------YRAAGEPLPAVVPAGPDNPMGLYAL 173

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     H T     F   +R  + GCVR+RN  D   +L ++ P
Sbjct: 174 YIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLRN--DDIKFLFENVP 214


>gi|300791154|ref|YP_003771445.1| N-acetylmuramoyl-L-alanine amidase [Amycolatopsis mediterranei U32]
 gi|299800668|gb|ADJ51043.1| N-acetylmuramoyl-L-alanine amidase [Amycolatopsis mediterranei U32]
          Length = 382

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G++   V  +R  L     L P  G      FD  VE AV+ FQ R GL   G+V
Sbjct: 2   RVLRRGDAGPDVAEIRSILAGMDLLPPVTGTDDYDTFDVAVEHAVRAFQQRRGLMTDGIV 61

Query: 158 DSSTLEAMN 166
             +T +A+ 
Sbjct: 62  GPATFQALK 70



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 37/109 (33%), Gaps = 14/109 (12%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLD 125
           Q  + +     I+    +  L     HLG+               V  L+ERL   G   
Sbjct: 50  QQRRGLMT-DGIVGPATFQALKGASYHLGSRPLSYMIASPVHGDDVFTLQERLTELGF-- 106

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
            +      F    E A+K FQ    L P GM   +T+  ++     R R
Sbjct: 107 DAGRPDGYFGPQTERALKTFQRDMRLTPDGMCGPATIRELHRLSSPRAR 155


>gi|325927742|ref|ZP_08188970.1| putative chitinase [Xanthomonas perforans 91-118]
 gi|325541943|gb|EGD13457.1| putative chitinase [Xanthomonas perforans 91-118]
          Length = 584

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 12/121 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S ET        +A A +    +  G        L  G++S  V +L++ L  
Sbjct: 356 DANGKLTSPETFWNQGHQHEAGARHTQAAAASG-----TGALRHGDNSQDVGKLQQDLNR 410

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A+   P   R  Q+
Sbjct: 411 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALAAQPAQTREAQV 470

Query: 177 Q 177
            
Sbjct: 471 A 471


>gi|186684193|ref|YP_001867389.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186466645|gb|ACC82446.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 361

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 5/154 (3%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
                  +     + +++ + S +P++   T   +  A      I        +    L 
Sbjct: 28  RQKSWWTKRSKSFSAIEILLLSAMPLLIASTPLVSIAAPQK---IAQINPGDSISRPNLK 84

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+    V  L+  L + G       +   +     SAV  F+   GL+P G+VD+ST +
Sbjct: 85  VGSQGERVSELQAALKLLGFYS--GAVDGIYSENTASAVARFKQAAGLNPDGVVDASTWQ 142

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
            +     +    +  +  R        +  +   
Sbjct: 143 RLFPNQPVAASTIPSSQPRFNSATNFPVPTQASS 176



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V +L+++L   G L         F    E+AVK  Q R+GL+  G+V  ST
Sbjct: 297 LRIGLRGSEVVKLQQQLKKLGFLKGDADGD--FGETTETAVKAAQKRYGLEADGVVGGST 354

Query: 162 LEAM 165
            E +
Sbjct: 355 WEVL 358


>gi|209548063|ref|YP_002279980.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533819|gb|ACI53754.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 249

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +  V   T+ A+N  +      ++   +      + +     ++++     
Sbjct: 68  FQRRV-IRQAPQVAPQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVIDTNNRF 126

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V +G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 127 LYLVMDGGKARRYGVGVGKPGFE-WAGAHKITRKQEWPDWTPPSEMISRE---------- 175

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 176 -AAKGHY------------------------LPARMDGGAENPLGARAMYLG-STLYRIH 209

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 210 GTNAPWSIGS---AVSSGCIRLRN 230


>gi|291566493|dbj|BAI88765.1| peptidoglycan binding domain protein [Arthrospira platensis
           NIES-39]
          Length = 492

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L LG+    V  L++RL   G    +  +   FD     AV  FQ  +G+  +G V
Sbjct: 299 PSSILVLGSRGADVIALQQRLQQLGYY--TGMIDGVFDESTRVAVVRFQRDNGITQTGQV 356

Query: 158 DSSTLEAMNVPVDLR 172
             +T   +      R
Sbjct: 357 GPTTQFHLARATTQR 371



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V +++ RL   G L  +      F    ++AV  FQ  + L   G+V  +
Sbjct: 52  VLAIGDFGPEVTQIQNRLRELGYLSANAT--GYFGEETQNAVIQFQRDNRLVQDGIVGPN 109

Query: 161 TLEAMNVPVD 170
           T+ A+     
Sbjct: 110 TVVALIATNQ 119



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 16/90 (17%)

Query: 86  QDILSRGGWPELPIRP--------------LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +    R   P +P  P              + +GN+   V+R++ RL   G    +  ++
Sbjct: 366 RATTQRPIIPVVPAGPGSVVRPVVTNPNTYITIGNAGEDVRRIQRRLRELGFY--NGPIN 423

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             FD   ++AV  FQ  + +  +G+V  +T
Sbjct: 424 GFFDGQTQNAVIQFQQAYNITTTGIVGPTT 453



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 91  RGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             G   L     L  G+    V  ++  L   G       ++  +D     AV+ FQM +
Sbjct: 201 NRGTGSLAGNVSLGPGSFGPIVGLVQRELQRLGFFP--GQITNFYDEVTFQAVRNFQMVN 258

Query: 150 GLDPSGMVDSST 161
           GL P+G +  +T
Sbjct: 259 GLTPTGFIGPTT 270



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  + +      F     +AV  FQ  + +  +G+V   T
Sbjct: 139 LGLGDSGPGVTNLQNRLRNLGFFNNNST--GYFGPITRNAVIRFQQANSIAATGLVTEDT 196

Query: 162 LE 163
           L 
Sbjct: 197 LA 198


>gi|75761963|ref|ZP_00741882.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228902663|ref|ZP_04066813.1| hypothetical protein bthur0014_38380 [Bacillus thuringiensis IBL
           4222]
 gi|74490543|gb|EAO53840.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856978|gb|EEN01488.1| hypothetical protein bthur0014_38380 [Bacillus thuringiensis IBL
           4222]
          Length = 186

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 59/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L +    G  +++VN     L  +++GK+   S V  G+ +  TP     +       
Sbjct: 17  WPLGENPRAGDPFIIVNKATNKLAYIDDGKIQKVSPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|51892227|ref|YP_074918.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
 gi|51855916|dbj|BAD40074.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
          Length = 224

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G +  +V+ +++RL   G       +   F    E AV+ FQ ++GL   G+V   
Sbjct: 30  TLRRGATGDAVREVQQRLRDWGYY--EGQVDGRFGPLTEKAVRFFQSKNGLTVDGVVGPE 87

Query: 161 TLEAMN 166
           T  A+ 
Sbjct: 88  TWAALG 93


>gi|304313194|ref|YP_003812792.1| hypothetical protein HDN1F_35800 [gamma proteobacterium HdN1]
 gi|301798927|emb|CBL47163.1| Hypothetical protein HDN1F_35800 [gamma proteobacterium HdN1]
          Length = 458

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 58/202 (28%), Gaps = 60/202 (29%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAV----------ENGKVGLR--------STVIV 221
           L+  + +L      + ++VN+ A  L               GK              V +
Sbjct: 135 LIPSQWILP-NAPRKGIVVNLAAMRLFYYVPPTKASAKSRKGKGTHSSGPIRVITHPVGI 193

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GRV   TP   +RI      P W    +I+++                            
Sbjct: 194 GRVKWNTPQGTTRIVAKNEAPAWRPTAAILKE---------------------------- 225

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                  ++           PG  N M +  +         +H T +P          T 
Sbjct: 226 -------HAEMGDPLPAVVPPGPDNPMGNYVMRLGWPE-YAIHGTNKPASIG---LRGTH 274

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+   +I  L   +  +TP
Sbjct: 275 GCLRMYPEDIEALFQSVPVNTP 296


>gi|297531427|ref|YP_003672702.1| NLP/P60 protein [Geobacillus sp. C56-T3]
 gi|297254679|gb|ADI28125.1| NLP/P60 protein [Geobacillus sp. C56-T3]
          Length = 450

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 23  GLSLVEKPIHASVLDEIINES---YHSIVNDRFDNFLARVDMGIDSD--IPIISKETIAQ 77
            L++  +    S L   + +     +  +   +    A           +P   +     
Sbjct: 98  TLAIGSRGAAVSDLQRWLKQLGYFRYPQITGYYGAVTADAVKQFQQANGLPATGRAD--- 154

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
               +   +   +    P      L +G+    V++L+++L   G    S  ++  +   
Sbjct: 155 -RATLERLKQKATSQ--PATSSDALTIGSRGDDVRKLQQQLKQLGYFTYS-DITGYYGVL 210

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
              AV+ FQ  +GL  +G VD+ T   +   V  +     + + R +
Sbjct: 211 TADAVRRFQRDNGLPVTGAVDNQTAARLASAVKAKTTSPAL-IERER 256



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G SS  + ++++RL   G        +  F A  E AVK FQ    L  +G+VD +T 
Sbjct: 29  KKGMSSPEITQIQQRLKEQGFFT-YPKATGYFGAITEEAVKAFQRAMNLPATGIVDDATY 87

Query: 163 EAMNVPVD 170
             +  P  
Sbjct: 88  AKLKKPAS 95



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+   +V  L+  L   G       ++  + A    AVK FQ  +GL  +G  
Sbjct: 95  SNDTLAIGSRGAAVSDLQRWLKQLGYF-RYPQITGYYGAVTADAVKQFQQANGLPATGRA 153

Query: 158 DSSTLEAMNVPVD 170
           D +TLE +     
Sbjct: 154 DRATLERLKQKAT 166



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VD
Sbjct: 258 AVRLSIGALGEDVKRIQTKLKELGYF--WTAITGYYGTATADAVRRFQQAAQLPATGVVD 315

Query: 159 SSTLEA-MNVPVDLRIRQLQV 178
             T E  +      ++  +++
Sbjct: 316 GETYERLIGQAPAAKLDVIEL 336


>gi|54294361|ref|YP_126776.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens]
 gi|53754193|emb|CAH15670.1| hypothetical protein lpl1430 [Legionella pneumophila str. Lens]
          Length = 244

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 48/175 (27%), Gaps = 42/175 (24%)

Query: 190 KMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +  + V++N+    L     +  V +   V +G+   +TP+  SRI     NP W    
Sbjct: 93  NVPRKGVVINLAEYRLYYFPPDDNVVMTYPVGIGKKGWETPLGLSRIISKEINPTWRPTV 152

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                  +    +                                        PG  N +
Sbjct: 153 K------LQKAAESIGA-----------------------------PIPSEFPPGPHNPL 177

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +         +H +             ++GC+R+   +I  L   +   TP
Sbjct: 178 GQHVLRLGWP-AILIHGSNRVDGIGAK---VSAGCIRMLPDDIEHLYSLVSVGTP 228


>gi|253687096|ref|YP_003016286.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753674|gb|ACT11750.1| ErfK/YbiS/YcfS/YnhG family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 356

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 59/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 89  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTSVQRKKAGPT 148

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    +            G
Sbjct: 149 WTPTAKMHAE-----------------------------------YAARGETLQKVFPAG 173

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +   +      H T     F   +R  + GCVR+R   D+  +L    P  
Sbjct: 174 PDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFDHVPVG 226

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 227 TRVQFINEPVKATVEPDGSRYVEVHNPL 254


>gi|229047844|ref|ZP_04193423.1| hypothetical protein bcere0027_38210 [Bacillus cereus AH676]
 gi|228723505|gb|EEL74871.1| hypothetical protein bcere0027_38210 [Bacillus cereus AH676]
          Length = 186

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 73  -----------------AKDPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|333008911|gb|EGK28371.1| peptidoglycan-binding domain 1 domain protein [Shigella flexneri
           K-272]
 gi|333020221|gb|EGK39491.1| peptidoglycan-binding domain 1 domain protein [Shigella flexneri
           K-227]
          Length = 74

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 359 DTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
               W+   I + +K   T  V +   +PV+  Y++A+   D   Q+R DIY  D
Sbjct: 2   QDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADDRTQYRTDIYNYD 56


>gi|282882201|ref|ZP_06290840.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B]
 gi|281297966|gb|EFA90423.1| ErfK/YbiS/YcfS/YnhG family protein [Peptoniphilus lacrimalis 315-B]
          Length = 269

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 55/211 (26%), Gaps = 64/211 (30%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL--RYVLVN 199
           +K FQ    +  SG +D+ T EA+             N       +         ++ VN
Sbjct: 46  IKKFQATMNIPISGTLDNKTKEAL------------YNKDYKVWDMVTNPPSKGYWIAVN 93

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
                L      K   +  V +G    QTP    +I  +  NP W               
Sbjct: 94  KSRRILTMYMGDKSLGKYPVTLGTSATQTPSGRGKIGNMHKNPAW--------------- 138

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR- 318
                      +                        +         N +    +    + 
Sbjct: 139 ---------GGM---------------------NGKYKPVAADDPKNPLGERWMGLSLKG 168

Query: 319 -NNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +   +H   +P        + ++GC+R+ N
Sbjct: 169 FSGYGIHGNIKPHQIG---GYYSNGCIRMFN 196


>gi|68537190|ref|YP_251895.1| putative hydrolase [Corynebacterium jeikeium K411]
 gi|260579551|ref|ZP_05847422.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           jeikeium ATCC 43734]
 gi|68264789|emb|CAI38277.1| putative hydrolase [Corynebacterium jeikeium K411]
 gi|258602322|gb|EEW15628.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           jeikeium ATCC 43734]
          Length = 395

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 73/220 (33%), Gaps = 37/220 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L+  +G                FD  +  A+K FQ + 
Sbjct: 6   LQVGDRSPRVAEVRGTLARLGLLEGYEGDATGSKSQRWTSEEEVFDETLAEALKAFQQQR 65

Query: 150 GLDPSGMVDSSTLEAMNV---PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           G+   G +   TL A+      +  R+  LQ N       +   +      ++       
Sbjct: 66  GIIADGTITPGTLRALREASYTLGARVLSLQSNQ-----FVGDDVAQLQTQLHDLGFYTS 120

Query: 207 AVENGKVGLRSTVIVGRVDRQ--------TPILHSRINRIMFNPYWVIPRSIIQKDMM-- 256
            V+        + +V               P     ++ +        P+SI +K+ +  
Sbjct: 121 RVDGHFGPRTHSAVVNYQLNYGLNNDGVVGPDTLRALSYLGRRITGGSPQSIREKEQIRS 180

Query: 257 -------ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
                    +  DP     +  +++D    ++  EE+ W+
Sbjct: 181 AGPQLTGKRVVIDPGLGGSDKGYIVDGPFGQISEEEILWD 220



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 27/158 (17%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIIS----KETIAQTEKAIAFYQ 86
           +        + E   ++              G  S           ET+A+  KA    +
Sbjct: 6   LQVGDRSPRVAEVRGTLARLGLLEGYEGDATGSKSQRWTSEEEVFDETLAEALKAFQQQR 65

Query: 87  DILSRGGWPELPIRPLH--------LGNS----------SVSVQRLRERLIISGDLDPSK 128
            I++ G    +    L         LG               V +L+ +L   G      
Sbjct: 66  GIIADG---TITPGTLRALREASYTLGARVLSLQSNQFVGDDVAQLQTQLHDLGFYTSR- 121

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F     SAV  +Q+ +GL+  G+V   TL A++
Sbjct: 122 -VDGHFGPRTHSAVVNYQLNYGLNNDGVVGPDTLRALS 158


>gi|307129489|ref|YP_003881505.1| Protein ybiS [Dickeya dadantii 3937]
 gi|306527018|gb|ADM96948.1| Protein ybiS precursor [Dickeya dadantii 3937]
          Length = 365

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 82/298 (27%), Gaps = 80/298 (26%)

Query: 124 LDPSKGLSVAFDAYVE--------SAVKLF--QMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
                  S      ++         A++ F  Q + GL          L   N  +D+ +
Sbjct: 25  YPLPAPNSRLVGENIQVTIPSDSTDALEHFAAQYQMGLSN--------LLEANPGIDVYL 76

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-L 231
            +    +   ++L+        +++N     L     G K  +   + +G++ + TPI  
Sbjct: 77  PKPGSTMTVPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGKDTPINW 136

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            + + R    P W    ++  +           Y                          
Sbjct: 137 VTSVQRKKERPTWTPTAAMHAE-----------YAARGEF-------------------- 165

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                      G  N M    +   +      H T     F   +R  + GCVR+R+   
Sbjct: 166 ----LPQVYPAGPDNPMGLYALYIGNLYAI--HGTNAN--FGIGLR-VSHGCVRLRDKD- 215

Query: 352 LDVWLLKDTPTWSR-YHIEEVVK-----------------TRKTTPVKLATEVPVHFV 391
              +L    P  +R   I E VK                 +R        T VP+   
Sbjct: 216 -IKYLFDHVPVGTRVQFINEPVKATVEPDGSRYVEVHNPLSRTEEEFNSDTPVPLKLT 272


>gi|307944091|ref|ZP_07659432.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307772437|gb|EFO31657.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 401

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 54/164 (32%), Gaps = 13/164 (7%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-L 102
              + ++  +     +      + P       A  + A   YQ I   G          L
Sbjct: 164 KSGLADELRERDFRAIAR--RYNGPGQVSHYAALMQTA---YQRIAKGGASKFNERGRML 218

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V+ L+ERLI  G           F       V  FQ+ HGL P G+V   T 
Sbjct: 219 RLGSDGYRVKALQERLITLGY---HLQADGDFGPATRRQVVAFQVDHGLKPDGIVGPLTE 275

Query: 163 ----EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
               EA+ +       + ++ +  ++K   Q +     L     
Sbjct: 276 ERVDEAVPINASKIDGRTKLTVSDLRKRGSQTIKSADRLQQGAG 319


>gi|184201995|ref|YP_001856202.1| putative N-acetylmuramoyl-L-alanine amidase [Kocuria rhizophila
           DC2201]
 gi|183582225|dbj|BAG30696.1| putative N-acetylmuramoyl-L-alanine amidase [Kocuria rhizophila
           DC2201]
          Length = 411

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG-----DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P   L  G +   V  LRERL+ +G         +      FD  V+ AV+ FQ R GL 
Sbjct: 6   PGAALRHGMTDRRVAGLRERLVRAGADDAALSPDAATDPTVFDQRVDGAVRGFQQRKGLI 65

Query: 153 PSGMVDSSTLEAMN 166
             G+V   T  A+N
Sbjct: 66  VDGVVGPDTESALN 79



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 48/173 (27%), Gaps = 21/173 (12%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
              +   + D  +      +V    D+     D   D   P +  + +    +     + 
Sbjct: 7   GAALRHGMTDRRVAGLRERLVRAGADDAALSPDAATD---PTVFDQRVDGAVRGFQQRKG 63

Query: 88  ILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLS 131
           ++  G         L      LG+               V+ L+  L + G       L 
Sbjct: 64  LIVDGVVGPDTESALNDAQYALGDRPLSHQRDTPMHGDDVEELQNNLSLLGFY--YGHLD 121

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             F    E AVK  Q   G+   G+V   TL  +             +L   +
Sbjct: 122 GTFARQTEYAVKELQSSLGVPEDGVVGLDTLTGLARVSKKITTSKAFSLRDHR 174


>gi|218288737|ref|ZP_03493000.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241095|gb|EED08271.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 112

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 35/119 (29%), Gaps = 15/119 (12%)

Query: 254 DMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           +++  L     YL +    +       G+ V    +   +           P       +
Sbjct: 5   EIIVDLSDRRLYLLEAGKVIRSFPVGIGRMVTRTPIGQYTIANKE------PNPGGPFGA 58

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             +     +   +H T +P          + GC+R+ N   +  WL    P  +   I 
Sbjct: 59  YWMGLSKPH-YGIHGTNDPSSIGK---LVSHGCIRMYNKDVI--WLAHTVPLGTPVTIR 111


>gi|110635068|ref|YP_675276.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110286052|gb|ABG64111.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 300

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 18/134 (13%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG--GWP 95
            ++                AR       + P  ++ +      A+A Y+ +  +     P
Sbjct: 154 GLMEALRRRDW-----AAFARG-----YNGPGFARNSY-HLRLALA-YRRLAGQAVRSAP 201

Query: 96  ELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                PL   G+   +V+ L+  L  +G           F A  + A+  FQ  HGL   
Sbjct: 202 SQATTPLIRSGDRGAAVRNLQILLSAAGY---PVSADGIFGAKTQQALLSFQRHHGLPAD 258

Query: 155 GMVDSSTLEAMNVP 168
           G+   +T++ +   
Sbjct: 259 GIAGPATMKVLQGS 272


>gi|317130360|ref|YP_004096642.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315475308|gb|ADU31911.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 318

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 42/144 (29%), Gaps = 14/144 (9%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +      + + +    + N  +               P                   I+ 
Sbjct: 182 LRLGSRGQAVRDLQEKLTNQGYHLGSIDGI-----FGPATENAVRKFQRDRGLTIDGIVG 236

Query: 91  RGG-------WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +            +    L  G+   +V+ L+  L   G    + G+   F    E AVK
Sbjct: 237 QNTLQALEKTTATVSSTTLRRGSRGEAVRSLQSDLHSLGY--ETGGIDGIFGPATERAVK 294

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ  +G+   G+V + TL  +  
Sbjct: 295 SFQRTNGITVDGIVGNQTLSKLKQ 318



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+   +V+ L+E+L   G       +   F    E+AV+ FQ   GL   G+V  +T
Sbjct: 182 LRLGSRGQAVRDLQEKLTNQGY--HLGSIDGIFGPATENAVRKFQRDRGLTIDGIVGQNT 239

Query: 162 LEAMNVPVD 170
           L+A+     
Sbjct: 240 LQALEKTTA 248



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 50/187 (26%), Gaps = 59/187 (31%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             +++++N  +  L   E+ K+    +V  GR +  TP    +I   +            
Sbjct: 28  NNQFIIINKASNELAFFEDSKLQKVFSVGTGRENSMTPEGTFKIVNKI------------ 75

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                    ++  Y   N   +                                N +   
Sbjct: 76  ---------KNRPYYSGN---IAGGD--------------------------PQNPLGDR 97

Query: 312 KIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
            +   +R        +H   +         + ++GCVR+ N      WL       +   
Sbjct: 98  WLGINARGTWGTTYAIHGNNDASSIG---GYVSAGCVRMHNSE--VHWLYDRVKINTPVI 152

Query: 368 IEEVVKT 374
           I    ++
Sbjct: 153 ITNSSQS 159


>gi|302389944|ref|YP_003825765.1| spore cortex-lytic enzyme [Thermosediminibacter oceani DSM 16646]
 gi|302200572|gb|ADL08142.1| spore cortex-lytic enzyme [Thermosediminibacter oceani DSM 16646]
          Length = 228

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G+    V +L+ RL   G       +   F    +SAV  FQ   G+   G
Sbjct: 27  TLGDRILKQGSRGDDVAQLQYRLNTLGFWC--GKVDGIFGPKTKSAVMKFQSAKGIKVDG 84

Query: 156 MVDSSTLEAMNVPVDLR 172
           +V   TL AM V    R
Sbjct: 85  IVGPQTLSAMGVYKASR 101


>gi|206970927|ref|ZP_03231878.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|229192362|ref|ZP_04319326.1| hypothetical protein bcere0002_40150 [Bacillus cereus ATCC 10876]
 gi|206733699|gb|EDZ50870.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228591142|gb|EEK48997.1| hypothetical protein bcere0002_40150 [Bacillus cereus ATCC 10876]
          Length = 186

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP  +  +       
Sbjct: 17  WPLGDNPRAGDTFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGNFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|298492542|ref|YP_003722719.1| ErfK/YbiS/YcfS/YnhG family protein ['Nostoc azollae' 0708]
 gi|298234460|gb|ADI65596.1| ErfK/YbiS/YcfS/YnhG family protein ['Nostoc azollae' 0708]
          Length = 273

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 48/169 (28%), Gaps = 54/169 (31%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +V++    +      +V     + VG+   +TP    +I     +P W  P +    +  
Sbjct: 150 IVDLSDRRVYVYRYDEVIASYPIAVGKKGWETPTGEFQIIHKQHDPIWKHPITGQVFE-- 207

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                         G  + +    I F+
Sbjct: 208 ---------------------------------------------AGTDSPLGDRWIGFW 222

Query: 317 S--RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           S  RN    H TP   L        + GC+R+RN  +  L   L   TP
Sbjct: 223 SDGRNEIGFHGTPNTDLIGA---AVSHGCLRMRNSDVRILYEQLSLGTP 268


>gi|33862677|ref|NP_894237.1| hypothetical protein PMT0404 [Prochlorococcus marinus str. MIT
           9313]
 gi|33634593|emb|CAE20579.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 192

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 53/191 (27%), Gaps = 70/191 (36%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
              R+++++  +  L  +E+G +    +V VG    +TP    ++     +P W  P+S 
Sbjct: 47  REGRHLVLDRRSRRLLVLEDGSLIKSFSVAVGMPGWETPTGEFQVLSKTPHPIWEHPQSG 106

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                                                           R   G  N + S
Sbjct: 107 K-----------------------------------------------RIGSGPKNPLGS 119

Query: 311 TKIEFYSRNNT------------------YMHDTPEPILFNNVVRFETSGCVRV--RNII 350
             I FY   N                     H TP         R  + GCVR+   +I 
Sbjct: 120 RWIGFYRDCNGRDAHDGDRWLTIDGCVTSGFHGTPHRWTVG---RAVSHGCVRLFEEDIQ 176

Query: 351 DLDVWLLKDTP 361
            L   +   TP
Sbjct: 177 SLYRLVKIGTP 187


>gi|121533822|ref|ZP_01665649.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
 gi|121307813|gb|EAX48728.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
          Length = 233

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V  L+ +L+  G       +   F      AV  FQ   GL+P G+V + T
Sbjct: 33  LKPGMAGEEVAYLQAKLLELGYYTE--AVDGKFGIQTRLAVMRFQQATGLEPDGVVGALT 90

Query: 162 LEAMNVPVDLRI-----------RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
            +A+    +              +Q+     R         G      +     +  +E+
Sbjct: 91  WQAIREYHEQPELSRSGGNERKGQQIAAFATRYLGTPYAWSGQTPSGFDCSGFIVYVLEH 150


>gi|295706519|ref|YP_003599594.1| hypothetical protein BMD_4414 [Bacillus megaterium DSM 319]
 gi|294804178|gb|ADF41244.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 153

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 48/180 (26%), Gaps = 59/180 (32%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                Y+++N  +  L  ++N ++     V  G+    TP     +     NP       
Sbjct: 1   MPNDPYIIINKQSNELAYIQNKEIKQIIKVATGKTVNLTPEGEFTVTVKAVNP------- 53

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                          Y + +NI                                  N + 
Sbjct: 54  ---------------YYRRSNIE----------------------------GGAPQNPLG 70

Query: 310 STKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
              I F           +H T +P        + ++GC+RV N  +  L   +   T  W
Sbjct: 71  VRWIGFDARETDGRIYGIHGTNQPDSIGK---YVSNGCIRVENREVSHLYDQVPLGTKVW 127


>gi|333026677|ref|ZP_08454741.1| hypothetical protein STTU_4183 [Streptomyces sp. Tu6071]
 gi|332746529|gb|EGJ76970.1| hypothetical protein STTU_4183 [Streptomyces sp. Tu6071]
          Length = 196

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 4/136 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVD 170
            L+ RL   G           F      A+  FQ   GL  SG++D++T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQPT--GYFGDVTAQALAAFQRDRGLAASGVLDAATWARLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            +        +   +   + +  R + V+  + +L  + +G+V     V  G     T  
Sbjct: 61  TKAALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVSVMDVRFGSAYTPTRD 120

Query: 231 LHSRINRIMFNPYWVI 246
              ++     +    I
Sbjct: 121 GTFKVYWKSRDHVSTI 136


>gi|239929324|ref|ZP_04686277.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
          Length = 262

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 4/137 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+S   V+ L+ RL  +  L         +D   E AVK FQ + GL  +G  D+ T +
Sbjct: 59  PGDSGRDVRELQARLRQAAWLFHGPT--GTYDGPTEEAVKGFQGKRGLPRTGRTDTVTWQ 116

Query: 164 AMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            +        R     +          +    R + ++  + +L  + +G+      V  
Sbjct: 117 RLLGMTREPGRWELYLMGGQPADAPDARCRTGRVLCISKSSRTLRWMVDGRTVSTMPVRF 176

Query: 222 GRVDRQTPILHSRINRI 238
           G     T     RI   
Sbjct: 177 GSEYTPTREGVFRIYWK 193


>gi|119511408|ref|ZP_01630520.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119463953|gb|EAW44878.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 267

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG  +  V++L+ RL   G L     +   F    E+AVK  Q R+GL+  G+V  +T
Sbjct: 203 LRLGMRNSEVRKLQARLKQLGFLA--GDVDGDFGMNTEAAVKAAQQRYGLEADGVVGGAT 260

Query: 162 LEAMNV 167
            EA++ 
Sbjct: 261 WEALSR 266



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q I        +    L  G+    V  L+  L + G       +   +     SAV LF
Sbjct: 52  QRIAQATPTASISRPTLRFGSQGERVLELQAALKLLGFYS--GAVDGVYREETASAVSLF 109

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           +    L+P G+VD+ T E +
Sbjct: 110 KRAVALNPDGIVDAMTWERL 129


>gi|150395623|ref|YP_001326090.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150027138|gb|ABR59255.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 246

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 66/234 (28%), Gaps = 48/234 (20%)

Query: 133 AFDAYVESAVKLFQMRHGL---DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            +   V +A +  Q R GL           +++     P    I       +        
Sbjct: 52  VYRQQVPTATRKQQGRRGLVRRPADAAAQQASIARRQKPAKSSIDP---QFLPQMVAYAT 108

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
           +     ++++     L  V       R  V VG+   +      RI R    P W  P+ 
Sbjct: 109 REKPGTIVIDTNNRFLYLVTGKGEARRYGVGVGKPGFE-WAGEHRITRKAEWPDWTPPQE 167

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           +I ++               +                            R D G  N + 
Sbjct: 168 MIARE-----------AAQGHY------------------------LPARMDGGPQNPLG 192

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +  +         +H T  P          +SGC+R+RN  ++DL   +   T 
Sbjct: 193 ARAMYLG-STLYRIHGTNAPWTIGYG---VSSGCIRMRNEDVVDLYERVKVGTK 242


>gi|329295991|ref|ZP_08253327.1| ErfK/YbiS/YcfS/YnhG family protein [Plautia stali symbiont]
          Length = 362

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 53/185 (28%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TP+   + + R    P 
Sbjct: 91  LILPDAPREGIVINSAEMRLYYYPKGTKTVVVLPIGIGELGKDTPVNWTTAVERKKNGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   +  +  A  +  P                                       G
Sbjct: 151 WT-PTKAMHAEYAARGKSIPAVF----------------------------------PAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL  + P  
Sbjct: 176 PDNPMGLYALYIDRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLFDNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|240168399|ref|ZP_04747058.1| hydrolase [Mycobacterium kansasii ATCC 12478]
          Length = 406

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD                FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRAALAALGMLDNPDEDLITGRHIALEVFDAELDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 13/90 (14%)

Query: 87  DILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFD 135
            I+    +  L      LG                V  L+ RL   G    +  +   F 
Sbjct: 73  GIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLVDGYFG 130

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +A+  +Q  +GL P G+    TL ++
Sbjct: 131 LQTHNALMSYQREYGLAPDGICGPETLRSL 160


>gi|17230237|ref|NP_486785.1| hypothetical protein alr2745 [Nostoc sp. PCC 7120]
 gi|17131838|dbj|BAB74444.1| alr2745 [Nostoc sp. PCC 7120]
          Length = 305

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P       AQ    I +  +     GWP      L +G  +  V +L++RL   G L
Sbjct: 208 SSTPRFGPTPSAQRISGIQYTSE-----GWPI-----LRVGMKNSEVTKLQQRLSQLGFL 257

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM--NVPVDLR 172
             S  +   F    E A+K  Q R+G++P G+   +T EA+        R
Sbjct: 258 KGS--VDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEALLRRSSPQRR 305



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA  Q I  +     +    L +G+    V  L+  L + G       +   ++    +
Sbjct: 46  AIATPQQIAQQ---VVINRPTLKIGSQGERVSELQAALRLLGFYS--GAIDGVYNENTAN 100

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           AV  F+   GL P G+VD++T + +   
Sbjct: 101 AVSGFKQAAGLTPDGIVDAATWQRLFPS 128


>gi|190890520|ref|YP_001977062.1| hypothetical protein RHECIAT_CH0000899 [Rhizobium etli CIAT 652]
 gi|190695799|gb|ACE89884.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 249

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 62/204 (30%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +      T+ A+N  +      ++   +      + +     ++++     
Sbjct: 68  FQRRI-IRQAPQPAPQTVSAINPGIPSIRHPIEPQFLPQMVDYDTQEKPGTIVIDTNNRF 126

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V +G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 127 LYLVMDGGKARRYGVGVGKPGFE-WAGAHKITRKQEWPDWTPPSEMISRE---------- 175

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 176 -AAKGHY------------------------LPARMDGGPENPLGARAMYLG-STLYRIH 209

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 210 GTNAPWSIGS---AVSSGCIRLRN 230


>gi|260424725|ref|ZP_05778983.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
 gi|260402963|gb|EEW96510.1| endopeptidase, cell wall lytic activity [Dialister invisus DSM
           15470]
          Length = 246

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              LG+S  +V+ L+ RL  +G L  +      F+    SAVK FQ +H LD  G+V   
Sbjct: 25  SYSLGDSGDAVKDLQRRLTQAGCLVRA---DGRFNETTVSAVKKFQKKHNLDVDGVVGPV 81

Query: 161 TLEAMN 166
           T +A+ 
Sbjct: 82  TYKALT 87


>gi|218510941|ref|ZP_03508819.1| hypothetical protein RetlB5_28197 [Rhizobium etli Brasil 5]
          Length = 249

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 62/204 (30%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +      T+ A+N  +      ++   +      + +     ++++     
Sbjct: 68  FQRRI-IRQAPQPAPQTVSAINPGIPSIRHPIEPQFLPQMVDYDTQEKPGTIVIDTNNRF 126

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V +G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 127 LYLVMDGGKARRYGVGVGKPGFE-WAGAHKITRKQEWPDWTPPSEMISRE---------- 175

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 176 -AAKGHY------------------------LPARMDGGPENPLGARAMYLG-STLYRIH 209

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 210 GTNAPWSIGS---AVSSGCIRLRN 230


>gi|86159333|ref|YP_466118.1| ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775844|gb|ABC82681.1| ErfK/YbiS/YcfS/YnhG [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 284

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 59/203 (29%), Gaps = 52/203 (25%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVI 220
           L+A   P         + ++    +L        V+VN+    L  +  G    L   V 
Sbjct: 61  LDAFVPPPGE------LAILPTAWILPSAAEEGTVVVNLSEMRLYYLPAGPGPLLTFPVG 114

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V      TP+    + + + +P W    +I ++D                          
Sbjct: 115 VAVEAGATPLGVLTVEQKLVSPSWYPTPAIRRED-------------------------- 148

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P       PG  N + S  +   +     +H T  P       R  +
Sbjct: 149 -------------PELPAAVPPGPDNPLGSHALRLSAP-TLLIHGTNRPYGVG---RRVS 191

Query: 341 SGCVRV--RNIIDLDVWLLKDTP 361
            GC+R+   +I  L   +   TP
Sbjct: 192 HGCIRLYPEDIPRLHRAVRLGTP 214


>gi|302388464|ref|YP_003824286.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
 gi|302199092|gb|ADL06663.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
          Length = 510

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L+ERL+  G +D  +     F    E+AVK +Q ++GL   G+V   T
Sbjct: 86  LRNGVEHPVVASLQERLMDLGFMDNDEPTH-YFGNVTEAAVKTYQRQNGLVQDGIVGPET 144

Query: 162 LEAMNVPVDL 171
           L ++  P   
Sbjct: 145 LNSIMSPSAK 154



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 29/154 (18%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIP---------I 69
           + + + +   V   ++      +++  F       ++   V                  I
Sbjct: 80  NPIPEYLRNGVEHPVVASLQERLMDLGFMDNDEPTHYFGNVTEAAVKTYQRQNGLVQDGI 139

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +  ET+       A Y  +                G     + R++ RL   G L  +  
Sbjct: 140 VGPETLNSIMSPSAKYYAVSK--------------GVEGEDISRIQSRLYELGYLASAGQ 185

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +S +F    E+AVK  Q  +GL+  G V   T+ 
Sbjct: 186 VSGSFGDETEAAVKKLQEVNGLNIDGKVGRQTIN 219



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 42/151 (27%), Gaps = 17/151 (11%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIPIISK-- 72
           L     +    +      +++  S   +    +     D       +         +   
Sbjct: 220 LLYSEEIKPNFLAYGEKSDVVLTSQQRLKELGYLITAPDGAYGDDTVTAVKQFQSRNDLV 279

Query: 73  -ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +        I          G        L LG    SV R+++ L   G L  S    
Sbjct: 280 VDGYLGPSTRITLMSAEAQPNG--------LTLGEQGDSVTRIQQLLNKYGYLASSNVT- 330

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             +    E AVK FQ  +GL   G V   T+
Sbjct: 331 GYYGEVTEKAVKAFQSNNGLTADGSVGQLTM 361


>gi|312897678|ref|ZP_07757095.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359]
 gi|310621311|gb|EFQ04854.1| ErfK/YbiS/YcfS/YnhG [Megasphaera micronuciformis F0359]
          Length = 355

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 44/161 (27%), Gaps = 53/161 (32%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
             +LVN  +  L      +      V VG+    TP  + R+                  
Sbjct: 73  DRILVNTASRILTLYRGKEKAAMYPVGVGKASTPTPSGYYRVETK--------------- 117

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                     EV  E +D    E      R   G  N +    I
Sbjct: 118 --------------------------EVNPEWIDPEDTEN-----RIASGPGNPLGYRWI 146

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
            F        H T  P        + ++GCVR+  +++ DL
Sbjct: 147 GFSGTYGI--HGTNSPESVG---GYVSNGCVRMREQDVEDL 182


>gi|304395769|ref|ZP_07377652.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
 gi|304357063|gb|EFM21427.1| ErfK/YbiS/YcfS/YnhG family protein [Pantoea sp. aB]
          Length = 379

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 90  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPISWTTAVERKKDGPT 149

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   +  D                                   +            G
Sbjct: 150 WT-PTKGMHAD----------------------------------YAARGETLPAVFPAG 174

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL ++ P  
Sbjct: 175 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLYQNVPVG 227

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R        +  V+   +  V++   +
Sbjct: 228 TRVQFVDQPVKATVEPDGSRYVEVHNPL 255


>gi|75911127|ref|YP_325423.1| ErfK/YbiS/YcfS/YnhG protein [Anabaena variabilis ATCC 29413]
 gi|75704852|gb|ABA24528.1| ErfK/YbiS/YcfS/YnhG [Anabaena variabilis ATCC 29413]
          Length = 272

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 55/214 (25%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             + ++   + +  ++    ++R  Q    R     + +   + V+V++           
Sbjct: 105 KKTQLLTPESRKNADLSDQSQLRLSQPAAHRKTS-NKLENAKKEVVVDLSDRRTYVYSGD 163

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
            V     + VG+   +TP     ++ +  +P W  P +                      
Sbjct: 164 VVIASYPIAVGKRGWETPTGTFNVSHMEHDPIWRHPITGK-------------------- 203

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTYMHDTPEP 329
                                          G  + +    I F+S  RN    H TP+ 
Sbjct: 204 ---------------------------VFPAGVDSPLGERWIGFWSDGRNKIGFHGTPDT 236

Query: 330 ILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            L        + GC+R+RN  +  L   +   TP
Sbjct: 237 HLLGT---AISHGCLRMRNSDVRLLYDQVEVGTP 267


>gi|302519494|ref|ZP_07271836.1| lipoprotein [Streptomyces sp. SPB78]
 gi|318081632|ref|ZP_07988946.1| hypothetical protein SSA3_34132 [Streptomyces sp. SA3_actF]
 gi|302428389|gb|EFL00205.1| lipoprotein [Streptomyces sp. SPB78]
          Length = 196

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 4/136 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVD 170
            L+ RL   G           F      A+  FQ   GL  SG++D++T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQPT--GFFGDVTAQALAAFQRDRGLGASGVLDAATWARLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            +        +   +   + +  R + V+  + +L  + +G+V     V  G     T  
Sbjct: 61  TKAALYPETTLPPTRPDPRCLTGRALCVSKKSRTLAWMVDGRVVSVMDVRFGSAYTPTRD 120

Query: 231 LHSRINRIMFNPYWVI 246
              ++     +    I
Sbjct: 121 GTFKVYWKSRDHVSTI 136


>gi|229180430|ref|ZP_04307773.1| hypothetical protein bcere0005_37750 [Bacillus cereus 172560W]
 gi|228603177|gb|EEK60655.1| hypothetical protein bcere0005_37750 [Bacillus cereus 172560W]
          Length = 186

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP  +  +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGNFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|75910509|ref|YP_324805.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704234|gb|ABA23910.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 305

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 12/101 (11%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P  +    AQ    I +  +     GWP      L +G  +  V +L++RL   G L
Sbjct: 208 SSTPRFAPTPSAQRISGIQYTSE-----GWPI-----LRVGMKNSEVTKLQQRLSQLGFL 257

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               G+   F    E A+K  Q R+G++P G+   +T EA+
Sbjct: 258 K--GGVDGYFGVQTEEALKAAQRRYGIEPDGVAGGATWEAL 296



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 5/88 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA  Q I  +     +    L +G+    V  L+  L + G       +   ++    +
Sbjct: 46  AIATPQQIAQQ---VVINRPTLKIGSQGERVSELQAALRLLGFYS--GAIDGVYNENTAN 100

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           AV  F+   GL P G+VD+ T + +   
Sbjct: 101 AVSGFKQAAGLTPDGIVDAITWQRLFPS 128


>gi|330470820|ref|YP_004408563.1| cell wall hydrolase/autolysin [Verrucosispora maris AB-18-032]
 gi|328813791|gb|AEB47963.1| cell wall hydrolase/autolysin [Verrucosispora maris AB-18-032]
          Length = 388

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 1/69 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           RP+  G+   +V  +R  L     L   +      FD   E AV+ FQ   GL   G V 
Sbjct: 2   RPIRSGDRGPAVAEIRAVLTSLDLLSKATGPYDDEFDTATERAVRAFQQSRGLSVDGRVG 61

Query: 159 SSTLEAMNV 167
           + T  A++ 
Sbjct: 62  AETWRALDA 70


>gi|284053377|ref|ZP_06383587.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 492

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V +++ RL   G L  +      F    ++AV  FQ  + L   G+V  +
Sbjct: 52  VLAIGDFGPEVTQIQNRLRELGYLSANAT--GYFGEETQNAVIQFQRDNRLVQDGIVGPN 109

Query: 161 TLEAMNVPVD 170
           T+ A+     
Sbjct: 110 TVVALIATNQ 119



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 28/166 (16%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD----------MGIDSDIPI 69
           + M  S     +        +      +    +   +                   +   
Sbjct: 292 VSMTQSNPSSILVLGSRGSDVIALQQRLQQLGYYTGMIDGVFGESTRVAVVRFQRDNAIT 351

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRP--------------LHLGNSSVSVQRLR 115
            + +    T+  +A  +    R   P +P  P              + +GN+   V+R++
Sbjct: 352 QTGQVGPTTQFHLA--RATTQRPIIPVVPAGPGSVVRPVATNPNTYITIGNAGEDVRRIQ 409

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            RL   G    +  ++  FD   ++AV  FQ  + +  +G+V  +T
Sbjct: 410 RRLRELGFY--NGPINGFFDGQTQNAVIQFQQAYNITTTGIVGPTT 453



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 85/285 (29%), Gaps = 52/285 (18%)

Query: 91  RGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             G   L     L  G+    V  ++  L   G       ++  +D     AV+ FQM +
Sbjct: 201 NRGTGSLAGNVSLGPGSFGPIVGLVQRELQRLGFFP--GQITNFYDEVTFQAVRNFQMVN 258

Query: 150 GLDPSGMVDSSTL-----EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           GL P+G +  +T      + M     +      V++ +        +G R   V      
Sbjct: 259 GLTPTGFIGPTTQSLLASQQMLGNSGITSNSTNVSMTQSNPSSILVLGSRGSDVIALQQR 318

Query: 205 L------EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           L        + +G  G  + V V R  R   I  +   ++     + + R+  Q+ ++  
Sbjct: 319 LQQLGYYTGMIDGVFGESTRVAVVRFQRDNAITQTG--QVGPTTQFHLARATTQRPIIP- 375

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP-----EPPNFIFRQD--------PGKI 305
                         +    G  V     + N+         +    Q          G I
Sbjct: 376 -------------VVPAGPGSVVRPVATNPNTYITIGNAGEDVRRIQRRLRELGFYNGPI 422

Query: 306 NAM--AST---KIEFYSRNNT---YMHD-TPEPILFNNVVRFETS 341
           N      T    I+F    N     +   T E  LFN   R    
Sbjct: 423 NGFFDGQTQNAVIQFQQAYNITTTGIVGPTTETYLFNVTRRSFGH 467



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S   V  L+ RL   G  + +      F     +AV  FQ  + +  +G+V   T
Sbjct: 139 LGLGDSGPGVTNLQNRLRNLGFFNNNST--GYFGPITRNAVIRFQQANSIAATGLVTEDT 196

Query: 162 LE 163
           L 
Sbjct: 197 LA 198


>gi|145221431|ref|YP_001132109.1| peptidoglycan binding domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315446817|ref|YP_004079696.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium sp. Spyr1]
 gi|145213917|gb|ABP43321.1| Peptidoglycan-binding domain 1 protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315265120|gb|ADU01862.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium sp. Spyr1]
          Length = 395

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 64/215 (29%), Gaps = 26/215 (12%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHGL 151
             L  G+   +V  +R  L   G                +  FD  ++ AV+ FQ   GL
Sbjct: 2   SSLRRGDRGGAVAEIRAALAALGMATDPDEDLSTGKHVAADLFDDELDHAVRAFQQHRGL 61

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-- 209
              G+V  +T  A+      R+    +N      +    +      +         V+  
Sbjct: 62  LVDGIVGEATYRALKE-ASYRLGARTLNHQFGAPMYGDDVATLQARLQDLGFYTGLVDGH 120

Query: 210 -----NGKVGLRSTVIVGRVDRQ-TPILHSRINRIMFNPYWVIPRSIIQKDMM------- 256
                +  +           D    P     +  +        P +I +++++       
Sbjct: 121 FGLQTHNALSSYQREYGLYPDGICGPETLRSLYFLGARVTGGSPHAIREEELVRSSGPRL 180

Query: 257 --ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
               +  DP     ++  +++     +   ++ W+
Sbjct: 181 SGKRIIVDPGRGGSDHGVIVNGPDGPISEADILWD 215


>gi|17229182|ref|NP_485730.1| cell wall-binding protein [Nostoc sp. PCC 7120]
 gi|17135510|dbj|BAB78056.1| cell wall-binding protein [Nostoc sp. PCC 7120]
          Length = 424

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV+ L+++L  +G       ++  +D   E AV+ FQ   GL   G+V +S
Sbjct: 65  ALERGDQGPSVRNLQQKLQQAGFY--QAPVTQVYDFSTEEAVRRFQAAAGLPVDGVVGAS 122

Query: 161 TL----EAMNVPVDLRIRQLQVNLMRIK 184
           TL    +  + PV  +++Q        +
Sbjct: 123 TLEKLDQWRSSPVANQVQQYSTPSTPTR 150



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L++RL ++G    +      F    E AVK FQ  + LD  G+V  +T
Sbjct: 216 LVKGDEGEAVRSLQQRLRVAGFYYGNAT--GVFGPITEEAVKRFQTAYRLDVDGIVGPAT 273

Query: 162 LEAMN 166
           +  + 
Sbjct: 274 IRRLP 278



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G+   +V+ L+E+LI +G L      +  F  Y   AVK FQ  + L  SG+  
Sbjct: 296 KDKLTVGDRGEAVRVLQEQLIQAGYL--QGQPNGYFGPYTAEAVKRFQAANYLAASGIAG 353

Query: 159 SSTLEAMNVP 168
            +T   ++  
Sbjct: 354 PTTRAKLHSS 363


>gi|291451685|ref|ZP_06591075.1| lipoprotein [Streptomyces albus J1074]
 gi|291354634|gb|EFE81536.1| lipoprotein [Streptomyces albus J1074]
          Length = 280

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 4/150 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G +S  V+ L+ RL   G    S      +      AV  +Q +  L  +G  
Sbjct: 72  PAVLMRPGQTSEQVRELQARLASLGLFGRSPT--GFYGDVTSEAVSAYQRKGALPVTGTT 129

Query: 158 DSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGL 215
           D+ T + +           L           +++ +  R + ++  + SL  + +GKV  
Sbjct: 130 DAVTWDRLRAGTPRPTQDDLHPPTTLPLSKPDKRCLTGRVLCISKQSRSLAWMVDGKVRA 189

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
              V  G     T     ++     + +  
Sbjct: 190 AMDVRFGSQYTPTRDGAFKVYWKSRDHHST 219


>gi|239979825|ref|ZP_04702349.1| hypothetical protein SalbJ_10322 [Streptomyces albus J1074]
          Length = 288

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 4/150 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G +S  V+ L+ RL   G    S      +      AV  +Q +  L  +G  
Sbjct: 80  PAVLMRPGQTSEQVRELQARLASLGLFGRSPT--GFYGDVTSEAVSAYQRKGALPVTGTT 137

Query: 158 DSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGL 215
           D+ T + +           L           +++ +  R + ++  + SL  + +GKV  
Sbjct: 138 DAVTWDRLRAGTPRPTQDDLHPPTTLPLSKPDKRCLTGRVLCISKQSRSLAWMVDGKVRA 197

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
              V  G     T     ++     + +  
Sbjct: 198 AMDVRFGSQYTPTRDGAFKVYWKSRDHHST 227


>gi|228954436|ref|ZP_04116461.1| hypothetical protein bthur0006_38060 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228805093|gb|EEM51687.1| hypothetical protein bthur0006_38060 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 186

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|315651948|ref|ZP_07904950.1| endopeptidase [Eubacterium saburreum DSM 3986]
 gi|315485777|gb|EFU76157.1| endopeptidase [Eubacterium saburreum DSM 3986]
          Length = 533

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 67/220 (30%), Gaps = 14/220 (6%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            + L +     H +     + E    I N  ++         I       ++E   + ++
Sbjct: 161 TLPLLMDANAKHYAAKLGDVGEDVKRIQNRLYELGYLASADMITGTYDERTQEAALKLQQ 220

Query: 81  AIAFYQDILSRGG-------WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            I    +    G          E+    L LG  S  VQ ++ RL   G L  S      
Sbjct: 221 -INQLSEDGKVGSETMNLLYSDEIKANTLSLGEHSEVVQAIQNRLFQLGYLTSSP--DGT 277

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV---NLMRIKKLLEQK 190
           +    E AV+ FQ ++ L   G +  ST  A+ +  + +   L +   N    +      
Sbjct: 278 YGNDTELAVRTFQSKNDLVVDGYLGPST-RAVILSKEAKANGLVLGDQNEQVSRLQALLA 336

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
                   N      E  E+     +S   +    R    
Sbjct: 337 KAGYLNEANATGYFGEITESALKRFQSNNGLEADGRAGAQ 376



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 9/135 (6%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
            V    I      ++   F       D   +    +     +    +       I+    
Sbjct: 106 GVQHSYIARVQSRLMELGF----MDNDEPTNYFGEVTKAAVMIFQRQNGLAQDGIIGPST 161

Query: 94  WPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            P L           LG+    V+R++ RL   G L  +  ++  +D   + A    Q  
Sbjct: 162 LPLLMDANAKHYAAKLGDVGEDVKRIQNRLYELGYLASADMITGTYDERTQEAALKLQQI 221

Query: 149 HGLDPSGMVDSSTLE 163
           + L   G V S T+ 
Sbjct: 222 NQLSEDGKVGSETMN 236



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 53/158 (33%), Gaps = 19/158 (12%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGI----DSDIPII 70
           L     +    +      E++    + +    +     D               S   ++
Sbjct: 237 LLYSDEIKANTLSLGEHSEVVQAIQNRLFQLGYLTSSPDGTYGNDTELAVRTFQSKNDLV 296

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
               +  + +A+   ++  + G         L LG+ +  V RL+  L  +G L      
Sbjct: 297 VDGYLGPSTRAVILSKEAKANG---------LVLGDQNEQVSRLQALLAKAGYL-NEANA 346

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  F    ESA+K FQ  +GL+  G   + T   +N  
Sbjct: 347 TGYFGEITESALKRFQSNNGLEADGRAGAQTFAKLNTD 384


>gi|167584280|ref|ZP_02376668.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           ubonensis Bu]
          Length = 268

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 48/151 (31%), Gaps = 17/151 (11%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V  L+ RLI +G    +  ++  +D   ESAVK  Q   GL   G+    TL
Sbjct: 5   RLGDQGDDVGLLQRRLIRAGY---ALDVTHVYDEATESAVKAVQTEAGLVVDGIAGPKTL 61

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A+                    L +  +      + +P A + AV        +     
Sbjct: 62  AAIATGRRDPKH-----------LADADIVKAADTLGVPVACVRAVN---EVESTGSGFL 107

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
              R   +    +         + P  I  K
Sbjct: 108 SDGRPKILFERHVFWKRLEARGINPAPIAAK 138


>gi|30022230|ref|NP_833861.1| protein erfK/srfK precursor [Bacillus cereus ATCC 14579]
 gi|218230902|ref|YP_002368953.1| hypothetical protein BCB4264_A4260 [Bacillus cereus B4264]
 gi|228922900|ref|ZP_04086197.1| hypothetical protein bthur0011_38840 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228960418|ref|ZP_04122070.1| hypothetical protein bthur0005_38850 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229071657|ref|ZP_04204874.1| hypothetical protein bcere0025_38250 [Bacillus cereus F65185]
 gi|229111624|ref|ZP_04241175.1| hypothetical protein bcere0018_38690 [Bacillus cereus Rock1-15]
 gi|229129430|ref|ZP_04258401.1| hypothetical protein bcere0015_38730 [Bacillus cereus BDRD-Cer4]
 gi|229146724|ref|ZP_04275090.1| hypothetical protein bcere0012_38650 [Bacillus cereus BDRD-ST24]
 gi|296504640|ref|YP_003666340.1| protein ErfK/SrfK precursor [Bacillus thuringiensis BMB171]
 gi|29897787|gb|AAP11062.1| Protein erfK/srfK precursor [Bacillus cereus ATCC 14579]
 gi|218158859|gb|ACK58851.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|228636744|gb|EEK93208.1| hypothetical protein bcere0012_38650 [Bacillus cereus BDRD-ST24]
 gi|228654035|gb|EEL09902.1| hypothetical protein bcere0015_38730 [Bacillus cereus BDRD-Cer4]
 gi|228672006|gb|EEL27299.1| hypothetical protein bcere0018_38690 [Bacillus cereus Rock1-15]
 gi|228711452|gb|EEL63410.1| hypothetical protein bcere0025_38250 [Bacillus cereus F65185]
 gi|228799279|gb|EEM46244.1| hypothetical protein bthur0005_38850 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228836756|gb|EEM82100.1| hypothetical protein bthur0011_38840 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|296325692|gb|ADH08620.1| protein erfK/srfK precursor [Bacillus thuringiensis BMB171]
          Length = 186

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|226536686|gb|ACO72580.1| hypothetical cell wall lytic activity protein [Geobacillus
           stearothermophilus]
          Length = 450

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 57/193 (29%), Gaps = 15/193 (7%)

Query: 27  VEKPIHASVLDEIINESYHSIVND------RFDNFLARVDMGIDSDIPIIS--KETIAQT 78
               +        +++    +         +   +   V           +    T    
Sbjct: 95  SNDTLAIGSRGAAVSDLQRRLKQLGYFRYPQITGYYGAVTADAVKQFQRANGLPATGRAD 154

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
              +   +   +    P      L +G+    V++L+++L   G    S  ++  +    
Sbjct: 155 RATLERLKQKATSQ--PATLSDALTIGSRGDDVRKLQQQLKQLGYFTYS-DITGYYGVLT 211

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK---LLEQKMGLRY 195
             A++ FQ  +GL  +G VD+ T+  +   V  +       + R +    L    +G   
Sbjct: 212 ADAIRRFQRDNGLPVTGAVDNQTVARLASAVKAKTTSPA-PIERERLAVRLSIGALGDDV 270

Query: 196 VLVNIPAASLEAV 208
             +      L   
Sbjct: 271 KRIQTKLKELGYF 283



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G     V+R++ +L   G       ++  +      AV+ FQ    L  +G+VD
Sbjct: 258 AVRLSIGALGDDVKRIQTKLKELGYF--WTDITGYYGTATADAVRRFQQAAQLPATGIVD 315

Query: 159 SSTLEA-MNVPVDLRIRQLQV 178
             T E  +      ++  +++
Sbjct: 316 GETYERLIGQAPAAKLDVIEL 336


>gi|148242242|ref|YP_001227399.1| hypothetical protein SynRCC307_1143 [Synechococcus sp. RCC307]
 gi|147850552|emb|CAK28046.1| Uncharacterized conserved secreted protein [Synechococcus sp.
           RCC307]
          Length = 194

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 64/212 (30%), Gaps = 70/212 (33%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           D  +R L++ L  +   +  + G R+++++     L  +E G++  R  V VG    +TP
Sbjct: 28  DHPLRPLELQLAELPSNVVGRAG-RHLVLHRSRRQLLLIEQGQLVSRYPVAVGMAGWETP 86

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
               R+   +  P W  P++                       ++  +            
Sbjct: 87  AGTFRVLNKVSEPSWAHPQTG---------------------EVVTGED----------- 114

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRN------------------NTYMHDTPEPIL 331
                           N + S  I FY                         H TP    
Sbjct: 115 --------------PKNPLGSRWIGFYKDCVGRKGFDGEQMLDIKGCTTVGFHGTPHRWT 160

Query: 332 FNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             +     + GCVR+   +I DL   +   TP
Sbjct: 161 IGH---AVSHGCVRLFDEDIRDLFDRVRTGTP 189


>gi|154497714|ref|ZP_02036092.1| hypothetical protein BACCAP_01690 [Bacteroides capillosus ATCC
           29799]
 gi|150273212|gb|EDN00357.1| hypothetical protein BACCAP_01690 [Bacteroides capillosus ATCC
           29799]
          Length = 224

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                 G++  +V+ ++ +L   G       +   +    E AVK FQ ++GL   G+  
Sbjct: 30  AAVYRQGSTGDAVRTIQTKLSNWGYFS--GAIDGIYGPKTEEAVKYFQRKNGLTADGVAG 87

Query: 159 SSTLEAMNVP 168
            +TL A+ + 
Sbjct: 88  PATLRALGMS 97


>gi|120406998|ref|YP_956827.1| peptidoglycan binding domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119959816|gb|ABM16821.1| Peptidoglycan-binding domain 1 protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 395

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 9/119 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHGL 151
             L  G+   +V  +R  L   G +D             +  FD  ++ AV+ FQ   GL
Sbjct: 2   SSLRRGDRGGAVAEIRAALSALGMIDSPDEDLTTGKHVAADMFDDDLDHAVRAFQQHRGL 61

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
              G+V  +T  A+      R+    +N      +    +      +         V+ 
Sbjct: 62  LVDGIVGEATYRALKE-ASYRLGARTLNHQFGAPMYGDDVATLQSRLQDLGFYTGLVDG 119



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 14/99 (14%)

Query: 69  IISKETIAQTEKAIAFY--QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           I+ + T    ++A      + +  + G P               V  L+ RL   G    
Sbjct: 66  IVGEATYRALKEASYRLGARTLNHQFGAP----------MYGDDVATLQSRLQDLGFY-- 113

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  +   F     +A+  +Q  +GL P G+    TL ++
Sbjct: 114 TGLVDGHFGLQTHNALSSYQREYGLYPDGICGPETLRSL 152


>gi|328954133|ref|YP_004371467.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328454457|gb|AEB10286.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 300

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 58/182 (31%), Gaps = 52/182 (28%)

Query: 184 KKLLEQKMGLRYVLVNIPAA--SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           + +L        +++N+      L   + G+V     + +G  D +TP    RI+    N
Sbjct: 97  RWVLPPAPAGEGIVINVAELRDYLFFPKTGQV-RTYPIGIGVFDYKTPFGRFRISSKAEN 155

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W IP  +  K  MA +                                          
Sbjct: 156 PGWRIPAGLQAKYGMAYM-----------------------------------------P 174

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
           PG+ N + +  +         MH T  P  F    R  + GC+R    +I +L   +   
Sbjct: 175 PGEENPVGTHWLGLTH---YGMHGTHAP--FGVG-RLVSHGCIRHYNEDIKELFELVPVG 228

Query: 360 TP 361
           TP
Sbjct: 229 TP 230


>gi|284043195|ref|YP_003393535.1| glycoside hydrolase family 24 [Conexibacter woesei DSM 14684]
 gi|283947416|gb|ADB50160.1| glycoside hydrolase family 24 [Conexibacter woesei DSM 14684]
          Length = 391

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S   + +  + +A  + +L R     L  RPL  G  +  V+ +R  L ++G +D  +  
Sbjct: 112 SATALQRVARRLARPRTVLER-----LRARPLRRGAKTPDVKTVRTYLELAGLVDRDRTR 166

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
              +   +  AV+ FQ R GL   G+V   T  A+      R+
Sbjct: 167 RDEYGEPLALAVRAFQRRVGLTEDGLVGPKTFAALRRRYGWRV 209


>gi|222106794|ref|YP_002547585.1| hypothetical protein Avi_5811 [Agrobacterium vitis S4]
 gi|221737973|gb|ACM38869.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 223

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 44/195 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +  V   +  R++     R    L+       V+++     L  VE     +R  V VG
Sbjct: 30  ASSVVTPQMMKREVPDKFKRRLVRLKTDEAPGTVIIDTNNKFLYLVEGNNRAIRYGVGVG 89

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R           I R +  P W  P  +  ++            +  +I           
Sbjct: 90  REG-FGWSGVVNIGRKVEWPSWRPPEEMRVRE-----------ARRGHI----------- 126

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFE 339
                            Q+ G  N + +  +     +R+  + +H T +P          
Sbjct: 127 -------------LPVVQEGGPDNPLGARAMYLYKGNRDTIFRIHGTNQPWSIG---LNL 170

Query: 340 TSGCVRVRN--IIDL 352
           +SGC+R+ N  + DL
Sbjct: 171 SSGCIRMNNKDVEDL 185


>gi|171316535|ref|ZP_02905752.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
 gi|171098369|gb|EDT43174.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
          Length = 266

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +LI +G           + +   +AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGADVSYLQRQLIAAG---ARLDTDAIYGSATRNAVVAFQATHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMR 182
            T   ++            +L R
Sbjct: 60  KTWSTLSAGRRDPRHLTDADLQR 82


>gi|254423629|ref|ZP_05037347.1| ErfK/YbiS/YcfS/YnhG superfamily [Synechococcus sp. PCC 7335]
 gi|196191118|gb|EDX86082.1| ErfK/YbiS/YcfS/YnhG superfamily [Synechococcus sp. PCC 7335]
          Length = 108

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 52/135 (38%)

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
              V +GR   +TP     +   + +P W  P   I  +++                   
Sbjct: 4   SYPVAIGRAGWETPTGKFEVFHQVTDPGWTNP---ITSEVVP------------------ 42

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTYMHDTPEPILFN 333
                                     PG  N +    I F+    N+   H TP      
Sbjct: 43  --------------------------PGPYNPLGDRWIAFWTDGTNSIGFHGTPNRESVG 76

Query: 334 NVVRFETSGCVRVRN 348
                 + GCVR+ N
Sbjct: 77  T---AASHGCVRMYN 88


>gi|271499268|ref|YP_003332293.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
 gi|270342823|gb|ACZ75588.1| ErfK/YbiS/YcfS/YnhG family protein [Dickeya dadantii Ech586]
          Length = 362

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 81/280 (28%), Gaps = 67/280 (23%)

Query: 124 LDPSKGLSVAFDAYVE--------SAVKLF--QMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
                  S      ++         A++ F  Q + GL          L   N  +D+ +
Sbjct: 27  YPLPAPNSRLVGENIQVTIPSGSTDALEHFAAQYQMGLSN--------LLEANPGIDVYL 78

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-L 231
            +    +   ++L+        +++N     L     G K  +   + +G++ + TPI  
Sbjct: 79  PKPGTTMTVPQQLILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGQLGKDTPINW 138

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            + + R    P W    ++  +           Y                          
Sbjct: 139 VTSVQRKKERPTWTPTAAMHAE-----------YAARGEY-------------------- 167

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
                      G  N M    +          H T     F   +R  + GCVR+R+   
Sbjct: 168 ----LPQVYPAGPDNPMGLYALYIGKLYAI--HGTNAN--FGIGLR-VSHGCVRLRDKD- 217

Query: 352 LDVWLLKDTPTWSR-----YHIEEVVKTRKTTPVKLATEV 386
              +L +  P  +R       ++  V+   +  V++   +
Sbjct: 218 -IKYLFEHVPVGTRVQFINEPVKATVEPDGSRYVEVHNPL 256


>gi|296167152|ref|ZP_06849559.1| N-acetylmuramoyl-l-alanine amidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
 gi|295897474|gb|EFG77073.1| N-acetylmuramoyl-l-alanine amidase [Mycobacterium parascrofulaceum
           ATCC BAA-614]
          Length = 405

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEVRATLAALGLLDIPEDDLATGRHVSPEVFDAELDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 44/155 (28%), Gaps = 18/155 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
               +        + E   ++      +             P +    + Q  +A   ++
Sbjct: 8   YGDALRCGDRSAAVTEVRATLAALGLLDIPEDDLATGRHVSPEVFDAELDQAVRAFQQHR 67

Query: 87  DILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGL 130
            +L  G      +  L      LG                V  L+ RL   G    +  +
Sbjct: 68  GLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLV 125

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F     +A+  +Q  +GL   G+    TL ++
Sbjct: 126 DGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|255659253|ref|ZP_05404662.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
 gi|260848708|gb|EEX68715.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
          Length = 217

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W  +       +G+    V  ++ +L   G          A+      AVK FQM  G++
Sbjct: 14  WFSVAGASAFRVGDQGSDVAEIQGQLANLGY---DVTADGAYGPATVEAVKSFQMTQGIN 70

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             G+V  ST  A+       +     ++ R
Sbjct: 71  ADGLVGPSTYAALLGKSMPAVSSTTNSIAR 100


>gi|219670721|ref|YP_002461156.1| peptidoglycan-binding protein [Desulfitobacterium hafniense DCB-2]
 gi|219540981|gb|ACL22720.1| Peptidoglycan-binding domain 1 protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 433

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++ RL   G +     +   F    E+AV  FQ   GL+P G+V   T
Sbjct: 4   LRRGSRGNDVAEVQVRLSELGYIP--GPIDGIFGPKTEAAVIRFQKDRGLNPDGIVGPLT 61

Query: 162 LEAMNVP 168
            +A+  P
Sbjct: 62  YQALFQP 68


>gi|119488463|ref|ZP_01621636.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
 gi|119455274|gb|EAW36414.1| hypothetical protein L8106_23835 [Lyngbya sp. PCC 8106]
          Length = 238

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G    +    L  G     V  L++RL I G       +   F +  E AV+ FQ   GL
Sbjct: 73  GSSQPIRRYTLEPGTRGTQVTGLQQRLQIHGF--DPGRVDSVFGSRTEQAVRAFQQARGL 130

Query: 152 DPSGMVDSSTLEAMNVPVDLRIR 174
           + +G+VD  T + +         
Sbjct: 131 EVNGIVDRGTWKLLETTPRPVAT 153



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 32/162 (19%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI-AFYQDI 88
            +        +      +    FD         +DS     +++ +   ++A       I
Sbjct: 82  TLEPGTRGTQVTGLQQRLQIHGFD------PGRVDSVFGSRTEQAVRAFQQARGLEVNGI 135

Query: 89  LSRGGWP-----------------------ELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
           + RG W                         +    L  G     V+ L+ RL I G   
Sbjct: 136 VDRGTWKLLETTPRPVATAPRPVETAPRPVAVAQEVLTKGTKGSKVRTLQTRLEIKGF-- 193

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               +   F +  ++AV  +Q   GL+ +G+VD  T  A++ 
Sbjct: 194 DPGPVDGVFGSRTQAAVIAYQQTKGLEVNGVVDEQTWVALSQ 235


>gi|16079450|ref|NP_390274.1| hypothetical protein BSU23940 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310314|ref|ZP_03592161.1| hypothetical protein Bsubs1_13136 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314638|ref|ZP_03596443.1| hypothetical protein BsubsN3_13057 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319561|ref|ZP_03600855.1| hypothetical protein BsubsJ_12978 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323837|ref|ZP_03605131.1| hypothetical protein BsubsS_13107 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321311875|ref|YP_004204162.1| hypothetical protein BSn5_02505 [Bacillus subtilis BSn5]
 gi|1731066|sp|P54539|YQJB_BACSU RecName: Full=Putative L,D-transpeptidase YqjB; Flags: Precursor
 gi|1303953|dbj|BAA12608.1| YqjB [Bacillus subtilis]
 gi|2634828|emb|CAB14325.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|320018149|gb|ADV93135.1| hypothetical protein BSn5_02505 [Bacillus subtilis BSn5]
          Length = 176

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 62/210 (29%), Gaps = 64/210 (30%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV+VN     L  + + KV    +V  G+ D  TP     +     NP     
Sbjct: 21  NPLPGDPYVIVNKRTNELAVILDNKVEGVYSVATGKTDDLTPEGEFSVTVKAENP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  NI                                  N 
Sbjct: 76  -----------------YYRKKNIE----------------------------GGSPDNP 90

Query: 308 MASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
           + +  I F ++        +H T           F ++GC+R+ N  D  V L +  P  
Sbjct: 91  LGARWIGFDAKGTDGRIYGIHGTNREESVGK---FVSNGCIRMHN--DEVVHLFQTIPVG 145

Query: 364 SRYHIEEVVKTRKTTPV---KL--ATEVPV 388
           +R  I +  ++ +   +    L    ++P+
Sbjct: 146 TRVLITDDNRSFEEIAIEHKALIKKQDIPI 175


>gi|284044768|ref|YP_003395108.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283948989|gb|ADB51733.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 349

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 67/229 (29%), Gaps = 54/229 (23%)

Query: 135 DAYVESAV-----KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
           DA +  AV        Q    L+    +    +  +  P   R    ++  ++ +   ++
Sbjct: 154 DASLALAVDSVSVNDSQDGSRLENPDKLRKQIVRTLRKPRGERTFAAKIVAVKPETTTDE 213

Query: 190 KMGLRYVLV--NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
                  +V  +    ++     G++    +V VG  +  TP     +  +  +P W +P
Sbjct: 214 VWAANQTVVTVSKSGTTVRVFVRGELSKTYSVAVGSAEYPTPGGQFTVQTMQVDPPWNVP 273

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KIN 306
            S    D+                      G+ +                     G   N
Sbjct: 274 NSEWAGDLA---------------------GQTI-------------------PGGAPNN 293

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            + +  I F        H T +     +     + GCVR+ N  D+   
Sbjct: 294 PLVARWIGFNG--AVGFHGTADGGSIGS---AASHGCVRM-NPADVIDL 336


>gi|89897594|ref|YP_521081.1| hypothetical protein DSY4848 [Desulfitobacterium hafniense Y51]
 gi|89337042|dbj|BAE86637.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 433

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++ RL   G +     +   F    E+AV  FQ   GL+P G+V   T
Sbjct: 4   LRRGSRGNDVAEVQVRLSELGYIP--GPIDGIFGPKTEAAVIRFQKDRGLNPDGIVGPLT 61

Query: 162 LEAMNVP 168
            +A+  P
Sbjct: 62  YQALFQP 68


>gi|319408707|emb|CBI82362.1| putative Peptidoglycan-binding domain 1 protein [Bartonella
           schoenbuchensis R1]
          Length = 395

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 15/149 (10%)

Query: 39  IINESYHSIVNDRFDN--FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE 96
            +     S+ +  F+           +      +     A T+K+      + + G    
Sbjct: 164 KVRGLASSLRDKDFNAIARAYNGSGMVKEYGRRMRNAYCALTKKSAEVSNSVRANG---- 219

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
                L LG     V+ L++RL   G       +   +     SA+  FQ  H L+  G+
Sbjct: 220 -----LRLGCKGYRVEALQKRLNDLGY---PVAIDSDYGPNTRSAIFAFQADHNLEVDGV 271

Query: 157 VDSSTLEAMNV-PVDLRIRQLQVNLMRIK 184
           V + T  A++V    +  R+  V++  ++
Sbjct: 272 VGAKTQAALDVATPMISPRRSGVSMADLR 300


>gi|29829926|ref|NP_824560.1| lipoprotein [Streptomyces avermitilis MA-4680]
 gi|29607036|dbj|BAC71095.1| putative lipoprotein [Streptomyces avermitilis MA-4680]
          Length = 285

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 5/144 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P + L   G+   +V+ L+ RL     L    G +  +D    +AV+ FQ + GL  +G 
Sbjct: 75  PAKVLWSAGDKGTAVRELQARLRQVAWL--FDGPTGTYDDLTVTAVRGFQGKRGLPRTGE 132

Query: 157 VDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T + +        +     +          + M  R + ++  + +L  + +GK  
Sbjct: 133 TDAVTWQRLVRMTHEPTKWELYALGGQPAAAPDPRCMTGRALCISKTSRTLRWMIDGKTV 192

Query: 215 LRSTVIVGRVDRQTPILHSRINRI 238
               V  G     T      +   
Sbjct: 193 STMAVRFGAQYTPTREGVFSVYWK 216


>gi|229061832|ref|ZP_04199163.1| hypothetical protein bcere0026_39090 [Bacillus cereus AH603]
 gi|228717441|gb|EEL69108.1| hypothetical protein bcere0026_39090 [Bacillus cereus AH603]
          Length = 186

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVLK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKHD--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  KT +
Sbjct: 141 DRIPIGTKVSIVKSKKTFQ 159


>gi|28210330|ref|NP_781274.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium tetani
           E88]
 gi|28202767|gb|AAO35211.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium tetani
           E88]
          Length = 423

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+ ++  L   G       +   + +  E+AV+ FQ   GL   G+V  +T
Sbjct: 4   LKLGSRGPRVREVQSILKQMGYY--RGTVDGIYGSQTEAAVRNFQKNMGLIADGIVGENT 61

Query: 162 LEAMNV 167
             A+  
Sbjct: 62  YRALGR 67


>gi|163941899|ref|YP_001646783.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229013361|ref|ZP_04170501.1| hypothetical protein bmyco0001_37750 [Bacillus mycoides DSM 2048]
 gi|229134965|ref|ZP_04263771.1| hypothetical protein bcere0014_38720 [Bacillus cereus BDRD-ST196]
 gi|229168894|ref|ZP_04296611.1| hypothetical protein bcere0007_38470 [Bacillus cereus AH621]
 gi|163864096|gb|ABY45155.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228614486|gb|EEK71594.1| hypothetical protein bcere0007_38470 [Bacillus cereus AH621]
 gi|228648467|gb|EEL04496.1| hypothetical protein bcere0014_38720 [Bacillus cereus BDRD-ST196]
 gi|228747954|gb|EEL97819.1| hypothetical protein bmyco0001_37750 [Bacillus mycoides DSM 2048]
          Length = 186

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDIVLK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKHD--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  KT +
Sbjct: 141 DRIPIGTKVSIVKSKKTFQ 159


>gi|308186133|ref|YP_003930264.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
 gi|308056643|gb|ADO08815.1| Protein erfK/srfK precursor [Pantoea vagans C9-1]
          Length = 370

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G K  +   + +G + + TPI   + + R    P 
Sbjct: 90  LILPDAPREGIVINSAEMRLYYYPKGSKTVVVLPIGIGELGKDTPINWTTAVERKKDGPT 149

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P   +  D                                   +            G
Sbjct: 150 WT-PTKGMHAD----------------------------------YAARGETLPAVFPAG 174

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  WL ++ P  
Sbjct: 175 PDNPMGLYALYIGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KWLYQNVPVG 227

Query: 364 SRYHI-----EEVVKTRKTTPVKLATEV 386
           +R        +  V+   +  V++   +
Sbjct: 228 TRVQFVDQPVKATVEPDGSRYVEVHNPL 255


>gi|229081409|ref|ZP_04213911.1| hypothetical protein bcere0023_40430 [Bacillus cereus Rock4-2]
 gi|228701899|gb|EEL54383.1| hypothetical protein bcere0023_40430 [Bacillus cereus Rock4-2]
          Length = 186

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 58/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP  +  +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKIFPVATGKTNELTPEGNFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  K+ +
Sbjct: 141 DRIPIGTKVWIVKSKKSFQ 159


>gi|225568373|ref|ZP_03777398.1| hypothetical protein CLOHYLEM_04450 [Clostridium hylemonae DSM
           15053]
 gi|225162821|gb|EEG75440.1| hypothetical protein CLOHYLEM_04450 [Clostridium hylemonae DSM
           15053]
          Length = 267

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S    + L+E+LI  G    S G         + AVK +Q  HGL   G+V  +T
Sbjct: 201 LSPGASGGITKLLQEKLISLGYSCGSSGADGILGQDTQRAVKAYQKDHGLAADGIVGPAT 260

Query: 162 LEAM 165
            + +
Sbjct: 261 WKKL 264


>gi|157692082|ref|YP_001486544.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032]
 gi|157680840|gb|ABV61984.1| peptidoglycan binding protein [Bacillus pumilus SAFR-032]
          Length = 165

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 48/153 (31%), Gaps = 11/153 (7%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW-VIPRSIIQKDMMALLRQDPQYLKDNN 270
            +  R+T    +    +      +   +        P +I  +  +++  +         
Sbjct: 16  ALDFRTTTDALKAANPSLQGQEPVQNEVIIIPGLPDPNTIPYRISVSISSKRLVLFS--G 73

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
             +I      +    +   +P    +I  + P       +  +     +   +H T  P 
Sbjct: 74  SELIRSY--PIATGRILNMTPTGSYYIVNRQPNPGGPFGAYWLSLSKVH-YGIHGTNNPS 130

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                    + GC+R+  +N+I+L   +   TP
Sbjct: 131 SIGK---AVSRGCIRMYNQNVIELASIVPNGTP 160


>gi|89099286|ref|ZP_01172164.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911]
 gi|89086132|gb|EAR65255.1| hypothetical protein B14911_08385 [Bacillus sp. NRRL B-14911]
          Length = 180

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 46/185 (24%), Gaps = 59/185 (31%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                    G  +V++N     L  V+  +V    +   G+    TP     +      P
Sbjct: 18  WPIGPNPLPGDPFVIINKQTNELALVDENRVQTVISAATGKTADLTPEGLFTVTVKAKEP 77

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                                 Y +  NI                               
Sbjct: 78  ----------------------YYRRKNIP----------------------------GG 87

Query: 303 GKINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
              N + +  I F           +H T EP        + +SGCVR++N  I  L   +
Sbjct: 88  SPENPLGTRWIGFDAEETDGRIYGIHGTNEPGSIGK---YVSSGCVRMQNEAIESLFELI 144

Query: 357 LKDTP 361
              T 
Sbjct: 145 PIGTK 149


>gi|304393160|ref|ZP_07375088.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303294167|gb|EFL88539.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 272

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 44/196 (22%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +G+  +S      +     I    +   R+     +K G   ++V+     L  V     
Sbjct: 101 TGVTTASLRTTQPMTSHAGIDPALL-PTRVSWSGTEKPGT--IIVDTVQRRLFLVGRDGS 157

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
             R  V VG+   +      ++ R M  P W  P     K+M+A +++            
Sbjct: 158 ARRYAVGVGKPGFE-WAGSHKVTRKMEWPSWTPP-----KEMIARVKR------------ 199

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILF 332
                                +     + G  N M +  +   S  + Y +H T +    
Sbjct: 200 -----------------ESGRDLPAFMEGGPNNPMGARALYLGS--SIYRIHGTNQAWSI 240

Query: 333 NNVVRFETSGCVRVRN 348
                  +SGC+R+RN
Sbjct: 241 GK---AVSSGCIRMRN 253


>gi|161521380|ref|YP_001584807.1| peptidoglycan binding domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189352453|ref|YP_001948080.1| putative bacteriophage-encoded peptidoglycan-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|327198031|ref|YP_004306400.1| gp33 [Burkholderia phage KS5]
 gi|160345430|gb|ABX18515.1| Peptidoglycan-binding domain 1 protein [Burkholderia multivorans
           ATCC 17616]
 gi|189336475|dbj|BAG45544.1| putative bacteriophage-encoded peptidoglycan-binding protein
           [Burkholderia multivorans ATCC 17616]
 gi|310657165|gb|ADP02280.1| gp33 [Burkholderia phage KS5]
          Length = 266

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 3/114 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + LHLG+    V  L+ +L+ +G           + +    AV  FQ  HGL   G+   
Sbjct: 3   KTLHLGDRGADVAYLQRQLVAAG---ARIDADAIYGSATRGAVVAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            T  A+             +L      L+  +     +  + +     + +G+ 
Sbjct: 60  KTWAALAAGRRDPRHLTDADLQCAADRLQADLAAVRAVNEVESRGAGFLPDGRP 113


>gi|302558839|ref|ZP_07311181.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302476457|gb|EFL39550.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 278

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 50/151 (33%), Gaps = 5/151 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+S   ++ L+ RL     +         +D     AV+ FQ + GL  +G+
Sbjct: 68  PARVLWSPGDSGRDIRELQARLRQVAWIFQGPT--GTYDEPTAEAVRGFQGKRGLPRTGV 125

Query: 157 VDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            DS T   +        R     +          +    R + ++  + +L  + +G+  
Sbjct: 126 TDSVTWRRLLDMTHEPGRWELYLMGGQPADAPDPRCGTGRVLCISKSSRTLRWMIDGRTV 185

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
               V  G     T     R+     +    
Sbjct: 186 STMAVRFGSEYTPTREGVFRVYWKSRDHVST 216


>gi|258512366|ref|YP_003185800.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479092|gb|ACV59411.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 112

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 35/119 (29%), Gaps = 15/119 (12%)

Query: 254 DMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           +++  L     YL +    +       GK V    +   +           P       +
Sbjct: 5   EIIVDLSDRRLYLLEAGKVIRAFPVGIGKMVTRTPIGQYTIVNKE------PNPGGPFGA 58

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
             +     +   +H T +P          + GC+R+ N   +  WL    P  +   I 
Sbjct: 59  YWMGLSKPH-YGIHGTNDPSSIGK---LVSHGCIRMYNKDVI--WLAHTVPLGTPVTIR 111


>gi|218462030|ref|ZP_03502121.1| hypothetical protein RetlK5_22248 [Rhizobium etli Kim 5]
          Length = 167

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 48/174 (27%), Gaps = 30/174 (17%)

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK--GKEVFV 283
                  +     + +P       + + +      Q   Y +D  +  +     G +   
Sbjct: 1   NPGSQFAAGDTVWVVSPGPPREGRVKRIEADKKTGQVLAYGEDGYLLAVYPATIGSKDNP 60

Query: 284 EEVDWNSPEP----------PNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMH 324
                +  +           P   F+Q           G    + +  I+        +H
Sbjct: 61  SPSGKHKVKGVARMPVYRYDPKRNFKQGNNNKVLTIPKGPNGPVGTVWIDLTEP-TYGIH 119

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
            TPEP L + V    + GCVR+ N    +L   +    P      +       K
Sbjct: 120 GTPEPKLIDKVG---SHGCVRLTNWDAEELAGMV---KPGVLVDFVNRSPAAPK 167


>gi|326777088|ref|ZP_08236353.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657421|gb|EGE42267.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 343

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 4/136 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G    +      + +    AV+ FQ +  L  +G  D+ T
Sbjct: 138 MRTGSESDRVRELQARLRQIGHFGRNPT--GYYGSVTADAVRSFQAKRRLPVTGSTDAVT 195

Query: 162 LEA-MNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            +  + +       +L     R     +++ +  R + ++  + +L  + +GKV     V
Sbjct: 196 WQRLLAMTRVPTAEELDPPTERPLAAPDERCLKGRVLCISKESRTLAWMRDGKVLSAMDV 255

Query: 220 IVGRVDRQTPILHSRI 235
             G     T      +
Sbjct: 256 RFGSEYTPTREGVFEV 271


>gi|222056278|ref|YP_002538640.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
 gi|221565567|gb|ACM21539.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
          Length = 320

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              +G+S   V  +++ L  +G           F    ++AV+ FQ   GL   G+V  +
Sbjct: 3   SYRIGSSGDDVMLIQKALQDAGFYQSQP--DGVFGPNTDAAVRNFQAASGLGGDGIVGPA 60

Query: 161 TLEAMNVPVDLRIRQLQVNLM 181
           T   +          L  +L 
Sbjct: 61  TWAKLFPSQSPAPAPLSGSLD 81


>gi|182436464|ref|YP_001824183.1| hypothetical protein SGR_2671 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464980|dbj|BAG19500.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 206

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 4/136 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V+ L+ RL   G    +      + +    AV+ FQ +  L  +G  D+ T
Sbjct: 1   MRTGSESDRVRELQARLRQIGHFGRNPT--GYYGSVTADAVRSFQAKRRLPVTGSTDAVT 58

Query: 162 LEA-MNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            +  + +       +L     R     +++ +  R + ++  + +L  + +GKV     V
Sbjct: 59  WQRLLAMTRVPTAEELDPPTERPLAAPDERCLKGRVLCISKESRTLAWMRDGKVLSAMDV 118

Query: 220 IVGRVDRQTPILHSRI 235
             G     T      +
Sbjct: 119 RFGSEYTPTREGVFEV 134


>gi|261420639|ref|YP_003254321.1| NLP/P60 protein [Geobacillus sp. Y412MC61]
 gi|319768309|ref|YP_004133810.1| NLP/P60 protein [Geobacillus sp. Y412MC52]
 gi|261377096|gb|ACX79839.1| NLP/P60 protein [Geobacillus sp. Y412MC61]
 gi|317113175|gb|ADU95667.1| NLP/P60 protein [Geobacillus sp. Y412MC52]
          Length = 450

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+   +V  L+ RL   G       ++  + A    AVK FQ  +GL  +G  
Sbjct: 95  SNDTLAIGSRGAAVSDLQRRLKQLGYF-RYPQITGYYGAVTADAVKQFQQANGLPATGRA 153

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLM 181
           D +TLE +     ++  +L   L 
Sbjct: 154 DRATLERLKQKATIKTAELSDTLT 177



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 57/197 (28%), Gaps = 23/197 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVND------RFDNFLARVDMGIDSDI------PIISKET 74
               +        +++    +         +   +   V              P   +  
Sbjct: 95  SNDTLAIGSRGAAVSDLQRRLKQLGYFRYPQITGYYGAVTADAVKQFQQANGLPATGRAD 154

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            A  E+         +           L +G+    V++L+++L   G    S  ++  +
Sbjct: 155 RATLERLKQKATIKTAE------LSDTLTIGSRGDDVRKLQQQLKQLGYFTYS-DITGYY 207

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK---KLLEQKM 191
                 AV+ FQ  +GL  +G VD+ T   +   V  +       + R +   +L    +
Sbjct: 208 GVLTADAVRRFQRDNGLPVTGAVDNQTAARLASAVKAKTTSPA-PIERERQAVRLSIGAL 266

Query: 192 GLRYVLVNIPAASLEAV 208
           G     +      L   
Sbjct: 267 GDDVKRIQTKLKELGYF 283



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G SS  + ++++RL   G        +  F A  E AVK FQ    L  +G+VD +T 
Sbjct: 29  KKGMSSPEITQIQQRLKEQGFFT-YPKATGYFGAITEEAVKAFQRAMNLPATGIVDDATY 87

Query: 163 EAMNVPVD 170
             +  P  
Sbjct: 88  AKLKKPAS 95



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G     V+R++ +L   G       ++  + A    AV+ FQ    L  +G+VD
Sbjct: 258 AVRLSIGALGDDVKRIQTKLKELGYF--WTAITGYYGAATADAVRRFQQAAQLPATGIVD 315

Query: 159 SSTLEA-MNVPVDLRIRQLQV 178
             T E  +      ++  +++
Sbjct: 316 GETYERLIGQAPAAKLDVIEL 336


>gi|77748527|ref|NP_640821.2| lytic enzyme [Xanthomonas axonopodis pv. citri str. 306]
          Length = 584

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 12/121 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S E         +A A +    S  G   +       G+SS  V +L++ L  
Sbjct: 356 DANGKLTSPENFWNQGHQHQAGARHTQAASASGTGAV-----RHGDSSQDVGKLQQDLNR 410

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A++  PV  R  Q+
Sbjct: 411 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQV 470

Query: 177 Q 177
            
Sbjct: 471 A 471


>gi|317126727|ref|YP_004100839.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
 gi|315590815|gb|ADU50112.1| cell wall hydrolase/autolysin [Intrasporangium calvum DSM 43043]
          Length = 418

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPS 154
            L  G+S  +V  +  RL+++GDL  S         +  FD  VE AVK FQ R GL   
Sbjct: 8   VLRRGDSGPAVADVCARLLLTGDLPASWAERGVPRGTAVFDETVEEAVKSFQQRRGLLVD 67

Query: 155 GMVDSSTLEAMN 166
           G+V  ST   ++
Sbjct: 68  GVVGRSTYSVLD 79



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V RL+ RL+  G       +        ++A++ FQ   GL P G +   TL A   
Sbjct: 100 GDDVVRLQARLLELGFTP--GKVDGIHGPATDAALRSFQAAVGLTPDGTLGPETLRAFQA 157


>gi|21106554|gb|AAM35357.1| lytic enzyme [Xanthomonas axonopodis pv. citri str. 306]
          Length = 589

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 46/121 (38%), Gaps = 12/121 (9%)

Query: 64  DSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
           D++  + S E         +A A +    S  G   +       G+SS  V +L++ L  
Sbjct: 361 DANGKLTSPENFWNQGHQHQAGARHTQAASASGTGAV-----RHGDSSQDVGKLQQDLNR 415

Query: 121 SGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLRIRQL 176
            G  D           F      AV  FQ +HGL   G+V   T  A++  PV  R  Q+
Sbjct: 416 LGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVGRDTRAALSAQPVQTREAQV 475

Query: 177 Q 177
            
Sbjct: 476 A 476


>gi|86356460|ref|YP_468352.1| hypothetical protein RHE_CH00814 [Rhizobium etli CFN 42]
 gi|86280562|gb|ABC89625.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 249

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +      T+ A+N  +      ++   +      +       ++++     
Sbjct: 68  FQRRV-IRHAPQPAPQTVSAINPGIPAIRHPIEPQYLPQMVDYDTMEKPGTIVIDTNNRF 126

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V  G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 127 LYLVMEGGKARRYGVGVGKPGFE-WAGAHKITRKQEWPDWTPPSEMISRE---------- 175

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 176 -AAKGHY------------------------LPARMDGGPENPLGARAMYLG-STLYRIH 209

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 210 GTNAPWSIGS---AVSSGCIRLRN 230


>gi|323491182|ref|ZP_08096368.1| general secretion pathway protein A [Vibrio brasiliensis LMG 20546]
 gi|323314550|gb|EGA67628.1| general secretion pathway protein A [Vibrio brasiliensis LMG 20546]
          Length = 540

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 21/168 (12%)

Query: 25  SLVEKPIHASVLDEIINESY----HSIVNDR--FDNFLARVDMGIDSDIPIISKETIAQT 78
            L    +    L ++   +        ++ +  F    A     +   +   + E I   
Sbjct: 379 GLFRCAVEQGNLSQLAESNTPVVLSLDIDGQPRFAVLYALSATKVQLLV---NDELIEFE 435

Query: 79  EKAIAF-----YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            + +       Y+ I   G W       L  G     V  L + L     L  ++  S  
Sbjct: 436 RQWLEEIWHGEYRHIWK-GYW----DETLKPGMQGQQVALLDKHLSQL--LGQAESDSPM 488

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           FD  +++ V+LFQ   GL   G+    TL  +          L  N  
Sbjct: 489 FDQQLKNKVELFQRWQGLSVDGIAGQKTLRLLETLSQPGAPTLTANEE 536


>gi|169825867|ref|YP_001696025.1| spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41]
 gi|168990355|gb|ACA37895.1| Spore protein ykuD-like protein [Lysinibacillus sphaericus C3-41]
          Length = 164

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLK 358
           DP       +  +     +   +H T +P    +     + GC+R++N    +L   +  
Sbjct: 101 DPNPGGPFGTMWMSLSKEH-YGIHGTNDPSSIGH---AVSHGCIRMQNPDVEELASIVPI 156

Query: 359 DTP 361
            T 
Sbjct: 157 GTE 159


>gi|291484832|dbj|BAI85907.1| hypothetical protein BSNT_03562 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 176

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 62/210 (29%), Gaps = 64/210 (30%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV+VN     L  + + +V    +V  G+ D  TP     +     NP     
Sbjct: 21  NPLPGDPYVIVNKRTNELAVILDNRVEGVYSVATGKTDDLTPEGEFSVTVKAENP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  NI                                  N 
Sbjct: 76  -----------------YYRKKNIE----------------------------GGSPDNP 90

Query: 308 MASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
           + +  I F ++        +H T           F ++GC+R+ N  D  V L +  P  
Sbjct: 91  LGARWIGFDAKGTDGRIYGIHGTNREESVGK---FVSNGCIRMHN--DEVVHLFQTIPVG 145

Query: 364 SRYHIEEVVKTRKTTPV---KL--ATEVPV 388
           +R  I +  ++ +   +    L    ++P+
Sbjct: 146 TRVLITDDNRSFEEIAIEHKALIKKQDIPI 175


>gi|229152352|ref|ZP_04280544.1| hypothetical protein bcere0011_38900 [Bacillus cereus m1550]
 gi|228630960|gb|EEK87597.1| hypothetical protein bcere0011_38900 [Bacillus cereus m1550]
          Length = 186

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 53/191 (27%), Gaps = 63/191 (32%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 17  WPLGDNPRAGDPFIIVNKATNKLAYIDDGKIQKVFPVATGKTNELTPEGTFDVVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  +                                 
Sbjct: 73  -----------------AKDPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHI 368
              P  ++  I
Sbjct: 141 DRIPIGTKVWI 151


>gi|186681476|ref|YP_001864672.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186463928|gb|ACC79729.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 379

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV+ L+++L  +G       ++  +D   + AV+ FQ   GL   G+V +S
Sbjct: 65  ALEKGDQGPSVRNLQQKLKTAGFY--QASVTQVYDVSTQEAVRRFQKAVGLPVDGIVGAS 122

Query: 161 TLEAMN 166
           TL+ + 
Sbjct: 123 TLQKLE 128



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L +G+   SV+ ++E+LI +G L+     +  +  Y   AV+ FQ  + L  SG+
Sbjct: 251 VNRDKLRVGDRGESVRIIQEQLIQAGYLEGEP--NGYYGPYTADAVRRFQAANFLAASGV 308

Query: 157 VDSSTLEAMNVPV 169
              +T   +   V
Sbjct: 309 AGPTTRAKLYSSV 321



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+ERL I+G    +      F    E +VK FQ  + L   G+   +T
Sbjct: 174 LAKGDEGEDVRALQERLRIAGFYYGNAT--GIFGPITEESVKRFQDSYKLSVDGIAGPAT 231

Query: 162 LEAMN 166
           L  + 
Sbjct: 232 LRKLP 236


>gi|297585348|ref|YP_003701128.1| NLP/P60 protein [Bacillus selenitireducens MLS10]
 gi|297143805|gb|ADI00563.1| NLP/P60 protein [Bacillus selenitireducens MLS10]
          Length = 507

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G S  SV+ L+ RL   G           F    +SAV  FQ   GL   G+ 
Sbjct: 228 STDTLREGMSGDSVRALQTRLKDLGHYHHRVT--GIFGPLTKSAVISFQRNEGLTADGIA 285

Query: 158 DSSTLEAMNVPVDLRI 173
            + TL+AM        
Sbjct: 286 GARTLKAMQQASAAPA 301



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 22/72 (30%), Gaps = 1/72 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G     V  L+  L   G        +  F    E AV+ FQ    +   G+V  
Sbjct: 35  QTLRQGMDHPDVVELQTMLKDKGYFT-YHTATGYFGTITEEAVRKFQREANIQVDGVVGP 93

Query: 160 STLEAMNVPVDL 171
            T   +      
Sbjct: 94  ETYRQLLSTSAP 105



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 6/144 (4%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
               +   +  + +      + +   + + +  +   +     I  +     T   IA  
Sbjct: 228 STDTLREGMSGDSVRALQTRLKDLGHYHHRVTGIFGPLTKSAVISFQRNEGLTADGIAGA 287

Query: 86  QDILSRGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           + + +       P      L  G++  +V+ L+ERL  +G    +      F    + AV
Sbjct: 288 RTLKAMQQASAAPAPTGFLLKEGDTGSNVRELQERLKATGHYKHNVT--GTFGPITKEAV 345

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN 166
           + FQ +  L   G+V +S  E + 
Sbjct: 346 RSFQSQWSLVNDGIVTASVWEKVE 369



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L  G     V+ L+  L   G L+     +  F       V+ FQ   GL   G+ 
Sbjct: 136 SSRLLREGVRGQDVEALQLALKQKGFLNIE-RATGYFGTVTAKGVRDFQQARGLKVDGIA 194

Query: 158 DSSTLEAMNV 167
              T+  +N 
Sbjct: 195 GPQTIGRLNA 204


>gi|296333452|ref|ZP_06875905.1| hypothetical protein BSU6633_20252 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675042|ref|YP_003866714.1| hypothetical protein BSUW23_11835 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149650|gb|EFG90546.1| hypothetical protein BSU6633_20252 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413286|gb|ADM38405.1| conserved hypothetical protein [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 176

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 56/197 (28%), Gaps = 59/197 (29%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV+VN     L  + + KV    +V  G+ D  TP     +     NP     
Sbjct: 21  NPLPGDPYVIVNKRTNELAVILDNKVEGVYSVATGKTDDLTPEGEFSVTVKAVNP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  +I                                  N 
Sbjct: 76  -----------------YYRKKSIE----------------------------GGSPDNP 90

Query: 308 MASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
           + +  I F ++        +H T           F ++GC+R+ N     V L +  P  
Sbjct: 91  LGARWIGFDAKGTDGRIYGIHGTNREDSIGK---FVSNGCIRMHNNE--VVHLFQTIPVG 145

Query: 364 SRYHIEEVVKTRKTTPV 380
           +R  I +  ++ +   +
Sbjct: 146 TRVLITDDTRSFEEIAI 162


>gi|148264215|ref|YP_001230921.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
 gi|146397715|gb|ABQ26348.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter uraniireducens Rf4]
          Length = 439

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 47/182 (25%)

Query: 181 MRIKKLLEQKMGL---RYVLVNIPAASLEAVENGK---VGLRSTVIVGRVDRQTPILHSR 234
            RI   L   +     + ++VN+    L   +      V     V VG  +R TP     
Sbjct: 108 ERIMLPLSFILPDAPRKGIVVNLATMRLFQFKGDSKSLVVSTYPVGVGTKERPTPTGQMH 167

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           + R    P W +P SI +                                    +  +  
Sbjct: 168 VERKATRPTWHVPASISED-----------------------------------HRKKGD 192

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
                  PG  N +    +    ++   +H T +P          T+GC+R+   N+  L
Sbjct: 193 PLPAEVPPGPQNPLGECALYLS-KSGYLIHGTNKPASIG---LKATNGCLRLYPENVKML 248

Query: 353 DV 354
             
Sbjct: 249 YD 250


>gi|116250643|ref|YP_766481.1| ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255291|emb|CAK06366.1| putative ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 248

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +  V   T+ A+N  +    R ++   +      +       ++++     
Sbjct: 67  FQRRI-IRRAPQVSPQTVSAINPGIPSIRRPIEPQYLPQMVDYDTTEKPGTIVIDTNNRF 125

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V  G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 126 LYLVMQGGKARRYGVGVGKPGFE-WAGAHKITRKTEWPDWTPPSEMISRE---------- 174

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 175 -AAKGHY------------------------LPARMDGGAENPLGARAMYLG-STLYRIH 208

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 209 GTNAPWSIGS---AVSSGCIRLRN 229


>gi|116074564|ref|ZP_01471825.1| hypothetical protein RS9916_28559 [Synechococcus sp. RS9916]
 gi|116067786|gb|EAU73539.1| hypothetical protein RS9916_28559 [Synechococcus sp. RS9916]
          Length = 206

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 67/216 (31%), Gaps = 72/216 (33%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +P       L+ +L R+   L Q++G++ ++++     L  + +G +  R    VG   
Sbjct: 38  PIPPVAEPISLEASLARVPMDLRQRLGVQ-LVLDRTHRQLLVLRDGVIRRRYPAAVGTEG 96

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            +TP    R+ + +  P W  P                              G+ +    
Sbjct: 97  WETPAGRHRVLQKVREPVWTHPV----------------------------DGRHIS--- 125

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFY------SRNNT------------YMHDTP 327
                            G+ N + +  I FY      +  +               H TP
Sbjct: 126 -----------------GEKNPLGTRWIGFYRDCKGRNGWDGEQYLDIAGCTVAGFHGTP 168

Query: 328 EPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                    R  + GCVR+   N+ ++   +   TP
Sbjct: 169 HRWTVG---RAVSHGCVRLYEENVQEVFDLVRVGTP 201


>gi|108802363|ref|YP_642560.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           MCS]
 gi|119871516|ref|YP_941468.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126438343|ref|YP_001074034.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108772782|gb|ABG11504.1| Peptidoglycan-binding domain 1 [Mycobacterium sp. MCS]
 gi|119697605|gb|ABL94678.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. KMS]
 gi|126238143|gb|ABO01544.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. JLS]
          Length = 398

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL--------SVAFDAYVESAVKLFQMRHGL 151
             L  G+   +V  +R  L   G LD             +  FD +++ AV+ FQ   GL
Sbjct: 2   SSLRHGDRGAAVTEIRAALSALGLLDSPDDDLTTGRHVVADLFDDHLDQAVRAFQQHRGL 61

Query: 152 DPSGMVDSSTLEAMN 166
              G+V  +T  A+ 
Sbjct: 62  LVDGIVGEATYRALK 76



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 69  IISKETIAQTEKAIAFY--QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           I+ + T    ++A      + ++ + G P               V  L+ RL   G    
Sbjct: 66  IVGEATYRALKEASYRLGARTLMHQFGAP----------MYGDDVATLQARLQDLGFY-- 113

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  +   F       +  +Q  +GL P G+    TL ++
Sbjct: 114 TGLVDGHFGLQTHHGLTSYQREYGLYPDGICGPETLRSL 152


>gi|288554208|ref|YP_003426143.1| endopeptidase, cell wall lytic activity [Bacillus pseudofirmus OF4]
 gi|288545368|gb|ADC49251.1| endopeptidase, cell wall lytic activity [Bacillus pseudofirmus OF4]
          Length = 393

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L +G +   V  L+E L   G        +  + +    AV+ FQ  +GL   G
Sbjct: 25  ALGDQTLRVGMNHTDVTELQEALKSKGYFTFD-RATGYYGSITADAVRKFQASNGLKVDG 83

Query: 156 MVDSSTLEAMNVP 168
           +    T  A+   
Sbjct: 84  IAGPQTFAALKAN 96



 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 31/99 (31%), Gaps = 7/99 (7%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
             +T A  +   +      S           L  G    +V  L+++L   G       +
Sbjct: 86  GPQTFAALKANGSTVTAASSNT-----SSATLRTGARGAAVTNLQQQLRNHGHFSS--AV 138

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              F    E AV+ FQ   GL   G+    T  A+    
Sbjct: 139 DGVFGPLTERAVRSFQSARGLSVDGIAGPQTFSALGQAA 177



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V RL++RL   G  + +      +      +V+ FQ  + L   G+    T
Sbjct: 191 LRQGTRSAEVTRLQDRLRQLGYFNSNST--GYYGTVTTESVRRFQAVNKLQVDGVAGPQT 248

Query: 162 LEAMNVP 168
           L  ++  
Sbjct: 249 LSRLHGS 255


>gi|157145092|ref|YP_001452411.1| hypothetical protein CKO_00823 [Citrobacter koseri ATCC BAA-895]
 gi|157082297|gb|ABV11975.1| hypothetical protein CKO_00823 [Citrobacter koseri ATCC BAA-895]
          Length = 310

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L    + G       + +G   R+TP    + + R    P W  P +  ++
Sbjct: 99  IVVNVAEMRLYYYPKGGDTVDVLPIGIGEAGRETPRNWVTAVERKQEAPSWT-PTANTRR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +        P +                                     G  N M    I
Sbjct: 158 EYAKRGESLPAF----------------------------------VPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI----- 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I     
Sbjct: 184 YIGKLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQIIDQPL 236

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+   +  +++   +
Sbjct: 237 KTTVEADGSRWIEVHEPL 254


>gi|56421723|ref|YP_149041.1| cell wall lytic activity [Geobacillus kaustophilus HTA426]
 gi|56381565|dbj|BAD77473.1| cell wall lytic activity [Geobacillus kaustophilus HTA426]
          Length = 451

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 20/178 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVND------RFDNFLARVDMGIDSDI------PIISKET 74
               +        +++    +         +   +   V              P   +  
Sbjct: 96  SNDTLAIGSRGAAVSDLQRRLKQLGYFRYPQITGYYGAVTADAVKQFQRANGLPATGRAD 155

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            A  E+           G  P  P   L +G     V++L+++L   G    S  ++  +
Sbjct: 156 RATLERLKQK-----EEGSSPS-PSAALTVGARGDEVRKLQQQLKQLGYFTYS-DITGYY 208

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
                 A++ FQ  +GL  +G VD+ T  A               + R +  +   +G
Sbjct: 209 GVLTADAIRRFQRDNGLPVTGAVDNQT-AARLASAVKAKTPPPAPIERERLAVRLSIG 265



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 59/262 (22%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFL-------ARVDMGIDS-----DIPIIS---K 72
                  +    I +    +    F  +        A  +  + +     ++P       
Sbjct: 25  AAEWKKGMSSPEIKQLQQRLKEKGFFTYPQATGYFGAITEEAVKAFQRAMNLPATGIVDD 84

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            T A+ + A A                  L +G+   +V  L+ RL   G       ++ 
Sbjct: 85  ATYAKLKSAPA--------------SNDTLAIGSRGAAVSDLQRRLKQLGYF-RYPQITG 129

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD----------------LRIRQL 176
            + A    AVK FQ  +GL  +G  D +TLE +    +                  +R+L
Sbjct: 130 YYGAVTADAVKQFQRANGLPATGRADRATLERLKQKEEGSSPSPSAALTVGARGDEVRKL 189

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI-LHSRI 235
           Q  L ++       +   Y ++   A      +NG        + G VD QT   L S +
Sbjct: 190 QQQLKQLGYFTYSDITGYYGVLTADAIRRFQRDNGLP------VTGAVDNQTAARLASAV 243

Query: 236 NRIMFNPYWVIPRSIIQKDMMA 257
                      P + I+++ +A
Sbjct: 244 KAK------TPPPAPIERERLA 259



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
             + A  +     ++   +     +   AR+   + +  P  +     +           
Sbjct: 209 GVLTADAIRRFQRDNGLPVTGAVDNQTAARLASAVKAKTPPPAPIERERL---------- 258

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                        L +G     V+R++ +L   G       ++  +      AV+ FQ  
Sbjct: 259 ----------AVRLSIGALGEDVKRIQTKLKELGYF--YTAITGYYGTATADAVRRFQQA 306

Query: 149 HGLDPSGMVDSSTLEAMNVPVDL 171
             L  +G+VDS T E +      
Sbjct: 307 AKLPATGIVDSETYERLLGQAPP 329


>gi|295704524|ref|YP_003597599.1| autolytic lysozyme [Bacillus megaterium DSM 319]
 gi|294802183|gb|ADF39249.1| autolytic lysozyme [Bacillus megaterium DSM 319]
          Length = 433

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 26/167 (15%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S ++V+ L++ LI  G     +G    + +   +AVK  Q ++GL  +G  
Sbjct: 220 PSAQLQQGDSGLAVKELQQNLIKLGFELSQQGTDGQYGSETVAAVKALQEKYGLTSTGKA 279

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D  TL  M   +      ++ +L ++  L     G +Y      +  ++A ++       
Sbjct: 280 DEKTLAKMMELLKGVSNPIEESLPKVTSL-----GDKY------SFQVKAKKD------- 321

Query: 218 TVIVGRVDRQTPILHSRINRIMF------NPYWVIPRSIIQ-KDMMA 257
            + V +    T    +     +F      N  W +P   +Q KD+  
Sbjct: 322 -IGVYKYANVTEDFRTIKKGTVFSVYGYTNAAWAVPGGFVQMKDVEP 367


>gi|228992894|ref|ZP_04152819.1| hypothetical protein bpmyx0001_36320 [Bacillus pseudomycoides DSM
           12442]
 gi|228766943|gb|EEM15581.1| hypothetical protein bpmyx0001_36320 [Bacillus pseudomycoides DSM
           12442]
          Length = 186

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKQTNKLAYIDDGKIQKVFPVATGKTNELTPEGSFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             ++P Y+  +                                 
Sbjct: 73  -----------------AKNPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F +R+       +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARDTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  +T +
Sbjct: 141 DRIPIGTKVWIVKSKRTFQ 159


>gi|157368843|ref|YP_001476832.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
 gi|157320607|gb|ABV39704.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia proteamaculans 568]
          Length = 306

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 51/185 (27%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G    +   + +G++ + TP+   + + R    P 
Sbjct: 91  LILPDAPREGIIINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPLNWTTTVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     +  +                                    + +          G
Sbjct: 151 WTPTAKMRAE-----------------------------------YAADGEILPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  +L  + P  
Sbjct: 176 PDNPMGLYALYVGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KFLFDNVPVG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|218755707|ref|ZP_03534503.1| hydrolase [Mycobacterium tuberculosis GM 1503]
 gi|254548919|ref|ZP_05139366.1| hydrolase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289764106|ref|ZP_06523484.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289711612|gb|EFD75628.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
          Length = 406

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G    +  +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFY--TGLVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|15843548|ref|NP_338585.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31795088|ref|NP_857581.1| putative hydrolase [Mycobacterium bovis AF2122/97]
 gi|57117169|ref|YP_178027.1| hydrolase [Mycobacterium tuberculosis H37Rv]
 gi|121635901|ref|YP_976124.1| putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121639826|ref|YP_980050.1| putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663782|ref|YP_001285305.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148825123|ref|YP_001289877.1| hydrolase [Mycobacterium tuberculosis F11]
 gi|167969452|ref|ZP_02551729.1| hypothetical hydrolase [Mycobacterium tuberculosis H37Ra]
 gi|215405973|ref|ZP_03418154.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|215413843|ref|ZP_03422508.1| hydrolase [Mycobacterium tuberculosis 94_M4241A]
 gi|215425177|ref|ZP_03423096.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|215432896|ref|ZP_03430815.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|215448262|ref|ZP_03435014.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|219555762|ref|ZP_03534838.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|224992321|ref|YP_002647011.1| putative hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800965|ref|YP_003033967.1| hydrolase [Mycobacterium tuberculosis KZN 1435]
 gi|254366451|ref|ZP_04982495.1| hypothetical hydrolase [Mycobacterium tuberculosis str. Haarlem]
 gi|260184845|ref|ZP_05762319.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|260198975|ref|ZP_05766466.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|260203128|ref|ZP_05770619.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289441358|ref|ZP_06431102.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|289445516|ref|ZP_06435260.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|289556183|ref|ZP_06445393.1| hydrolase [Mycobacterium tuberculosis KZN 605]
 gi|289567871|ref|ZP_06448098.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|289572567|ref|ZP_06452794.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289747759|ref|ZP_06507137.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|289748453|ref|ZP_06507831.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|289756050|ref|ZP_06515428.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|289760088|ref|ZP_06519466.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|297636602|ref|ZP_06954382.1| hydrolase [Mycobacterium tuberculosis KZN 4207]
 gi|297733597|ref|ZP_06962715.1| hydrolase [Mycobacterium tuberculosis KZN R506]
 gi|298527387|ref|ZP_07014796.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306778809|ref|ZP_07417146.1| hydrolase [Mycobacterium tuberculosis SUMu002]
 gi|306791520|ref|ZP_07429822.1| hydrolase [Mycobacterium tuberculosis SUMu005]
 gi|306795585|ref|ZP_07433887.1| hydrolase [Mycobacterium tuberculosis SUMu006]
 gi|307086717|ref|ZP_07495830.1| hydrolase [Mycobacterium tuberculosis SUMu012]
 gi|313660928|ref|ZP_07817808.1| hydrolase [Mycobacterium tuberculosis KZN V2475]
 gi|7478145|pir||C70851 probable hydrolase - Mycobacterium tuberculosis (strain H37RV)
 gi|13883926|gb|AAK48399.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis CDC1551]
 gi|31620686|emb|CAD96132.1| PUTATIVE HYDROLASE [Mycobacterium bovis AF2122/97]
 gi|38490393|emb|CAE55652.1| PROBABLE HYDROLASE [Mycobacterium tuberculosis H37Rv]
 gi|121491548|emb|CAL70005.1| Putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|121495474|emb|CAL73963.1| Putative hydrolase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|134151963|gb|EBA44008.1| hypothetical hydrolase [Mycobacterium tuberculosis str. Haarlem]
 gi|148507934|gb|ABQ75743.1| N-acetymuramyl-L-alanine amidase-related protein [Mycobacterium
           tuberculosis H37Ra]
 gi|148723650|gb|ABR08275.1| hypothetical hydrolase [Mycobacterium tuberculosis F11]
 gi|224775437|dbj|BAH28243.1| putative hydrolase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322469|gb|ACT27072.1| hydrolase [Mycobacterium tuberculosis KZN 1435]
 gi|289414277|gb|EFD11517.1| hydrolase [Mycobacterium tuberculosis T46]
 gi|289418474|gb|EFD15675.1| hydrolase [Mycobacterium tuberculosis CPHL_A]
 gi|289440815|gb|EFD23308.1| hydrolase [Mycobacterium tuberculosis KZN 605]
 gi|289536998|gb|EFD41576.1| hydrolase [Mycobacterium tuberculosis K85]
 gi|289541624|gb|EFD45273.1| hydrolase [Mycobacterium tuberculosis T17]
 gi|289688287|gb|EFD55775.1| hydrolase [Mycobacterium tuberculosis 02_1987]
 gi|289689040|gb|EFD56469.1| hydrolase [Mycobacterium tuberculosis T92]
 gi|289696637|gb|EFD64066.1| hydrolase [Mycobacterium tuberculosis EAS054]
 gi|289715652|gb|EFD79664.1| hydrolase [Mycobacterium tuberculosis T85]
 gi|298497181|gb|EFI32475.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308328146|gb|EFP16997.1| hydrolase [Mycobacterium tuberculosis SUMu002]
 gi|308339869|gb|EFP28720.1| hydrolase [Mycobacterium tuberculosis SUMu005]
 gi|308343881|gb|EFP32732.1| hydrolase [Mycobacterium tuberculosis SUMu006]
 gi|308363867|gb|EFP52718.1| hydrolase [Mycobacterium tuberculosis SUMu012]
 gi|323717331|gb|EGB26536.1| hydrolase [Mycobacterium tuberculosis CDC1551A]
 gi|328460693|gb|AEB06116.1| hydrolase [Mycobacterium tuberculosis KZN 4207]
          Length = 406

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G    +  +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFY--TGLVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|332982629|ref|YP_004464070.1| spore cortex-lytic enzyme [Mahella australiensis 50-1 BON]
 gi|332700307|gb|AEE97248.1| spore cortex-lytic enzyme [Mahella australiensis 50-1 BON]
          Length = 235

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L+ G     V  ++ +L   G  D    +  ++     +AV+ FQ ++GL   G+V 
Sbjct: 34  TGNLYYGAKGDKVAEVQRKLKQWGYYD--GPVDASYGPKTFAAVQQFQRKNGLKVDGVVG 91

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMR 182
            +T  AM V ++           R
Sbjct: 92  PATAAAMGVTLNTGKPSTAYTPSR 115


>gi|114564416|ref|YP_751930.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
           400]
 gi|114335709|gb|ABI73091.1| ErfK/YbiS/YcfS/YnhG family protein [Shewanella frigidimarina NCIMB
           400]
          Length = 305

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           V++N     L     GK       + +G++ + TP    + + R   NP W    +I + 
Sbjct: 99  VVINSAEMRLYYYPKGKNTVEVLPIGIGQIGKDTPENWVTTVQRKRANPTWTPTVNIRKS 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + +          G  N M    +
Sbjct: 159 -----------------------------------YAAKGITLPAVWPAGADNPMGLFAL 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +      H T     F   +R  +SGCVR+R+
Sbjct: 184 YVGNLYAV--HGTNA--TFGIGLR-VSSGCVRLRD 213


>gi|307945301|ref|ZP_07660637.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
 gi|307771174|gb|EFO30399.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
          Length = 204

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 52/203 (25%), Gaps = 40/203 (19%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q           D +T + +           +  + R       K  +  ++++     L
Sbjct: 22  QAAFAQAGGRFFDPNTRQWITYGPTHGNPSGKSPIRRKMVKYSTKYPVGTIVIDTSERRL 81

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
             V      ++  V VG+   Q      RI R    P W  P  +  ++           
Sbjct: 82  YHVRPNGKAMKYGVGVGKTGFQ-WAGTHRITRKAEWPGWTPPPQMRARE----------- 129

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
                                     +          G  N + +  +         +H 
Sbjct: 130 ------------------------RKKGRILPAHMPGGPNNPLGARALYIG-STLYRIHG 164

Query: 326 TPEPILFNNVVRFETSGCVRVRN 348
           T +P          +SGC+R+ N
Sbjct: 165 TNQPWTIG---GAVSSGCIRLAN 184


>gi|15613858|ref|NP_242161.1| hypothetical protein BH1295 [Bacillus halodurans C-125]
 gi|10173911|dbj|BAB05014.1| BH1295 [Bacillus halodurans C-125]
          Length = 881

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 18/144 (12%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
                + +      +    F+   A    G  ++        IA  ++       I+ R 
Sbjct: 10  VGSRGDEVAAIQRQLNQLGFNVGTADGIFGQRTE-----SAVIAFQKQNNLNSDGIVGRL 64

Query: 93  GWPEL-----------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            W +L           P   +  G+    V ++++RL   G    +      F      A
Sbjct: 65  TWDKLFDHRASGNHPFPGTLIGTGSRGEQVVKVQQRLNSLGY--NAGVADGIFGQGTRQA 122

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V  FQ  + L P G+V   T  A+
Sbjct: 123 VINFQSDYFLSPDGIVGELTWNAL 146



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 27/181 (14%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           +VG L  + +       + +P    L+            +      ++N  +    A   
Sbjct: 297 IVGRLTWDVLFRNNTTTVSIPYPGYLISS----GSSGNDVRRIQERLINMGYSVGAADGI 352

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL----------------PIRPLHL 104
                  PI  +   +           I+ R  W +L                P   L  
Sbjct: 353 -----FGPITKRAVESFQRDTGLDVDGIVGRLTWNQLFNGANVDNPGGATQSYPGVLLST 407

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S  SV+ ++ +L   G       +   F +  + AV+ FQ   GL   G+V   T  A
Sbjct: 408 GSSGDSVRAVQRKLQERGYYH--GVIDGIFGSMTDRAVRSFQHAMGLQVDGIVGRMTWNA 465

Query: 165 M 165
           +
Sbjct: 466 L 466



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P     +G+    V  ++ +L   G           F    ESAV  FQ ++ L+  G+V
Sbjct: 4   PGVLYSVGSRGDEVAAIQRQLNQLGF--NVGTADGIFGQRTESAVIAFQKQNNLNSDGIV 61

Query: 158 DSSTLEAM 165
              T + +
Sbjct: 62  GRLTWDKL 69



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 2/71 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L +G+    V+ ++ +L   G           F +  E  VK FQ    L   G+V
Sbjct: 159 PGFLLRVGSRGEEVKIVQNQLNRLGF--NVGTADGIFGSGTEQGVKDFQTSRNLQVDGIV 216

Query: 158 DSSTLEAMNVP 168
              T   +   
Sbjct: 217 GQETWNRLMSS 227



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 49/154 (31%), Gaps = 23/154 (14%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
              +      E +    + +    F+   A    G  ++  +   +T    +        
Sbjct: 160 GFLLRVGSRGEEVKIVQNQLNRLGFNVGTADGIFGSGTEQGVKDFQTSRNLQ-----VDG 214

Query: 88  ILSRGGWPEL----------------PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           I+ +  W  L                P   L LG +   V+ ++ +L  +     +  + 
Sbjct: 215 IVGQETWNRLMSSSSSGEGINNNVPYPGVLLSLGATGDLVRSVQRQLNSNHY--NAGVVD 272

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F    + AV  FQ  +GL   G+V   T + +
Sbjct: 273 GIFGGQTQQAVMNFQRTNGLSVDGIVGRLTWDVL 306


>gi|158313774|ref|YP_001506282.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109179|gb|ABW11376.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 187

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 62/244 (25%), Gaps = 74/244 (30%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            L+ RL+  G        +  + A    AV   Q   GL+  G+V  +T  ++       
Sbjct: 3   ALQRRLVELGYWLGEP--NGIYGALTVQAVLAAQKVAGLERDGLVGPATWASLRQGPRPL 60

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
                                  + V++    L  V++G V        G          
Sbjct: 61  AVT---------------GSGLALEVDVARQLLLVVQDGSVRQILNTSTGTERWY----E 101

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
            R  R++ +                           +    +D     V    +      
Sbjct: 102 VRGQRLLADTPRG---------------------TWHVYRQVDG----VDPGPLG----- 131

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                              + +++  +   +H        +   R  + GCVRV N  + 
Sbjct: 132 ----------------GLYRPKYFHTDGIAVHG-----YVSVPGRAASHGCVRVTN--EA 168

Query: 353 DVWL 356
             WL
Sbjct: 169 MDWL 172


>gi|226311558|ref|YP_002771452.1| spore protein YkuD [Brevibacillus brevis NBRC 100599]
 gi|226094506|dbj|BAH42948.1| spore protein YkuD [Brevibacillus brevis NBRC 100599]
          Length = 123

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           D+       +      G+++A  +  +     +   +H T +P        + + GC+R+
Sbjct: 45  DFTIISKVPYPNSYPGGRLSAFGTLWMGLSKPH-YGIHGTNDPSSIGK---YVSHGCIRM 100

Query: 347 --RNIIDLDVWLLKDTP 361
              ++  L   +   TP
Sbjct: 101 FNEDVNALAKIVPIGTP 117



 Score = 38.9 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 34/113 (30%), Gaps = 1/113 (0%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +    + ++I    L+  +  ++     V +G++   TP     I   +  P       +
Sbjct: 4   LPSYNIRISIAKLRLDLFDGNRLIRSYPVALGKIATSTPRGDFTIISKVPYPNSYPGGRL 63

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
                + +    P Y   +  +     GK V    +   + +          G
Sbjct: 64  SAFGTLWMGLSKPHYGI-HGTNDPSSIGKYVSHGCIRMFNEDVNALAKIVPIG 115


>gi|254233397|ref|ZP_04926723.1| hypothetical protein TBCG_03842 [Mycobacterium tuberculosis C]
 gi|124603190|gb|EAY61465.1| hypothetical protein TBCG_03842 [Mycobacterium tuberculosis C]
          Length = 401

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G    +  +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFY--TGLVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|326905748|gb|EGE52681.1| hydrolase [Mycobacterium tuberculosis W-148]
          Length = 406

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G LD  +             FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRAALTALGMLDHQEEDLTTGRNVALELFDAQLDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 76  AQTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNS-----------SVSVQRLRE 116
           AQ ++A+  +Q         I+    +  L      LG                V  L+ 
Sbjct: 54  AQLDQAVRAFQQHRGLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQA 113

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL   G    +  +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 114 RLQDLGFY--TGLVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 160


>gi|166368768|ref|YP_001661041.1| lysozyme [Microcystis aeruginosa NIES-843]
 gi|166091141|dbj|BAG05849.1| probable lysozyme [Microcystis aeruginosa NIES-843]
          Length = 504

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 37/255 (14%)

Query: 95  PELPIRPLHLGNSSVS-----VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR- 148
           P+L    L  G S        ++ ++ERL   G       L   F +  + AV+ FQ   
Sbjct: 248 PQLNRGLLLKGMSDEDAPGYDIREMQERLKDLGYYQKE--LDGIFGSGTDEAVRKFQADV 305

Query: 149 HGL-DPSGMVDSSTLEAM---NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
            G  +  G V   T   +           +  +   +R+ K  ++     Y+L+      
Sbjct: 306 FGHSEADGKVGPKTWAKLWGEETTPTPTPQPAEGTYLRLTKTNQKDGDGLYILI------ 359

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD-- 262
           LE ++NG+V     V  G+  R   +  +    +  +   +        D++    +D  
Sbjct: 360 LEYIKNGQVKDHLKVCSGQ--RSKQLFRTGPQSVSGSMEPLPEGKWYINDILWAGGKDKY 417

Query: 263 -PQYLKDNNIHMIDEKGKEVF----VEEVDWNSPEPPNFIFRQDPGKINAMAST------ 311
            P    +    +                ++ +      +     PG    +         
Sbjct: 418 GPTVFSNGLGPVTTPIKYVGPNSTRRSAIEIHIDWNGKYCDGPCPGTAGCLGIYDIADYK 477

Query: 312 ----KIEFYSRNNTY 322
                +   + ++ Y
Sbjct: 478 KLVSWLRDTNPHDLY 492


>gi|56694927|ref|YP_164437.1| lysin [Bacillus phage BCJA1c]
 gi|52631354|gb|AAU85106.1| lysin [Bacillus phage BCJA1c]
          Length = 355

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 36/100 (36%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G     V+ L+E+LI  G      G    F     +AV+ FQ   G+   G+ 
Sbjct: 211 TGQVLRHGERGPLVRSLQEQLIDKGFDLGRYGADGVFGDITRNAVRDFQRAAGIAVDGVP 270

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
              T  A+      + + + V++ R+            V 
Sbjct: 271 GPQTFRALKAYQPDKGQMVIVDVDRLNVRSRPSFADSAVS 310


>gi|330883400|gb|EGH17549.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 164

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 6/69 (8%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV-- 346
           ++ +          G  N +   K          +H + +   F   +R  + GC R+  
Sbjct: 2   HAADGDPLPDVVPAGPDNPLGPFKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYN 57

Query: 347 RNIIDLDVW 355
            N+++L   
Sbjct: 58  NNVLELADM 66


>gi|298243007|ref|ZP_06966814.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297556061|gb|EFH89925.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 545

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 4/108 (3%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
           P  +   ++           ++    WP L +     G++  +V  L+ +L   G    S
Sbjct: 79  PQTTGAVVSFQSAQGLQADGVVGPQTWPALIVTT-SQGSTGSAVLALQRQLNAHG---AS 134

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
             +   F     +AVK FQ  HGL   G+    T  A+      +   
Sbjct: 135 LSVDGQFGPATAAAVKSFQSSHGLSADGVAGPQTWNALVGSKSSQAYS 182



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 10/106 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGD 123
               +T A T KA      + + G      WP L +     G++  +V  L+ +L   G 
Sbjct: 214 SFGPQT-ASTAKAFQSAHGLGADGIVGPQTWPVLIVTT-SQGSTGSAVLALQRQLNAHG- 270

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              S  +   F +  E+AVK +Q    L   G+       ++    
Sbjct: 271 --ASLSVDGQFGSATETAVKNYQSSQKLSVDGVAGPQIWSSLVSTA 314



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 38/148 (25%), Gaps = 18/148 (12%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
                  +          + +   A + +      P  +    +           +    
Sbjct: 114 QGSTGSAVLALQR-----QLNAHGASLSVDGQF-GPATAAAVKSFQSSHGLSADGVAGPQ 167

Query: 93  GWPELPIRP---------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            W  L             +  G +  +V  ++  L   G    S  +  +F     S  K
Sbjct: 168 TWNALVGSKSSQAYSWPDIGQGATGENVYSIQLMLQAHGY---SLPIDGSFGPQTASTAK 224

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
            FQ  HGL   G+V   T   + V    
Sbjct: 225 AFQSAHGLGADGIVGPQTWPVLIVTTSQ 252


>gi|283853882|ref|ZP_06371096.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
 gi|283570724|gb|EFC18770.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio sp. FW1012B]
          Length = 234

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 21/152 (13%)

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            + G    +    +   +R +  +  R+++     Y  +P          L R+    + 
Sbjct: 73  YQPGLPDDQMAEFLASKNRYS--IEVRLSQRTLYLYENLPDGTRH-----LARRYAVAVP 125

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSP----------EPPNFIFRQDPG-KINAMASTKIEFY 316
             ++      G    +    W  P          +         PG K N M   KI   
Sbjct: 126 GRDMEAPQGWGVVTGISFEPWWRPTPAMKERALKKGKQLPEVVKPGVKENPMGPFKIILS 185

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                 +H    P       R  TSGC+R++N
Sbjct: 186 HGYGYRIHGNNNPGSIG---RPVTSGCIRMQN 214


>gi|227487672|ref|ZP_03917988.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227541382|ref|ZP_03971431.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227092366|gb|EEI27678.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227182933|gb|EEI63905.1| hydrolase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 392

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 18/152 (11%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +        + E   ++     ++  +            +  E +++   A    + IL+
Sbjct: 7   LSVGDRSPRVAEVRATLARLGRNDAFSAPLADDFRVEETLFDEELSELLCAFQQSRGILA 66

Query: 91  RGGWPELPIRPLH--------------LG--NSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            G   E  +R L                G       V +L+ +L   G    +  +   +
Sbjct: 67  TGMIDEPTLRALREASYTLGTRVLNFIPGKQMVGDDVVQLQTQLQELGFY--TDKVDGHY 124

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           D     AVK +Q+  GL   G+    T+ A++
Sbjct: 125 DDVTYEAVKTYQLNSGLTEDGICGPETVRALS 156



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 65/196 (33%), Gaps = 21/196 (10%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGL----SVAFDAYVESAVKLFQM 147
            + ++ L +G+ S  V  +R  L   G       P           FD  +   +  FQ 
Sbjct: 1   MVVLKKLSVGDRSPRVAEVRATLARLGRNDAFSAPLADDFRVEETLFDEELSELLCAFQQ 60

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             G+  +GM+D  TL A+       +    +N +  K+++   +      +       + 
Sbjct: 61  SRGILATGMIDEPTLRALRE-ASYTLGTRVLNFIPGKQMVGDDVVQLQTQLQELGFYTDK 119

Query: 208 VENGKVGLRSTVIVGRVDRQ--------TPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
           V+     +    +                P     ++ +  +     P +I +++++   
Sbjct: 120 VDGHYDDVTYEAVKTYQLNSGLTEDGICGPETVRALSLLGHHITGGNPLAIRERELV--- 176

Query: 260 RQDPQYLKDNNIHMID 275
            ++   L      +ID
Sbjct: 177 -RNAGPLLSGKRVVID 191


>gi|310641655|ref|YP_003946413.1| l,d-transpeptidase ykud [Paenibacillus polymyxa SC2]
 gi|309246605|gb|ADO56172.1| Putative L,D-transpeptidase YkuD [Paenibacillus polymyxa SC2]
          Length = 112

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           ++  L     YLKD +  ++      V + +V   +P     I  + P       +  + 
Sbjct: 6   IVVDLSDRRLYLKDGSQIVLSY---PVGIGKVATQTPHGQFTIINKQPNPGGPFGAFWMG 62

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
               +   +H T EP          + GC+R++N  +++L   +   TP
Sbjct: 63  LSKPH-YGIHGTNEPSSIGQ---MVSHGCIRMQNKDVLELQEKVSIGTP 107


>gi|15964534|ref|NP_384887.1| hypothetical protein SMc00924 [Sinorhizobium meliloti 1021]
 gi|307308482|ref|ZP_07588186.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307322405|ref|ZP_07601762.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|15073711|emb|CAC45353.1| Hypothetical protein SMc00924 [Sinorhizobium meliloti 1021]
 gi|306891940|gb|EFN22769.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306901085|gb|EFN31693.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 246

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 45/212 (21%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             +  V  +++     P      Q+    +      E K     ++++     L  V   
Sbjct: 74  PANAAVQPASIARRQKPAK---SQIDPQFLPQMIAYETKEKPGTIVIDTNNRFLYLVTGN 130

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
               R  V VG+   +      RI R    P W  P+ +I ++               + 
Sbjct: 131 GEARRYGVGVGKPGFE-WAGEHRITRKAEWPNWTPPQEMIARE-----------AARGHY 178

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                                      R D G  N + +  +         +H T  P  
Sbjct: 179 ------------------------LPARMDGGPENPLGARAMYLG-STLYRIHGTNAPWT 213

Query: 332 FNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                   +SGC+R+RN  ++DL   +   T 
Sbjct: 214 IGYG---VSSGCIRMRNEDVVDLYERVKVGTK 242


>gi|288549819|ref|ZP_05968304.2| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317538|gb|EFC56476.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Enterobacter
           cancerogenus ATCC 35316]
          Length = 323

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 116 IVVNVAEMRLYYYPPGSNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPTWTPTPNTRRE 175

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + E          G  N M    I
Sbjct: 176 -----------------------------------YAKEGKTLPAFVPAGPDNPMGLYAI 200

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVV 372
                     H T     F   +R  + GC+R+RN      +L  + P  +R   I+  V
Sbjct: 201 YIGRLYAI--HGTNS--NFGIGLR-VSQGCIRLRNAD--IKYLFDNVPVGTRVELIDRPV 253

Query: 373 KTRKT----TPVKLATEV 386
           K          V++   +
Sbjct: 254 KMTTEPDGSRWVEVHEPL 271


>gi|297201935|ref|ZP_06919332.1| lipoprotein [Streptomyces sviceus ATCC 29083]
 gi|197712688|gb|EDY56722.1| lipoprotein [Streptomyces sviceus ATCC 29083]
          Length = 279

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 4/143 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P      G+S   V+ L+ RL     L    G + ++D   E AVK FQ + GL  +G  
Sbjct: 70  PAVLWSRGDSGRDVRELQARLRQVAWL--YDGPTGSYDDLTERAVKGFQGKRGLPRTGRT 127

Query: 158 DSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           D+ T + +        +     +          + +  R + ++  + +L  + +G+  +
Sbjct: 128 DTVTWKRLKAMTHEPGKWELYLMGGQPADAPDPRCLTGRVLCISKTSRTLRWMIDGRTVM 187

Query: 216 RSTVIVGRVDRQTPILHSRINRI 238
             +V  G V   T      +   
Sbjct: 188 TVSVRFGSVGTPTREGVFSVYWK 210


>gi|325003245|ref|ZP_08124357.1| N-acetylmuramoyl-L-alanine amidase [Pseudonocardia sp. P1]
          Length = 386

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S  +V+ +R  L   G L    P       FD  V+ AV++FQ   GL   G+V 
Sbjct: 4   LRRGDSGPAVREIRATLRELGLLPALSPGTSDRDVFDDEVDHAVRVFQQGRGLITDGIVG 63

Query: 159 SSTLEAMN 166
             T  A+ 
Sbjct: 64  PDTARALR 71



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 27/127 (21%)

Query: 66  DIPIISKET---------IAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS---- 107
            +P +S  T         +    +     + +++ G       R L      LG+     
Sbjct: 25  LLPALSPGTSDRDVFDDEVDHAVRVFQQGRGLITDGIVGPDTARALREAGWSLGDRMLSF 84

Query: 108 -------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
                     V  L+ERL+  G        S  FD   E A+  FQ  +G+ P GM    
Sbjct: 85  TLSTPTNGDDVATLQERLLELGY--NPGRPSGLFDQQTEQALMRFQRDYGMVPDGMCGPE 142

Query: 161 TLEAMNV 167
           TL A+  
Sbjct: 143 TLRALRQ 149


>gi|313893120|ref|ZP_07826697.1| NlpC/P60 family protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442473|gb|EFR60888.1| NlpC/P60 family protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 270

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G
Sbjct: 24  MVGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDG 81

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +V  +T  A+          L  N  
Sbjct: 82  IVGPATYNALMGAPRSTKAVLTQNAA 107


>gi|282850480|ref|ZP_06259859.1| NlpC/P60 family protein [Veillonella parvula ATCC 17745]
 gi|294792103|ref|ZP_06757251.1| endopeptidase, cell wall lytic activity [Veillonella sp. 6_1_27]
 gi|282579973|gb|EFB85377.1| NlpC/P60 family protein [Veillonella parvula ATCC 17745]
 gi|294457333|gb|EFG25695.1| endopeptidase, cell wall lytic activity [Veillonella sp. 6_1_27]
          Length = 270

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G
Sbjct: 24  MVGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDG 81

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +V  +T  A+          L  N  
Sbjct: 82  IVGPATYNALMGAPRSTKAVLTQNAA 107


>gi|269798242|ref|YP_003312142.1| NLP/P60 protein [Veillonella parvula DSM 2008]
 gi|294793974|ref|ZP_06759111.1| protein P60 [Veillonella sp. 3_1_44]
 gi|269094871|gb|ACZ24862.1| NLP/P60 protein [Veillonella parvula DSM 2008]
 gi|294455544|gb|EFG23916.1| protein P60 [Veillonella sp. 3_1_44]
          Length = 270

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G
Sbjct: 24  MVGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDG 81

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +V  +T  A+          L  N  
Sbjct: 82  IVGPATYNALMGAPRSTKAVLTQNAA 107


>gi|307266815|ref|ZP_07548338.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918156|gb|EFN48407.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 327

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+    V  L+ RL           +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDKGPFVVNLQARLKSLSF--DPGPIDGIFGRKTEEAVKAYQQSRGLPVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|226358219|ref|YP_002787958.1| bifunctional protein, precursor : N-acetylmuramoyl-L-alanine
           amidase; Muramoylpentapeptide carboxypeptidase
           [Deinococcus deserti VCD115]
 gi|226319862|gb|ACO47856.1| putative bifunctional protein, precursor :
           N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide
           carboxypeptidase [Deinococcus deserti VCD115]
          Length = 359

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P  +    A    A      ++    W  L  R +  G+S  +VQ  + +L   G  
Sbjct: 261 SYGPATASAVSAFQSGAGLTPDGVIGSATWERLI-RTVRRGDSGPAVQAAQGQLAARGY- 318

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                    F A  ESAV+ FQ   GL   G+V  +T  A+ 
Sbjct: 319 --GVTADGVFGAGTESAVRSFQSSRGLTSDGIVGPNTWHALE 358



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP         G +   V+  +  L+  G    S     ++     SAV  FQ   GL P
Sbjct: 230 WPTT-----RSGQTGERVRSAQRLLVSHG---QSLTADGSYGPATASAVSAFQSGAGLTP 281

Query: 154 SGMVDSSTLEAMNVPVD 170
            G++ S+T E +   V 
Sbjct: 282 DGVIGSATWERLIRTVR 298


>gi|297192509|ref|ZP_06909907.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718051|gb|EDY61959.1| lipoprotein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 282

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 5/200 (2%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS 108
           +       +       S  P     + +++E A    +   S       P   +  G   
Sbjct: 23  DAPSAGTPSAAPATSASTPPASPTPSASESETAEPSKKPSPSPSTQKPAPKVLMAPGAKG 82

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-MNV 167
             V+ L+ RL   G  D     +  +     +AVK FQ + GL  +G  D+ T +  + +
Sbjct: 83  EQVRELQARLAQIGWFD--DKPTGTYGPVTTTAVKGFQGKRGLLATGSTDTVTWDRLLGM 140

Query: 168 PVDLRIRQLQVNLMRI--KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                  +L    ++    KL  + M  R + ++    +L  + +GKV     V  G   
Sbjct: 141 TTKPTRAELDGKDVKKPQAKLDPRCMTGRVMCISKTTRTLSWMIDGKVLSTMDVRFGSQY 200

Query: 226 RQTPILHSRINRIMFNPYWV 245
             T     ++     +    
Sbjct: 201 TPTREGVFKVGWKSRDHVST 220


>gi|134301026|ref|YP_001114522.1| cell wall hydrolase SleB [Desulfotomaculum reducens MI-1]
 gi|134053726|gb|ABO51697.1| cell wall hydrolase, SleB [Desulfotomaculum reducens MI-1]
          Length = 234

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V+ +++RL   G  D    +   F     SAV+ FQ  HGL   G+V   T  A
Sbjct: 36  GSSGTKVRAVQQRLKDWGYYD--GPVDGYFSGKTASAVRKFQAYHGLATDGIVGPKTFSA 93

Query: 165 MNVPVDLR 172
           M +    R
Sbjct: 94  MGLYTPPR 101


>gi|284048182|ref|YP_003398521.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
 gi|283952403|gb|ADB47206.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
          Length = 232

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G S   V  ++E+L++ G           + A   +AVK +Q   GL   G++ + 
Sbjct: 24  SFKPGQSGPEVAAIQEQLLMEGY--DIGIPDGVYGARTVAAVKKYQASMGLAADGVIGNF 81

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T + +        R L  N
Sbjct: 82  TYKKLMGREMPTHRTLNTN 100


>gi|310642862|ref|YP_003947620.1| cell wall hydrolase, sleb [Paenibacillus polymyxa SC2]
 gi|309247812|gb|ADO57379.1| cell wall hydrolase, SleB [Paenibacillus polymyxa SC2]
          Length = 217

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  S  V  L+++L   G      G +  + +    AV  FQ  HGL P G+  
Sbjct: 30  SSALKKGIQSERVLELQQQLHSLGYFK--AGFTGYYGSLTSKAVARFQRDHGLAPDGIAG 87

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV-LVNIPAASLEAVENGKVGLRS 217
           ++T   ++    +R+  L       + +  +  G  +   V + A  L  V++G+     
Sbjct: 88  AATQAKLDSFGKVRVTALD---QLARIIYSEARGESFEGQVAVGAVVLNRVQSGEFPSSI 144

Query: 218 TVIVGRVDRQTPI 230
             ++ +  + T +
Sbjct: 145 PDVILQPGQFTAV 157


>gi|229086722|ref|ZP_04218889.1| hypothetical protein bcere0022_33010 [Bacillus cereus Rock3-44]
 gi|228696596|gb|EEL49414.1| hypothetical protein bcere0022_33010 [Bacillus cereus Rock3-44]
          Length = 180

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     V  G+ +  TP     +       
Sbjct: 11  WPLGDNPRAGDPFIIVNKQTNKLAYIDDGKIQKIFPVATGKTNELTPEGTFDVVMK---- 66

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             +DP Y+  N                                 
Sbjct: 67  -----------------AKDPYYIAKN------------------------------IPG 79

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  I F       +   +H T +P        + + GC+R++       +L 
Sbjct: 80  GSPKNPLGSRWIGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKHD--VEYLF 134

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  KT +
Sbjct: 135 DRIPIGTKVLIVKSKKTFQ 153


>gi|325924744|ref|ZP_08186181.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325544836|gb|EGD16182.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 630

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V+ L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 429 APGVLRENARGAEVRTLQQTLQQLGYKDAGGNEIKADGAYGQRTSEAVKAFQRAHGLQDD 488

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T  A+       +   + N
Sbjct: 489 GVVGRDTQAALKQAEKTPLLSEKTN 513


>gi|270263801|ref|ZP_06192069.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
 gi|270041994|gb|EFA15090.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera 4Rx13]
          Length = 306

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 64/208 (30%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L     G    +   + +G++ + TP+   + + R    P 
Sbjct: 91  LILPDAPREGIIINSAEMRLYYYPKGSNTVVVLPIGIGQLGKDTPLNWITSVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P + ++++                                   + +          G
Sbjct: 151 WT-PTAKMREE----------------------------------YAADGEILPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  +L  + P  
Sbjct: 176 PDNPMGLYALYVGRLYAI--HGTNA--NFGIGLR-VSHGCVRLR-ADDI-KYLFDNVPVG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       ++  V+   +  V++   +
Sbjct: 229 TRVQFINEPVKATVEPDGSRYVEVHNPL 256


>gi|78049307|ref|YP_365482.1| hypothetical protein XCV3751 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037737|emb|CAJ25482.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 630

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V+ L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 429 APGVLRENARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSEAVKAFQRAHGLQDD 488

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T  A+       +   + N
Sbjct: 489 GVVGRDTQAALKQAEKTPLLSEKTN 513


>gi|118591608|ref|ZP_01549005.1| hypothetical protein SIAM614_28472 [Stappia aggregata IAM 12614]
 gi|118435936|gb|EAV42580.1| hypothetical protein SIAM614_28472 [Stappia aggregata IAM 12614]
          Length = 226

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 64/215 (29%), Gaps = 56/215 (26%)

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDL------RIRQLQVNLMRIKKLLEQKMGLRYV 196
           + FQ +       + D +T + ++           R  Q      R             +
Sbjct: 30  QSFQTQ-------IYDPTTRKWVDYTPRAAAKFYNRHGQSPEEFRRQVVPFRTAEKPGTI 82

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +++     L  V+     +R  + VGR D        +I R+   P W  P  +I +   
Sbjct: 83  IIDGDRHFLYLVQPNFQAIRYGIGVGR-DGFGWAGIVKIGRMQEWPTWTPPPEMIAR--- 138

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF- 315
                                      E   W +            G  N + +  +   
Sbjct: 139 -------------------------DPESAKWANG--------MPGGPDNPLGARAMYLY 165

Query: 316 -YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             ++++ Y +H T +P          +SGC+R+ N
Sbjct: 166 VGNKDSIYRIHGTNQPWTIG---LNISSGCIRLNN 197


>gi|291571162|dbj|BAI93434.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 303

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 63  IDSDI-PIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---------LHLGNSSVSVQ 112
           +DS   P   +  I            ++ R  W  L   P         +  G+    V+
Sbjct: 188 VDSLFGPRTERALINFQLSKGLRPTGVVDRSTWQALSKDPHQQTIAETLIKQGDRGSKVK 247

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L+ RL ++G       +   F     +AV  FQ+  GL+ +G+VD  T + + 
Sbjct: 248 TLQTRLELTGH--DPGPVDGIFGPKTLAAVSDFQLAMGLESTGVVDDKTWKVLG 299



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G   V V  L++RL + G       +   F    E A+  FQ+  GL P+G+VD S
Sbjct: 161 TLARGTQGVQVAGLQQRLEVHGF--SVGRVDSLFGPRTERALINFQLSKGLRPTGVVDRS 218

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 219 TWQALSKDP 227


>gi|238018984|ref|ZP_04599410.1| hypothetical protein VEIDISOL_00846 [Veillonella dispar ATCC 17748]
 gi|237864468|gb|EEP65758.1| hypothetical protein VEIDISOL_00846 [Veillonella dispar ATCC 17748]
          Length = 269

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L  G+   SV  ++++LI  G    +   +  +    + AV+LFQ   GL   G
Sbjct: 24  MVGATTLQYGDKGKSVTAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDG 81

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLM 181
           +V  +T  A+          L  N  
Sbjct: 82  IVGPATYNALMSAPRSTKAVLTQNAA 107


>gi|194014419|ref|ZP_03053036.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061]
 gi|194013445|gb|EDW23010.1| peptidoglycan binding protein [Bacillus pumilus ATCC 7061]
          Length = 166

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 48/153 (31%), Gaps = 11/153 (7%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW-VIPRSIIQKDMMALLRQDPQYLKDNN 270
            +  R+T    +    +      +   +        P +I  +  +++  +         
Sbjct: 17  ALDFRTTTEALKAANPSLQGREPLQNEVIIIPGLPDPNTIPYRISVSISSKRLVLFS--G 74

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPI 330
             +I      +    +   +P    +I  + P       +  +     +   +H T  P 
Sbjct: 75  SELIRSY--PIATGRILNMTPTGSYYIVNRQPNPGGPFGAYWLSLSKVH-YGIHGTNNPS 131

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                    + GC+R+  +N+I+L   +   TP
Sbjct: 132 SIGK---AVSRGCIRMYNQNVIELASIVPNGTP 161


>gi|241203249|ref|YP_002974345.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857139|gb|ACS54806.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 249

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 41/204 (20%)

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ R  +  +  V   T+ A+N  +    R ++   +      +       ++++     
Sbjct: 68  FQRRI-IRRAPQVSPQTVSAINPGIPSIRRPIEPQYLPQVVDYDTTEKPGTIVIDTNNRF 126

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V  G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 127 LYLVMQGGKARRYGVGVGKPGFE-WAGAHKITRKTEWPDWTPPSEMISRE---------- 175

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G  N + +  +         +H
Sbjct: 176 -AAKGHY------------------------LPARMDGGAENPLGARAMYLG-STLYRIH 209

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 210 GTNAPWSIGS---AVSSGCIRLRN 230


>gi|209523125|ref|ZP_03271681.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209496276|gb|EDZ96575.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 286

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 47/147 (31%), Gaps = 18/147 (12%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI-PIISKETIAQTEKAIAFYQDI 88
            +        +      +    F          IDS   P   +  I            +
Sbjct: 144 TLARGTEGAQVAGLQQRLEVHGFSVG------RIDSLFGPRTERSLIQFQLAKGLRPTGV 197

Query: 89  LSRGGWPELPIRP---------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + R  W  L   P         +  G+    V+ L+ RL ++G       +   F     
Sbjct: 198 VDRSTWQALSKDPHQQTIAETLIKQGDRGSKVRTLQTRLELTGH--DPGPVDGIFGPKTL 255

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SAV  FQ+  GL+ +G+VD  T + + 
Sbjct: 256 SAVSDFQLAMGLEATGVVDEKTWKVLG 282



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V  L++RL + G       +   F    E ++  FQ+  GL P+G+VD S
Sbjct: 144 TLARGTEGAQVAGLQQRLEVHGF--SVGRIDSLFGPRTERSLIQFQLAKGLRPTGVVDRS 201

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 202 TWQALSKDP 210


>gi|228998939|ref|ZP_04158522.1| hypothetical protein bmyco0003_34970 [Bacillus mycoides Rock3-17]
 gi|229006470|ref|ZP_04164123.1| hypothetical protein bmyco0002_33810 [Bacillus mycoides Rock1-4]
 gi|228754783|gb|EEM04175.1| hypothetical protein bmyco0002_33810 [Bacillus mycoides Rock1-4]
 gi|228760814|gb|EEM09777.1| hypothetical protein bmyco0003_34970 [Bacillus mycoides Rock3-17]
          Length = 186

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 63/199 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  +++GK+     +  G+ +  TP     I       
Sbjct: 17  WPLGDNPRAGDPFIIVNKQTNKLAYIDDGKIQKVFPIATGKTNELTPEGSFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             ++P Y+  +                                 
Sbjct: 73  -----------------AKNPYYIAKD------------------------------IPG 85

Query: 303 G-KINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F +R+       +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARDTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKTRK 376
              P  ++  I +  +T +
Sbjct: 141 DRIPIGTKVWIVKSKRTFQ 159


>gi|254472343|ref|ZP_05085743.1| protein ybis [Pseudovibrio sp. JE062]
 gi|211958626|gb|EEA93826.1| protein ybis [Pseudovibrio sp. JE062]
          Length = 203

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 55/192 (28%), Gaps = 42/192 (21%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D+   +       +     +    R             ++++     L  V++    +R 
Sbjct: 34  DTRQWDIFPDTPAMASSSARRKYKRKLITYRTNEKPGTIIIDTDKRYLYHVQDNGKAMRY 93

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR   +      RI R    P W  P  + +++     R  P+Y+           
Sbjct: 94  GIGVGREGFE-WNGTERITRKAKWPGWTPPEEMRRRE-AKKGRILPRYM----------- 140

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
                                    G  N + +  +        Y +H T E     +  
Sbjct: 141 -----------------------KGGPENPLGARALYL--GATIYRIHGTTEDWSIGH-- 173

Query: 337 RFETSGCVRVRN 348
              +SGC+R+ N
Sbjct: 174 -AVSSGCIRMFN 184


>gi|293393015|ref|ZP_06637332.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera DSM 4582]
 gi|291424549|gb|EFE97761.1| ErfK/YbiS/YcfS/YnhG family protein [Serratia odorifera DSM 4582]
          Length = 306

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 65/226 (28%), Gaps = 62/226 (27%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+      + +++N     L     G    +   + +G++ + TP+   + + R    P 
Sbjct: 91  LILPDAPRQGIIINSAEMRLYYYPKGSNTVVVLPIGIGQLGKDTPLNWVTSVQRKKDGPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W  P + ++++                                   + +          G
Sbjct: 151 WT-PTAKMREE----------------------------------YAADGEILPAVFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GCVR+R   D+  +L    P  
Sbjct: 176 PDNPMGLYALYVGRLYAI--HGTNAN--FGIGLR-VSHGCVRLR-ADDI-KYLFDSVPVG 228

Query: 364 SR-YHIEEVVK-----------------TRKTTPVKLATEVPVHFV 391
           +R   I E VK                 +     +K    VPV   
Sbjct: 229 TRVQFINEPVKASVEPDGSRYLEVHNPLSANEEELKSKDPVPVTIT 274


>gi|302873222|ref|YP_003841855.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307688611|ref|ZP_07631057.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302576079|gb|ADL50091.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 508

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 26/154 (16%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
               +      E + E   ++    FD               +  + T      A    +
Sbjct: 120 AASALKLGSSGEAVKELQVNLTKLGFDTKGTDG---------VFGQNTYNAVV-AFQNSR 169

Query: 87  DILSRGGWP--------------ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            + + G                   P   L +G+S   V +L+  L   G    + G   
Sbjct: 170 GLTADGIVGLNTKNAIDTAISALNNPSLALKIGSSGDEVIQLQVNLTRLGY--DTNGADG 227

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            F      AV  FQ   GL   G+V ++T  A+ 
Sbjct: 228 VFGQNTYDAVVAFQTAKGLTADGIVGAATKNAIT 261



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 72/236 (30%), Gaps = 31/236 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L LG+S  +V+ L+  L   G    +KG    F     +AV  FQ   GL   G+V
Sbjct: 120 AASALKLGSSGEAVKELQVNLTKLGF--DTKGTDGVFGQNTYNAVVAFQNSRGLTADGIV 177

Query: 158 DSSTLEAMNV---------------PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
             +T  A++                     + QLQVNL R+    +          N   
Sbjct: 178 GLNTKNAIDTAISALNNPSLALKIGSSGDEVIQLQVNLTRL--GYDTNGADGVFGQNTYD 235

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY-WVIPRSIIQKDMMALLRQ 261
           A         V  ++   +           + I   + N        S  Q+  +     
Sbjct: 236 A--------VVAFQTAKGLTADGIVGAATKNAITEALKNVGTSNNNTSSSQQIALKKALA 287

Query: 262 DPQYLKDNNIHMIDEK--GKEVFVEEVDWNSPEPPNFI-FRQDPGKINAMASTKIE 314
                + +    +     G+ + V  + WN  +       R+   + NA+      
Sbjct: 288 ITSSFEGSGFVNVTGNFDGQGISVGALQWNIGQGSLQPLLRRMDTENNALTRQIFG 343



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRE 116
            +   +       + +T  +T+ A A    + +      L     L  G++   V  L+ 
Sbjct: 8   SISALLSGTSNTSATKTANETKTATATANLVAAASTSDSLSISGTLQKGSTGQEVMDLQN 67

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L   G    +  +   F    +SAV  FQ   GL   G+V + T  A++
Sbjct: 68  ALKKLGYF--TSTVDGDFGDLTKSAVIKFQAAKGLTQDGIVGTETKAAIS 115


>gi|220931432|ref|YP_002508340.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
 gi|219992742|gb|ACL69345.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
          Length = 229

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            + + G + EL  R L  G+    V  L+ +L           +   F    E AVKLFQ
Sbjct: 24  KVEASGYYMELGTRILKKGDEGPDVAILQRKLKELNLY--RGKIDGIFGPGTEKAVKLFQ 81

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
            ++ L   G+V   T   +  
Sbjct: 82  EKNKLKVDGIVGPGTYSKLPK 102


>gi|329922685|ref|ZP_08278237.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
 gi|328942027|gb|EGG38310.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
          Length = 114

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 293 PPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
           P N+    + P       +  +     +   +H T +P       R  + GC+R+   ++
Sbjct: 42  PGNYTIVNKQPNPGGPFGAYWLGLSKPH-YGIHGTNDPSSIG---RSVSHGCIRMYNEDV 97

Query: 350 IDLDVWLLKDT 360
           ++L   +   T
Sbjct: 98  VELASLVPIHT 108


>gi|282555154|gb|ADA82673.1| L,D-transpeptidase [endosymbiont of Polyrhachis macropus]
          Length = 309

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPY 243
           L+        +++N     L    +N    +   + +G +   TP    + + R   NP 
Sbjct: 90  LILPNTPHEGIIINSAEMRLYFYPKNSNKIIVFPIGIGEIGNNTPFNWVTSVQRKKHNPV 149

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W IP   I+ + +                                   +          G
Sbjct: 150 W-IPTKKIRDEYL----------------------------------IQGTILPKIIASG 174

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  + GC+R+R   D+  +L ++ P  
Sbjct: 175 PHNPMGLYALYIGKLYAI--HGTNAN--FGIGLR-ISHGCIRLR-ADDI-KYLFQNVPLG 227

Query: 364 SRYHI 368
           +R   
Sbjct: 228 TRVQF 232


>gi|222529549|ref|YP_002573431.1| spore cortex-lytic enzyme [Caldicellulosiruptor bescii DSM 6725]
 gi|222456396|gb|ACM60658.1| spore cortex-lytic enzyme [Caldicellulosiruptor bescii DSM 6725]
          Length = 225

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +++RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQKRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNVPVDLR 172
           + +    R
Sbjct: 99  LGIVTTTR 106


>gi|24113382|ref|NP_707892.1| hypothetical protein SF2058 [Shigella flexneri 2a str. 301]
 gi|30063442|ref|NP_837613.1| hypothetical protein S2168 [Shigella flexneri 2a str. 2457T]
 gi|24052400|gb|AAN43599.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30041695|gb|AAP17422.1| hypothetical protein S2168 [Shigella flexneri 2a str. 2457T]
 gi|281601448|gb|ADA74432.1| putative exported protein ErfK [Shigella flexneri 2002017]
          Length = 311

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +I ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|313649766|gb|EFS14189.1| hypothetical protein SF2457T_1734 [Shigella flexneri 2a str. 2457T]
 gi|332756943|gb|EGJ87287.1| hypothetical protein SFK671_2511 [Shigella flexneri K-671]
 gi|332759868|gb|EGJ90169.1| hypothetical protein SF274771_1174 [Shigella flexneri 2747-71]
 gi|332766515|gb|EGJ96723.1| L,D-transpeptidase ErfK [Shigella flexneri 2930-71]
 gi|333017362|gb|EGK36679.1| hypothetical protein SFK304_2659 [Shigella flexneri K-304]
          Length = 310

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +I ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNIRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|308068757|ref|YP_003870362.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
 gi|305858036|gb|ADM69824.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
          Length = 112

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           ++  L     YLKD +  ++      V + ++   +P     I  + P       +  + 
Sbjct: 6   IVVDLSDRRLYLKDGDQIVLSY---PVGIGKLATQTPHGQFTIINKQPNPGGPFGAFWMG 62

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
               +   +H T EP          + GC+R++N  +++L   +   TP
Sbjct: 63  LSKPH-YGIHGTNEPWSIGK---LVSHGCIRMQNKDVLELQEKVSIGTP 107


>gi|294499183|ref|YP_003562883.1| autolytic lysozyme [Bacillus megaterium QM B1551]
 gi|294349120|gb|ADE69449.1| autolytic lysozyme [Bacillus megaterium QM B1551]
          Length = 433

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 14/161 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+S ++V+ L++ L   G      G    +     +AVK FQ ++GL  +G  
Sbjct: 220 PSAQLQQGDSGLAVKELQQNLTKLGFDLSQHGTDGQYGNETTAAVKAFQEKYGLTSTGKA 279

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D  TL  M   +      ++ +L ++  L     G +Y         +E  +   V    
Sbjct: 280 DERTLAKMMELLKGISNPIEESLPKVTSL-----GDKYSFQVKAKKDIEVYKYANVTENF 334

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII-QKDMMA 257
             I     ++  I             W +P   +  KD+  
Sbjct: 335 RTI-----KKDTIFSVYGYT---YAAWAVPGGFVQIKDVEP 367


>gi|167770795|ref|ZP_02442848.1| hypothetical protein ANACOL_02146 [Anaerotruncus colihominis DSM
           17241]
 gi|167666835|gb|EDS10965.1| hypothetical protein ANACOL_02146 [Anaerotruncus colihominis DSM
           17241]
          Length = 286

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+++++RL   G       +   F    + AV  FQ ++GL   G+  ++TL
Sbjct: 95  KTGSRGNEVRQIQQRLKNWGYYTGE--VDGIFGVETKKAVMSFQRKNGLTVDGIAGNATL 152

Query: 163 EAMNVPVDL 171
           +AM +    
Sbjct: 153 KAMGIQSSQ 161


>gi|291570839|dbj|BAI93111.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 225

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+SS  V  L+ +L   G           F      AVK FQ  +GL   G+   
Sbjct: 160 KSLSHGDSSSRVANLQHKLAYYGYFHARAT--GYFGPITTKAVKAFQRDYGLRVDGVAGP 217

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 218 ATLAALGM 225



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +T  A
Sbjct: 67  GSSGNHVVQLQNALANHGYF--RARSTGYFGSMTKHSVKAFQRDYGLAVDGIVGPATASA 124

Query: 165 MN 166
           + 
Sbjct: 125 LG 126


>gi|56965297|ref|YP_177029.1| hypothetical protein ABC3535 [Bacillus clausii KSM-K16]
 gi|81365181|sp|Q5WC42|YKUD_BACSK RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
           protein YkuD homolog
 gi|56911541|dbj|BAD66068.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 165

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 10/135 (7%)

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           + + +  P    P +I  +  ++L +     L + ++  I      + V ++   +P   
Sbjct: 40  VGQSIVIPGLPNPNTIPYEIHVSLSQHQLTLLHNGSVVKIY----PIAVGKMLTQTPTGN 95

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
             I  + P       +  +     +   +H T +P          + GC+R+ N      
Sbjct: 96  FVIVNKAPNPGGPFGTMWMSLSKLH-YGIHGTNDPSSIGKS---VSHGCIRMHNKD--VE 149

Query: 355 WLLKDTPTWSRYHIE 369
            L    P  +R  IE
Sbjct: 150 ELAATVPIGTRVRIE 164


>gi|149181895|ref|ZP_01860384.1| hypothetical protein BSG1_07801 [Bacillus sp. SG-1]
 gi|148850434|gb|EDL64595.1| hypothetical protein BSG1_07801 [Bacillus sp. SG-1]
          Length = 167

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 48/146 (32%), Gaps = 14/146 (9%)

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP    P  I+ K     +         +   +   +  ++  + +     +  +  +R
Sbjct: 19  KNPLPGDPFLIVNKQ-TNKIAYIQGEEIRHQYSVATGRTDDLTPQGLFTIIVKAKDPYYR 77

Query: 300 QD--PG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIID 351
           +   PG    N + +  + F           +H T           + ++GC+R+ N   
Sbjct: 78  KSDIPGGSPDNPLGTRWMGFDAEGTDGRTYGIHGTNNDDSIGK---YISNGCIRMHNAE- 133

Query: 352 LDVWLLKDTPTWSRYHIEEVVKTRKT 377
               L    P+ ++  I +  K+ + 
Sbjct: 134 -VETLFDRVPSGTKILIVKTGKSFEE 158


>gi|302544645|ref|ZP_07296987.1| lipoprotein [Streptomyces hygroscopicus ATCC 53653]
 gi|302462263|gb|EFL25356.1| lipoprotein [Streptomyces himastatinicus ATCC 53653]
          Length = 211

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 4/144 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V+ L+ RL   G  D +      F     ++V  +Q   GL  +G VDS T  +
Sbjct: 9   GTSGERVRELQARLRRLGHFDRNPT--GYFGTVTRASVTSYQRARGLSATGSVDSRTWTS 66

Query: 165 MNVPVD--LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +        R          + K   + +  R + ++  + +L  + NG+V     V  G
Sbjct: 67  LRSRTARPTRDELYPPTTNPLAKPDSRCLTGRVLCISKSSRTLAWMINGRVVSAMDVRFG 126

Query: 223 RVDRQTPILHSRINRIMFNPYWVI 246
                T     ++N    +    I
Sbjct: 127 SQYTPTREGLFQVNFKSRDHVSTI 150


>gi|295400954|ref|ZP_06810929.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976956|gb|EFG52559.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
          Length = 452

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 79/272 (29%), Gaps = 42/272 (15%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG------------IDSDIPIIS---K 72
                  +    + E    +    F  + A                     +P+      
Sbjct: 27  AAEWKVGMSAPQVKELQQLLKEKGFFTYPAATGYFGTITEQAVKAFQASVRLPVTGVVDD 86

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            T A+ ++A A                  + +G+    V+ L++ L   G       ++ 
Sbjct: 87  ATYAKLKEAAAR-------------RTAEMKIGSRGNDVKVLQQNLKQLGYFK-YPEITG 132

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-----MNVPVDLRIRQLQVNL-----MR 182
            +    + AVK FQ  +GL  +G+ D+ T+++     MN       ++  + +       
Sbjct: 133 YYGTITQDAVKRFQQNYGLPVTGIADARTVQSIQNEVMNRRPAQIAQEYVLAIGSQGAEV 192

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            K     K    +    I         +     +    +    +      ++IN  +   
Sbjct: 193 SKLQQNLKQLGYFTYPKITGYYGTVTADAVRQFQKRYSLPATGKADSQTLAKINEAVAGS 252

Query: 243 YWVIPRSIIQKDM---MALLRQDPQYLKDNNI 271
               P++ I+  +      +++    LK    
Sbjct: 253 KTPAPKAAIRLTIGSTGPEVKKVQTKLKQLGY 284



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
              +P   K       + +A   + ++    P       L +G++   V++++ +L   G
Sbjct: 228 RYSLPATGKAD----SQTLAKINEAVAGSKTPAPKAAIRLTIGSTGPEVKKVQTKLKQLG 283

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-MNVPVDLRIRQLQV 178
               S  ++  + +    AVK FQ   G+  +G+VD+ T E  M      ++  + +
Sbjct: 284 YFTHS-EITGYYGSITAEAVKQFQKSAGIKATGVVDAETYERLMGQAPQKKLDAIAL 339


>gi|261405715|ref|YP_003241956.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
 gi|261282178|gb|ACX64149.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
          Length = 112

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 293 PPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
           P N+    + P       +  +     +   +H T +P       R  + GC+R+   ++
Sbjct: 40  PGNYTIVNKQPNPGGPFGAYWLGLSKPH-YGIHGTNDPSSIG---RSVSHGCIRMYNEDV 95

Query: 350 IDLDVWLLKDT 360
           ++L   +   T
Sbjct: 96  VELASLVPIHT 106


>gi|21228276|ref|NP_634198.1| hypothetical protein MM_2174 [Methanosarcina mazei Go1]
 gi|20906735|gb|AAM31870.1| conserved protein [Methanosarcina mazei Go1]
          Length = 309

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 4/158 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S  +V++++E LI      P  G +  F    E AV+ +Q   GL   G++ S
Sbjct: 28  RVLRRGDSGPAVKKIQEALIFLEIPVPGAGANGIFGDETELAVRSYQEARGLKVDGVIGS 87

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T+ +++      + +  V+      + E    L+      P      VE         V
Sbjct: 88  ETIGSLDEEFPGVVEKTPVSSATEPYVSEVPTPLKPTPPVKP-PRASPVE---PVKAPDV 143

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
              +  R   +    +          +   I+    + 
Sbjct: 144 PPVKAPRAPKVGVPPLKIPQPPGVPTVEPPIMTTQAVP 181


>gi|302871645|ref|YP_003840281.1| spore cortex-lytic enzyme [Caldicellulosiruptor obsidiansis OB47]
 gi|302574504|gb|ADL42295.1| spore cortex-lytic enzyme [Caldicellulosiruptor obsidiansis OB47]
          Length = 225

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  ++ RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQRRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNVPVDLR 172
           + +    R
Sbjct: 99  LGIVTTTR 106


>gi|312109409|ref|YP_003987725.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
 gi|311214510|gb|ADP73114.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
          Length = 452

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 79/272 (29%), Gaps = 42/272 (15%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG------------IDSDIPIIS---K 72
                  +    + E    +    F  + A                     +P+      
Sbjct: 27  AAEWKVGMSAPQVKELQQLLKEKGFFTYPAATGYFGTITEQAVKAFQASVRLPVTGVVDD 86

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            T A+ ++A A                  + +G+    V+ L++ L   G       ++ 
Sbjct: 87  ATYAKLKEAAAR-------------RTAEMKIGSRGNDVKVLQQNLKQLGYFK-YPEITG 132

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-----MNVPVDLRIRQLQVNL-----MR 182
            +    + AVK FQ  +GL  +G+ D+ T+++     MN       ++  + +       
Sbjct: 133 YYGTITQDAVKRFQQNYGLPVTGIADARTVQSIQNEVMNRRPAKIAQEYVLAIGSQGAEV 192

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
            K     K    +    I         +     +    +    +      ++IN  +   
Sbjct: 193 SKLQQNLKQLGYFTYPKITGYYGTVTADAVRQFQKRYSLPATGKADSQTLAKINEAVAGS 252

Query: 243 YWVIPRSIIQKDM---MALLRQDPQYLKDNNI 271
               P++ I+  +      +++    LK    
Sbjct: 253 KTPAPKAAIRLTIGSTGPEVKKVQTKLKQLGY 284



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 48/117 (41%), Gaps = 7/117 (5%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISG 122
              +P   K       + +A   + ++    P       L +G++   V++++ +L   G
Sbjct: 228 RYSLPATGKAD----SQTLAKINEAVAGSKTPAPKAAIRLTIGSTGPEVKKVQTKLKQLG 283

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA-MNVPVDLRIRQLQV 178
               S  ++  + +    AVK FQ   G+  +G+VD+ T E  M      ++  + +
Sbjct: 284 YFTHS-EITGYYGSITAEAVKQFQKSAGIKATGVVDAETYERLMGQAPQKKLDAIAL 339


>gi|295838581|ref|ZP_06825514.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Streptomyces sp. SPB74]
 gi|295827071|gb|EDY44726.2| ErfK/YbiS/YcfS/YnhG superfamily protein [Streptomyces sp. SPB74]
          Length = 196

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVD 170
            L+ RL   G           F      A+  FQ   GL  SG++D+ T   +    P  
Sbjct: 3   ALQARLWSLGFFRQQPT--GYFGEVTARALAAFQRDRGLGASGVLDAVTWGRLRAAGPAP 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            +        +       +    R + V+  + +L  + +G+V     V  G     T  
Sbjct: 61  TKAELYPETTLPPTDPDPRCRTGRALCVSKKSRTLSWMVDGRVVSVMDVRFGSAYTPTRD 120

Query: 231 LHSRINRIMFNPYWV 245
              ++     +    
Sbjct: 121 GTFKVYWKSRDHVST 135


>gi|223984154|ref|ZP_03634305.1| hypothetical protein HOLDEFILI_01598 [Holdemania filiformis DSM
           12042]
 gi|223963886|gb|EEF68247.1| hypothetical protein HOLDEFILI_01598 [Holdemania filiformis DSM
           12042]
          Length = 262

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P   +  G+ +  V   ++ L   G   P   +S  FDA ++ AV+ FQ  HGL   G+
Sbjct: 180 VPFTQIQKGDKNTEVCVAQDALWALGY--PITKISGVFDAELDQAVRAFQRDHGLVADGI 237

Query: 157 VDSSTLEAM 165
           +   T EA+
Sbjct: 238 LGKLTWEAL 246


>gi|15614028|ref|NP_242331.1| hypothetical protein BH1465 [Bacillus halodurans C-125]
 gi|10174082|dbj|BAB05184.1| BH1465 [Bacillus halodurans C-125]
          Length = 170

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 59/185 (31%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   +G  +++VNI    L  V+ GK+     +  G+   +TP+    I       
Sbjct: 18  WPIGPNPTVGDPFLIVNIATNRLAYVDEGKIQKIVPIATGKPSDKTPVGLFTIT------ 71

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                           ++ +  Y +  NI                               
Sbjct: 72  ----------------VKAEQPYYRKKNIA----------------------------GG 87

Query: 303 GKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
              N + +  + F +++       +H T  P       R+ T+GC+R++N  + +L   +
Sbjct: 88  DPKNPLGTRWLGFDAKDTEGRTYGIHGTNRPESIG---RYVTAGCIRLQNKEVEELYANI 144

Query: 357 LKDTP 361
              T 
Sbjct: 145 PLGTK 149


>gi|78046052|ref|YP_362227.1| putative lytic enzyme [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78034482|emb|CAJ22127.1| putative lytic enzyme [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 584

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 4/87 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGL 151
           P      L  G++S  V +L++ L   G  D           F      AV  FQ +HGL
Sbjct: 385 PASGTSALRHGDNSQDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVMAFQKQHGL 444

Query: 152 DPSGMVDSSTLEAM-NVPVDLRIRQLQ 177
              G+V   T  A+   P   R  Q+ 
Sbjct: 445 QQDGVVGRDTRAALAAQPAQTREAQVA 471


>gi|152976556|ref|YP_001376073.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152025308|gb|ABS23078.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 169

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 55/197 (27%), Gaps = 63/197 (31%)

Query: 185 KLLEQKM--GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
             L      G  +++VN     L  + +GK+     +  G+ +  TP     I       
Sbjct: 17  WPLGDNPRVGDPFIIVNKENNKLAYINDGKIQNMFPIATGKTNELTPEGTFDIVMK---- 72

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                             ++P Y+  N                                 
Sbjct: 73  -----------------AKNPYYIAKN------------------------------IPG 85

Query: 303 G-KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
           G   N + S  + F       +   +H T +P        + + GC+R++       +L 
Sbjct: 86  GSPKNPLGSRWMGFNARGTDGSKYGIHGTNQPSSIGK---YISQGCIRMKKHD--VEYLF 140

Query: 358 KDTPTWSRYHIEEVVKT 374
              P  ++  I +  K+
Sbjct: 141 DRVPIGTKVWIVKSKKS 157


>gi|284053940|ref|ZP_06384150.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 160

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 63  IDSDI-PIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---------LHLGNSSVSVQ 112
           +DS   P   +  I            ++ R  W  L   P         +  G+    V+
Sbjct: 45  VDSLFGPRTERALINFQLSKGLRPTGVVDRSTWQALSKDPHQQTIAETLIKQGDRGSKVK 104

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L+ RL ++G       +   F     +AV  FQ+  GL+ +G+VD  T + + 
Sbjct: 105 TLQTRLELTGH--DPGPVDGIFGPKTLAAVSDFQLAMGLESTGVVDDKTWKVLG 156



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G   V V  L++RL + G       +   F    E A+  FQ+  GL P+G+VD S
Sbjct: 18  TLARGTQGVQVAGLQQRLEVHGF--SVGRVDSLFGPRTERALINFQLSKGLRPTGVVDRS 75

Query: 161 TLEAMNVPV 169
           T +A++   
Sbjct: 76  TWQALSKDP 84


>gi|22298230|ref|NP_681477.1| hypothetical protein tsr0688 [Thermosynechococcus elongatus BP-1]
 gi|22294409|dbj|BAC08239.1| tsr0688 [Thermosynechococcus elongatus BP-1]
          Length = 84

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSR--NNTYMHDTPEPILFNNVVRFETSGCV 344
           D     P            N +    I F+S   N   +H TP P    +     + GCV
Sbjct: 4   DPAWKNPFTGAVIAGGHPQNPLGRRWIGFWSDGTNWVGLHGTPNPDSIGH---AVSHGCV 60

Query: 345 RVRN--IIDLDVWLLKDTP 361
           R+ N  I +L   +    P
Sbjct: 61  RMYNRDIEELFEKVQLGVP 79


>gi|147679188|ref|YP_001213403.1| hypothetical protein PTH_2853 [Pelotomaculum thermopropionicum SI]
 gi|146275285|dbj|BAF61034.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 269

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V R+++RL   G    +  L   +      AV+ FQ+ +GL P G+V  +T +A
Sbjct: 77  GTSGDDVYRVQQRLSQWGYY--TGPLDGFYGYETFRAVQDFQINNGLPPDGVVGQATWDA 134

Query: 165 MNVPVDLRIRQLQVNLMRIKK 185
           + + V      +       + 
Sbjct: 135 LGLSVPEAAPAVSRGAATDRG 155


>gi|78214188|ref|YP_382967.1| hypothetical protein Syncc9605_2687 [Synechococcus sp. CC9605]
 gi|78198647|gb|ABB36412.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 199

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 43/165 (26%), Gaps = 68/165 (41%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           +  L  +E+G++ LR    VG    +TP+   R      +P W  P              
Sbjct: 65  SRQLILLEHGQLRLRVPAAVGTQGWETPLGEHRALFKAVDPVWRHP-------------- 110

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF----YS 317
                           G  V                    PG  N + S  I F     +
Sbjct: 111 --------------GTGALV-------------------PPGGRNPLGSRWIVFYQDCSN 137

Query: 318 RNN--------------TYMHDTPEPILFNNVVRFETSGCVRVRN 348
                              +H TP         R  + GCVR+ +
Sbjct: 138 PGGWDGEKVVQVRGCSHVGLHGTPHRWTVG---RAVSHGCVRLYD 179


>gi|312622221|ref|YP_004023834.1| spore cortex-lytic enzyme [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202688|gb|ADQ46015.1| spore cortex-lytic enzyme [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 225

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +++RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQKRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNVPVDLR 172
           + +    R
Sbjct: 99  LGIVTTTR 106


>gi|254473359|ref|ZP_05086756.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
 gi|211957475|gb|EEA92678.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
          Length = 197

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 49/168 (29%), Gaps = 43/168 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +       G   ++++     L  +      +   V VGR   Q      RI R    
Sbjct: 52  RKQVRYNGSYGPNTIVISTKDRRLYHIRGNGTAMVYGVGVGREGFQ-WAGTHRITRKAEW 110

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P+ +I+++                                           F   
Sbjct: 111 PSWTPPKVMIERE------------------------------------RRKGRISFFMK 134

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +   S    Y +H + EP    +     +SGC+R+ N
Sbjct: 135 GGPNNPLGARAMYIGS--TIYRIHGSNEPWTIGS---AVSSGCIRMAN 177


>gi|121534486|ref|ZP_01666309.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
 gi|121306979|gb|EAX47898.1| NLP/P60 protein [Thermosinus carboxydivorans Nor1]
          Length = 219

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                  G+    +  ++ RL   G       +   F    +SAV  FQ   GL+  G+V
Sbjct: 23  ASGVYEEGDQGPEIAAIQARLRELGY---RLEVDGDFGQATKSAVIAFQKDRGLEADGVV 79

Query: 158 DSSTLEAM 165
            + T  A+
Sbjct: 80  GAQTYRAL 87


>gi|253577644|ref|ZP_04854953.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251842971|gb|EES71010.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 112

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           YL DNN  +   +G  V +  +   +P     I  + P       +  +     +   +H
Sbjct: 16  YLLDNNNVV---RGFPVGIGTMLTQTPVGSYTIVNKAPNPGGPFGAYWMGLSKPH-YGIH 71

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            T +P          + GC+R+ N    +L   +   T
Sbjct: 72  GTDDPSSIGKE---VSHGCIRMYNPDVIELARIVPIGT 106


>gi|331002315|ref|ZP_08325833.1| hypothetical protein HMPREF0491_00695 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410131|gb|EGG89565.1| hypothetical protein HMPREF0491_00695 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 539

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 14/179 (7%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            + L +     H +     + E    I    ++         I       ++E   + ++
Sbjct: 162 TLPLLMDANAKHYAAKLGDVGEDVKRIQTRMYELGYLASADLITGTYDEKTQEGALKLQQ 221

Query: 81  AIAFYQDILSRGG-------WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
            I    +    G          E+    L LG  S  VQ ++ RL   G L  S      
Sbjct: 222 -INSLSEDGKVGSETMNLLYSDEIKANTLSLGEHSEVVQAIQNRLSELGYLTTSP--DGT 278

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL----RIRQLQVNLMRIKKLLE 188
           +    E AV++FQ ++ L   G +  ST   +          R+      + R++ LL 
Sbjct: 279 YGNDTELAVRVFQSKNDLVVDGYLGPSTRAVILSSEAKANGLRLGDQNEQVERLQSLLA 337



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+ +  V+RL+  L  +G L+ S      F    E+A+K FQ  +GL   G   + T
Sbjct: 320 LRLGDQNEQVERLQSLLAKAGYLNDSNAT-GYFGEITETALKRFQSNNGLSADGRAGAQT 378

Query: 162 LEAMN 166
              +N
Sbjct: 379 FAKLN 383



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     + +++ERL+  G ++  +  +  F     SAV +FQ ++GL   G++  ST
Sbjct: 104 LEEGVQHSYIAKVQERLMELGFMEHDEPTN-YFGNVTRSAVMIFQRQNGLAQDGIIGPST 162

Query: 162 L 162
           L
Sbjct: 163 L 163


>gi|294498419|ref|YP_003562119.1| endopeptidase LytF [Bacillus megaterium QM B1551]
 gi|294348356|gb|ADE68685.1| endopeptidase LytF (cell wall hydrolase) [Bacillus megaterium QM
           B1551]
          Length = 303

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           YQ ++            L  G +S  V+++++ L   G    +   +  F    ++AV  
Sbjct: 88  YQALIGNSTSTVTNGTLLKYGMTSNEVEKVQQLLKDKGYF--NATPTGYFGTVTQTAVMN 145

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  HGL   G+V  +TL A+
Sbjct: 146 FQRDHGLAVDGIVGPATLNAL 166



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G        +  F +  + +V  FQ  H L   G
Sbjct: 24  ALGDKLLKEGMTDPDVKELQDVLRQKGIFS--ATSTGYFGSITKDSVLSFQRSHSLTADG 81

Query: 156 MVDSSTLEAMNVP 168
           +V S+T +A+   
Sbjct: 82  IVGSNTYQALIGN 94


>gi|238921306|ref|YP_002934821.1| hypothetical protein NT01EI_3450 [Edwardsiella ictaluri 93-146]
 gi|238870875|gb|ACR70586.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 150

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 7/80 (8%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +            G  N M    +          H T     F   +R  + GCVR+R+
Sbjct: 5   YAANGQYLPAVFPAGPDNPMGLYALYVGRLYAV--HGTNAN--FGIGLR-VSHGCVRLRD 59

Query: 349 IIDLDVWLLKDTPTWSRYHI 368
                 WL K+ P  +R   
Sbjct: 60  PD--IKWLFKNVPIGTRVQF 77


>gi|283779427|ref|YP_003370182.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
 gi|283437880|gb|ADB16322.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Pirellula
           staleyi DSM 6068]
          Length = 677

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            +   P +P + L +G+S   V  L+  L           +   +     +AVK FQ+ H
Sbjct: 296 QQSTTPPVP-KTLRIGSSGDLVAALQRTLNAKNPEASRLTVDGDYGPATAAAVKKFQLEH 354

Query: 150 GLDPSGMVDSSTLEAMN 166
            L+ +G +DS T +A+ 
Sbjct: 355 MLNETGEMDSKTWQALG 371


>gi|329122079|ref|ZP_08250687.1| cell wall lytic enzyme [Dialister micraerophilus DSM 19965]
 gi|327466886|gb|EGF12402.1| cell wall lytic enzyme [Dialister micraerophilus DSM 19965]
          Length = 422

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + L +G     +  L+  L+ +G L     +   + +  E AV LFQ   GL  +G 
Sbjct: 20  ISAKTLKIGMKGQEITALQNSLVAAGYLAR--TVDSEYGSTTEKAVSLFQKDKGLTITGE 77

Query: 157 VDSSTLEAMNV 167
            D  TL+A+  
Sbjct: 78  ADEKTLKAIKK 88



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ ++ +L   G LD    +   +    E+AVK  Q + GL  SG +D  T+  
Sbjct: 185 GDVGKDIENIQTKLQEYGYLD--GDIDGIYGNDTETAVKKLQEKSGLAISGSIDEETMRE 242

Query: 165 M 165
           +
Sbjct: 243 L 243



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+S   V  L+ +LI+ G           F    E+AVKLFQ  + L+ +G+ DS  ++
Sbjct: 261 IGDSGTDVGELQNKLILHGY--NPGIADGFFGNDTETAVKLFQKDNNLEVTGIADSVVIK 318

Query: 164 AMNVPV 169
            +    
Sbjct: 319 KLKKAP 324



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 16/162 (9%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIP-- 68
           + + L + +++  K +   +  + I    +S+V   +     D+          S     
Sbjct: 10  LIMCLSVSVNISAKTLKIGMKGQEITALQNSLVAAGYLARTVDSEYGSTTEKAVSLFQKD 69

Query: 69  ---IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
               I+ E   +T KAI   ++   R G   +  +    GN  + V++ ++ L  SG L 
Sbjct: 70  KGLTITGEADEKTLKAIKKAENKGYRNGGGIVYAK----GNLGIEVEKWQKVLYESGCL- 124

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +  +   +     +AV+LFQ  + +  SG +D  TL A+  
Sbjct: 125 -NGDVDGIYGTETFNAVELFQKNNDIPVSGAIDEMTLSALEK 165


>gi|313891696|ref|ZP_07825303.1| peptidoglycan binding domain protein [Dialister microaerophilus
           UPII 345-E]
 gi|313119974|gb|EFR43159.1| peptidoglycan binding domain protein [Dialister microaerophilus
           UPII 345-E]
          Length = 422

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + L +G     +  L+  L+ +G L     +   + +  E AV LFQ   GL  +G 
Sbjct: 20  ISAKTLKIGMKGQEITALQNSLVAAGYLAR--TVDSEYGSTTEKAVSLFQKDKGLTITGE 77

Query: 157 VDSSTLEAMNV 167
            D  TL+A+  
Sbjct: 78  ADEKTLKAIKK 88



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 16/162 (9%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF-----DNFLARVDMGIDSDIP-- 68
           + + L + +++  K +   +  + I    +S+V   +     D+          S     
Sbjct: 10  LIMCLSVSVNISAKTLKIGMKGQEITALQNSLVAAGYLARTVDSEYGSTTEKAVSLFQKD 69

Query: 69  ---IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
               I+ E   +T KAI   ++   R G   +  +    GN  + V++ ++ L  SG L 
Sbjct: 70  KGLTITGEADEKTLKAIKKAENKGYRNGGGIVYAK----GNLGIEVEKCQKVLYESGYL- 124

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +  +   +     +AVKLFQ  + +  SG +D  TL A+  
Sbjct: 125 -NGDVDGIYGTETFNAVKLFQKNNDIPVSGAIDEMTLSALEK 165



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ ++ +L   G LD    +   + +  E+AVK  Q + GL  SG +D  T+  
Sbjct: 185 GDVGKDIENIQTKLQEYGYLD--GDIDGIYGSDTENAVKKLQEKSGLAISGSIDEETMRE 242

Query: 165 M 165
           +
Sbjct: 243 L 243



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+S   V  L+ +LI+ G           F    E+AVKLFQ  + L+ +G+ DS  ++
Sbjct: 261 IGDSGTDVGELQNKLILHGY--NPGIADGFFGNDTETAVKLFQKDNNLEVTGIADSVVIK 318

Query: 164 AMNVPV 169
            +    
Sbjct: 319 NLKKAP 324


>gi|319653745|ref|ZP_08007842.1| hypothetical protein HMPREF1013_04460 [Bacillus sp. 2_A_57_CT2]
 gi|317394588|gb|EFV75329.1| hypothetical protein HMPREF1013_04460 [Bacillus sp. 2_A_57_CT2]
          Length = 266

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V +++ +L  +G  + +  L   +     SAVK FQ + GL   G+   
Sbjct: 97  KVLRYGDIGKQVIQIQYQLKQTGHYESN--LDGIYGNGTVSAVKSFQKQQGLTADGIAGP 154

Query: 160 STLEAMNVPVD 170
            T   ++    
Sbjct: 155 RTRAELDRKAK 165



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G+S   V  L++ L+  G        +  + +    AVK FQ +  L   G
Sbjct: 28  ALGDRTLANGSSGSDVAELQDYLMTKGVFP-YHTSTGYYGSITVEAVKDFQRKRHLKVDG 86

Query: 156 MVDSSTLEAMNV 167
           +  S T  A+ V
Sbjct: 87  IAGSQTSHALKV 98


>gi|290967813|ref|ZP_06559366.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290782172|gb|EFD94747.1| 3D domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 170

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S  +VQRL+  LI +G L    G    F A    AV  FQ   GLD  G+V + TL A
Sbjct: 4   GMSGAAVQRLQYMLIDAGYLS--DGADGVFGAATRDAVTRFQAAKGLDADGVVGTRTLTA 61

Query: 165 MNVPVDLRIRQLQVNLMRIK 184
           +      +      N+   +
Sbjct: 62  LAETGKKKTNNSAQNIWGKR 81


>gi|254416303|ref|ZP_05030057.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196176985|gb|EDX71995.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 320

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+    V  +++RL   G  D        F      AV+ FQ   GL P G+V 
Sbjct: 59  AQTLQPGSRGSQVIEIQQRLRELGYFDQQPT--GYFGPITTEAVQQFQRSQGLIPDGIVG 116

Query: 159 SST 161
             T
Sbjct: 117 QRT 119



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  L+ +L  +G       +   +    ++AV+ FQ  + L P G+ + 
Sbjct: 182 RELRPGDRGQEVFELQLKLRQAGF--DPGRVDGIYGFQTQNAVEQFQEANNLFPDGVANQ 239

Query: 160 STLEAMN 166
            TL+A+ 
Sbjct: 240 DTLQALG 246


>gi|297545285|ref|YP_003677587.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843060|gb|ADH61576.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 333

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+ S  V  L+ RL           +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDRSPFVVSLQARLKSL--YFDPGPIDGIFGRKTEEAVKAYQQSRGLSVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|296392456|ref|YP_003657340.1| cell wall hydrolase/autolysin [Segniliparus rotundus DSM 44985]
 gi|296179603|gb|ADG96509.1| cell wall hydrolase/autolysin [Segniliparus rotundus DSM 44985]
          Length = 402

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 22/130 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV---------------------AFDAYVES 140
           L  G+    V  +R  L   G L  S G                         FDA ++ 
Sbjct: 4   LRRGDIGPEVVAVRAILEELGFLRSSNGSPDQGAAHDGLTPDASGQEARVEALFDAELDL 63

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV+ FQ   G+   G++  +T          R+     +      ++   +      ++ 
Sbjct: 64  AVRAFQQHRGMLVDGIIGPAT-SQCLREASFRLGARVTSYQPSAPMVGDDVADLQARLHD 122

Query: 201 PAASLEAVEN 210
               +  V+ 
Sbjct: 123 LGFYMGLVDG 132



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G       +   F     + +  +Q   GL P G+   +TL ++
Sbjct: 108 MVGDDVADLQARLHDLGFYM--GLVDGYFGPKTHNGLMSYQREFGLTPDGICGPATLRSL 165

Query: 166 N 166
           N
Sbjct: 166 N 166


>gi|187939515|gb|ACD38663.1| putative peptidoglycan-binding domain-containing protein
           [Pseudomonas aeruginosa]
          Length = 268

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V++L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVRQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAMN 166
           TL A+ 
Sbjct: 60  TLAALG 65


>gi|330898219|gb|EGH29638.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 162

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 23/68 (33%), Gaps = 6/68 (8%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--R 347
           + +          G  N +   K          +H + +   F   +R  + GC R+   
Sbjct: 1   AADGDPLPDVVPAGPDNPLGPFKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNN 56

Query: 348 NIIDLDVW 355
           N+++L   
Sbjct: 57  NVLELADM 64


>gi|312877867|ref|ZP_07737814.1| spore cortex-lytic enzyme [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795371|gb|EFR11753.1| spore cortex-lytic enzyme [Caldicellulosiruptor lactoaceticus 6A]
          Length = 225

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +++RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQKRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNVPVDLR 172
           + +    R
Sbjct: 99  LGIVTTTR 106


>gi|126649562|ref|ZP_01721803.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905]
 gi|126593887|gb|EAZ87810.1| hypothetical protein BB14905_06478 [Bacillus sp. B14905]
          Length = 143

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLK 358
           DP       +  +     +   +H T +P    +     + GC+R++N  + +L   +  
Sbjct: 80  DPNPGGPFGTMWMSLSKEH-YGIHGTNDPSSIGH---AVSHGCIRMQNQDVEELASIVPI 135

Query: 359 DTP 361
            T 
Sbjct: 136 GTE 138


>gi|320007102|gb|ADW01952.1| Peptidoglycan-binding domain 1 protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 126

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   VQ L+  L+  G    S G+   F A  ESAV+ FQ   G+   G+V  +T   
Sbjct: 61  GDSGAKVQELQALLVFKGFSVGSSGVDGQFGAGTESAVRRFQTSRGISSDGVVGPTTWHY 120

Query: 165 MNVP 168
           +  P
Sbjct: 121 LRTP 124


>gi|54027638|ref|YP_121880.1| putative N-acetylmuramoyl-L-alanine amidase [Nocardia farcinica IFM
           10152]
 gi|54019146|dbj|BAD60516.1| putative N-acetylmuramoyl-L-alanine amidase [Nocardia farcinica IFM
           10152]
          Length = 397

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 13/130 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA------------FDAYVESAVKLFQMRH 149
           L  G++  +V  +R  L   G L    G   +            FD +++SAV+ FQ   
Sbjct: 4   LRHGDTGPAVAEVRSTLASLGFLHAHAGSDESQSPEYWKDTEASFDHHLDSAVRAFQQHR 63

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           GL   G+V  +T  A+      R+    +       L    +      +      +  V+
Sbjct: 64  GLLVDGVVGPATYRALKE-ASYRLGARTLIYQLSAPLYGDDVATLQRKLQDLGFYVHRVD 122

Query: 210 NGKVGLRSTV 219
                     
Sbjct: 123 GYFGPHTHDA 132



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 28/159 (17%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-------IAQTEKAIA 83
           +        + E   ++ +  F +  A  D    S  P   K+T       +    +A  
Sbjct: 4   LRHGDTGPAVAEVRSTLASLGFLHAHAGSDE---SQSPEYWKDTEASFDHHLDSAVRAFQ 60

Query: 84  FYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPS 127
            ++ +L  G      +  L      LG                V  L+ +L   G     
Sbjct: 61  QHRGLLVDGVVGPATYRALKEASYRLGARTLIYQLSAPLYGDDVATLQRKLQDLGFYVHR 120

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             +   F  +   A+  FQ   GL   G+    TL ++ 
Sbjct: 121 --VDGYFGPHTHDALTAFQREIGLSADGICGPDTLRSLE 157


>gi|330000830|ref|ZP_08303844.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
 gi|328537852|gb|EGF64042.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
          Length = 313

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 100 IVINVAEMRLYYYPPQGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 159 E----------------------------------YAKEGKTLPAMVPPGPDNPMGLYAI 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 185 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 229


>gi|41410439|ref|NP_963275.1| CwlM [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118465835|ref|YP_884413.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium 104]
 gi|41399273|gb|AAS06891.1| CwlM [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118167122|gb|ABK68019.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium
           104]
          Length = 406

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
               +        + E   ++ +                    +    + Q  +A   ++
Sbjct: 8   YGDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHR 67

Query: 87  DILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGL 130
            +L  G      +  L      LG                V  L+ RL   G    +  +
Sbjct: 68  GLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLV 125

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F     +A+  +Q  +GL   G+    TL ++
Sbjct: 126 DGYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|328954552|ref|YP_004371886.1| Peptidoglycan-binding domain 1 protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328454876|gb|AEB10705.1| Peptidoglycan-binding domain 1 protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 524

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 12/179 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY--HSIVNDRFDNFLARVDMGIDSDIPIISKETIA- 76
           +   L L  K      L + + +       ++  FD+      +       +++   +  
Sbjct: 179 VAQALQLGAKGSEVLELQKRLKDLRFDPGRLDGVFDSGTEAAVVAFQKSEDLLADGIVGP 238

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           +T  A+   +   + G         L +G S   V+ L+++L   G       L   F  
Sbjct: 239 KTLAALELAETEEAAG-----ETLLLQVGASGPHVEALQKQLAALGF--DPGPLDGVFGE 291

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEA--MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
             E AV  FQ    LD  G+    T+ A  +  P     + L +       L+ +    
Sbjct: 292 KTERAVLAFQESRELDADGIAGPQTMAALSLQAPPIQPAKALGLAPDVTVDLVAEMFPD 350


>gi|299535205|ref|ZP_07048529.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1]
 gi|298729326|gb|EFI69877.1| spore protein ykuD-like protein [Lysinibacillus fusiformis ZC1]
          Length = 164

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLK 358
            P       +  +     +   +H T +P    +     + GC+R++N  + +L   +  
Sbjct: 101 APNPGGPFGTMWMSLSKEH-YGIHGTNDPSSIGH---AVSHGCIRMQNRDVEELASIVPI 156

Query: 359 DTP 361
            T 
Sbjct: 157 GTE 159


>gi|289668377|ref|ZP_06489452.1| hypothetical protein XcampmN_07730 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 616

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 51/164 (31%), Gaps = 11/164 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
            L +  S   + +  S LD  + E  H+     + +        +  +     +++ A T
Sbjct: 344 QLKISQSRGGEGVELSSLDSYL-ERKHAKGVKLYASDPLSEARDLLQERSQTKQQSHAAT 402

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFD 135
           E   +         G        L        V+ L++ L   G  D           + 
Sbjct: 403 EHKPSQAYAAADASG-------VLRENVCGADVRTLQQTLQQLGYKDAHGHELKPDGVYG 455

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
                AVK FQ  HGL   G+V   T  A+       +   + N
Sbjct: 456 QRTSEAVKAFQRAHGLQDDGVVGRDTQAALRQAEKTPLLSEKTN 499


>gi|254777652|ref|ZP_05219168.1| putative N-acetylmuramoyl-L-alanine amidase [Mycobacterium avium
           subsp. avium ATCC 25291]
          Length = 406

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
               +        + E   ++ +                    +    + Q  +A   ++
Sbjct: 8   YGDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHR 67

Query: 87  DILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGL 130
            +L  G      +  L      LG                V  L+ RL   G    +  +
Sbjct: 68  GLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLV 125

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F     +A+  +Q  +GL   G+    TL ++
Sbjct: 126 DGYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|15808975|gb|AAL08577.1|AF418548_3 N-acetylmuramoyl-l-alanine amidase [Mycobacterium avium subsp.
           paratuberculosis]
          Length = 406

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              L  G+ S +V  +R  L   G L  +              FDA ++ AV+ FQ   G
Sbjct: 9   GDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGIVGEATYRALK 84



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 43/155 (27%), Gaps = 18/155 (11%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
               +        + E   ++ +                    +    + Q  +A   ++
Sbjct: 8   YGDALRCGDRSAAVTEIRATLASLGLLASADEDLSTGRHVALELFDAELDQAVRAFQQHR 67

Query: 87  DILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGL 130
            +L  G      +  L      LG                V  L+ RL   G    +  +
Sbjct: 68  GLLVDGIVGEATYRALKEASYRLGARTLYHQFGAPLYGDDVATLQARLQDLGFY--TGLV 125

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F     +A+  +Q  +GL   G+    TL ++
Sbjct: 126 DGYFGLQTHNALMSYQREYGLSADGICGPETLRSL 160


>gi|886316|gb|AAB53132.1| N-acetymuramyl-L-alanine amidase [Mycobacterium leprae]
          Length = 205

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ + +V  +R  L   G L                 FD  ++ AV+ FQ   G
Sbjct: 9   GDTLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLDDAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGVVGEATHRALK 84



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 18/154 (11%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
              +     +  + E   ++      +               +    +    +A   ++ 
Sbjct: 9   GDTLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLDDAVRAFQQHRG 68

Query: 88  ILSRG-----GWPELPIRPLHLGN-----------SSVSVQRLRERLIISGDLDPSKGLS 131
           +L  G         L      LG            S   V  L+ RL   G    +  + 
Sbjct: 69  LLVDGVVGEATHRALKEASYRLGARTLYHRFGAPLSGDDVATLQARLQDLGFY--TGMVD 126

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 127 GHFGLQTHNALISYQREYGLTADGICGPETLRSL 160


>gi|284993429|ref|YP_003411984.1| cell wall hydrolase/autolysin [Geodermatophilus obscurus DSM 43160]
 gi|284066675|gb|ADB77613.1| cell wall hydrolase/autolysin [Geodermatophilus obscurus DSM 43160]
          Length = 383

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 83  AFYQDILSRG---GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
             Y+ +       G   L   P+        V  L++RL   G    +  +   F    E
Sbjct: 74  ETYRALSEARWSLGDRLLHHDPVRP-MRGDDVTNLQDRLHELGY--DAGPVDGVFGPETE 130

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + ++ FQ  +GL   G    +TL A+  
Sbjct: 131 AGLRAFQRDYGLTSDGTCGPATLRALRQ 158



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA------FDAYVESAVKLFQMRHGLDP 153
           +PL  G+   +V  +   L     L  +     A      +D   E AV+ FQ   GL  
Sbjct: 8   QPLGPGDRGHAVADVHAALRALTLLPAAGSAEEASLDEAAYDPATELAVRHFQQVRGLTV 67

Query: 154 SGMVDSSTLEAMN 166
            G V   T  A++
Sbjct: 68  DGRVGEETYRALS 80


>gi|52081895|ref|YP_080686.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52787285|ref|YP_093114.1| BlyA [Bacillus licheniformis ATCC 14580]
 gi|52005106|gb|AAU25048.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52349787|gb|AAU42421.1| BlyA [Bacillus licheniformis ATCC 14580]
          Length = 359

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 31/66 (46%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L++RLI +G   P  G   ++      AVK  Q + G+   G+   +T
Sbjct: 195 LKKGASGSQVKALQKRLIAAGFSLPKYGADGSYGNETVQAVKALQKKAGIAVDGIYGPAT 254

Query: 162 LEAMNV 167
            +A+  
Sbjct: 255 EKALAA 260



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V +++E L            + G+   +     +AVK FQ+ 
Sbjct: 278 TLPSGIYKVKSPMMKGTAVWQIQEALAALYFYPDKEAKNNGIDGYYGPKTANAVKRFQLM 337

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL   G+    T   +  
Sbjct: 338 HGLSADGIYGPKTKAKIEA 356


>gi|284045118|ref|YP_003395458.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283949339|gb|ADB52083.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 345

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 47/192 (24%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI--PAASLEAVENGKVGLRSTVI 220
            A+    D R  +++  ++R K    Q      V++ +   A  L   +N ++    TV 
Sbjct: 184 RALRRTDDARTVKVRAAVVRPKVTTAQLAKQYPVVITVDRAAFRLSLWKNLRLAKSYTVA 243

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           +G++   TP     I     +P W +P S    D+                      G  
Sbjct: 244 IGQIGLDTPAGLYEIQNKAVDPVWSVPNSAWAGDLA---------------------GTT 282

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V                    PG  N + +  +  +  +   +H T             +
Sbjct: 283 V-------------------PPGPSNPIKARWLGIF--DGAGIHGTDAVYSLGT---AAS 318

Query: 341 SGCVRVRNIIDL 352
            GCVR+     +
Sbjct: 319 HGCVRMAIPDVI 330


>gi|261253884|ref|ZP_05946457.1| general secretion pathway protein A [Vibrio orientalis CIP 102891]
 gi|260937275|gb|EEX93264.1| general secretion pathway protein A [Vibrio orientalis CIP 102891]
          Length = 540

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 26  LVEKPIHASVLDEIINESY----HSIVNDR--FDNFLARVDMGIDSDIPIISKETIAQTE 79
           L    +  + LDE++  +        ++++  F    +     ++  I     + +    
Sbjct: 380 LFRCQLDQASLDELVQANRPVLLSLQIDEQPRFAILYSVSGEQVELLI---GSQLVTFDR 436

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + +A       R  W       L  G S   + +L + L     L   + +S  FD+ V+
Sbjct: 437 QWLASIWQGQYRHIWQSYWSETLKQGMSGEEIAQLDKALSQV--LGEPESVSEYFDSDVK 494

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             V+LFQ   GL   G+    TL  +          L+    ++ 
Sbjct: 495 RKVELFQRWQGLSVDGIAGKKTLRLLEELSQHEAPTLERLEEKLD 539


>gi|320528988|ref|ZP_08030080.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
 gi|320138618|gb|EFW30508.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
          Length = 229

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G           F      AVK FQ  HGL   GMV
Sbjct: 31  SAESFQIGDQGTDVAEIQGQLSSVGY---DVVADGDFGPATAEAVKEFQAAHGLAVDGMV 87

Query: 158 DSSTLEAM 165
             ST EA+
Sbjct: 88  GPSTYEAL 95


>gi|313895511|ref|ZP_07829067.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975637|gb|EFR41096.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 220

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G           F      AVK FQ  HGL   GMV
Sbjct: 22  SAESFQIGDQGTDVAEIQGQLSSVGY---DVVADGDFGPATAEAVKEFQAAHGLAVDGMV 78

Query: 158 DSSTLEAM 165
             ST EA+
Sbjct: 79  GPSTYEAL 86


>gi|17313229|ref|NP_490609.1| hypothetical protein phiCTXp12 [Pseudomonas phage phiCTX]
 gi|4063783|dbj|BAA36237.1| unnamed protein product [Pseudomonas phage phiCTX]
          Length = 268

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V +L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVLQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAMN 166
           TL A+ 
Sbjct: 60  TLAALG 65


>gi|323704291|ref|ZP_08115870.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536357|gb|EGB26129.1| ErfK/YbiS/YcfS/YnhG family protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 387

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 57/221 (25%), Gaps = 81/221 (36%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + VNIP+ ++  V      L   + VG++   +P+   RI     NP WV P        
Sbjct: 31  MTVNIPSRTIYFVSQNMSKL-YPIAVGKIISTSPLGTYRIINKQVNPKWVSP-------- 81

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                           WN             G  N +    + F
Sbjct: 82  --------------------------------WNGE-------VVPSGPDNPLGYRWMGF 102

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
           YS      H    P          +SGC+R+                     + ++V   
Sbjct: 103 YSDYGI--HGNNMPSSIGT---LASSGCIRMYEA--------------DVEELFDMVSYG 143

Query: 376 KTTPVKLATEVPVHFVYISAWSPKD---SIIQF-RDDIYGL 412
                       V+ VY + +        +  F   D Y  
Sbjct: 144 DI----------VNVVYQTIFPKTSPTGGMALFVYPDFYKK 174


>gi|148807399|gb|ABR13472.1| hypothetical protein [Pseudomonas aeruginosa]
          Length = 268

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V++L+ RL        +      F A  E AV+ FQ  HGL   G+    
Sbjct: 2   TLRYGDRSQEVRQLQRRLNTW--AGANLYEDGHFGAATEDAVRAFQRSHGLVADGIAGPK 59

Query: 161 TLEAMN 166
           TL A+ 
Sbjct: 60  TLSALG 65


>gi|297568445|ref|YP_003689789.1| Peptidoglycan-binding domain 1 protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924360|gb|ADH85170.1| Peptidoglycan-binding domain 1 protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 442

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 14/89 (15%)

Query: 94  WPEL-PIRPLHLGNSSVSVQRLRERLIIS-----GDLDPSKGL--------SVAFDAYVE 139
           WP L P   L  G+    V++LR  L        G  +             +  FDA + 
Sbjct: 332 WPPLLPGELLQEGDQGPEVRQLRFLLQQLAAELSGHEEERAAATLAATASGADYFDAELA 391

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  FQ  HGL+  G+V   T   +   
Sbjct: 392 ELVGNFQAAHGLEADGIVGPQTWRQLRRS 420


>gi|251796689|ref|YP_003011420.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
 gi|247544315|gb|ACT01334.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
          Length = 221

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 7/97 (7%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+ RL   G  D +  ++  +    E AV+ FQ  +GL   G+ +  
Sbjct: 36  TLSYGSYGPDVPDLQFRLKTLGYFDNTA-ITTFYGKMTEEAVRKFQADYGLKSDGVAEEK 94

Query: 161 TLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           T   +  V  + +   L       + +  +  G  Y 
Sbjct: 95  TWTQLKKVSANQKELDLL-----ARIIYAEARGESYK 126


>gi|119488069|ref|ZP_01621513.1| Peptidoglycan-binding domain 1 [Lyngbya sp. PCC 8106]
 gi|119455358|gb|EAW36497.1| Peptidoglycan-binding domain 1 [Lyngbya sp. PCC 8106]
          Length = 206

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG    +V  L+ERL   G L         F +  ++AV   Q ++ L P G+V S 
Sbjct: 142 VLKLGMRGEAVVGLQERLRAKGFLKGQA--DGVFGSQTQAAVIAAQEQYKLKPDGVVGSQ 199

Query: 161 TL 162
           T 
Sbjct: 200 TW 201



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L    L  G+    V  L+  L + G       +   +      AV  FQ    L  +G+
Sbjct: 37  LTRPTLQTGSQGTEVFELQAALKLLGYYTGE--VDGVYAESTAEAVSQFQKAANLPVTGV 94

Query: 157 VDSSTLEAMNVPVD 170
            +S+T + +  P +
Sbjct: 95  TNSATWDRLFPPEE 108


>gi|312135357|ref|YP_004002695.1| spore cortex-lytic enzyme [Caldicellulosiruptor owensensis OL]
 gi|311775408|gb|ADQ04895.1| spore cortex-lytic enzyme [Caldicellulosiruptor owensensis OL]
          Length = 226

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  ++ RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQRRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNV 167
           + +
Sbjct: 99  LGI 101


>gi|170760217|ref|YP_001786763.1| zinc carboxypeptidase family protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407206|gb|ACA55617.1| zinc carboxypeptidase family protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 423

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMNV 167
            E +N 
Sbjct: 62  YELLNK 67


>gi|284989789|ref|YP_003408343.1| peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284063034|gb|ADB73972.1| Peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 234

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V   + RL+ +  LD    +   F    E A + FQ  HGL   G+V   T
Sbjct: 167 LRRGDRGAAVATWQWRLVQA--LDRQVDVDEVFGPMTEQATRDFQSAHGLAVDGVVGPRT 224

Query: 162 LEAMNV 167
             AM  
Sbjct: 225 RAAMVR 230


>gi|161502822|ref|YP_001569934.1| hypothetical protein SARI_00873 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864169|gb|ABX20792.1| hypothetical protein SARI_00873 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 309

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPEGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|289579097|ref|YP_003477724.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|289528810|gb|ADD03162.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
          Length = 336

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L +G+ S  V  L+ RL           +   F    E AVK +Q   GL  +
Sbjct: 173 PPIEYPTLKIGDRSPFVVNLQARLKSL--YFDPGPIDGIFGRKTEEAVKAYQQSRGLSVT 230

Query: 155 GMVDSSTLEAM 165
           G+VD+ T  A+
Sbjct: 231 GIVDNVTWNAL 241


>gi|21244359|ref|NP_643941.1| hypothetical protein XAC3634 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110016|gb|AAM38477.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 306

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 29/85 (34%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V+ L++ L   G  D +        A+      AVK FQ  HGL   
Sbjct: 105 APSVLRENARGAEVRTLQQTLQQLGYKDAAGNELKADGAYGQRTSDAVKAFQRAHGLQDD 164

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T  A+       +   + N
Sbjct: 165 GVVGRDTQAALKQAEKTPLLSEKTN 189


>gi|153939521|ref|YP_001390735.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152935417|gb|ABS40915.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           Langeland]
 gi|295318808|gb|ADF99185.1| zinc carboxypeptidase family protein [Clostridium botulinum F str.
           230613]
          Length = 423

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMNV 167
            E +N 
Sbjct: 62  YELLNK 67


>gi|113955394|ref|YP_730733.1| protein erfK/srfK precursor [Synechococcus sp. CC9311]
 gi|113882745|gb|ABI47703.1| Protein erfK/srfK precursor [Synechococcus sp. CC9311]
          Length = 238

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 65/240 (27%), Gaps = 75/240 (31%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL--EQKMGLRYVLVNIPAA 203
           + R G +  G +     E         I  L + L     L      +  R  L  +   
Sbjct: 43  EERQG-EIKGEILVEAPEEAPKRKSDPIPPLAIPLSDTASLARIPDDLMERKGLQLVLDR 101

Query: 204 ---SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
               L  +++G++  R    VG    +TP    R+   + +P W  P S           
Sbjct: 102 KHHQLLVLKDGQMTRRFPAAVGTTGWETPAGRFRVFEKVKDPVWTHPVS----------- 150

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY---S 317
                            G  V  E                   K N + S  I FY   +
Sbjct: 151 -----------------GDLVDAES------------------KGNPLGSRWIGFYRDCN 175

Query: 318 RNNT---------------YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
             +                  H TP         R  + GCVR+   N+ ++   +   T
Sbjct: 176 GRSGWDGEQYLDINGCTVAGFHGTPYRWTVG---RAVSHGCVRLYEENVQEVFDLVRVGT 232


>gi|168180045|ref|ZP_02614709.1| zinc carboxypeptidase family protein [Clostridium botulinum NCTC
           2916]
 gi|226948652|ref|YP_002803743.1| zinc carboxypeptidase family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|182669125|gb|EDT81101.1| zinc carboxypeptidase family protein [Clostridium botulinum NCTC
           2916]
 gi|226842575|gb|ACO85241.1| zinc carboxypeptidase family protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 423

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMNV 167
            E +N 
Sbjct: 62  YELLNK 67


>gi|317128889|ref|YP_004095171.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
 gi|315473837|gb|ADU30440.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
          Length = 470

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L +G+    V+ ++E L   G       +   +    E AV+ +Q  HGL+ 
Sbjct: 135 WPV--DTVLSIGDHGPKVKIIQEHLSEIGYYVQE--IDGLYGEKTEKAVERYQKEHGLNI 190

Query: 154 SGMVDSSTL 162
           +G VD  T+
Sbjct: 191 TGKVDHETI 199



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    ++ L+E L  +G    +  +   + +  + AV++ Q  + L   G+      + 
Sbjct: 260 GDEHEDIKELQELLNKAGYY--NGTIDGIYGSNTQQAVRMLQRDNDLMVDGLAGDQVFDF 317

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           +       ++++  NL + +    +        +   + S+E
Sbjct: 318 LKSSD---LKKIADNLEKSQVESTKNENNSKETIEKSSNSME 356


>gi|148379350|ref|YP_001253891.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153930920|ref|YP_001383725.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935817|ref|YP_001387274.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           Hall]
 gi|148288834|emb|CAL82918.1| putative gamma-D-glutamyl-L-diamino acid endopeptidase [Clostridium
           botulinum A str. ATCC 3502]
 gi|152926964|gb|ABS32464.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931731|gb|ABS37230.1| zinc carboxypeptidase family protein [Clostridium botulinum A str.
           Hall]
 gi|322805689|emb|CBZ03254.1| gamma-D-glutamyl-L-diamino acid endopeptidase I [Clostridium
           botulinum H04402 065]
          Length = 423

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMNV 167
            E +N 
Sbjct: 62  YELLNK 67


>gi|78222403|ref|YP_384150.1| peptidoglycan binding domain-containing protein [Geobacter
           metallireducens GS-15]
 gi|78193658|gb|ABB31425.1| Peptidoglycan-binding domain 1 [Geobacter metallireducens GS-15]
          Length = 321

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                 G++   V+ ++ RL   G           F    ESAVK FQ ++GLD  G+V 
Sbjct: 2   TNAYRRGSTGAEVKTIQTRLAGLGLYS--GDTDGIFGGGTESAVKNFQRKNGLDVDGIVG 59

Query: 159 SSTLEAM 165
             T + +
Sbjct: 60  EDTWKKL 66


>gi|289663317|ref|ZP_06484898.1| hypothetical protein XcampvN_09602 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 255

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 32/111 (28%), Gaps = 3/111 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G    SV++L+ +L   G              F    + AV+ FQ  HGL   G
Sbjct: 31  DGKLEQGERGESVKQLQGQLAQLGYHGRDGKPLHPDGDFGGNTKHAVEQFQREHGLQVDG 90

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           +V   T  A+   +     +                         P  ++ 
Sbjct: 91  VVGRQTQAALGQALSQYTAKQAEQTDATAIPSPAPSSPLLSDPRHPDNAMY 141


>gi|319644741|ref|ZP_07998974.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
 gi|317392550|gb|EFV73344.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
          Length = 359

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 31/66 (46%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+S   V+ L++RLI +G   P  G   ++      AVK  Q   G+   G+   +T
Sbjct: 195 LKKGSSGSKVRALQKRLIAAGFSLPKYGADGSYGDETVQAVKALQKNAGIAVDGIYGPAT 254

Query: 162 LEAMNV 167
            +A+  
Sbjct: 255 EKALAA 260



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 47/161 (29%), Gaps = 25/161 (15%)

Query: 31  IHASVLDEIINESYHSIVNDRFD-----NFLARVDMGIDSDIPIISKETIA-------QT 78
           +        +      ++   F         +  D  + +   +     IA        T
Sbjct: 195 LKKGSSGSKVRALQKRLIAAGFSLPKYGADGSYGDETVQAVKALQKNAGIAVDGIYGPAT 254

Query: 79  EKAIAFYQDILSRGGWP------ELPIRPLH---LGNSSVSVQRLRERLIISGDLD---- 125
           EKA+A  +    +           LP               V++++E L           
Sbjct: 255 EKALAAIEAKKKKPSSSGKKSSYPLPSGIYKVKSPLMKGTGVRQIQEALAALYFYPDKGA 314

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + G+   +     +AVK FQ+ +GL   G+    T   + 
Sbjct: 315 KNNGIDGYYGPKTANAVKRFQLMYGLSADGIYGPKTKAKLE 355


>gi|253573824|ref|ZP_04851167.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847352|gb|EES75357.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 240

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L LG++S  V  L+ RL   G    ++ L+  +    + AV+ FQ R+GL   G+ 
Sbjct: 53  ASGTLKLGSTSGDVWDLQYRLKALGIF--NEQLTGYYGTKTQQAVRTFQSRYGLQVDGVA 110

Query: 158 DSSTLEAMNV 167
              T  A+  
Sbjct: 111 GPQTWAALRK 120


>gi|158321097|ref|YP_001513604.1| spore cortex-lytic enzyme SleB [Alkaliphilus oremlandii OhILAs]
 gi|158141296|gb|ABW19608.1| Spore cortex-lytic enzyme SleB [Alkaliphilus oremlandii OhILAs]
          Length = 228

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+S   V+  + RL   G L    G+   F      AV  FQ  +GL P G++ 
Sbjct: 28  GQTLAWGSSGEDVRIAQSRLKQWGYL--EGGVDGVFGKTTYDAVIKFQKANGLTPDGVIG 85

Query: 159 SSTLEAMNVP 168
           + T  A+ + 
Sbjct: 86  AQTRVALGMS 95


>gi|146296750|ref|YP_001180521.1| cell wall hydrolase, SleB [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410326|gb|ABP67330.1| cell wall hydrolase, SleB [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 226

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  ++ RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGSEVIEIQRRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNVPVDLRIRQLQVNLM 181
           + +           NL 
Sbjct: 99  LGIVTTTSRSSYNSNLN 115


>gi|238926949|ref|ZP_04658709.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
 gi|238885183|gb|EEQ48821.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
          Length = 226

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G           F      AVK FQ  HGLD  G+V
Sbjct: 28  SAESFQIGDQGTDVAEIQGQLSNYGY---DVAADGDFGPATAEAVKEFQAAHGLDADGLV 84

Query: 158 DSSTLEAM 165
             +T EA+
Sbjct: 85  GPATYEAL 92


>gi|326204425|ref|ZP_08194283.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
 gi|325985457|gb|EGD46295.1| NLP/P60 protein [Clostridium papyrosolvens DSM 2782]
          Length = 508

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 61/198 (30%), Gaps = 15/198 (7%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L    I   V D  +      +++         +D   +     +   T     K     
Sbjct: 62  LQGDVIKLGVKDSTVTVIQKKLMD----LDYLEIDEPTEEFGESLKLATELFQRKNKLPI 117

Query: 86  QDILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
              +    +  L         + LG     VQ+L+ERL   G +      +  F    + 
Sbjct: 118 TGEVDAKTYQLLLSDDAKAYTVSLGAEGTDVQQLQERLYELGYM---GKATGYFGTDTDI 174

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AVK FQ R+GL   G V   T E +     + +     +  +     +Q++     L   
Sbjct: 175 AVKDFQKRNGLFDDGNVGKQTREVLYSAKAVPMSFYLGDENKEILQYKQRLYELGYLTAK 234

Query: 201 PAASLEAVENGKVGLRST 218
           P+      +N  V     
Sbjct: 235 PSGK---YDNDTVQAVKR 249



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+ +  + + ++RL   G L  +   S  +D     AVK FQ  +GL   G +   T +
Sbjct: 211 LGDENKEILQYKQRLYELGYL--TAKPSGKYDNDTVQAVKRFQENNGLIADGFIGPVTKD 268

Query: 164 AMNVP 168
            +   
Sbjct: 269 LLMSS 273



 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+S   V +++  L   G L     ++  F +   +AV  FQ ++GL   G + S 
Sbjct: 279 ALDIGDSGDDVTKVQTYLKKLGYLKS---VTGYFGSDTHNAVLKFQSKNGLGKDGKIGSQ 335

Query: 161 TLEAMNVPVDLRIR 174
           T+  +  P   +  
Sbjct: 336 TIAKLLSPDAKKWT 349



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 71/234 (30%), Gaps = 27/234 (11%)

Query: 57  ARVDMGIDSDIPIISKETI---AQTEKAIAFYQDILSRGGWPELP--IRPLHLGNSSVSV 111
                   S      ++     A    A+       SRG  P  P     + LG    +V
Sbjct: 21  TDKPEKTVSVSDQTPQQKYSKPATESNALTK----TSRGITPMNPLQGDVIKLGVKDSTV 76

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             ++++L+    L+  +     F   ++ A +LFQ ++ L  +G VD+ T + + +  D 
Sbjct: 77  TVIQKKLMDLDYLEIDEPTEE-FGESLKLATELFQRKNKLPITGEVDAKTYQ-LLLSDDA 134

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           +   + +             G     +      L  +        +   +   D Q    
Sbjct: 135 KAYTVSLGAE----------GTDVQQLQERLYELGYMGKATGYFGTDTDIAVKDFQKRNG 184

Query: 232 ------HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
                   +  R +      +P S    D    + Q  Q L +         GK
Sbjct: 185 LFDDGNVGKQTREVLYSAKAVPMSFYLGDENKEILQYKQRLYELGYLTAKPSGK 238


>gi|315646088|ref|ZP_07899208.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
 gi|315278287|gb|EFU41603.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
          Length = 112

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 7/75 (9%)

Query: 289 NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV- 346
               P N+    ++P       +  +     +   +H T +P       R  + GC+R+ 
Sbjct: 36  TQTPPGNYTIVTKEPNPGGPFGAYWLGLSKPH-YGIHGTNDPSSIG---RSVSHGCIRMY 91

Query: 347 -RNIIDLDVWLLKDT 360
             +++ L   +   T
Sbjct: 92  NEDVVQLASLVPLHT 106



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           M    ++V++    L  ++   V     + VG++  QTP  +  I     NP  
Sbjct: 1   MPKYRIIVDVGNYQLHLLDGDAVVHTYPIAVGKMATQTPPGNYTIVTKEPNPGG 54


>gi|312793773|ref|YP_004026696.1| spore cortex-lytic enzyme [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180913|gb|ADQ41083.1| spore cortex-lytic enzyme [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 225

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +++RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQKRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNV 167
           + +
Sbjct: 99  LGI 101


>gi|302532519|ref|ZP_07284861.1| peptidoglycan-binding domain 1 protein [Streptomyces sp. C]
 gi|302441414|gb|EFL13230.1| peptidoglycan-binding domain 1 protein [Streptomyces sp. C]
          Length = 306

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+    W  L    L  G S  +V  L+  L          G+   F    ++AV+ FQ
Sbjct: 69  GIVGAATWAAL-APTLKEGASGPAVSALQGELNAK--AGAGLGVDGKFGDGTKAAVRRFQ 125

Query: 147 MRHGLDPSGMVDSSTLE 163
              GL   G+V  +T +
Sbjct: 126 TAAGLTADGVVGPATWK 142



 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN    V  L+  L+  G    S      F A   +AVK FQ  H L   G+V ++T  A
Sbjct: 22  GNRGTDVLALQRLLVSKG---QSAPADGVFGASTTAAVKRFQASHKLAADGIVGAATWAA 78

Query: 165 MNVPVDL 171
           +   +  
Sbjct: 79  LAPTLKE 85


>gi|196249438|ref|ZP_03148136.1| NLP/P60 protein [Geobacillus sp. G11MC16]
 gi|196211195|gb|EDY05956.1| NLP/P60 protein [Geobacillus sp. G11MC16]
          Length = 544

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 79/293 (26%), Gaps = 31/293 (10%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIPIISKETIA 76
                 + +   +  + +      +    +        +   V               + 
Sbjct: 94  AFVPTARTLSVGMRGDDVKVLQQRLKQLGYFKYPEITGYFGTVTEAAVKQF--QQANGLK 151

Query: 77  QTEKA----IAFYQD-ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            T KA    I   +  +  +          L +G+    V  L++ L + G        +
Sbjct: 152 VTGKADAVTIERLRQAVSKQTTTTSSSPVTLKIGSRGSEVSELQKNLKLLGYFT-YPTAT 210

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
             +      AV+ FQ  +GL  +G VDS+TL  +   V  +             L     
Sbjct: 211 GYYGTITADAVRRFQKDNGLPATGSVDSTTLGRIADAVKKKTAPPAKENSSSVYLKIGTR 270

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI- 250
           G +   V      L              I G     T      + R   +    +  S+ 
Sbjct: 271 GEKVKQVQTNLKQLGY-------FTYPEITGYYGTITA---DAVRRFQKDNGLPVTGSVD 320

Query: 251 -----IQKDMMALLRQDPQYLKDNNIHMIDEK-GKEVFVEEVDWNSPEPPNFI 297
                  +D +      P     +++++     G++V   + +        + 
Sbjct: 321 STTFGRIEDAVKKKTASPAKESSSSVYLKTGTRGEKVKQVQTNLKQLGYFTYP 373



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 9/200 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G SS  V+ L++ L   G        +  F    E AV+ FQ    L  +G+VD +T 
Sbjct: 31  KVGMSSSKVKELQQLLKEKGFFS-YPQATGYFGPITEEAVRAFQKAANLPVTGVVDDATY 89

Query: 163 EAMNV-PVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVENGKVGLRSTVI 220
             +       R   + +    +K L ++      +    I        E      +    
Sbjct: 90  AKLRAFVPTARTLSVGMRGDDVKVLQQRLKQLGYFKYPEITGYFGTVTEAAVKQFQQANG 149

Query: 221 V---GRVDRQTPILHSRINRIMFNPYWVIPRSII---QKDMMALLRQDPQYLKDNNIHMI 274
           +   G+ D  T     +            P ++    +   ++ L+++ + L        
Sbjct: 150 LKVTGKADAVTIERLRQAVSKQTTTTSSSPVTLKIGSRGSEVSELQKNLKLLGYFTYPTA 209

Query: 275 DEKGKEVFVEEVDWNSPEPP 294
                 +  + V     +  
Sbjct: 210 TGYYGTITADAVRRFQKDNG 229



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V++++  L   G       ++  +      AV+ FQ    L  +G+VDS T
Sbjct: 348 LKTGTRGEKVKQVQTNLKQLGYFT-YPEITGYYGTITADAVRRFQKDAKLQANGIVDSQT 406

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
            E +         Q   + + + +L+  
Sbjct: 407 YERLIGQAPASKGQASASKLDVMELIAD 434


>gi|15828462|ref|NP_302725.1| hydrolase [Mycobacterium leprae TN]
 gi|221230939|ref|YP_002504355.1| putative hydrolase [Mycobacterium leprae Br4923]
 gi|13093892|emb|CAC32236.1| putative hydrolase [Mycobacterium leprae]
 gi|219934046|emb|CAR72804.1| putative hydrolase [Mycobacterium leprae Br4923]
          Length = 406

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--------FDAYVESAVKLFQMRHG 150
              L  G+ + +V  +R  L   G L                 FD  +E AV+ FQ   G
Sbjct: 9   GDTLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLEHAVRAFQQHRG 68

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T  A+ 
Sbjct: 69  LLVDGVVGEATHRALK 84



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 43/154 (27%), Gaps = 18/154 (11%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD 87
              +     +  + E   ++      +               +    +    +A   ++ 
Sbjct: 9   GDTLRCGDRNAAVTEIRSALAALGLLHSPGDDLTTSKYIALDLFDPQLEHAVRAFQQHRG 68

Query: 88  ILSRG-----GWPELPIRPLHLGN-----------SSVSVQRLRERLIISGDLDPSKGLS 131
           +L  G         L      LG            S   V  L+ RL   G    +  + 
Sbjct: 69  LLVDGVVGEATHRALKEASYRLGARTLYHRFGAPLSGDDVATLQARLQDLGFY--TGMVD 126

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             F     +A+  +Q  +GL   G+    TL ++
Sbjct: 127 GHFGLQTHNALISYQREYGLTADGICGPETLRSL 160


>gi|332970134|gb|EGK09128.1| zinc D-Ala-D-Ala carboxypeptidase [Desmospora sp. 8437]
          Length = 243

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLF 145
           +   GW     R L  G+S   V+ L+ R+       PS     +   F    E+AVK F
Sbjct: 30  VDAYGW----SRTLKQGDSGADVRELQIRVAGWAADSPSRTYVAVDGVFGPGTEAAVKRF 85

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q  +GL P G+V  +T  A+N
Sbjct: 86  QRAYGLSPDGVVGPATQSALN 106


>gi|294631054|ref|ZP_06709614.1| peptidoglycan binding domain-containing protein [Streptomyces sp.
           e14]
 gi|292834387|gb|EFF92736.1| peptidoglycan binding domain-containing protein [Streptomyces sp.
           e14]
          Length = 282

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 5/152 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+S  SV+ L+ RL     L  +      +    E AV+ FQ + GL  +G 
Sbjct: 72  PARVLWSRGDSGRSVRELQARLRQIAWLSEAPT--GTYGPLTERAVRGFQSKRGLPATGR 129

Query: 157 VDSSTLEAMNVPVDLR--IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T   +              +          + +  R + ++  + +L  + +G+  
Sbjct: 130 TDTVTWRRLVAMTRAPGTWELYPMGGQPAGAPDARCLTGRVLCIDKTSRTLRWMIDGRTL 189

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               V  G     T     ++     +    I
Sbjct: 190 STMAVRFGTQYTPTREGEFQVYWKSRHHVSTI 221


>gi|284050956|ref|ZP_06381166.1| peptidoglycan binding domain-containing protein [Arthrospira
           platensis str. Paraca]
          Length = 247

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+SS  V  L+ +L   G           F      +VK FQ  +GL   G+   
Sbjct: 182 KSLSHGDSSSRVANLQHKLAYYGYFHARAT--GYFGPITTKSVKAFQRDYGLKVDGVAGP 239

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 240 ATLAALGM 247



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +T  A
Sbjct: 89  GSSGNHVVQLQNALANHGYF--RARSTGYFGSMTKHSVKAFQRDYGLAVDGIVGPATASA 146

Query: 165 MN 166
           + 
Sbjct: 147 LG 148


>gi|312127392|ref|YP_003992266.1| spore cortex-lytic enzyme [Caldicellulosiruptor hydrothermalis 108]
 gi|311777411|gb|ADQ06897.1| spore cortex-lytic enzyme [Caldicellulosiruptor hydrothermalis 108]
          Length = 226

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +++RL   G  D    +   +      AV+ FQ ++GL   G+  S TL A
Sbjct: 41  GSTGPEVIEIQKRLKQWGYYD--GPIDGIYGYKTYMAVRYFQAKNGLKVDGIAGSETLRA 98

Query: 165 MNV 167
           + +
Sbjct: 99  LGI 101


>gi|282600699|ref|ZP_06257697.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
 gi|282571458|gb|EFB76993.1| putative cell wall lytic activity [Subdoligranulum variabile DSM
           15176]
          Length = 508

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 16/207 (7%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR--ERLIISGDLDP 126
           ++ + T      A    Q  L    WP +    L  G++ + V+ ++   RL        
Sbjct: 115 VVGQATWEALYSAWLDMQSDLGGTAWPGI---VLRRGDTGMEVRLVQFWLRLAAENYSAL 171

Query: 127 SK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV-NLMRIK 184
           +   +   F A  + AV  FQ   GL   G+V  +T   +N        ++   N+   +
Sbjct: 172 AAVSVDGNFGASTQRAVTGFQSLFGLTADGLVGRATWNKLNEVALAVANEIVEPNVAPGQ 231

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                + G R   V      L          R +     +   T               W
Sbjct: 232 FTTTVREGNRGTTVRAVQYYLR---------RLSAYYSDIPSVTVDGVFGSATTKAVKAW 282

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNI 271
                +    ++  L  +  Y    N+
Sbjct: 283 QARAGLTVDGVVGRLTWNSLYAAVENL 309



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPS 127
           S + +A+            S G WP +    L  G++   V++++     L       P+
Sbjct: 30  SVKDLAELTSEGETATGTESSGSWPGV---VLKRGSTGSEVEQVQFWLSELAQFNSALPA 86

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +   F A  E AVK+FQ   GL   G+V  +T EA+
Sbjct: 87  LTVDGNFGAATERAVKIFQQEQGLTADGVVGQATWEAL 124



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 16/166 (9%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           V   L +           SV       +  ++    F +       G+        + T 
Sbjct: 157 VQFWLRLAAENYSALAAVSVDGNFGASTQRAV--TGFQSLFGLTADGLV------GRATW 208

Query: 76  AQTEK-AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLD--PSKG 129
            +  + A+A   +I+     P      +  GN   +V+ ++    RL         PS  
Sbjct: 209 NKLNEVALAVANEIVEPNVAPGQFTTTVREGNRGTTVRAVQYYLRRLSA--YYSDIPSVT 266

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           +   F +    AVK +Q R GL   G+V   T  ++   V+     
Sbjct: 267 VDGVFGSATTKAVKAWQARAGLTVDGVVGRLTWNSLYAAVENLAES 312



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 10/96 (10%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLII-----SGDLDPSKGLSVAFDAYVESAVKLF 145
            G WP      L LG+S  +V +++  L +      G        +  FD   ++A++ +
Sbjct: 417 DGIWP---ASALTLGSSGPAVLQVQRWLNLIASVDQGY--SFVPETGDFDDATQNALENY 471

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           Q+  GL   G+VD++T E++    +      Q    
Sbjct: 472 QLTAGLPTLGVVDAATWESLRTAAEALCSTCQQAKE 507



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 8/80 (10%)

Query: 98  PIRPLHLGNSSVSVQRLRER-------LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P   L  G++  SV RL          L     L  +   S  +   +E  V+  Q   G
Sbjct: 324 PTSTLQPGDTGASVLRLDRLLLFLGQWLPEINFLGSTAP-SDVYSNDLEITVRSAQRYFG 382

Query: 151 LDPSGMVDSSTLEAMNVPVD 170
           L  +G V ++          
Sbjct: 383 LPETGQVTAADWNVFLKAAQ 402


>gi|167039388|ref|YP_001662373.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300914030|ref|ZP_07131347.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725285|ref|YP_003905036.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|166853628|gb|ABY92037.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|300890715|gb|EFK85860.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582346|gb|ADN55745.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
          Length = 1089

 Score = 66.2 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 23/213 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++   V+ L+E L I G    S      F    ++AVK FQ ++GL   G+V   T
Sbjct: 319 LKLGSTGNGVKILQETLNIIGY---SLVEDGQFGTRTQAAVKDFQSKNGLTVDGIVGPQT 375

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            + +      R     +        +          + IPA       +G     + V +
Sbjct: 376 WQKLG-SKLTRTYIRPIYQWNYAWGINISKAYAGAGIGIPA---SFSVDGSNAYFTDV-L 430

Query: 222 GRVDRQTPILHSRINRIM----FNPYWVIPRSIIQKDMMALLRQDPQYLKD----NNIHM 273
           G + +   I  S +N  +     N   ++  S    D        P Y  D    +   +
Sbjct: 431 GGIYKINNIFSSTLNLTVNGNLRNTNNLVNHSPAVDD---RYLYIPYYYSDSSKQHGKIV 487

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           + +K     ++++D++S    +    Q P   N
Sbjct: 488 VLDKNNLNVIKQIDFSSSSLKS----QLPNSSN 516


>gi|298492482|ref|YP_003722659.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298234400|gb|ADI65536.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 249

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP      L LGN    V +L++ L   G L  S  +   F    E+AVK  Q+R+GL 
Sbjct: 176 GWPI-----LRLGNRGSEVVKLQKLLQNLGFLKGS--IDGDFGITTEAAVKAAQIRYGLQ 228

Query: 153 PSGMVDSSTLEAMNV 167
           P G+   +T EA   
Sbjct: 229 PDGIAGGATWEAFVR 243



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 2/96 (2%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA    I        +    L +G+    V  L+  L + G    +  +   +      
Sbjct: 21  AIAVPTKIAQVSTVGNINRPTLKVGSQGERVSELQAALKLLGFY--TGAVDGVYQEATAR 78

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           AV  F+   GL+P G+VD+ T + +   V +    +
Sbjct: 79  AVSQFKQAAGLNPDGVVDAITWQKLFPNVSIVATNI 114


>gi|113475624|ref|YP_721685.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110166672|gb|ABG51212.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 487

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 10/196 (5%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARV--DMGIDSDIPIISKETIAQTEKA 81
            +   K +    ++  +      +    F         D    + + I  +     T   
Sbjct: 186 FNSSTKVLSFGEVNPQVAIIQRQLAELGFYKGQINSIYDQKTRTAV-IQFQNVYGITPTG 244

Query: 82  IAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
              Y           +P  R L LGN+ + V+RL++RL   G       ++  FD   E+
Sbjct: 245 QVGYTTREFLFETRTIPVERVLRLGNTGLDVRRLQQRLRSLGYYQRQ--ITNYFDLSTET 302

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV  FQ R+ + P+G+V  +T +A     D  +    V+  R       +    Y  +  
Sbjct: 303 AVIDFQKRNRITPTGIVGQTT-KAFLFDADQVLPPGPVSYSRG---NYARKHYSYQGLLK 358

Query: 201 PAASLEAVENGKVGLR 216
           P     AVE  ++ L 
Sbjct: 359 PGNEGWAVEQLQILLT 374



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S  V  ++  L   G    +  L+  +    E AVK FQ   GL P+G ++ +T
Sbjct: 111 LRCGDFSEIVAEVQRELRELGYF--TANLTGYYGQETEIAVKQFQQEKGLKPTGEIEPTT 168

Query: 162 L 162
            
Sbjct: 169 W 169



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  GN   +V++L+  L   G       +   F    E AV+ FQ   GL  +G+   
Sbjct: 355 GLLKPGNEGWAVEQLQILLTRLGYYS--GVIDGFFGLRTEFAVRSFQQDLGLVDTGVATI 412

Query: 160 STLEAMNVP 168
            TL+A+  P
Sbjct: 413 DTLQALRHP 421


>gi|124023582|ref|YP_001017889.1| hypothetical protein P9303_18821 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963868|gb|ABM78624.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 180

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 70/191 (36%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
              R+++++  +  L  +++G +    +V VG    +TP    ++     +P W  P+S 
Sbjct: 35  REGRHLVLDRRSRRLLVLQDGSLIKSFSVAVGMPGWETPTGEFQVLDKTPHPIWEHPQSG 94

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                                                           R   G  N + S
Sbjct: 95  K-----------------------------------------------RIGSGPNNPLGS 107

Query: 311 TKIEFY------SRNNT------------YMHDTPEPILFNNVVRFETSGCVRV--RNII 350
             I FY      + ++               H TP         R  + GCVR+   +I 
Sbjct: 108 RWIGFYRDCNGRNAHDGDRWLTIDGCVTSGFHGTPHCWTVG---RAVSHGCVRLFEEDIQ 164

Query: 351 DLDVWLLKDTP 361
            L   +   TP
Sbjct: 165 SLYRLVKIGTP 175


>gi|319647510|ref|ZP_08001730.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
 gi|317390358|gb|EFV71165.1| N-acetylmuramoyl-L-alanine amidase cwlL [Bacillus sp. BT1B_CT2]
          Length = 224

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 98  PIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P    L  G+S   V+ L++RLI +G   P  G   ++      AVK  Q + G+   G+
Sbjct: 55  PTGTILKKGSSGSQVKALQKRLIAAGFSLPKYGADGSYGNETVQAVKALQKKAGIAVDGI 114

Query: 157 VDSSTLEAMNV 167
              +T +A+  
Sbjct: 115 YGPATEKALAA 125



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V++++E L            + G+   +     +AVK FQM 
Sbjct: 143 PLPSGIYKVKSPLMKGTAVRQVQEALAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQMM 202

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL   G+    T   +  
Sbjct: 203 HGLSADGIYGPKTKAKLEA 221


>gi|152970977|ref|YP_001336086.1| hypothetical protein KPN_02435 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150955826|gb|ABR77856.1| hypothetical protein KPN_02435 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 313

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 100 IVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 159 E----------------------------------YAKEGKTLPAMVPPGPDNPMGLYAI 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 185 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 229


>gi|164688705|ref|ZP_02212733.1| hypothetical protein CLOBAR_02352 [Clostridium bartlettii DSM
           16795]
 gi|164602181|gb|EDQ95646.1| hypothetical protein CLOBAR_02352 [Clostridium bartlettii DSM
           16795]
          Length = 429

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 35/125 (28%), Gaps = 16/125 (12%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSG 342
           N  +   +     PG    N +    +         +   +H               + G
Sbjct: 75  NKIKNRPYYKTGIPGGDPRNPLGKRWMGLNIDGTQGSTYGIHGNNNEKSIGKN---VSHG 131

Query: 343 CVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSI 402
           C+R+ N      WL    P  +   I+    +       +A    V  +  S W  ++  
Sbjct: 132 CIRMHNSE--VEWLFDQVPLGTVVLIKNTSNSDN----YIANYYNVKLL-QSGWFTENKK 184

Query: 403 IQFRD 407
             +R 
Sbjct: 185 TYYRK 189


>gi|308173372|ref|YP_003920077.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7]
 gi|307606236|emb|CBI42607.1| L,D-transpeptidase [Bacillus amyloliquefaciens DSM 7]
 gi|328553699|gb|AEB24191.1| L,D-transpeptidase [Bacillus amyloliquefaciens TA208]
          Length = 166

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 16/130 (12%)

Query: 236 NRIMFNPY--WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           + I+ N      IP SI+       L+     L      +       + V ++   +P  
Sbjct: 44  HIIIPNLPDPSTIPYSIVVYIGAKKLQ-----LYRLGRLIRTY---PIAVGKILTTTPTG 95

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IID 351
             +I  + P       +  +     +   +H T +P          + GC+R+ N  + +
Sbjct: 96  EFYIVNRQPKPGGPFGAYWLSLSKLH-YGIHGTNDPSSIGK---AVSKGCIRMHNQDVTE 151

Query: 352 LDVWLLKDTP 361
           L   +   T 
Sbjct: 152 LAATVPNGTK 161


>gi|256398134|ref|YP_003119698.1| cell wall hydrolase/autolysin [Catenulispora acidiphila DSM 44928]
 gi|256364360|gb|ACU77857.1| cell wall hydrolase/autolysin [Catenulispora acidiphila DSM 44928]
          Length = 381

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               G+S  +V  +RERL   G +D           FD  VE+AV+ FQ        GMV
Sbjct: 6   TYRRGDSGPAVAAIRERLARLGLIDAGSIPAQGEPVFDDAVENAVRHFQQTRRTTVDGMV 65

Query: 158 DSSTLE 163
              T+ 
Sbjct: 66  TPGTMR 71



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 13/82 (15%)

Query: 97  LPIRPLHLGNSS-----------VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           L      LG+               V  L+  L+  G       ++ A+D     AV+ F
Sbjct: 73  LEEASWRLGDRDLVPSPAEPPFGDDVAELQRSLLTLGF--DCGRVNGAYDPTTVGAVREF 130

Query: 146 QMRHGLDPSGMVDSSTLEAMNV 167
           Q   GL  +G+ D +T++A+N 
Sbjct: 131 QRNVGLPATGVTDLATVQALNR 152


>gi|209696096|ref|YP_002264026.1| general secretion pathway protein A [Aliivibrio salmonicida
           LFI1238]
 gi|208010049|emb|CAQ80372.1| general secretion pathway protein A [Aliivibrio salmonicida
           LFI1238]
          Length = 519

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 7/126 (5%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW--PELPIR 100
                 +D            I   +P   +  I  + +    + +      W  P +  R
Sbjct: 385 LQQENGDDLLAIVYHISSKNIALLLP---ERQIEVSHQWFEKHWNGAYMQLWKKPIMTKR 441

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG+   ++  L + L  +  L+     S  F    E  VK FQ   GL   G+V SS
Sbjct: 442 AMRLGDEGEAIVELNQLLSFA--LEQPLTDSNRFTEETEEQVKQFQAIFGLKTDGVVGSS 499

Query: 161 TLEAMN 166
           TL  ++
Sbjct: 500 TLMWLD 505


>gi|294627225|ref|ZP_06705812.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|294667703|ref|ZP_06732915.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
 gi|292598464|gb|EFF42614.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292602543|gb|EFF45982.1| lytic enzyme [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           10535]
          Length = 244

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G+ S  V +L++ L   G  D           F      AV  FQ +HGL   G
Sbjct: 108 TAALRHGDDSQDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVTAFQKQHGLQQDG 167

Query: 156 MVDSSTLEAMN-VPVDLRIRQLQ 177
           +V   T  A++  PV +R  Q+ 
Sbjct: 168 VVGRDTRAALSAQPVQIREAQVA 190


>gi|288934536|ref|YP_003438595.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|288889245|gb|ADC57563.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 313

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 100 IVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 159 E----------------------------------YAKEGKTLPALVPPGPDNPMGLYAI 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 185 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 229


>gi|254424899|ref|ZP_05038617.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196192388|gb|EDX87352.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 252

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 10/135 (7%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQR 113
                 D   D D P ++  T +Q  +     + I        +    L  G+   SV R
Sbjct: 25  TIGVSADALEDRDTPQLTTRTYSQISQ-----RQIAQA---STVIYPTLRNGSVGESVSR 76

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L+  L + G       ++  ++   + AV  FQ    L   G+   +T   +    +   
Sbjct: 77  LQATLKLLGFY--QGEVNGTYNELTQQAVASFQSAVNLSADGITGPATWRKLLPAPNDVA 134

Query: 174 RQLQVNLMRIKKLLE 188
                +        +
Sbjct: 135 SDSVASNTDATSTTD 149



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L       +V +L+  L   G  D    +   + A  E+AV+ FQ    L    +V
Sbjct: 181 SPPVLRPSAEGPAVSQLQRELQTLGYYD--GTIDGKYGALTEAAVRAFQADQQLIVDAIV 238

Query: 158 DSSTLEAMNV 167
             ST  A+  
Sbjct: 239 GPSTWTALTR 248


>gi|218672072|ref|ZP_03521741.1| hypothetical protein RetlG_10705 [Rhizobium etli GR56]
          Length = 58

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%)

Query: 374 TRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
             +   VK+  +VPV+  Y +AW  KD ++++ DD+YG D
Sbjct: 1   NGQNHAVKVPQKVPVYVSYFTAWPNKDGVVEYFDDVYGRD 40


>gi|188991086|ref|YP_001903096.1| hypothetical protein xccb100_1690 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167732846|emb|CAP51040.1| hypothetical protein with peptidoglycan-binding domain [Xanthomonas
           campestris pv. campestris]
          Length = 441

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRH 149
           G P      L  G     V++L+ +L   G +            F A  + AV+ FQ  H
Sbjct: 216 GSPSADDGKLEQGERGEQVKQLQGQLAQLGAIGRDGKPLHPDGDFGANTKHAVEQFQREH 275

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL   G+V   T  A+  
Sbjct: 276 GLQVDGVVGRQTQAALGQ 293


>gi|325918977|ref|ZP_08181044.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325534822|gb|EGD06751.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 644

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V++L++ L   G  D +        A+      AVK FQ  HGL   
Sbjct: 441 TSGVLREKAHGAEVEKLQQTLQQLGYKDANGNELKADSAYGQRTGEAVKAFQRAHGLQDD 500

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   TL+A+       +   + N
Sbjct: 501 GIVGVDTLKALKQAEKTPLLSEKTN 525


>gi|218705523|ref|YP_002413042.1| hypothetical protein ECUMN_2326 [Escherichia coli UMN026]
 gi|293405463|ref|ZP_06649455.1| hypothetical protein ECGG_00811 [Escherichia coli FVEC1412]
 gi|298381151|ref|ZP_06990750.1| hypothetical protein ECFG_00872 [Escherichia coli FVEC1302]
 gi|218432620|emb|CAR13514.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli UMN026]
 gi|291427671|gb|EFF00698.1| hypothetical protein ECGG_00811 [Escherichia coli FVEC1412]
 gi|298278593|gb|EFI20107.1| hypothetical protein ECFG_00872 [Escherichia coli FVEC1302]
          Length = 310

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPIGTRVQI 230


>gi|254426449|ref|ZP_05040165.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196187863|gb|EDX82829.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 498

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 28/189 (14%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF-------YQDI 88
            D  + +    I     D         + S +      ++ +  +           Y+D 
Sbjct: 180 RDLNLQKPILPIWGSESDARAPSSAGELQSYLARFPGSSVWRIPRVGERGQAWNLSYKDK 239

Query: 89  LSR--GGWPE---LPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +S+  GG P    LP   R L  G+    V+ L+  L        +   +  F+   E A
Sbjct: 240 VSQPVGGNPSEFELPSLSRILRRGSVGEDVKALQRALNALAF--EAGNTNGEFNTQTERA 297

Query: 142 VKLFQMRHGLDPSGMVDSSTLEA-------MNVPVDLRIRQLQVNLMR-----IKKLLEQ 189
           V  FQ + G+   G V   T  A       +N P    +++L     R     ++     
Sbjct: 298 VTRFQQKAGITIDGEVGPETWSALGGELGLVNRPDQGILQELGNFAEREANRDLQWTSPT 357

Query: 190 KMGLRYVLV 198
               +Y+ +
Sbjct: 358 SEAEKYLEI 366


>gi|171321312|ref|ZP_02910273.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
 gi|171093419|gb|EDT38603.1| Peptidoglycan-binding domain 1 protein [Burkholderia ambifaria
           MEX-5]
          Length = 266

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V  L+ +L+ +            +     +AV  FQ  HGL   G+   
Sbjct: 3   KTLRLGDRGTDVGYLQRQLVAA---SARIDTDAIYGNATRTAVMAFQASHGLVADGIAGP 59

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            T   +             +L R    L+  +     +  + +     + +G+ 
Sbjct: 60  KTWSTLASGRRDPRHLTDADLQRSADRLQVDLAAVRAVNEVESHGAGFLPDGRP 113


>gi|300113040|ref|YP_003759615.1| peptidoglycan-binding domain 1 protein [Nitrosococcus watsonii
           C-113]
 gi|299538977|gb|ADJ27294.1| Peptidoglycan-binding domain 1 protein [Nitrosococcus watsonii
           C-113]
          Length = 683

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 2/90 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV  L++RL   G           F +  ESAV+ FQ    +   G+V   T
Sbjct: 216 LGRGSRGASVIELQKRLSALGF--NPGAADGIFGSRTESAVRAFQHSQRITVDGIVGPQT 273

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
              +  P    +         +   L  ++
Sbjct: 274 WSRLYGPTPSPVPSPPSGTTSVTWKLPPEI 303



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 106 NSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           +S+  V+ +++ L  I G       +         SAV+ FQ RH L   G+V   T  A
Sbjct: 480 SSTDHVRWIQQSLNKIMGL---RLAVDGILGPMTRSAVRSFQSRHRLAVDGIVGPHTERA 536

Query: 165 MNVPVDL 171
           +      
Sbjct: 537 LVAAGAD 543



 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           L     +S   +     A++ FQ + GL   G+    T  A+
Sbjct: 128 LGSRLPVSGVMNRGTRDALRQFQKQQGLPVDGIAGPPTERAL 169


>gi|206578471|ref|YP_002237659.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae 342]
 gi|290508736|ref|ZP_06548107.1| erfK/srfK [Klebsiella sp. 1_1_55]
 gi|206567529|gb|ACI09305.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae 342]
 gi|289778130|gb|EFD86127.1| erfK/srfK [Klebsiella sp. 1_1_55]
          Length = 311

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPALVPPGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 227


>gi|254414875|ref|ZP_05028639.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178364|gb|EDX73364.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 406

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 4/146 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G++ + V+ L++ L   G       +   F A  E AV LFQ  +GL+P G+V  
Sbjct: 191 EVLREGDTGLRVKELQQILSAQGF--NPGPIDGIFGAGTEDAVVLFQKFYGLEPDGLVGP 248

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +T + +   V    +   ++            G + +    P   ++ ++  +       
Sbjct: 249 NTWKVLER-VSQPTQPPPIDTGTPTAPDTTPGGSKPLNPQTPFTQVQLLDTYRYYRELPH 307

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWV 245
               +      L      + F+  W 
Sbjct: 308 QTQAIQWLQAQLSEA-TLVEFSQKWR 332



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW---PELPIRPLHLGNSSVSVQRLR 115
           +D            + I   +  ++    +     W   P  P  PL  G+    V++++
Sbjct: 296 LDTYRYYRELPHQTQAIQWLQAQLSEATLVEFSQKWRNQPLEPFLPLQEGSVGSQVKQVQ 355

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           E L   G           + A  ++AV  FQ   G+   G+V + T   +N
Sbjct: 356 EVLQQEGF--DPGPADGIYGAKTKAAVIAFQRSKGMTADGIVGAVTWSVLN 404


>gi|297522118|ref|ZP_06940504.1| hypothetical protein EcolOP_31053 [Escherichia coli OP50]
          Length = 144

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 43/169 (25%), Gaps = 44/169 (26%)

Query: 202 AASLEAVENGK-VGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQKDMMALL 259
              L     G    +   + +G++ + TPI   +++ R    P W     +  +      
Sbjct: 1   EMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE------ 54

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
                                                      G  N M    +      
Sbjct: 55  -----------------------------YRAAGEPLPAVVPAGPDNPMGLYALYIGRLY 85

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
               H T     F   +R  + GCVR+RN      +L +  P  +R   
Sbjct: 86  AI--HGTNAN--FGIGLR-VSHGCVRLRNED--IKFLFEKVPVGTRVQF 127


>gi|544113|sp|P36550|CWLL_BACLI RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlL; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|436573|dbj|BAA02647.1| CwlL protein [Bacillus licheniformis]
 gi|742336|prf||2009368D cell wall protein
          Length = 360

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 32/66 (48%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L++RLI +G   P  G   +++     AVK  Q + G+   G+   +T
Sbjct: 196 LKKGASGSQVKALQKRLIAAGFSLPKYGADGSYENETVQAVKALQKKAGIAVDGIYGPAT 255

Query: 162 LEAMNV 167
            +A+  
Sbjct: 256 EKALAA 261



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP               V++++E L            + G+   +     +AVK FQ+ 
Sbjct: 279 PLPSGIYKVKSPLMKGTGVRQIQEALAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQLM 338

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL   G+  S T   +  
Sbjct: 339 HGLSADGIYGSDTKAKLKT 357


>gi|119511704|ref|ZP_01630808.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414]
 gi|119463613|gb|EAW44546.1| ErfK/YbiS/YcfS/YnhG-like protein [Nodularia spumigena CCY9414]
          Length = 237

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 25/172 (14%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ--TPILHSRINRIMFNPYWVIPRSIIQK 253
             VN P    +   N    +   V           P + +       N   +   +  Q 
Sbjct: 52  TSVNKPTYQPDVQRNSVGNMSGAVSQNSAGSTELLPKMRALFPGQRQNSQGLSSPTSSQT 111

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP-------NFIFRQDP---- 302
           +++  L     Y+      +       + + +  W +P           +   Q P    
Sbjct: 112 EVVVNLSDRRTYVYKGGEVIASY---PIAIGKEGWETPTGSFRITDKQKYPIWQHPITGK 168

Query: 303 ----GKINAMASTKIEFYS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               G  + +    I F+S  RN    H TP+  L        + GC+R+RN
Sbjct: 169 VFPSGADSPLGERWIGFWSDGRNEIGFHGTPDTHLLGA---AISHGCLRMRN 217


>gi|186684276|ref|YP_001867472.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
 gi|186466728|gb|ACC82529.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
          Length = 351

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 43/157 (27%), Gaps = 52/157 (33%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V+V++           +V     + VG+   +TP    ++  +   P W  P +      
Sbjct: 227 VVVDLSDRRTYVYAGDEVIASYPIAVGKKGWETPTGSFQVIHMRHYPIWRHPITGK---- 282

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                          G  + +    I F
Sbjct: 283 -------------------------------------------VFQAGTDSPLGDRWIGF 299

Query: 316 YS--RNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           +S  RN    H TP+  L        + GC+R+RN  
Sbjct: 300 WSDGRNEIGFHGTPDIDLVGT---AVSHGCLRMRNSD 333


>gi|212378958|gb|ACJ24812.1| matrix metalloproteinase [Pinus taeda]
          Length = 364

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  L+      G L     ++  FD  VESAV+ +Q   GL+ +G++D +T+  
Sbjct: 65  GDRMQGLPDLKRYFRRFGYLSAQNNVTEDFDEAVESAVRTYQKNFGLNVTGVLDEATISQ 124

Query: 165 MNVPVDLRIRQLQVNLM-RIKKLLEQKMGLR 194
           + VP   R   +  +   R + L     G  
Sbjct: 125 LMVPRCGREDIINGSSAMRGRGLFPFFPGSP 155


>gi|308069833|ref|YP_003871438.1| spore cortex-lytic enzyme precursor (Germination-specific amidase)
           (SCLE) [Paenibacillus polymyxa E681]
 gi|305859112|gb|ADM70900.1| Spore cortex-lytic enzyme precursor (Germination-specific amidase)
           (SCLE) [Paenibacillus polymyxa E681]
          Length = 217

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 6/133 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  S  V  L+++L   G      G +  + +    AV  FQ  +GL P G+  
Sbjct: 30  TSALKKGVQSERVLELQQQLHSLGYFK--AGFTAYYGSLTSKAVARFQRDNGLIPDGVAG 87

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV-LVNIPAASLEAVENGKVGLRS 217
           ++T   +     +R+  L       + +  +  G  +   V + A  L  V++G+     
Sbjct: 88  AATQAKLESFGKVRVTALD---QLARIIYSEARGESFEGQVAVGAVVLNRVQSGEFPSSI 144

Query: 218 TVIVGRVDRQTPI 230
             ++ +  + T +
Sbjct: 145 PDVILQPGQFTAV 157


>gi|304436897|ref|ZP_07396861.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370096|gb|EFM23757.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 220

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 +G+    V  ++ +L   G           F      AVK FQ  HGL   G+V
Sbjct: 22  SAESFQIGDQGTDVAEIQGQLSNYGY---DVAADGDFGPATAEAVKEFQAAHGLAVDGLV 78

Query: 158 DSSTLEAMNVPVDLRI 173
             ST EA+      ++
Sbjct: 79  GPSTYEALLGKAMPQV 94


>gi|288554241|ref|YP_003426176.1| endopeptidase SpoIID/LytB [Bacillus pseudofirmus OF4]
 gi|288545401|gb|ADC49284.1| cell wall lytic activity, endopeptidase (spoIID/lytB) [Bacillus
           pseudofirmus OF4]
          Length = 527

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L N   +V  L+++L   G    S  ++  F    +SAVK FQ  H L   G+V ++
Sbjct: 230 TLRLNNHGDAVSSLQQKLKDLGYYTSS--ITGTFGPQTDSAVKDFQRAHNLVADGIVGAN 287

Query: 161 TLEAMN 166
           T  A+ 
Sbjct: 288 TYRALA 293



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G +S +VQ L++ L  +G  + +      +      AV+ FQ +  L   G+ 
Sbjct: 136 SNQVLRQGTTSGAVQELQQLLSRAGHFNSNAT--GYYGRVTTEAVRAFQRQQNLTVDGIA 193

Query: 158 DSSTLEAMN 166
              T+ A+ 
Sbjct: 194 GPKTITALQ 202



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G +  +V  ++ +L   G    +      +    E AV+ FQ + GL   G+   +T
Sbjct: 326 LRIGTTGAAVTNMQAQLRTIGLFGQAPT--GYYGTVTEQAVRAFQRQQGLTVDGIAGPAT 383

Query: 162 LEAMNV 167
           L  +  
Sbjct: 384 LGKLQQ 389



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G        +  + +    AVK FQ  +GL  +G
Sbjct: 44  ALGDQALSEGMNDPDVKDLQKALKDRGHF-NYHTATGYYGSITTEAVKAFQKANGLPATG 102

Query: 156 MVDSSTLEAMN 166
             D +TL  + 
Sbjct: 103 NADLATLAQLT 113


>gi|260775196|ref|ZP_05884094.1| general secretion pathway protein A [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608897|gb|EEX35059.1| general secretion pathway protein A [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 536

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 47/170 (27%), Gaps = 11/170 (6%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID-SDIPIISKETIAQT 78
           L             S     +N    + V          +        +   S + +  T
Sbjct: 370 LCQQSDQSAFRCTQSR--GTLNTLRQANVPVLLSLSKDSLQSYAVLYKLTQNSAQLLLGT 427

Query: 79  EK------AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E+       +           W     + L    S  ++  L +RL     L   +  S 
Sbjct: 428 ERIELPISKLKELWQGQYHQIWQGYWHQTLKPNMSGRAIAELDDRLSKV--LGEPERESD 485

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            +D  +   V+LFQ   GL   G+    TL+ +          L  +  +
Sbjct: 486 VYDQELMRKVELFQQWQGLHVDGIAGRRTLQRLEKLSQEHAPSLTASEEK 535


>gi|326442995|ref|ZP_08217729.1| hypothetical protein SclaA2_18108 [Streptomyces clavuligerus ATCC
           27064]
          Length = 326

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 11/140 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+ RL   G    +      +      AV+ FQ + GL  +G+ D++T   
Sbjct: 117 GAQGPRVRELQARLAQIGWFGSAPT--GFYGRLTADAVRGFQGKRGLSVTGLTDTTTWRK 174

Query: 165 MN----VPVDL-----RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +      P        R   ++       +L  + +  R + ++    SL  V +G V  
Sbjct: 175 LRGMTTAPTAEELSGTRKDPVKAAHKPRPRLDPRCLNGRVLCISKTTRSLSWVVDGTVRS 234

Query: 216 RSTVIVGRVDRQTPILHSRI 235
              V  G     T      +
Sbjct: 235 TMDVRFGAEYTPTREGVFSV 254


>gi|317130716|ref|YP_004096998.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
 gi|315475664|gb|ADU32267.1| NLP/P60 protein [Bacillus cellulosilyticus DSM 2522]
          Length = 542

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 17/141 (12%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRP----------LHLGNSSVSVQRLRERLII 120
             +T    E+A+               P             L +G S V V  L+ RL +
Sbjct: 307 GPQTFQALERALT-----EKNNPSSTTPTSNNNANADATTLLRVGQSGVGVTELQARLKV 361

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            G           F    ++A+  FQ   GL   G+V  ST + ++    + ++ ++  L
Sbjct: 362 LGYFKQEPT--GFFGDITKNALTQFQKDWGLVSDGLVTQSTWDKLDEVSAVHLKTVETML 419

Query: 181 MRIKKLLEQKMGLRYVLVNIP 201
            +        +      + +P
Sbjct: 420 PKTSFNPLNLVADAGNFIGVP 440



 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G  S  V  L+E+L   G        +  F      AV+ FQ  + L   G+V  
Sbjct: 35  KTLSFGVKSNDVVVLQEQLKEKGYF-NYPTATGYFGEVTRKAVQDFQRANNLKADGIVGP 93

Query: 160 STLEAMNVPVDLRIRQ 175
            T  A+     ++  Q
Sbjct: 94  RTFAALANTTSVQPTQ 109



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V+ ++  L  +G  +    ++  +    +  V+ FQ   GL   G+ 
Sbjct: 135 TTNVLRVGSRGKDVEAVQTILKKTGFFNHDA-ITGYYGTITQEGVRNFQRARGLKVDGIA 193

Query: 158 DSSTLEAMNV 167
              T+ A+N 
Sbjct: 194 GPQTIAALNK 203



 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+  L   G       ++  F     +AV+ FQ  + L   G+    T
Sbjct: 253 LREGSQGEQVRTLQTALKELGYF--QGDVTTIFGPITRNAVRSFQQANSLKVDGVAGPQT 310

Query: 162 LEAMNVPVDLR 172
            +A+   +  +
Sbjct: 311 FQALERALTEK 321


>gi|319409155|emb|CBI82799.1| putative Peptidoglycan-binding domain 1 protein [Bartonella
           schoenbuchensis R1]
          Length = 395

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG     V+ L++RL   G       +   +     SA+  FQ  H L+  G
Sbjct: 214 SVRANGLRLGCKGYRVEALQKRLNDLGY---PVAIDSDYGPDTRSAIFSFQADHNLEVDG 270

Query: 156 MVDSSTLEAMNV-PVDLRIRQLQVNLMRIK 184
           +V + T EA++V    +  R+  V++  ++
Sbjct: 271 VVGTKTQEALDVATPMISPRRSGVSIADLR 300


>gi|302556105|ref|ZP_07308447.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302473723|gb|EFL36816.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 83

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G +   V  L++RL+   D+      S ++D  + +AV  FQ+ +G+     G+
Sbjct: 6   AGTLREGATGPEVTELQQRLLRIPDVYRDGATSGSYDPTLTAAVARFQLWYGIRGDETGV 65

Query: 157 VDSSTLEAMN 166
             + T  A+ 
Sbjct: 66  YGNDTRAALE 75


>gi|213422205|ref|ZP_03355271.1| hypothetical protein Salmonentericaenterica_32498 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 61

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 371 VVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLD 413
            +K   T  V +   +PV+  Y++A+   D  +Q+R DIY  D
Sbjct: 1   ALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYD 43


>gi|170769767|ref|ZP_02904220.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia albertii TW07627]
 gi|170121381|gb|EDS90312.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia albertii TW07627]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 44/179 (24%)

Query: 192 GLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRS 249
             + ++VN+    L     +        V +G   R+TP    + + R    P W    +
Sbjct: 94  ARKGIVVNVAEMRLYYYPPDSNTVEVFPVGIGEAGRETPRNWVTTVERKQEAPTWTPTPN 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
             ++                                    +    +       G  N M 
Sbjct: 154 TRRE-----------------------------------YAKRGESLPAFVPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              I          H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 179 LYAIYIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|15616210|ref|NP_244515.1| hypothetical protein BH3648 [Bacillus halodurans C-125]
 gi|10176272|dbj|BAB07367.1| BH3648 [Bacillus halodurans C-125]
          Length = 1113

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 13/160 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  RPL LG     V +L++ L  +G    +      F     + +K FQ  H L  +G
Sbjct: 664 ALATRPLQLGMYHPDVVQLKKDLAKAGYFVSNNPND-YFGPTTTTKLKEFQTDHNLPATG 722

Query: 156 MVDSSTLEAMNVPVDLRIRQLQ----------VNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           + D  TL  +   V     Q            V + +       + G  Y  +     + 
Sbjct: 723 IADRQTLNKIKEVVQAIGVQYVFQGKRQFGHGVGMTQWGAYGMSQQGFTYRQILTYYYTD 782

Query: 206 EAVENGKVGLRS--TVIVGRVDRQTPILHSRINRIMFNPY 243
             V +      +   V++G     +    S     + N  
Sbjct: 783 VTVSSSSSYRNTNVRVMIGDEQINSATFSSTGTYSVQNIS 822



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
           +   +   V D  + +    + +          D       P+  ++             
Sbjct: 317 LSGVLFLGVRDSKVIDLKKMLAD----LGYGVSDNPTTYFGPVTEEQVKRFQNDFGRPVT 372

Query: 87  DILSRGGWPEL-----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            ++ R  +  +         L  G +   V +L+E L I G    S   +  F +  E+ 
Sbjct: 373 GVVDRATFEFIQKMVEEGFVLRSGMNHPEVLKLKEYLAILGY-RVSNTPNDFFGSVTEAK 431

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           V+ +Q  +GL  +G+V    L  +       ++
Sbjct: 432 VREYQYDNGLQQTGIVTKQLLTELEKQATGPLK 464



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 8/168 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              PL LG     V +L+  L   G    S   +  F    +  V+ FQ   GL   G+V
Sbjct: 247 ATGPLRLGMYREDVIQLKINLEKVGF-PVSSNPNTYFGPTTDRQVRAFQQSQGLTADGIV 305

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL-- 215
            SST++A+   +   +  L V   ++  L +    L Y + + P      V   +V    
Sbjct: 306 GSSTIKALEEALSGVLF-LGVRDSKVIDLKKMLADLGYGVSDNPTTYFGPVTEEQVKRFQ 364

Query: 216 --RSTVIVGRVDRQTPILHSRI--NRIMFNPYWVIPRSIIQKDMMALL 259
                 + G VDR T     ++     +       P  +  K+ +A+L
Sbjct: 365 NDFGRPVTGVVDRATFEFIQKMVEEGFVLRSGMNHPEVLKLKEYLAIL 412



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 12/120 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +G+    +  ++  L I G    +   S  +    E  V+ FQ ++ L  +G VD  T
Sbjct: 181 FQVGDRDPEIITIKLHLEILGFKVSNNPTS-YYGIQTEEMVRAFQSQYQLPVTGKVDQET 239

Query: 162 LEAMNVPVDLRIR---------QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
              ++      +R         QL++NL ++   +       +         + A +  +
Sbjct: 240 RNLLSQRATGPLRLGMYREDVIQLKINLEKVGFPVSSNPNTYFG--PTTDRQVRAFQQSQ 297



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 10/95 (10%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           ++T   T++ +   +              PL +G        L+E+L   G +  +   +
Sbjct: 442 QQTGIVTKQLLTELEKQA---------TGPLKMGMYREDAITLKEQLAALGYVISNNPTN 492

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             +    E+ VK FQ  HGL  +G+ DS TL+ + 
Sbjct: 493 -YYGPSTEATVKQFQKDHGLQVNGIADSLTLKKIQ 526



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  +  +  L+E L I G           + A     V+ FQ ++GL  +G+ D  T++ 
Sbjct: 603 GMRASGIITLKEHLAILGFRVSDNPT-TLYGAVTTEQVRQFQQKYGLSSTGIADQKTVDQ 661

Query: 165 MNVPVDLRIRQ 175
           +       ++ 
Sbjct: 662 LRALATRPLQL 672



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 4/121 (3%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLG 105
                      +   +   P          +        I       ++     + L+ G
Sbjct: 477 EQLAALGYVISNNPTNYYGPSTEATVKQFQKDHGLQVNGIADSLTLKKIQELLNQTLYFG 536

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +  V  L+  L   G L  S   +  F +  E  V+ F+ R  L  +G+V+   L+ M
Sbjct: 537 VRNDKVVELKLELERLG-LSVSSSPTTYFGSVTEEMVREFKRRANLPVTGVVNDEQLKFM 595

Query: 166 N 166
            
Sbjct: 596 K 596



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMV 157
             L LG    +V  L++ L     L+     S    FD  +E  +   Q     +PSG V
Sbjct: 41  ETLKLGVDHQNVLVLKQVLYSLEYLESDDPESFTTYFDPDLEQVIVDLQEMFQFEPSGEV 100

Query: 158 D 158
            
Sbjct: 101 T 101


>gi|257867798|ref|ZP_05647451.1| carboxyl-terminal protease [Enterococcus casseliflavus EC30]
 gi|257874125|ref|ZP_05653778.1| carboxyl-terminal protease [Enterococcus casseliflavus EC10]
 gi|257801881|gb|EEV30784.1| carboxyl-terminal protease [Enterococcus casseliflavus EC30]
 gi|257808289|gb|EEV37111.1| carboxyl-terminal protease [Enterococcus casseliflavus EC10]
          Length = 476

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLKALGY----ATSGDTFNDETTAAVKAFQEAHNLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 ATGEVDADTAQAIEKEVAEKLK 460


>gi|294814609|ref|ZP_06773252.1| Lipoprotein [Streptomyces clavuligerus ATCC 27064]
 gi|294327208|gb|EFG08851.1| Lipoprotein [Streptomyces clavuligerus ATCC 27064]
          Length = 344

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+ RL   G    +      +      AV+ FQ + GL  +G+ D++T   
Sbjct: 135 GAQGPRVRELQARLAQIGWFGSAPT--GFYGRLTADAVRGFQGKRGLSVTGLTDTTTWRK 192

Query: 165 MN----VPVDLRIRQLQVNLMRIKKLLEQKMGLRY-----VLVNIPAASLEAVENGKVGL 215
           +      P    +   + + ++       ++  R      + ++    SL  V +G V  
Sbjct: 193 LRGMTTAPTAEELSGTRKDPVKAAHKPRPRLDPRCLNGRVLCISKTTRSLSWVVDGTVRS 252

Query: 216 RSTVIVGRVDRQTPILHSRI 235
              V  G     T      +
Sbjct: 253 TMDVRFGAEYTPTREGVFSV 272


>gi|319949441|ref|ZP_08023502.1| N-acetylmuramoyl-L-alanine amidase cwlM [Dietzia cinnamea P4]
 gi|319436903|gb|EFV91962.1| N-acetylmuramoyl-L-alanine amidase cwlM [Dietzia cinnamea P4]
          Length = 396

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 15/122 (12%)

Query: 103 HLGNSSVSVQRLRERLIISGDL--------------DPSKGLSVAFDAYVESAVKLFQMR 148
             G+    V  +R  L   G L                       FDA +E+AV  FQ  
Sbjct: 4   RRGDRGPEVAAIRATLAGMGLLHNIDSVGVTEPETGSVLARTDAVFDADLETAVLAFQQA 63

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
            GL   G+V  +T  A++      +    ++ +  K +    +      +         V
Sbjct: 64  RGLISDGIVGPATQAALD-DASHVLGTRDLSYIVSKPMAGDDVAQLQRRLGELGFYAGLV 122

Query: 209 EN 210
           + 
Sbjct: 123 DG 124



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   V +L+ RL   G       +   F A   +AV  FQ    L+  G+V + TL+ +
Sbjct: 100 MAGDDVAQLQRRLGELGFYA--GLVDGTFGALTHAAVTDFQRDCALEADGVVGAETLDTI 157

Query: 166 NV 167
           N 
Sbjct: 158 NR 159


>gi|238913775|ref|ZP_04657612.1| hypothetical protein SentesTe_21948 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
          Length = 309

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|238895496|ref|YP_002920231.1| hypothetical protein KP1_3568 [Klebsiella pneumoniae NTUH-K2044]
 gi|238547813|dbj|BAH64164.1| hypothetical protein KP1_3568 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPALVPPGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 227


>gi|331668678|ref|ZP_08369526.1| protein ErfK/srfK [Escherichia coli TA271]
 gi|331063872|gb|EGI35783.1| protein ErfK/srfK [Escherichia coli TA271]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|26248328|ref|NP_754368.1| hypothetical protein c2476 [Escherichia coli CFT073]
 gi|91211241|ref|YP_541227.1| hypothetical protein UTI89_C2228 [Escherichia coli UTI89]
 gi|110642158|ref|YP_669888.1| hypothetical protein ECP_1988 [Escherichia coli 536]
 gi|227885541|ref|ZP_04003346.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|237704406|ref|ZP_04534887.1| erfK/srfK [Escherichia sp. 3_2_53FAA]
 gi|300936517|ref|ZP_07151433.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 21-1]
 gi|300985217|ref|ZP_07177324.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 200-1]
 gi|300992316|ref|ZP_07179860.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 45-1]
 gi|301051399|ref|ZP_07198212.1| ErfK/YbiS/YcfS/YnhG- like protein [Escherichia coli MS 185-1]
 gi|306814895|ref|ZP_07449057.1| hypothetical protein ECNC101_22677 [Escherichia coli NC101]
 gi|331647595|ref|ZP_08348687.1| protein ErfK/srfK [Escherichia coli M605]
 gi|26108732|gb|AAN80935.1|AE016762_188 Protein erfK/srfK precursor [Escherichia coli CFT073]
 gi|91072815|gb|ABE07696.1| hypothetical protein UTI89_C2228 [Escherichia coli UTI89]
 gi|110343750|gb|ABG69987.1| protein ErfK/SrfK precursor [Escherichia coli 536]
 gi|226900772|gb|EEH87031.1| erfK/srfK [Escherichia sp. 3_2_53FAA]
 gi|227837481|gb|EEJ47947.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 83972]
 gi|300296969|gb|EFJ53354.1| ErfK/YbiS/YcfS/YnhG- like protein [Escherichia coli MS 185-1]
 gi|300306560|gb|EFJ61080.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 200-1]
 gi|300406834|gb|EFJ90372.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 45-1]
 gi|300458345|gb|EFK21838.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 21-1]
 gi|305852289|gb|EFM52741.1| hypothetical protein ECNC101_22677 [Escherichia coli NC101]
 gi|307554029|gb|ADN46804.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ABU 83972]
 gi|307626503|gb|ADN70807.1| hypothetical protein UM146_07050 [Escherichia coli UM146]
 gi|315286927|gb|EFU46344.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 110-3]
 gi|315290147|gb|EFU49528.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 153-1]
 gi|324010299|gb|EGB79518.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 60-1]
 gi|331043319|gb|EGI15457.1| protein ErfK/srfK [Escherichia coli M605]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGKLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|209919465|ref|YP_002293549.1| hypothetical protein ECSE_2274 [Escherichia coli SE11]
 gi|209912724|dbj|BAG77798.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|324119031|gb|EGC12920.1| ykud domain-containing protein [Escherichia coli E1167]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGMYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|118470140|ref|YP_891129.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118171427|gb|ABK72323.1| N-acetylmuramoyl-L-alanine amidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 396

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHGL 151
             L  G+   +V  +R  L   G ++                FD  ++ AV+ FQ   GL
Sbjct: 2   SSLRRGDRGGAVTEIRAALAALGLIENPDTDLSTGRHVALDVFDDELDHAVRAFQQHRGL 61

Query: 152 DPSGMVDSSTLEAMN 166
              G+V  +T  A+ 
Sbjct: 62  LVDGIVGEATYRALR 76



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 69  IISKETIAQTEKAIAFY--QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           I+ + T     +A      + +  + G P               V  L+ RL   G    
Sbjct: 66  IVGEATYRALREASYRLGARILSHQFGAP----------MYGDDVATLQARLQDLGFY-- 113

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  +   F     +A+  +Q  +GL P G+    TL ++
Sbjct: 114 TGLVDGYFGLQTHNALMSYQREYGLYPDGICGPETLRSL 152


>gi|157155230|ref|YP_001463333.1| hypothetical protein EcE24377A_2272 [Escherichia coli E24377A]
 gi|170681366|ref|YP_001743204.1| hypothetical protein EcSMS35_1134 [Escherichia coli SMS-3-5]
 gi|187731449|ref|YP_001879647.1| hypothetical protein SbBS512_E0968 [Shigella boydii CDC 3083-94]
 gi|191167721|ref|ZP_03029529.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli B7A]
 gi|194428777|ref|ZP_03061313.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli B171]
 gi|260844589|ref|YP_003222367.1| hypothetical protein ErfK [Escherichia coli O103:H2 str. 12009]
 gi|293446362|ref|ZP_06662784.1| hypothetical protein ECCG_00510 [Escherichia coli B088]
 gi|157077260|gb|ABV16968.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E24377A]
 gi|170519084|gb|ACB17262.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli SMS-3-5]
 gi|187428441|gb|ACD07715.1| ErfK/YbiS/YcfS/YnhG family protein [Shigella boydii CDC 3083-94]
 gi|190902234|gb|EDV61975.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli B7A]
 gi|194413224|gb|EDX29510.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli B171]
 gi|257759736|dbj|BAI31233.1| conserved hypothetical protein ErfK [Escherichia coli O103:H2 str.
           12009]
 gi|291323192|gb|EFE62620.1| hypothetical protein ECCG_00510 [Escherichia coli B088]
 gi|323161918|gb|EFZ47792.1| hypothetical protein ECE128010_1879 [Escherichia coli E128010]
 gi|323183766|gb|EFZ69157.1| hypothetical protein ECOK1357_2747 [Escherichia coli 1357]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|92110337|emb|CAJ87605.1| putative exported protein ErfK [Escherichia coli]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|15616227|ref|NP_244532.1| N-acetylmuramoyl-L-alanine amidase (major autolysin) [Bacillus
           halodurans C-125]
 gi|10176289|dbj|BAB07384.1| N-acetylmuramoyl-L-alanine amidase (major autolysin) [Bacillus
           halodurans C-125]
          Length = 588

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 8/145 (5%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMG---IDSDIPIISKETIAQTEKAI-- 82
              +        + +    +    F    +  +      +S +    + T   T   I  
Sbjct: 252 PATLRFGDRHPYVIQLKKDLAEAGFPVSGSPTEYFGSVTESQVKAF-QRTYGLTVDGIVG 310

Query: 83  -AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            A Y  +             L  G+    V +L++ L   G    S   +  F +  ES 
Sbjct: 311 SATYSKLDEVLKNGTGRPATLRFGDRHPYVIQLKKDLAEVGF-PVSGSPTEYFGSVTESQ 369

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMN 166
           VK FQ  +GL   G+V S+T   ++
Sbjct: 370 VKAFQRAYGLTADGIVGSATYSKLD 394



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 55/171 (32%), Gaps = 23/171 (13%)

Query: 14  FFVYLILPMGLSLV----------EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI 63
           F  +++  + L L            + +     D  + +    +    F       D   
Sbjct: 3   FHKFIVFCIALLLSFVLWSNETAQAQVLKLGTYDTAVIQLKIDLEKAGFKV----SDNPT 58

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGW--------PELPIRPLHLGNSSVSVQRLR 115
               P   ++     +        I                +    L  G+    V +L+
Sbjct: 59  TYFGPTTEQKVKEFQQAYGLTVDGIAGPATLSKLDEVVRGTVRPATLRFGDRHPYVIQLK 118

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + L  +G    S   +  F +  ES VK FQ  HGL  +G+V+S+T   ++
Sbjct: 119 KDLAEAGF-PVSGSPTEYFGSVTESQVKAFQRAHGLTANGVVESATYAKLD 168



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V +L++ L  +G    S   +  F +  ES VK FQ  HGL  +G+V S+
Sbjct: 179 TLRFGDRHPYVIQLKKDLAEAGF-PVSGSPTEYFGSVTESQVKAFQRAHGLTANGVVGSA 237

Query: 161 TLEAMN 166
           T   ++
Sbjct: 238 TYAKLD 243


>gi|220931154|ref|YP_002508062.1| Spore cortex-lytic enzyme SleB [Halothermothrix orenii H 168]
 gi|219992464|gb|ACL69067.1| Spore cortex-lytic enzyme SleB [Halothermothrix orenii H 168]
          Length = 239

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S  +V+ ++ +L   G       +   F      AV+ FQ ++GL   G+V   T  A
Sbjct: 46  GTSGSNVRLVQWKLQQWGYY--EGRIDGYFGPETSEAVREFQRKNGLRVDGLVGPQTWAA 103

Query: 165 M--NVPVDLRIRQLQVNLMR 182
           +          RQ    + R
Sbjct: 104 LGYEARPTTYARQTAAAVSR 123


>gi|332709903|ref|ZP_08429859.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351274|gb|EGJ30858.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 140

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              L  G     V+ L++ L    G       L   ++    +A+K FQ+++ L   G+V
Sbjct: 66  APTLRPGQQGDKVRILQKLLLKKYGYRQKQVPLDGTYNDGTVAAIKKFQLKNSLSADGIV 125

Query: 158 DSSTLE 163
              T +
Sbjct: 126 GPQTWK 131


>gi|229097030|ref|ZP_04227998.1| hypothetical protein bcere0020_22760 [Bacillus cereus Rock3-29]
 gi|228686426|gb|EEL40336.1| hypothetical protein bcere0020_22760 [Bacillus cereus Rock3-29]
          Length = 1027

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 98   PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            P   + LG+    V++++ RL           +   FD+  +  VK FQ R  L   G+V
Sbjct: 939  PGHVVKLGDKGAEVKKIQARLNEEN---IDVNIDGIFDSNTQMKVKEFQKRFELQVDGIV 995

Query: 158  DSSTL 162
               T 
Sbjct: 996  GPETW 1000


>gi|191170031|ref|ZP_03031585.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli F11]
 gi|218699444|ref|YP_002407073.1| hypothetical protein ECIAI39_1058 [Escherichia coli IAI39]
 gi|190909547|gb|EDV69132.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli F11]
 gi|218369430|emb|CAR17193.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli IAI39]
 gi|281179058|dbj|BAI55388.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294493197|gb|ADE91953.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli IHE3034]
 gi|323956268|gb|EGB52014.1| ykud domain-containing protein [Escherichia coli H263]
 gi|330911799|gb|EGH40309.1| l,D-transpeptidase ErfK [Escherichia coli AA86]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGKLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|75674351|ref|YP_316772.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74419221|gb|ABA03420.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 172

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 47/169 (27%), Gaps = 46/169 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V      L  + +    LR  V VGR  +Q     +RI     NP W  P  + +   
Sbjct: 41  IVVKTSERRLYLIIDSDRALRYPVGVGRAGKQ-WSGAARIEGKYRNPAWAPPAEVKR--- 96

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIE 314
                                               + P        G   N M    + 
Sbjct: 97  ------------------------------------DNPRIADVIPGGSPANPMGVAAMT 120

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTP 361
                   +H T  P       RF + GC+R+ N    DL   +   TP
Sbjct: 121 LSGGGQYAIHGTNRPGSIG---RFVSYGCIRMYNADIDDLYRRVSVGTP 166


>gi|218558848|ref|YP_002391761.1| hypothetical protein ECS88_2055 [Escherichia coli S88]
 gi|218365617|emb|CAR03348.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli S88]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|256017824|ref|ZP_05431689.1| hypothetical protein ShiD9_02837 [Shigella sp. D9]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|195939498|ref|ZP_03084880.1| hypothetical protein EscherichcoliO157_24328 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810757|ref|ZP_03252633.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|209400843|ref|YP_002271156.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|261226496|ref|ZP_05940777.1| hypothetical protein EscherichiacoliO157_18150 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254697|ref|ZP_05947230.1| hypothetical protein EscherichiacoliO157EcO_02605 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|208725273|gb|EDZ74980.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|209162243|gb|ACI39676.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|320189634|gb|EFW64291.1| L,D-transpeptidase ErfK [Escherichia coli O157:H7 str. EC1212]
 gi|320641447|gb|EFX10885.1| L,D-transpeptidase [Escherichia coli O157:H7 str. G5101]
 gi|320646819|gb|EFX15691.1| L,D-transpeptidase [Escherichia coli O157:H- str. 493-89]
 gi|320652096|gb|EFX20435.1| L,D-transpeptidase [Escherichia coli O157:H- str. H 2687]
 gi|320668182|gb|EFX35045.1| L,D-transpeptidase [Escherichia coli O157:H7 str. LSU-61]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|302390198|ref|YP_003826019.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
           16646]
 gi|302200826|gb|ADL08396.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosediminibacter oceani DSM
           16646]
          Length = 229

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  +++RL   G    +      + +    AVK FQ   GL  +G+VD 
Sbjct: 160 RTLVEGSRGSDVMEVQKRLANHGFY--NGSFDGIYGSGTREAVKAFQKAKGLKATGIVDE 217

Query: 160 STLEAMNV 167
           +T +A+ +
Sbjct: 218 ATYKALGI 225



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVD-WNSPEP-PNFIFRQDPGKINAMASTKIEFYSRN 319
               L+   + M+D K  + F   V  +++P P   F   +         +  +      
Sbjct: 43  VIYALERKLVVMVDGKPFKTFPVAVGTFDTPTPIGLFRITEKSKWGEGFGTRWMRLSVPW 102

Query: 320 N-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIE 369
               +H T +P    +   F + GC+R+ N  +  L  W+   T  +    ++
Sbjct: 103 GTYGIHGTNKPHSIGS---FASHGCIRMHNRHVEQLYDWVKVGTKVYIVGGVD 152


>gi|298113087|gb|ADI58676.1| hypothetical protein [Streptomyces nodosus subsp. asukaensis]
          Length = 555

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 11/140 (7%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
            +      +      + +  +            S  P       A           ++  
Sbjct: 421 QSGSTGAQVKAVQQLLNDQGYPAGAVDG-----SFGPATKTAVAAFQAARGLSADGVVGP 475

Query: 92  GGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
             W  L        L  G S   V+RL+  L  +  L  + G+   F     +AV+ +Q 
Sbjct: 476 RTWTALLSAGTTPSLQQGASGDGVKRLQRSLTAA--LGTTVGIDGGFGPATVTAVRNYQT 533

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
             GL   G+V   T  A+  
Sbjct: 534 SRGLTADGIVGPDTWAALQT 553


>gi|258539612|ref|YP_003174111.1| carboxyl-terminal protease [Lactobacillus rhamnosus Lc 705]
 gi|257151288|emb|CAR90260.1| Carboxyl-terminal protease [Lactobacillus rhamnosus Lc 705]
          Length = 480

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKAL--KIGSATVNGQYDDATQAAVKSFQEANKLDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSDQLTK 466


>gi|229552197|ref|ZP_04440922.1| S41 family carboxy-terminal processing peptidase [Lactobacillus
           rhamnosus LMS2-1]
 gi|229314499|gb|EEN80472.1| S41 family carboxy-terminal processing peptidase [Lactobacillus
           rhamnosus LMS2-1]
          Length = 485

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 395 INATQLKPGDKGSDVKSLQQMLKAL--KIGSATVNGQYDDATQAAVKSFQEANKLDASGT 452

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 453 ADQDTLAALAQKLSDQLTK 471


>gi|199598686|ref|ZP_03212100.1| Periplasmic protease [Lactobacillus rhamnosus HN001]
 gi|199590374|gb|EDY98466.1| Periplasmic protease [Lactobacillus rhamnosus HN001]
          Length = 480

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKAL--KIGSATVNGQYDDATQAAVKSFQEANKLDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSDQLTK 466


>gi|333003591|gb|EGK23129.1| hypothetical protein SFK272_2677 [Shigella flexneri K-272]
 gi|333017508|gb|EGK36821.1| hypothetical protein SFK227_2425 [Shigella flexneri K-227]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|323187718|gb|EFZ73019.1| hypothetical protein ECRN5871_4061 [Escherichia coli RN587/1]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|320198672|gb|EFW73272.1| L,D-transpeptidase ErfK [Escherichia coli EC4100B]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|307312431|ref|ZP_07592065.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|306907602|gb|EFN38105.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli W]
 gi|315061278|gb|ADT75605.1| L,D-transpeptidase linking LPP to murein [Escherichia coli W]
 gi|323378142|gb|ADX50410.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli KO11]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|282555169|gb|ADA82684.1| L,D-transpeptidase [Candidatus Blochmannia nearcticus]
          Length = 332

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 60/208 (28%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPY 243
           L+        +++N     L    +     +   + +G ++  TP    + I +   NP 
Sbjct: 91  LILPNKPHSGIVINNAEMRLYYYPKKNDTVIVLPIAIGTIEHATPSQWITSIKQKKKNPI 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W IP   +  + M                                              G
Sbjct: 151 W-IPTKSMHDEYMKH----------------------------------GKILPTIFPAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M S  +          H T     F   +R  T GC+R+R   D+  +L    P  
Sbjct: 176 PNNPMGSYALYLGKYYAI--HGTNSN--FGIGLR-VTRGCIRLR-PQDI-EYLFNIVPIG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           ++       I+  ++T     +++   +
Sbjct: 229 TKVQFINEPIKSTIETNGMQYLEVHNPL 256


>gi|218554565|ref|YP_002387478.1| hypothetical protein ECIAI1_2070 [Escherichia coli IAI1]
 gi|218361333|emb|CAQ98919.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli IAI1]
          Length = 310

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|117624178|ref|YP_853091.1| hypothetical protein APECO1_6023 [Escherichia coli APEC O1]
 gi|256022346|ref|ZP_05436211.1| hypothetical protein E4_03144 [Escherichia sp. 4_1_40B]
 gi|301018085|ref|ZP_07182636.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 69-1]
 gi|115513302|gb|ABJ01377.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli APEC O1]
 gi|300399866|gb|EFJ83404.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 69-1]
 gi|320657691|gb|EFX25483.1| L,D-transpeptidase [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320663374|gb|EFX30674.1| L,D-transpeptidase [Escherichia coli O55:H7 str. USDA 5905]
          Length = 311

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|323168887|gb|EFZ54567.1| hypothetical protein SS53G_1216 [Shigella sonnei 53G]
          Length = 310

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|308174184|ref|YP_003920889.1| hypothetical protein BAMF_2293 [Bacillus amyloliquefaciens DSM 7]
 gi|307607048|emb|CBI43419.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
 gi|328554128|gb|AEB24620.1| hypothetical protein BAMTA208_12285 [Bacillus amyloliquefaciens
           TA208]
 gi|328912519|gb|AEB64115.1| hypothetical protein LL3_02582 [Bacillus amyloliquefaciens LL3]
          Length = 176

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 44/165 (26%), Gaps = 57/165 (34%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  Y++VN    +L  V++ ++     V  G+ D  TP     +     NP     
Sbjct: 21  NPLPGDPYIIVNKATNALAVVKDNRIEGIYQVATGKTDDLTPEGEFTVTVKAVNP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  N                             +     N 
Sbjct: 76  -----------------YYRKKN----------------------------VEGGAPENP 90

Query: 308 MASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    I F           +H T    L      F ++GC+R++N
Sbjct: 91  LGVRWIGFDARGTDGRIYGIHGTNREELIG---GFVSNGCIRMKN 132


>gi|331673538|ref|ZP_08374301.1| protein ErfK/srfK [Escherichia coli TA280]
 gi|331068811|gb|EGI40203.1| protein ErfK/srfK [Escherichia coli TA280]
          Length = 311

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|332278846|ref|ZP_08391259.1| ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
 gi|332101198|gb|EGJ04544.1| ErfK/YbiS/YcfS/YnhG family protein [Shigella sp. D9]
          Length = 310

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|15802471|ref|NP_288497.1| hypothetical protein Z3150 [Escherichia coli O157:H7 EDL933]
 gi|15832039|ref|NP_310812.1| hypothetical protein ECs2785 [Escherichia coli O157:H7 str. Sakai]
 gi|189010742|ref|ZP_02809080.2| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189403413|ref|ZP_02795306.2| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|208816755|ref|ZP_03257875.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818653|ref|ZP_03258973.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|217329581|ref|ZP_03445660.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254793692|ref|YP_003078529.1| hypothetical protein ECSP_2655 [Escherichia coli O157:H7 str.
           TW14359]
 gi|12516167|gb|AAG57051.1|AE005425_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13362253|dbj|BAB36208.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|188998695|gb|EDU67681.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189360771|gb|EDU79190.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|208731098|gb|EDZ79787.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738776|gb|EDZ86458.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209748326|gb|ACI72470.1| hypothetical protein ECs2785 [Escherichia coli]
 gi|209748328|gb|ACI72471.1| hypothetical protein ECs2785 [Escherichia coli]
 gi|209748330|gb|ACI72472.1| hypothetical protein ECs2785 [Escherichia coli]
 gi|217317349|gb|EEC25778.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|254593092|gb|ACT72453.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli O157:H7 str. TW14359]
 gi|326340064|gb|EGD63869.1| L,D-transpeptidase ErfK [Escherichia coli O157:H7 str. 1044]
 gi|326346477|gb|EGD70213.1| L,D-transpeptidase ErfK [Escherichia coli O157:H7 str. 1125]
          Length = 310

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|330946579|gb|EGH47586.1| ErfK/YbiS/YcfS/YnhG [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 159

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 6/65 (9%)

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNII 350
                     G  N +   K          +H + +   F   +R  + GC R+   N++
Sbjct: 1   GDPLPDVVPAGPDNPLGPFKFGLGLS-GYLIHGSNKK--FGIGMRT-SHGCFRMYNNNVL 56

Query: 351 DLDVW 355
           +L   
Sbjct: 57  ELADM 61


>gi|291283218|ref|YP_003500036.1| hypothetical protein G2583_2500 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290763091|gb|ADD57052.1| Conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli O55:H7 str. CB9615]
 gi|323952485|gb|EGB48358.1| ykud domain-containing protein [Escherichia coli H252]
          Length = 310

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|82777468|ref|YP_403817.1| hypothetical protein SDY_2243 [Shigella dysenteriae Sd197]
 gi|309787915|ref|ZP_07682525.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|81241616|gb|ABB62326.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
 gi|308924314|gb|EFP69811.1| conserved hypothetical protein [Shigella dysenteriae 1617]
 gi|323936971|gb|EGB33252.1| ykud domain-containing protein [Escherichia coli E1520]
          Length = 310

 Score = 65.4 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|325292051|ref|YP_004277915.1| hypothetical protein AGROH133_04195 [Agrobacterium sp. H13-3]
 gi|325059904|gb|ADY63595.1| hypothetical protein AGROH133_04195 [Agrobacterium sp. H13-3]
          Length = 274

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 47/211 (22%)

Query: 145 FQMRHGL----DPSGMVDSS---TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           FQ R         SG+          A   P      Q+    +      +       ++
Sbjct: 85  FQQRQAAMPQRPSSGVTSQRPARVQNAAVRPNAPVRTQIAPQFLPQIVSYQTTQKPGTIV 144

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           ++ P   L  V       R  V VG+   +      ++ R    P W  P+ +I ++   
Sbjct: 145 IDTPNRFLYLVMADGKARRYGVGVGKPGFE-WAGTHKVTRKAEWPSWTPPKEMISRE--- 200

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                                           + +        + G  N M +  +    
Sbjct: 201 --------------------------------ATKGHYLPAFMEGGPANPMGARAMYLG- 227

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                +H T +P    +     +SGC+R+RN
Sbjct: 228 STLYRIHGTNQPWTIGSNN---SSGCIRMRN 255


>gi|325291306|ref|YP_004267487.1| Peptidoglycan-binding domain 1 protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324966707|gb|ADY57486.1| Peptidoglycan-binding domain 1 protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 258

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 17/147 (11%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        + E    + N  F+        G  +   ++S +T     K ++    I+
Sbjct: 116 TLREGSRGASVRELQTLLSNHGFNPGPIDGIFGPRTRAAVVSFQT----SKGLSP-DGIV 170

Query: 90  SRGGW----------PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
               W          P      L  G+   SV+ L+ RL   G       +   F +  +
Sbjct: 171 GPRTWAALGVNCTSSPSTKCPTLRRGSRGSSVRTLQTRLNNQGF--NPGPIDGIFGSRTQ 228

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +AV  FQ    L P G+V   T  A+ 
Sbjct: 229 AAVIAFQNSRCLSPDGIVGRKTWAALG 255



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   SV+ L+  L   G       +   F     +AV  FQ   GL P G+V   
Sbjct: 116 TLREGSRGASVRELQTLLSNHGF--NPGPIDGIFGPRTRAAVVSFQTSKGLSPDGIVGPR 173

Query: 161 TLEAMNVP 168
           T  A+ V 
Sbjct: 174 TWAALGVN 181



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L +G++  +V  L+E L++ G       +   F    ++AV  FQ    L P 
Sbjct: 4   PPTNYPTLQIGSTGPAVVHLQESLVVQGF--DPGMIDGIFGPKTQAAVIAFQSCCCLVPD 61

Query: 155 GMVDSSTLEAMNVPVDLRIRQL 176
           G+V   T  A+       +  L
Sbjct: 62  GIVGPITWAALEAACPPPLDHL 83


>gi|293410342|ref|ZP_06653918.1| L,D-transpeptidase ErfK [Escherichia coli B354]
 gi|291470810|gb|EFF13294.1| L,D-transpeptidase ErfK [Escherichia coli B354]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|300905094|ref|ZP_07122900.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 84-1]
 gi|300921759|ref|ZP_07137924.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 182-1]
 gi|301307113|ref|ZP_07213145.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 124-1]
 gi|309798184|ref|ZP_07692551.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 145-7]
 gi|331677866|ref|ZP_08378541.1| protein ErfK/srfK [Escherichia coli H591]
 gi|284921978|emb|CBG35054.1| putative exported protein [Escherichia coli 042]
 gi|300403006|gb|EFJ86544.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 84-1]
 gi|300421847|gb|EFK05158.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 182-1]
 gi|300837679|gb|EFK65439.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 124-1]
 gi|308118234|gb|EFO55496.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 145-7]
 gi|315252446|gb|EFU32414.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 85-1]
 gi|331074326|gb|EGI45646.1| protein ErfK/srfK [Escherichia coli H591]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|20090011|ref|NP_616086.1| hypothetical protein MA1145 [Methanosarcina acetivorans C2A]
 gi|19914978|gb|AAM04566.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 320

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 36/67 (53%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S  +V++++E LII G   P  G    F    E AV+ +Q   GL   G++ +
Sbjct: 28  RVLGRGDSGPAVKKVQEALIILGIPVPKVGADGVFGGETELAVRSYQEARGLKVDGIIGA 87

Query: 160 STLEAMN 166
            T+ +++
Sbjct: 88  ETIGSLD 94


>gi|110805975|ref|YP_689495.1| hypothetical protein SFV_2062 [Shigella flexneri 5 str. 8401]
 gi|110615523|gb|ABF04190.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|323702591|ref|ZP_08114253.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
 gi|323532410|gb|EGB22287.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
          Length = 239

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V ++++RL   G    +  L   F + + +AV+ FQ  +GL   G+V   T +A
Sbjct: 44  GTSGDKVYQVQKRLKDWGYY--TGPLDGYFGSQMSAAVQKFQRYNGLTADGVVGEQTWQA 101

Query: 165 MN-VPVDLR 172
           +       R
Sbjct: 102 LGLATPAPR 110


>gi|293415295|ref|ZP_06657938.1| hypothetical protein ECDG_01852 [Escherichia coli B185]
 gi|291432943|gb|EFF05922.1| hypothetical protein ECDG_01852 [Escherichia coli B185]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|198284291|ref|YP_002220612.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|198248812|gb|ACH84405.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 53993]
          Length = 361

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 41/169 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  +     N +V     V V     +  +  +RI      P W +P++I    
Sbjct: 97  IIVDIPARRIYYFPVNDRVVYTYPVGVFLPGWKEALTDTRIIAKFKMPAWNVPKNIHA-- 154

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 155 ----------------------WFEKKFHMDIPWYW----------PPGPENPMGELAME 182

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                  ++H T  P      +R  + GC ++   N+  L   +   TP
Sbjct: 183 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQMFPENVAQLFPMVPVGTP 227


>gi|260868641|ref|YP_003235043.1| hypothetical protein ErfK [Escherichia coli O111:H- str. 11128]
 gi|257764997|dbj|BAI36492.1| conserved hypothetical protein ErfK [Escherichia coli O111:H- str.
           11128]
 gi|323177176|gb|EFZ62766.1| hypothetical protein ECOK1180_4544 [Escherichia coli 1180]
 gi|323948395|gb|EGB44380.1| ykud domain-containing protein [Escherichia coli H120]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|154685816|ref|YP_001420977.1| YkuD [Bacillus amyloliquefaciens FZB42]
 gi|154351667|gb|ABS73746.1| YkuD [Bacillus amyloliquefaciens FZB42]
          Length = 166

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 16/129 (12%)

Query: 236 NRIMFNPY--WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           + I+ N      IP SII       L      L      +       + V ++   +P  
Sbjct: 44  HIIIPNLPDPSTIPYSIIVYIGAKKLE-----LYRLGRLIRTY---PIAVGKILTTTPTG 95

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIID 351
             +I  + P       +  +     +   +H T  P          + GC+R+  +++ +
Sbjct: 96  EFYIVNRQPKPGGPFGAYWLSLSKIH-YGIHGTNNPSSIGK---AVSKGCIRMYNQDVTE 151

Query: 352 LDVWLLKDT 360
           L   +   T
Sbjct: 152 LAATVPNGT 160


>gi|320184160|gb|EFW58977.1| L,D-transpeptidase ErfK [Shigella flexneri CDC 796-83]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|301017423|ref|ZP_07182155.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 196-1]
 gi|299882723|gb|EFI90934.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 196-1]
 gi|323961843|gb|EGB57443.1| ykud domain-containing protein [Escherichia coli H489]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|253773068|ref|YP_003035899.1| hypothetical protein ECBD_1659 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|331652797|ref|ZP_08353803.1| protein ErfK/srfK [Escherichia coli M718]
 gi|253324112|gb|ACT28714.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|260448907|gb|ACX39329.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli DH1]
 gi|315136623|dbj|BAJ43782.1| hypothetical protein ECDH1ME8569_1926 [Escherichia coli DH1]
 gi|331049553|gb|EGI21624.1| protein ErfK/srfK [Escherichia coli M718]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|284034921|ref|YP_003384852.1| cell wall hydrolase/autolysin [Kribbella flavida DSM 17836]
 gi|283814214|gb|ADB36053.1| cell wall hydrolase/autolysin [Kribbella flavida DSM 17836]
          Length = 377

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R   +G+S  +V  +  +L   G L P  G    +D     AV+ FQ + GL   G+V 
Sbjct: 7   ARIYRIGDSGEAVAEIIGKLQRLGLLAP--GPRSVYDEETAHAVRGFQQQRGLMIDGIVG 64

Query: 159 SSTLEAMN 166
             T  A++
Sbjct: 65  PQTYRAID 72



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 13/100 (13%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPS 127
           ++       I+    +  +      LG+               V  L+ +L   G     
Sbjct: 53  QQRGLMIDGIVGPQTYRAIDDARWRLGDRLLTYVVSHPLTGDDVVALQAKLQELGF--AV 110

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +   F    + AV  FQ   GL   G    ST +A+  
Sbjct: 111 ARVDGIFGPDTQRAVTEFQRNMGLPADGTCGPSTFKALQR 150


>gi|215487204|ref|YP_002329635.1| hypothetical protein E2348C_2123 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312967213|ref|ZP_07781429.1| conserved hypothetical protein [Escherichia coli 2362-75]
 gi|215265276|emb|CAS09671.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli O127:H6 str. E2348/69]
 gi|312288021|gb|EFR15925.1| conserved hypothetical protein [Escherichia coli 2362-75]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|300951628|ref|ZP_07165454.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 116-1]
 gi|300449132|gb|EFK12752.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 116-1]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|229491220|ref|ZP_04385048.1| peptidoglycan-binding domain 1 protein [Rhodococcus erythropolis
           SK121]
 gi|229321958|gb|EEN87751.1| peptidoglycan-binding domain 1 protein [Rhodococcus erythropolis
           SK121]
          Length = 396

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 14/79 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG--------------LSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD  ++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTKLGYLHHGTSGIRRESADGAHWVAPDAIFDHQLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAMN 166
           + GL   G+V  +T  ++ 
Sbjct: 64  QRGLLVDGIVGPATYRSLR 82



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 15/124 (12%)

Query: 48  VNDRFDNFLARVDMGIDSDIPII-----SKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
            +  FD+ L            ++        T     +A   Y+ + +R    +L     
Sbjct: 46  PDAIFDHQLDSAVRAFQQQRGLLVDGIVGPATYRSLREA--SYR-LGARTLIYQLSAPLY 102

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V  L+ +L   G       +   F      ++  FQ   G+   G+    TL
Sbjct: 103 -----GDDVAALQAKLQDLGFYA--GRVDGFFGPQTHESLSSFQREIGIAADGICGPQTL 155

Query: 163 EAMN 166
            ++ 
Sbjct: 156 RSLE 159


>gi|16129931|ref|NP_416494.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89108811|ref|AP_002591.1| conserved hypothetical protein with NAD(P)-binding Rossmann-fold
           domain [Escherichia coli str. K-12 substr. W3110]
 gi|170081622|ref|YP_001730942.1| hypothetical protein ECDH10B_2134 [Escherichia coli str. K-12
           substr. DH10B]
 gi|218690048|ref|YP_002398260.1| hypothetical protein ECED1_2326 [Escherichia coli ED1a]
 gi|238901184|ref|YP_002926980.1| hypothetical protein BWG_1784 [Escherichia coli BW2952]
 gi|254161987|ref|YP_003045095.1| hypothetical protein ECB_01899 [Escherichia coli B str. REL606]
 gi|1175850|sp|P39176|ERFK_ECOLI RecName: Full=Probable L,D-transpeptidase ErfK/SrfK; Flags:
           Precursor
 gi|1008488|gb|AAA78909.1| unknown [Escherichia coli str. K-12 substr. W3110]
 gi|1736651|dbj|BAA15807.1| conserved hypothetical protein with NAD(P)-binding Rossmann-fold
           domain [Escherichia coli str. K12 substr. W3110]
 gi|1788299|gb|AAC75051.1| L,D-transpeptidase linking Lpp to murein [Escherichia coli str.
           K-12 substr. MG1655]
 gi|169889457|gb|ACB03164.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli str. K-12 substr. DH10B]
 gi|218427612|emb|CAR08388.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli ED1a]
 gi|238860592|gb|ACR62590.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli BW2952]
 gi|242377646|emb|CAQ32405.1| L,D-transpeptidase ErfK [Escherichia coli BL21(DE3)]
 gi|253973888|gb|ACT39559.1| conserved hypothetical protein with NAD(P)-binding Rossmann-fold
           domain [Escherichia coli B str. REL606]
 gi|253978082|gb|ACT43752.1| conserved protein with NAD(P)-binding Rossmann-fold domain
           [Escherichia coli BL21(DE3)]
 gi|332093060|gb|EGI98124.1| hypothetical protein SB521682_0999 [Shigella boydii 5216-82]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|167589013|ref|ZP_02381401.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           ubonensis Bu]
          Length = 277

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+    V  L+ RLI +G    +  ++  +DA  E+AV   Q + GL   G+   
Sbjct: 2   KTRRLGDHGDDVGLLQRRLIRAGY---AVQVTHIYDAATEAAVIALQRKTGLVDDGVAGP 58

Query: 160 STLEAMNVPVDLRIRQLQVNLMR 182
            T  A+             +L R
Sbjct: 59  KTYAALATGQRDPQHLALADLER 81


>gi|82543728|ref|YP_407675.1| hypothetical protein SBO_1213 [Shigella boydii Sb227]
 gi|81245139|gb|ABB65847.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|332096606|gb|EGJ01600.1| hypothetical protein SB359474_1352 [Shigella boydii 3594-74]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|52080005|ref|YP_078796.1| peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC
           14580]
 gi|52785379|ref|YP_091208.1| YkuD [Bacillus licheniformis ATCC 14580]
 gi|319646218|ref|ZP_08000448.1| spore protein ykuD [Bacillus sp. BT1B_CT2]
 gi|81385713|sp|Q65K99|YKUD_BACLD RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
           protein YkuD homolog
 gi|52003216|gb|AAU23158.1| Peptidoglycan-binding protein YkuD [Bacillus licheniformis ATCC
           14580]
 gi|52347881|gb|AAU40515.1| YkuD [Bacillus licheniformis ATCC 14580]
 gi|317391968|gb|EFV72765.1| spore protein ykuD [Bacillus sp. BT1B_CT2]
          Length = 165

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 50/151 (33%), Gaps = 10/151 (6%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
                +   + + +           + +  P    P +I  +  ++L  +  +  + + +
Sbjct: 17  ADFRTTRQALLQANPGLNGGQVSAGQSIIIPGIRNPDTIPYRIAVSLNGRTLRLYERDRL 76

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                K   + V ++   +P     I  + P       +  +    ++   +H T  P  
Sbjct: 77  V----KTYPIAVGKILTQTPRGEFVIVNRQPNPGGPFGAYWLSLSKQH-YGIHGTNNPSS 131

Query: 332 FNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                   + GC+R+ N  +++L   +   T
Sbjct: 132 IGK---AVSRGCIRMHNRDVLELASIVPNGT 159


>gi|262043472|ref|ZP_06016595.1| LysM domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039214|gb|EEW40362.1| LysM domain protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 300

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 53/172 (30%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 87  IVINVAEMRLYYYPPLGNSVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 145

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E         PG  N M    I
Sbjct: 146 E----------------------------------YAKEGKTLPALVPPGPDNPMGLYAI 171

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 172 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKFLFDNVPVGTR 216


>gi|17229661|ref|NP_486209.1| hypothetical protein alr2169 [Nostoc sp. PCC 7120]
 gi|17131260|dbj|BAB73868.1| alr2169 [Nostoc sp. PCC 7120]
          Length = 160

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 87  DILSRGGWPELPIRP------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            I+    W  L          L  G+    V+ L++RL  +G    +  +   F    E+
Sbjct: 70  GIVGYKTWQALYEGRVIDLPILKYGSQGELVKALQQRLQNAGYY--TGLVDGDFSLVTEA 127

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            VK FQ+R+ L   G+V   T   ++   
Sbjct: 128 GVKSFQLRNNLKVDGIVGDRTWAVLSNTP 156



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L+  L        S  +    D+     V LFQ R  +   G+V   
Sbjct: 18  TLKQGDTGEVVKELQRLLRS--YYCYSGPIDGVLDSETVGGVILFQHRVFIPEDGIVGYK 75

Query: 161 TLEAM 165
           T +A+
Sbjct: 76  TWQAL 80


>gi|323940709|gb|EGB36899.1| ykud domain-containing protein [Escherichia coli E482]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|197123397|ref|YP_002135348.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
 gi|196173246|gb|ACG74219.1| ErfK/YbiS/YcfS/YnhG family protein [Anaeromyxobacter sp. K]
          Length = 282

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 52/203 (25%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG-KVGLRSTVI 220
           L+A   P         V ++    +L     +  V+VN+    L  +  G    L   + 
Sbjct: 59  LDAFVPPPG------AVAIVPTAWILPAAAEVGTVVVNLSEMRLYYLPPGPGALLSFPIG 112

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V      TP+    + + + +P W    +I ++D                          
Sbjct: 113 VAVEAGATPLGVLTVEQKLVSPTWYPTPAIRRED-------------------------- 146

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P       PG  N + S  +         +H T  P  F    R  +
Sbjct: 147 -------------PELPAAVPPGPENPLGSHALRLSVP-TLLIHGTHRP--FGVGRR-VS 189

Query: 341 SGCVRV--RNIIDLDVWLLKDTP 361
            GC+R+   +I  L   +   TP
Sbjct: 190 HGCIRLYPEDIPLLYRAVRVGTP 212


>gi|226309507|ref|YP_002769469.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus erythropolis PR4]
 gi|226188626|dbj|BAH36730.1| putative N-acetylmuramoyl-L-alanine amidase [Rhodococcus
           erythropolis PR4]
          Length = 396

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 14/79 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG--------------LSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD  ++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTKLGYLHHGTSGIRRESADGAHWVAPDAIFDHQLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAMN 166
           + GL   G+V  +T  ++ 
Sbjct: 64  QRGLLVDGIVGPATYRSLR 82



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 15/124 (12%)

Query: 48  VNDRFDNFLARVDMGIDSDIPII-----SKETIAQTEKAIAFYQDILSRGGWPELPIRPL 102
            +  FD+ L            ++        T     +A   Y+ + +R    +L     
Sbjct: 46  PDAIFDHQLDSAVRAFQQQRGLLVDGIVGPATYRSLREA--SYR-LGARTLIYQLSAPLY 102

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V  L+ +L   G       +   F      ++  FQ   G+   G+    TL
Sbjct: 103 -----GDDVAALQAKLQDLGFYA--GRVDGFFGPQTHESLSSFQREIGIAADGICGPQTL 155

Query: 163 EAMN 166
            ++ 
Sbjct: 156 RSLE 159


>gi|154686655|ref|YP_001421816.1| YqjB [Bacillus amyloliquefaciens FZB42]
 gi|154352506|gb|ABS74585.1| YqjB [Bacillus amyloliquefaciens FZB42]
          Length = 176

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 46/165 (27%), Gaps = 57/165 (34%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  Y++VN    +L  V++ ++     V  G+ D  TP     +     NP     
Sbjct: 21  NPLPGDPYIIVNKATNALAVVKDNRIQGIYQVATGKTDDLTPEGEFTVTVKAVNP----- 75

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                            Y +  N                             +     N 
Sbjct: 76  -----------------YYRKKN----------------------------VEGGAPENP 90

Query: 308 MASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    I F ++        +H T    L      F ++GC+R++N
Sbjct: 91  LGVRWIGFDAKGTDGRIYGIHGTNREELIG---GFVSNGCIRMKN 132


>gi|75907469|ref|YP_321765.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701194|gb|ABA20870.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 508

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 10/152 (6%)

Query: 24  LSLVEKPIHASVLDEIINESY--HSIVNDRFDNFLARVDMGIDSDIPIISKETI-AQTEK 80
           L L  + +  S L + +      +      F +   +  +       I +   + +QT +
Sbjct: 142 LRLGSRGVAVSQLQQNLRRLRYFNGPNTGYFGSETQQAVIRFQRANRIGADGIVGSQTAQ 201

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AI       +  G   +    L  G++  +V RL++RL   G   P+   +  F +    
Sbjct: 202 AIRN-----AATGSLGVKSPVLSEGSTGQAVTRLQQRLRQLGYFSPNPTGN--FRSITRD 254

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           AV  FQ   GL  +G+V+  T  A+     + 
Sbjct: 255 AVMAFQRNAGLPITGVVNQQTWNALGGVAQVP 286



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V+ +++RL   G    +  L   FD Y  ++V  FQ  + L+P+G VDS T
Sbjct: 365 LTVGDRGNNVRAVQQRLTQLGFF--TGSLDGYFDEYTRASVASFQQYYQLNPTGNVDSQT 422

Query: 162 LEAMNVPVDLRIRQ 175
            +A+N+        
Sbjct: 423 WQALNINGSPIAEI 436



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 11/161 (6%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           L +    +      + +      +   +   F         S   I     +A    A  
Sbjct: 211 LGVKSPVLSEGSTGQAVTRLQQRL--RQLGYFSPNPTGNFRS---ITRDAVMAFQRNAGL 265

Query: 84  FYQDILSRGGWPE---LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
               ++++  W     +   P   G S+  V+ L++RL   G  + +   S+        
Sbjct: 266 PITGVVNQQTWNALGGVAQVPNRPGLSTPQVRDLQQRLRDLGYFNGNPTGSI--GVMTRD 323

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR-IRQLQVNL 180
           A+  FQ  + L   G+ D   L+A++   + R   Q   NL
Sbjct: 324 AIVRFQRDYRLTADGIADVQILQAVSRVWEDRYANQPNRNL 364



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           T++A+       + G    +    L LG+  V+V +L++ L        +   +  F + 
Sbjct: 121 TQRALQRACRSATPG---AINSSDLRLGSRGVAVSQLQQNLRRLRYF--NGPNTGYFGSE 175

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + AV  FQ  + +   G+V S T +A+ 
Sbjct: 176 TQQAVIRFQRANRIGADGIVGSQTAQAIR 204



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 20/117 (17%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++   V  ++  L   G    +  ++  F +   S V  FQ  + L   G+V   T 
Sbjct: 65  KVGSTGSEVAEIQRCLKKLGFF--NGPVNGRFASITRSGVIGFQRANRLAADGVVGGGTQ 122

Query: 163 EAMNV------------------PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
            A+                       + + QLQ NL R++       G         
Sbjct: 123 RALQRACRSATPGAINSSDLRLGSRGVAVSQLQQNLRRLRYFNGPNTGYFGSETQQA 179


>gi|332755732|gb|EGJ86094.1| hypothetical protein SF434370_2275 [Shigella flexneri 4343-70]
 gi|333002778|gb|EGK22337.1| hypothetical protein SFVA6_2737 [Shigella flexneri VA-6]
 gi|333002969|gb|EGK22524.1| hypothetical protein SFK218_2917 [Shigella flexneri K-218]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|323140555|ref|ZP_08075482.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
 gi|322415007|gb|EFY05799.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
          Length = 210

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G++   V  +++RL+          +   F    E AVK FQ   GL+  G+V S+
Sbjct: 16  SFQRGDNGQEVVAIQKRLLELSY--SINNIDGDFGPETERAVKNFQADKGLEVDGVVGSA 73

Query: 161 TLEAM--NVPVDLRIRQLQVNLMR 182
           T  A+        R   +  N++R
Sbjct: 74  TYRALMNREMPPNRSNSVVRNVLR 97


>gi|312946611|gb|ADR27438.1| hypothetical protein NRG857_10115 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|324008923|gb|EGB78142.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 57-2]
          Length = 308

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|258513404|ref|YP_003189626.1| spore cortex-lytic enzyme [Desulfotomaculum acetoxidans DSM 771]
 gi|257777109|gb|ACV61003.1| spore cortex-lytic enzyme [Desulfotomaculum acetoxidans DSM 771]
          Length = 242

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G+S   V ++++RL   G       +   F      AV+ FQ  +GL   G+V   T
Sbjct: 41  LHWGSSGYRVTKIQQRLNWWGYY--EGPVDGLFGTKTSKAVRKFQGYNGLSKDGVVGRQT 98

Query: 162 LEAMN 166
           L A+ 
Sbjct: 99  LTALG 103


>gi|222033754|emb|CAP76495.1| Protein erfK/srfK [Escherichia coli LF82]
          Length = 307

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|223985219|ref|ZP_03635303.1| hypothetical protein HOLDEFILI_02609 [Holdemania filiformis DSM
           12042]
 gi|223962797|gb|EEF67225.1| hypothetical protein HOLDEFILI_02609 [Holdemania filiformis DSM
           12042]
          Length = 639

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P   L LG+   +V  ++  L +     G+      +   F A  E+AV+ FQ R G
Sbjct: 523 PAYPGTSLRLGSRGENVSIMQMALNVINQGWGN-SNQLVVDGIFGAATEAAVRAFQTRVG 581

Query: 151 LDPSGMVDSSTLEAM----NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           L   G++  +T  A+    +V  +  +   + N    + L E    L Y + N
Sbjct: 582 LTADGIIGRNTWGAISEQYSVATNNAVALSEQNFELYRFLYENYTSLMYAIDN 634



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHG 150
              P   L  G  S SV  ++ +L  I      + P+  +   F    E+AVK FQ +  
Sbjct: 333 GSFPGLNLQRGVRSDSVAIIQNQLNRIAVNYPNIPPTYPIDGIFGEGTENAVKAFQRQFS 392

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V   T   ++
Sbjct: 393 LTADGIVGKGTWYKIS 408



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R L  G+ +V VQ ++  L          P+  +  +F A   +AV  FQ   GL   
Sbjct: 434 PGRALRQGDRNVYVQEIQFYLQKIALFTSRVPTVKIDSSFGASTRNAVVAFQKLAGLTAD 493

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL--EQKMGLRYVLVNIPAASLEAVENGK 212
           G+V   T + +          +     +I        ++G R   V+I   +L  +  G 
Sbjct: 494 GIVGRQTWDILVRAYRETQSIVPPISQKIPAYPGTSLRLGSRGENVSIMQMALNVINQGW 553

Query: 213 VGLRSTVIVGRVDRQTP----ILHSRI----NRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
                 V+ G     T        +R+    + I+    W         +  ++   +  
Sbjct: 554 GNSNQLVVDGIFGAATEAAVRAFQTRVGLTADGIIGRNTWG-----AISEQYSVATNNAV 608

Query: 265 YLKDNNIHMID 275
            L + N  +  
Sbjct: 609 ALSEQNFELYR 619


>gi|218695599|ref|YP_002403266.1| hypothetical protein EC55989_2224 [Escherichia coli 55989]
 gi|218352331|emb|CAU98097.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia coli 55989]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|194431569|ref|ZP_03063861.1| protein ErfK/srfK [Shigella dysenteriae 1012]
 gi|194420394|gb|EDX36471.1| protein ErfK/srfK [Shigella dysenteriae 1012]
 gi|332091571|gb|EGI96652.1| hypothetical protein SD15574_2277 [Shigella dysenteriae 155-74]
          Length = 307

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|170019668|ref|YP_001724622.1| hypothetical protein EcolC_1638 [Escherichia coli ATCC 8739]
 gi|169754596|gb|ACA77295.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli ATCC 8739]
          Length = 307

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|300900128|ref|ZP_07118321.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 198-1]
 gi|300955303|ref|ZP_07167688.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 175-1]
 gi|307138653|ref|ZP_07498009.1| hypothetical protein EcolH7_11072 [Escherichia coli H736]
 gi|331642606|ref|ZP_08343741.1| protein ErfK/srfK [Escherichia coli H736]
 gi|300317782|gb|EFJ67566.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 175-1]
 gi|300356342|gb|EFJ72212.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 198-1]
 gi|331039404|gb|EGI11624.1| protein ErfK/srfK [Escherichia coli H736]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|125974900|ref|YP_001038810.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|256003843|ref|ZP_05428830.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|281418634|ref|ZP_06249653.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|125715125|gb|ABN53617.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|255992181|gb|EEU02276.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|281407718|gb|EFB37977.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|316939111|gb|ADU73145.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 1313]
          Length = 233

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L     +  V RL++RL      D    ++  +D     AV+ FQ  + L  +G+  
Sbjct: 34  TERLAPNMQNEDVVRLQQRLKNWEYYD--GKITGVYDFKTYLAVRDFQKTYNLPVTGIAG 91

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMR 182
             TL AM +    R  +++    R
Sbjct: 92  EETLAAMGLTTLSRWSEVRAQSSR 115


>gi|326628250|gb|EGE34593.1| Putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 327

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 116 IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 174

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 175 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 200

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 201 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 248


>gi|300818593|ref|ZP_07098801.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 107-1]
 gi|300528765|gb|EFK49827.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 107-1]
 gi|324018779|gb|EGB87998.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 117-3]
          Length = 311

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|316933153|ref|YP_004108135.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600867|gb|ADU43402.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 238

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 46/187 (24%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +A          +L   L R       +     ++V+ P   L  V  G   +R  + VG
Sbjct: 63  QAAPQDDGEAAAELPARLKRQIVTYPSREAPGTIIVDTPNTYLYYVLGGGRAIRYGIGVG 122

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R D  T      + R    P W  P  +I +           YL  +             
Sbjct: 123 R-DGFTWSGVKSVTRKAEWPDWTPPPEMIARQP---------YLPRH------------- 159

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
                               G  N + +  +     +  Y +H T  P          +S
Sbjct: 160 -----------------MAGGPGNPLGARAMYL--GDTIYRIHGTNAPSTIGT---HVSS 197

Query: 342 GCVRVRN 348
           GC+R+ N
Sbjct: 198 GCIRLTN 204


>gi|188493557|ref|ZP_03000827.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 53638]
 gi|193071626|ref|ZP_03052531.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E110019]
 gi|312973798|ref|ZP_07787970.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|331683655|ref|ZP_08384251.1| protein ErfK/srfK [Escherichia coli H299]
 gi|188488756|gb|EDU63859.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli 53638]
 gi|192955057|gb|EDV85555.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli E110019]
 gi|310332393|gb|EFP99628.1| conserved hypothetical protein [Escherichia coli 1827-70]
 gi|315618035|gb|EFU98627.1| conserved hypothetical protein [Escherichia coli 3431]
 gi|323972855|gb|EGB68054.1| ykud domain-containing protein [Escherichia coli TA007]
 gi|331078607|gb|EGI49809.1| protein ErfK/srfK [Escherichia coli H299]
 gi|332343751|gb|AEE57085.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|260855960|ref|YP_003229851.1| hypothetical protein ErfK [Escherichia coli O26:H11 str. 11368]
 gi|257754609|dbj|BAI26111.1| conserved hypothetical protein ErfK [Escherichia coli O26:H11 str.
           11368]
 gi|323155648|gb|EFZ41821.1| hypothetical protein ECEPECA14_2469 [Escherichia coli EPECa14]
          Length = 314

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|168242080|ref|ZP_02667012.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194449450|ref|YP_002046063.1| hypothetical protein SeHA_C2237 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407754|gb|ACF67973.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|205338621|gb|EDZ25385.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|320086448|emb|CBY96219.1| Protein erfK/srfK Flags: Precursor [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 309

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|204929258|ref|ZP_03220401.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204321802|gb|EDZ07001.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 309

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|168238749|ref|ZP_02663807.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737599|ref|YP_002115048.1| hypothetical protein SeSA_A2184 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194713101|gb|ACF92322.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197288428|gb|EDY27809.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 309

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|56413081|ref|YP_150156.1| hypothetical protein SPA0856 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|168229327|ref|ZP_02654385.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168466336|ref|ZP_02700206.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194446202|ref|YP_002041282.1| hypothetical protein SNSL254_A2191 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194469136|ref|ZP_03075120.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197248966|ref|YP_002146972.1| hypothetical protein SeAg_B2137 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197362005|ref|YP_002141642.1| hypothetical protein SSPA0801 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|200387045|ref|ZP_03213657.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|56127338|gb|AAV76844.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194404865|gb|ACF65087.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194455500|gb|EDX44339.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|195631209|gb|EDX49769.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197093482|emb|CAR58942.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197212669|gb|ACH50066.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199604143|gb|EDZ02688.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205335580|gb|EDZ22344.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|322613720|gb|EFY10660.1| hypothetical protein SEEM315_03295 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322620290|gb|EFY17159.1| hypothetical protein SEEM971_18458 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322623336|gb|EFY20177.1| hypothetical protein SEEM973_19208 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322630541|gb|EFY27310.1| hypothetical protein SEEM974_07076 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632782|gb|EFY29527.1| hypothetical protein SEEM201_07248 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638885|gb|EFY35579.1| hypothetical protein SEEM202_11294 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322640349|gb|EFY37007.1| hypothetical protein SEEM954_18691 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647201|gb|EFY43700.1| hypothetical protein SEEM054_01532 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649026|gb|EFY45469.1| hypothetical protein SEEM675_20213 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322661040|gb|EFY57269.1| hypothetical protein SEEM19N_03749 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663019|gb|EFY59226.1| hypothetical protein SEEM801_19632 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668464|gb|EFY64619.1| hypothetical protein SEEM507_16920 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673400|gb|EFY69503.1| hypothetical protein SEEM877_01775 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322679187|gb|EFY75241.1| hypothetical protein SEEM867_07101 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683281|gb|EFY79296.1| hypothetical protein SEEM180_15699 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685849|gb|EFY81839.1| hypothetical protein SEEM600_00035 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195135|gb|EFZ80316.1| hypothetical protein SEEM581_00005 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323198703|gb|EFZ83803.1| hypothetical protein SEEM501_18738 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204202|gb|EFZ89212.1| hypothetical protein SEEM460_08971 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209268|gb|EFZ94204.1| hypothetical protein SEEM020_14561 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210615|gb|EFZ95497.1| hypothetical protein SEEM6152_15935 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216075|gb|EGA00805.1| hypothetical protein SEEM0077_16345 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323223016|gb|EGA07362.1| hypothetical protein SEEM0047_06993 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323223680|gb|EGA07987.1| hypothetical protein SEEM0055_18261 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323231286|gb|EGA15400.1| hypothetical protein SEEM0052_00482 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232622|gb|EGA16719.1| hypothetical protein SEEM3312_18026 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240935|gb|EGA24975.1| hypothetical protein SEEM5258_20464 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323246752|gb|EGA30723.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251118|gb|EGA34992.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323254887|gb|EGA38682.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323260921|gb|EGA44519.1| hypothetical protein SEEM8284_11098 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266272|gb|EGA49761.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271415|gb|EGA54837.1| L,D-transpeptidase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 309

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|159901703|ref|YP_001547949.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894742|gb|ABX07821.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 306

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GN    V+ L+  L I             F     +AVK FQ R GL   G+V  +
Sbjct: 35  TLSKGNRGTDVKALQYLLAI--------DADGVFGDATVTAVKRFQGRKGLTADGIVGPA 86

Query: 161 TLEAMNVPVDL 171
           T +A+   V  
Sbjct: 87  TWDALTETVRP 97



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 20/159 (12%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
              +L +G  +  +    ++     +                     +   + I +    
Sbjct: 9   FIFLLLVGFLVSSQSSAHAIAGAFFHTLSKGN--------RGTDVKALQYLLAIDADGVF 60

Query: 76  A-QTEKAIAFYQD--------ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
              T  A+  +Q         I+    W  L    +  G+S  +V+ ++  L        
Sbjct: 61  GDATVTAVKRFQGRKGLTADGIVGPATWDAL-TETVRPGDSGNAVKAIQTELNAKH--KA 117

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +   F A  E AVK FQ   G+   G+V S+T + +
Sbjct: 118 GLTVDGKFGAGTEQAVKQFQRHVGITADGIVGSTTWKQL 156


>gi|90419954|ref|ZP_01227863.1| ErfK/YbiS/YcfS/YhnG family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335995|gb|EAS49743.1| ErfK/YbiS/YcfS/YhnG family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 291

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 83/288 (28%), Gaps = 59/288 (20%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +A   Y+ +      P+L  R L   ++   V R  +R   SG +   + ++    A   
Sbjct: 25  QAQERYRSLPPVEIAPDLADRWLLQLSTGDGVARSYQRAAASGVVLGGRRVAQPPSAGTR 84

Query: 140 SAVK------LFQMRHGLDPSGM---VDSSTLEAMNVPVDLRIRQLQVNL-----MRIKK 185
             V+        Q R      G+       T  A  V    +      NL     +  + 
Sbjct: 85  VVVQPGYAQPRMQQRVRGQAPGVRPGYLPGTRSAAPVTGQQQAALATRNLPAPNAVDPQF 144

Query: 186 LLEQKM-----GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           L +            ++V+  A  L  V       R  V VG+           I R   
Sbjct: 145 LPQTVPYSGKEAPGTIVVDTRAKFLYHVGRDGTARRYGVGVGKPG-FGWKGRHPITRKAE 203

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P+ +I ++                                     +        
Sbjct: 204 WPGWTPPKEMIARE-----------------------------------RKKGRILPAHM 228

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             G+ N + +  +         +H T +P       R  +SGC+R+RN
Sbjct: 229 KGGEANPLGARALYLG-STLYRIHGTNQPWTIG---RAVSSGCIRMRN 272


>gi|20807586|ref|NP_622757.1| sporulation protein and related proteins [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516125|gb|AAM24361.1| sporulation protein and related proteins [Thermoanaerobacter
           tengcongensis MB4]
          Length = 780

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 45/139 (32%), Gaps = 18/139 (12%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +S G    +  + L  G     V+ L++ L   G    +      F      AV  FQ  
Sbjct: 225 ISNGDGNAIFNKVLKYGMIGEEVKLLQQYLNKLGF--DAGVPDGIFGGKTRQAVINFQKS 282

Query: 149 HGLDPSGMVDSSTLEAMNV----------------PVDLRIRQLQVNLMRIKKLLEQKMG 192
             L+  G+V   T +A+                  P + +  Q+Q      ++L     G
Sbjct: 283 ANLEADGIVGPMTWQALISRLNVTLPSRGDVNRDNPQNQKEDQIQFPTPFTRELKGGLQG 342

Query: 193 LRYVLVNIPAASLEAVENG 211
               L+    + L+  +  
Sbjct: 343 DDVKLLQGMLSELKYYDGD 361



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G           F    ++AV  FQ  +GL   G+V 
Sbjct: 127 SRTLRYGMQGEDVKFLQSILNKLGF--DVGTPDGIFGFKTQNAVVQFQKANGLLADGIVG 184

Query: 159 SSTLEAMNVPVDLR 172
            +T + +   V+  
Sbjct: 185 PATQKVLLQKVNAP 198



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V++L+E L   G    S      F     +A+  FQ    L P G+   ST
Sbjct: 29  LKYGMRSPEVRKLQENLNRLGYFVTSTPTD-YFGPATLNALIKFQKDSNLVPDGIYGPST 87



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 33/251 (13%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           +P    R L  G     V+ L+  L      D    ++  +D    +AV+ FQ  + L+P
Sbjct: 328 FPTPFTRELKGGLQGDDVKLLQGMLSELKYYD--GDVTGTYDDVTSNAVRSFQQYYSLNP 385

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +G+ D  TL+ +   VD +++ ++   ++ K      +G+        A      +    
Sbjct: 386 TGIADVDTLKKLLE-VDAQVKAVKGFYVQGKGGYGHGVGMTQFGAKGMAEQGFKYDEIIK 444

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM------------------ 255
              + V + +VD     +  +I+  + +    I  S     +                  
Sbjct: 445 YYYTGVDINKVDTSNVNVKVKISLDVTSQDIKITSSQPYNVIYKVKDDSTGQIIEKQETF 504

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN-----FIFRQDPGKINAMAS 310
           +        YL   NI + + +  E+    VD     P N     ++ +  P +      
Sbjct: 505 LPDSVTSINYLD-GNILIANSQSPEI-RTSVDMVKIVPTNDGVLFYVNKARPYE----GE 558

Query: 311 TKIEFYSRNNT 321
            +I + + N+ 
Sbjct: 559 FRI-YPNPNSI 568


>gi|90425500|ref|YP_533870.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90107514|gb|ABD89551.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 253

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 50/186 (26%), Gaps = 46/186 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A++         +     R       +     V+V+     L  V      +R  V VGR
Sbjct: 52  AIDDSAADEGATVPEQFKRAVVNYPNREAAGTVIVDTANTYLYYVLGQNRAIRYGVGVGR 111

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               T      I R    P W  P  +I +                              
Sbjct: 112 EG-FTWAGVQTITRKSEWPDWHPPAEMIARQ----------------------------- 141

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSG 342
                     P        G  N + +  +   S  + Y +H T +P        F +SG
Sbjct: 142 ----------PYLPRFMAGGPGNPLGARAMYLGS--SVYRIHGTNDPSTIGK---FVSSG 186

Query: 343 CVRVRN 348
           C+R+ N
Sbjct: 187 CIRLTN 192


>gi|323172571|gb|EFZ58205.1| hypothetical protein ECLT68_2746 [Escherichia coli LT-68]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|210622308|ref|ZP_03293077.1| hypothetical protein CLOHIR_01025 [Clostridium hiranonis DSM 13275]
 gi|210154296|gb|EEA85302.1| hypothetical protein CLOHIR_01025 [Clostridium hiranonis DSM 13275]
          Length = 601

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 41/165 (24%), Gaps = 57/165 (34%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++VN     L   EN K+  +  V  G+    TP   +++   + N              
Sbjct: 36  IIVNTKYNKLSFYENDKLVKKFNVASGKPSTPTPTGKTKVANKIVNR------------- 82

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIE 314
                  P Y     I                               G   N + +  I 
Sbjct: 83  -------PYY--SGGI-----------------------------PGGHPNNPLGNRWIG 104

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
            +      +H   +           + GC+R+ N      WL   
Sbjct: 105 IFGGGTYAIHGNNKESSIGK---HVSGGCIRMHNAE--IRWLFPQ 144


>gi|90418751|ref|ZP_01226662.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90336831|gb|EAS50536.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 172

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 44/161 (27%), Gaps = 46/161 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V      L  V  G   L   + VG+   Q     S +++   +P W    S+ Q+  
Sbjct: 44  IIVKTGERKLYLVTGGGRALVYDIAVGKPSEQ-WFGKSWVSKKREHPTWTPTPSMRQR-- 100

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P       PG  N +    I  
Sbjct: 101 -------------------------------------NPRLPQSIGPGPKNPLGERAINL 123

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV 354
                  +H T  P    +     ++GC R+RN    DL  
Sbjct: 124 GWG-AYRIHGTNSPNSIGS---AASAGCFRMRNADVKDLFE 160


>gi|310818105|ref|YP_003950463.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309391177|gb|ADO68636.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 289

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 86/311 (27%), Gaps = 79/311 (25%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP-----IRPLHLGNSSVSV 111
           + +   + S+ P+      +                G P L         +  G     V
Sbjct: 6   SSLRRPMSSNSPVPPPTAASALRNKRFS--------GQPSLVDVLSGKGTIGPGARGTGV 57

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDPSGMVDSSTLEAMN 166
           + L+E L+  G      G   AF      AV+ FQ+        +  +G VD++TL+A++
Sbjct: 58  RALQEALLAMGF-SLPGGADGAFGKQSAKAVRNFQVHAQSAFPNVKATGGVDAATLQALD 116

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                               L           N+P        +G       V+V + + 
Sbjct: 117 A-------------------LAPAPKQTGQSQNLPVPR----YDGTPV---RVVVVKNEH 150

Query: 227 QTPILHS--RINRIMFNPYWV--IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +T +  +  ++  I  N       P     K +   L +   Y     +      G    
Sbjct: 151 RTFLFDAQGQLQGIFGNAVGANSSPTDKGLKQVSGKLGRAEAYALGQKL----WGGPVYG 206

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              +D +  +                          +   +H T  P          + G
Sbjct: 207 PRLIDLSWADGSR-----------------------SGEELHGTNAPDKLGED---VSHG 240

Query: 343 CVRVRNIIDLD 353
           C+R  N   + 
Sbjct: 241 CIRHGNTDIIA 251


>gi|304407599|ref|ZP_07389251.1| cell wall hydrolase SleB [Paenibacillus curdlanolyticus YK9]
 gi|304343550|gb|EFM09392.1| cell wall hydrolase SleB [Paenibacillus curdlanolyticus YK9]
          Length = 217

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 6/96 (6%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + +G+    V  L++RL + G L         +    + AV+ FQ    +  +G+V  +
Sbjct: 33  TMSVGSKGPQVVDLQQRLRMLGYLSSEA--DGNYGEGTKDAVQRFQKGAAIAQTGVVGQT 90

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           T+ A+      R     +     + +  +  G +Y 
Sbjct: 91  TMHALKKVTVSRTDLSML----ARIVYSEARGEQYD 122


>gi|268319577|ref|YP_003293233.1| carboxy-terminal processing protease [Lactobacillus johnsonii
           FI9785]
 gi|262397952|emb|CAX66966.1| carboxy-terminal processing protease [Lactobacillus johnsonii
           FI9785]
          Length = 483

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +         FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMPKYVT--GVFDDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 452 QAQLYLAVAQKLQDDNSALKKAMSLNLKDMED 483


>gi|322653933|gb|EFY50257.1| hypothetical protein SEEM965_19663 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|323245646|gb|EGA29641.1| hypothetical protein SEEM1156_11922 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
          Length = 246

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 35  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 93

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 94  E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 119

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 120 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 167


>gi|297194627|ref|ZP_06912025.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|297152365|gb|EFH31700.1| predicted protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 200

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--G 155
               L  G+S  +V  L++RL+    L P       FD  VE AVK++Q   G+     G
Sbjct: 125 AGGTLRRGDSGAAVVDLQQRLMQL-WLYPYDEADGRFDEDVEQAVKVYQWDRGIQGDPLG 183

Query: 156 MVDSSTLEAMNV 167
           +    T  A+  
Sbjct: 184 VYGPHTRRALEA 195


>gi|157161473|ref|YP_001458791.1| hypothetical protein EcHS_A2113 [Escherichia coli HS]
 gi|157067153|gb|ABV06408.1| ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli HS]
          Length = 310

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|51894094|ref|YP_076785.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
 gi|51857783|dbj|BAD41941.1| spore cortex-lytic enzyme precursor [Symbiobacterium thermophilum
           IAM 14863]
          Length = 237

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V   + RL   G       +   +      AV LFQ R+GL   G+V   
Sbjct: 42  TLRWGSRGSDVCLAQRRLKAWGYY--RGEVDCIYGRLTYEAVTLFQRRNGLTVDGIVGPD 99

Query: 161 TLEAMN 166
           T  A+ 
Sbjct: 100 TWAALG 105


>gi|218666907|ref|YP_002426952.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|218519120|gb|ACK79706.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 348

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 55/169 (32%), Gaps = 41/169 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  +     N +V     V V     +  +  +RI      P W +P++I    
Sbjct: 84  IIVDIPARRIYYFPVNDRVVYTYPVGVFLPGWKEALTDTRIIAKFKMPAWNVPKNIHA-- 141

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 142 ----------------------WFEKKFHMDIPWYW----------PPGPENPMGELAME 169

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                  ++H T  P      +R  + GC ++   N+  L   +   TP
Sbjct: 170 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQMFPENVAQLFPMVPVGTP 214


>gi|239631525|ref|ZP_04674556.1| periplasmic protease [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525990|gb|EEQ64991.1| periplasmic protease [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 480

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSAQLTK 466


>gi|110346929|ref|YP_665747.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110283040|gb|ABG61100.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 184

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 65/186 (34%), Gaps = 44/186 (23%)

Query: 183 IKKLLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            ++L++   G R   V+V+  +  L  V  G   +R  V +GR    T      I     
Sbjct: 25  YRQLVDDPTGERPGTVVVDTRSYFLYLVRPGGKAMRYGVGLGRQG-FTWSGDGVIQWKQR 83

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P  +I +                              E   W++         Q
Sbjct: 84  WPKWTPPAEMIARQ----------------------------PELEKWSADNGG-----Q 110

Query: 301 DPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            PG  N + +  +  F +  +  Y +H TPE           +SGCVR+  ++IIDL   
Sbjct: 111 PPGLNNPLGARALYIFQNGEDTLYRLHGTPEYWTIGK---AVSSGCVRLMNQDIIDLYDR 167

Query: 356 LLKDTP 361
           +   TP
Sbjct: 168 VATPTP 173


>gi|56963694|ref|YP_175425.1| peptidoglycan binding domain-containing protein [Bacillus clausii
           KSM-K16]
 gi|56909937|dbj|BAD64464.1| peptidoglycan-binding domain-containing protein [Bacillus clausii
           KSM-K16]
          Length = 355

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 20/180 (11%)

Query: 13  CFFVYLILPMGLSLVE--------KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID 64
           CFF   +L   L  V          PIH     E + +    +V   +     R      
Sbjct: 34  CFFFMSVLLFSLISVPEQADADTFSPIHEGEKSERVEKLQDYLVESGYLEDQDRSHTYDS 93

Query: 65  SDIPIISK--ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
             +  + +  +        IA  Q +          +  L  G+  + V  L+++L    
Sbjct: 94  KVVAAVKQFQQDNNLLVDGIAGVQTLG--------SMAVLQEGSDGLLVNMLQKKLAQLQ 145

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
                  +   +    ++AV  FQ ++GL   G+    T +A+         Q +    +
Sbjct: 146 YY--QADIDGYYGVLTKAAVTAFQKQNGLAVDGIAGPLTFKALYYSEAEPAEQREKKSEK 203


>gi|292670826|ref|ZP_06604252.1| endopeptidase [Selenomonas noxia ATCC 43541]
 gi|292647447|gb|EFF65419.1| endopeptidase [Selenomonas noxia ATCC 43541]
          Length = 246

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +      +G+    V  ++ +L   G           F      AVK FQ  +GL   GM
Sbjct: 47  VSAESFQIGDQGTDVAEIQGQLSSFGY---DVVADGDFGPATAEAVKEFQAANGLAVDGM 103

Query: 157 VDSSTLEAM 165
           V   T +A+
Sbjct: 104 VGPVTYQAL 112


>gi|300934360|ref|ZP_07149616.1| putative hydrolase [Corynebacterium resistens DSM 45100]
          Length = 394

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 27/158 (17%)

Query: 31  IHASVLDEIINESYHSIVN----DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
           +        + E   ++      + F+     +     S    +    +A+  KA    +
Sbjct: 6   LQVGDSSPRVAEVRGTLARLGLLEGFEGDATGLSKQRWSAKDQVFDADLAEALKAFQQQR 65

Query: 87  DILSRGGWPELPIRPLH--------LGNS----------SVSVQRLRERLIISGDLDPSK 128
            I++ G    +    L         LG               V +L+ +L   G    + 
Sbjct: 66  GIIADG---MITSGTLRALREASYTLGARVLSLQSNQFVGDDVAQLQTQLHDLGFY--TN 120

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F     +AV  +Q+ +GL+  G+V  +TL A++
Sbjct: 121 RIDGHFGHKTHAAVVSYQLNYGLNNDGVVGPNTLRALS 158



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 74/227 (32%), Gaps = 51/227 (22%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQMRH 149
           L +G+SS  V  +R  L   G L+                    FDA +  A+K FQ + 
Sbjct: 6   LQVGDSSPRVAEVRGTLARLGLLEGFEGDATGLSKQRWSAKDQVFDADLAEALKAFQQQR 65

Query: 150 GLDPSGMVDSSTLEAMNVP----------------VDLRIRQLQVNLMRIKKLLEQKMGL 193
           G+   GM+ S TL A+                   V   + QLQ  L  +     +  G 
Sbjct: 66  GIIADGMITSGTLRALREASYTLGARVLSLQSNQFVGDDVAQLQTQLHDLGFYTNRIDGH 125

Query: 194 RYVLVNIP--AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
                +    +  L    N        V+     R    L  RI           P+SI 
Sbjct: 126 FGHKTHAAVVSYQLNYGLNND-----GVVGPNTLRALSYLGRRIT-------GGSPQSIR 173

Query: 252 QKDMM---------ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +K+ +           +  DP    D+  + +     EV  EE+ W+
Sbjct: 174 EKEQIRSAGPQLSGKRVVIDPGLGGDHKGYAVLGPYGEVTEEEILWD 220


>gi|167036506|ref|YP_001664084.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167038593|ref|YP_001666171.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320114935|ref|YP_004185094.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|320116981|ref|YP_004187140.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855340|gb|ABY93748.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|166857427|gb|ABY95835.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928026|gb|ADV78711.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|319930072|gb|ADV80757.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 1089

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 78/213 (36%), Gaps = 23/213 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++   V+ L+E L I G    S      F +  E+AV+ FQ ++GL   G+V   T
Sbjct: 319 LKLGSTGNGVKILQETLNIIGY---SLVEDGQFGSGTEAAVRDFQSKNGLTVDGIVGPQT 375

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            + +      R     V        +          + IPA       +G     + V +
Sbjct: 376 WQKLG-SKLTRTYIRPVYQWNYAWGINISKAYAGAGIGIPA---SFSVDGSNAYFTDV-L 430

Query: 222 GRVDRQTPILHSRINRIM----FNPYWVIPRSIIQKDMMALLRQDPQYLKD----NNIHM 273
           G + +   I  S +N  +     N   ++  S    D        P Y  D    +   +
Sbjct: 431 GGIYKINNIFSSTLNLTVNGNLRNTNNLVNHSPAVDD---RYLYIPYYYSDSSKQHGKIV 487

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           + +K     ++++D++S    +    Q P   N
Sbjct: 488 VLDKNNLNVIKQIDFSSSSLKS----QLPNSPN 516


>gi|325924927|ref|ZP_08186357.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325544664|gb|EGD16017.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 301

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 44/141 (31%), Gaps = 17/141 (12%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            I ++  +  +N    S                    I     + +AQT++     +D  
Sbjct: 162 SITSAETENALNAMRQSYRQAI---ESGVAPEQAWKQINSQPPQQLAQTQQ---HKRDAA 215

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQ 146
             G         L  G     V++L+ +L   G +            F    + AV+ FQ
Sbjct: 216 KDG--------KLEQGERGEQVKQLQGQLAQLGAVGRDGKPLHADGDFGGNTKHAVEQFQ 267

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
             HGL   G+    T  A+  
Sbjct: 268 REHGLQIDGIAGQQTQAALAK 288


>gi|294664477|ref|ZP_06729827.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605757|gb|EFF49058.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 565

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V+ L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 429 APSVLRDNARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSDAVKAFQRAHGLQDD 488

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T  A+       +   + N
Sbjct: 489 GVVGRDTQAALKQAEKTPLLSEKTN 513


>gi|167553194|ref|ZP_02346944.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205322325|gb|EDZ10164.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
          Length = 309

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|16765345|ref|NP_460960.1| hypothetical protein STM2015 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161613379|ref|YP_001587344.1| hypothetical protein SPAB_01090 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168259690|ref|ZP_02681663.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|197263159|ref|ZP_03163233.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198244687|ref|YP_002216100.1| hypothetical protein SeD_A2350 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|205353164|ref|YP_002226965.1| hypothetical protein SG2039 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207857450|ref|YP_002244101.1| hypothetical protein SEN2013 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|731416|sp|P40680|ERFK_SALTY RecName: Full=Probable L,D-transpeptidase ErfK/SrfK; Flags:
           Precursor
 gi|535768|gb|AAA69298.1| unknown ORF [Salmonella enterica subsp. enterica serovar
           Typhimurium]
 gi|16420544|gb|AAL20919.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161362743|gb|ABX66511.1| hypothetical protein SPAB_01090 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197241414|gb|EDY24034.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197939203|gb|ACH76536.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205272945|emb|CAR37886.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205350634|gb|EDZ37265.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|206709253|emb|CAR33593.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261247230|emb|CBG25054.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|301158576|emb|CBW18087.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913006|dbj|BAJ36980.1| hypothetical protein STMDT12_C20370 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321224660|gb|EFX49723.1| L,D-transpeptidase ErfK [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323130338|gb|ADX17768.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326623846|gb|EGE30191.1| protein ErfK/srfK [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 309

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|315300640|gb|EFU59868.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 16-3]
          Length = 311

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R   
Sbjct: 184 YIGKLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQF 231


>gi|254413016|ref|ZP_05026788.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180180|gb|EDX75172.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 417

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 2/75 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL +G+   +VQ L+ RL   G           +      AV  FQ    L+  G+V  +
Sbjct: 37  PLQVGSRGETVQALQTRLKKLGYY--EGDTDGVYGDTTRLAVIEFQESIDLNADGVVGLT 94

Query: 161 TLEAMNVPVDLRIRQ 175
           T   +          
Sbjct: 95  TWTKLQAAAAEVPEP 109


>gi|294625068|ref|ZP_06703716.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600653|gb|EFF44742.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 630

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 28/85 (32%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V+ L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 429 APSVLRDNARGAEVRTLQQTLQQLGYKDAGGNELKADGAYGQRTSDAVKAFQRAHGLQDD 488

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   T  A+       +   + N
Sbjct: 489 GVVGRDTQAALKQAEKTPLLSEKTN 513


>gi|148239359|ref|YP_001224746.1| hypothetical protein SynWH7803_1023 [Synechococcus sp. WH 7803]
 gi|147847898|emb|CAK23449.1| Uncharacterized conserved membrane protein [Synechococcus sp. WH
           7803]
          Length = 218

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 80/223 (35%), Gaps = 36/223 (16%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           ++  Q   G   + +  +ST      +P          ++ R+   L Q++GL+ ++++ 
Sbjct: 24  LRAVQAADG-PKTDVSGASTEREPDPIPPLAAPVSDADSMARVPADLLQRVGLQ-LVLDR 81

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
               +  + +G +  R    VG V  +TP    R+ +++  P W  P S   + +     
Sbjct: 82  QHRQVLVLHDGLLTRRFPAAVGTVGWETPSGRFRVMQMVKEPVWTHPVS--GELLGPEEA 139

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
            +P   +    H  D KG+E       W+  +  +       G                 
Sbjct: 140 TNPLGSRWIGFH-RDCKGRE------GWDGEQYLDIDGCTVAG----------------- 175

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
              H TP         R  + GCVR+   N+ ++   +   TP
Sbjct: 176 --FHGTPYRWTVG---RAVSHGCVRLYEENVQEIFEMVRVGTP 213


>gi|87302650|ref|ZP_01085467.1| hypothetical protein WH5701_12089 [Synechococcus sp. WH 5701]
 gi|87282994|gb|EAQ74951.1| hypothetical protein WH5701_12089 [Synechococcus sp. WH 5701]
          Length = 220

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 44/158 (27%), Gaps = 51/158 (32%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +    +GKV     V +G     TP+    +   + NP +V  +S  +K ++      
Sbjct: 98  REIRLERDGKVYGPWPVAIGDPATPTPLGTFNVINKVINPQYVSTKSGQKKGVI------ 151

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNN 320
                                                   G    +    I F     N 
Sbjct: 152 ----------------------------------------GPNGPLGDRWIGFNTKGPNQ 171

Query: 321 TYMHDTPEPILFNNVVR-FETSGCVRV--RNIIDLDVW 355
             +H TP    +    R   T+GCVR+   ++  L   
Sbjct: 172 FGIHGTPSAWSWTVSSRSAVTNGCVRMFHEHVRKLFEM 209


>gi|320176226|gb|EFW51288.1| L,D-transpeptidase ErfK [Shigella dysenteriae CDC 74-1112]
          Length = 311

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVKRKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 231


>gi|187779972|ref|ZP_02996445.1| hypothetical protein CLOSPO_03568 [Clostridium sporogenes ATCC
           15579]
 gi|187773597|gb|EDU37399.1| hypothetical protein CLOSPO_03568 [Clostridium sporogenes ATCC
           15579]
          Length = 423

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++++  L   G       +   F +  E AVK FQ+ + L   G++  
Sbjct: 2   RVLKKGDRGSDVKKIQAVLQKIGY--DVGPIDGIFGSKTEEAVKRFQLNNRLAVDGIIGP 59

Query: 160 STLEAMNV 167
            T E +N 
Sbjct: 60  KTYEVLNK 67


>gi|291447220|ref|ZP_06586610.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
 gi|291350167|gb|EFE77071.1| lipoprotein [Streptomyces roseosporus NRRL 15998]
          Length = 295

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 4/140 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G+ S  V+ L+ RL   G    +      + +    AV+ FQ +  L  +G  
Sbjct: 86  PRVLMRTGSESDRVRELQARLRQIGHFGRTPT--GYYGSVTADAVRSFQAKRSLPVTGST 143

Query: 158 DSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGL 215
           D  T + +  +       +L+    R     +++ +  R + ++  + +L  + +GKV  
Sbjct: 144 DEVTWQRLRAMTRVPTAAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVS 203

Query: 216 RSTVIVGRVDRQTPILHSRI 235
              V  G     T      +
Sbjct: 204 AMDVRFGSDYTPTREGVFEV 223


>gi|254500037|ref|ZP_05112190.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
 gi|222441504|gb|EEE48181.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
          Length = 178

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 68/198 (34%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + ++++     R +        +  ++V+     L  V+  K  +R  V +GR   + 
Sbjct: 13  PAINLKKVPERFYRQQVDYNTPEKVGTLVVDTQNFYLYLVQENKKAMRYGVGLGRAGFE- 71

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +RI R    P W  P  +I+++                             E   W
Sbjct: 72  WSGRARIARKTEWPKWTPPEEMIERE----------------------------PELEKW 103

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +            PG  N + +  +     +R+  Y +H T E           +SGCVR
Sbjct: 104 SWRNGGM-----PPGLENPLGARALYIFQGNRDTLYRLHGTSEYWTIGT---AVSSGCVR 155

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +   +P
Sbjct: 156 LMNQDIIDLFGRVPVGSP 173


>gi|302207202|gb|ADL11544.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis C231]
          Length = 398

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 18/115 (15%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQ 112
               E +A+  K +   + I++ G   E+ +R L      LG                V 
Sbjct: 52  TYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVV 111

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +L+ +L   G    +  +   F      A+  +Q+ +GL   G+    T+ A   
Sbjct: 112 QLQTQLQELGFY--TDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGR 164



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 65/243 (26%), Gaps = 38/243 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPS------------KGLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G +  S                  FD  +   +K  Q   
Sbjct: 10  LRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQAR 69

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           G+  SG ++  TL A+      ++    ++       +   +      +       + V+
Sbjct: 70  GIIASGEINEVTLRALRE-ASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVD 128

Query: 210 NG------KVGLRSTVIVG------RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
                   K  L   V  G                    RI       +      +D   
Sbjct: 129 GRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGP 188

Query: 258 LLRQ-----DPQYLKDNNIHMIDEKGKEVFVEEVDWN--------SPEPPNFIFRQDPGK 304
           +L       DP    ++   ++     E+  EE+ W+                    P +
Sbjct: 189 MLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQ 248

Query: 305 INA 307
            N 
Sbjct: 249 DNP 251


>gi|282555173|gb|ADA82687.1| L,D-transpeptidase [Candidatus Blochmannia castaneus]
          Length = 316

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 56/186 (30%), Gaps = 45/186 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           V++N     L    +N  + +   + +G V   TP    + I     NP+W IP   ++ 
Sbjct: 101 VVINTAEMRLYYYPKNNNIVIVLPIAIGTVKNATPSHWITSIKHKKKNPFW-IPTKSMRD 159

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +                                              G  N M    +
Sbjct: 160 EYLKQ----------------------------------GKFLPTIFPAGPNNPMGLYAL 185

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVV 372
                     H T     F   +R  T GC+R+R   D+  +L    P  +R   I E +
Sbjct: 186 YLEKSYAI--HGTN--CNFGIGLR-ITRGCIRLR-PQDI-EYLFHIVPVGTRVQFINEPI 238

Query: 373 KTRKTT 378
           KT   T
Sbjct: 239 KTTVET 244


>gi|118443295|ref|YP_878172.1| glycosy hydrolase family protein [Clostridium novyi NT]
 gi|118133751|gb|ABK60795.1| glycosyl hydrolase, family 25 [Clostridium novyi NT]
          Length = 323

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++RLI  G           F    E AVK FQ  + L   G+V   T 
Sbjct: 258 RRGARGNITKIIQQRLIDKGYYVGIYKADGVFRNDTELAVKKFQKNNNLKVDGIVGIETW 317

Query: 163 EAM 165
           +A+
Sbjct: 318 KAL 320


>gi|303238362|ref|ZP_07324897.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
 gi|302594066|gb|EFL63779.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
          Length = 362

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G S   V +L+  L   G L  S      + +  ++AVK  Q ++GLD  G+   
Sbjct: 114 GALKEGMSGSRVTQLQSDLKKLGYLSASPT--GYYGSLTKAAVKKLQKKNGLDQDGVAGD 171

Query: 160 STLEAMNV 167
           +TL  +N 
Sbjct: 172 ATLTKINK 179



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G S   V  L++ L   G L  S      + +  +SAV+  Q  +GLD  G+ 
Sbjct: 30  ASKVLKEGMSGSDVTSLQKDLRTLGYLKVSPT--GYYGSLTKSAVERLQDSNGLDGDGIA 87

Query: 158 DSSTLEAMNV 167
            S T+  ++ 
Sbjct: 88  GSKTISLISK 97


>gi|323977829|gb|EGB72915.1| ykud domain-containing protein [Escherichia coli TW10509]
          Length = 310

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 44/179 (24%)

Query: 192 GLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRS 249
             + +++N+    L     +        + +G+  R+TP    + + R    P W    +
Sbjct: 94  ARKGIVINVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVKRKQEAPTWTPTPN 153

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
             ++                                    +    +       G  N M 
Sbjct: 154 TRRE-----------------------------------YAKRGESLPAFVPAGPDNPMG 178

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
              I          H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 179 LYAIYIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 230


>gi|86743213|ref|YP_483613.1| cell wall hydrolase/autolysin [Frankia sp. CcI3]
 gi|86570075|gb|ABD13884.1| cell wall hydrolase/autolysin [Frankia sp. CcI3]
          Length = 438

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 39/140 (27%), Gaps = 23/140 (16%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPL- 102
               V+       A      D          +    +A    + + + G       R L 
Sbjct: 79  RVPAVDGTLGGVPAEPAEPADRF-----DRDLDNALRAFQQSRGLSADGILGPDTARALE 133

Query: 103 ----HLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
                LG+               V  L+ERL   G           F    ESAV+ FQ 
Sbjct: 134 EARHKLGDRLLYHSPAYPFVGDDVAALQERLFNMGF--DVGRTDGIFGPRTESAVRDFQR 191

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
             GLDP G     TL  +  
Sbjct: 192 NRGLDPDGQCGPHTLRELKR 211


>gi|323968137|gb|EGB63546.1| ykud domain-containing protein [Escherichia coli M863]
          Length = 243

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 44/173 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  IVINVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R 
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRE 229


>gi|300859519|ref|YP_003784502.1| putative hydrolase [Corynebacterium pseudotuberculosis FRC41]
 gi|300686973|gb|ADK29895.1| putative hydrolase [Corynebacterium pseudotuberculosis FRC41]
 gi|302331763|gb|ADL21957.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277455|gb|ADO27354.1| N-Acetymuramyl-L-Alanine Amidase [Corynebacterium
           pseudotuberculosis I19]
          Length = 393

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 18/115 (15%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQ 112
               E +A+  K +   + I++ G   E+ +R L      LG                V 
Sbjct: 47  TYFDEDLAEVIKGMQQARGIIASGEINEVTLRALREASYKLGARVLSFEPNNIFVGDDVV 106

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +L+ +L   G    +  +   F      A+  +Q+ +GL   G+    T+ A   
Sbjct: 107 QLQTQLQELGFY--TDRVDGRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGR 159



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 65/243 (26%), Gaps = 38/243 (15%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPS------------KGLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G +  S                  FD  +   +K  Q   
Sbjct: 5   LRVGDHSPRVAEVRTALTRLGLVPDSDKEIKQSKGQTFTDPETYFDEDLAEVIKGMQQAR 64

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           G+  SG ++  TL A+      ++    ++       +   +      +       + V+
Sbjct: 65  GIIASGEINEVTLRALRE-ASYKLGARVLSFEPNNIFVGDDVVQLQTQLQELGFYTDRVD 123

Query: 210 NG------KVGLRSTVIVG------RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
                   K  L   V  G                    RI       +      +D   
Sbjct: 124 GRFGENTYKALLSYQVNYGLKSDGVCGPETIRAFGRLGRRITGGSPQALRERERVRDAGP 183

Query: 258 LLRQ-----DPQYLKDNNIHMIDEKGKEVFVEEVDWN--------SPEPPNFIFRQDPGK 304
           +L       DP    ++   ++     E+  EE+ W+                    P +
Sbjct: 184 MLAGKRVVIDPSLGGNSRGQVVQGPYGEITEEEILWDLATRVEGRMIAAGMETIISRPRQ 243

Query: 305 INA 307
            N 
Sbjct: 244 DNP 246


>gi|325291385|ref|YP_004267566.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
 gi|324966786|gb|ADY57565.1| spore cortex-lytic enzyme [Syntrophobotulus glycolicus DSM 8271]
          Length = 234

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    L  G+S   V+ L+++L   G       +   F +  E A+K FQ   G+   G
Sbjct: 33  ALGDTVLKEGSSGQEVKSLQKKLSQLGY--SVGAIDGKFGSATEQALKRFQKNRGIKTDG 90

Query: 156 MVDSSTLEAMNV 167
           +    T + +N 
Sbjct: 91  IFGDETAKELNR 102


>gi|150389177|ref|YP_001319226.1| spore cortex-lytic enzyme SleB [Alkaliphilus metalliredigens QYMF]
 gi|149949039|gb|ABR47567.1| Spore cortex-lytic enzyme SleB [Alkaliphilus metalliredigens QYMF]
          Length = 227

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +  + L  G+S   V  L+ERL      D    +S  +      AV+LFQ  +GL   G
Sbjct: 25  SIYAQNLSWGSSGGEVTDLQERLTRWDYYD--GPISGTYGPQTHEAVRLFQRINGLTVDG 82

Query: 156 MVDSSTLEAMNV 167
           +V   T  A+ +
Sbjct: 83  IVGPQTRGALGM 94


>gi|327253132|gb|EGE64786.1| hypothetical protein ECSTEC7V_2385 [Escherichia coli STEC_7v]
          Length = 242

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 44/173 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVINVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R 
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRE 228


>gi|328544425|ref|YP_004304534.1| ErfK/YbiS/YcfS/YnhG family [polymorphum gilvum SL003B-26A1]
 gi|326414167|gb|ADZ71230.1| ErfK/YbiS/YcfS/YnhG family [Polymorphum gilvum SL003B-26A1]
          Length = 199

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 45/167 (26%), Gaps = 40/167 (23%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R             ++++     L  V  G   ++  V VG+   Q      R+ R    
Sbjct: 53  REMVSYNGPHAPGTIIIDTGERRLYHVRPGGKAMKYGVGVGKEGFQ-WAGTHRVTRKAEW 111

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  +  ++                                     +        +
Sbjct: 112 PGWTPPPQMRARE-----------------------------------RAKGRILPAHME 136

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H T +P    +     +SGC+R+ N
Sbjct: 137 GGPNNPLGARALYIG-STLYRIHGTNQPWTIGS---AVSSGCIRLAN 179


>gi|291541685|emb|CBL14795.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus bromii L2-63]
          Length = 530

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD--SSTL 162
           G+S   V+++++RL   G  D    +   F    E A K FQ   GL   G+     +TL
Sbjct: 234 GSSGAEVKKIQQRLADLGYYD--GAVDGYFGDATEEAYKAFQKAAGLTVDGIAGDSRNTL 291

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            + N P   +         + ++            V          EN +V
Sbjct: 292 YSENAPEAPKADTTTKTEDKPEEETTAPTEATTEPVTEAVQYQNGDENDEV 342



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  V  ++++LI  G           +  Y   AV  FQ ++ LD +G+VD  T  A
Sbjct: 336 GDENDEVTAIQQQLIKLGYFAMDAT--GYYGEYTAQAVANFQNQNSLDSTGIVDEKTYNA 393

Query: 165 M 165
           +
Sbjct: 394 L 394


>gi|301327785|ref|ZP_07220983.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 78-1]
 gi|300845678|gb|EFK73438.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 78-1]
          Length = 277

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 65  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 124

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 125 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 149

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 150 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 197


>gi|300920211|ref|ZP_07136657.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 115-1]
 gi|300412713|gb|EFJ96023.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 115-1]
          Length = 277

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 65  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 124

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 125 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 149

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 150 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 197


>gi|13488406|ref|NP_109413.1| hypothetical protein mll9547 [Mesorhizobium loti MAFF303099]
 gi|14028160|dbj|BAB54752.1| mll9547 [Mesorhizobium loti MAFF303099]
          Length = 176

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 51/179 (28%), Gaps = 46/179 (25%)

Query: 196 VLVNIPAASLEAVENGKVGL-RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           + V+  A  +  ++     L      +G  ++  P   + + R++ NP +        K 
Sbjct: 35  IEVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPSGEAEVKRVVRNPTYHYDPRFAFKG 94

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
           + A                                        F    G  N +    I+
Sbjct: 95  VKAKR-------------------------------------PFTIAAGPNNPV--VWID 115

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEV 371
                +  +H TPEP          + GC+R+ N    DL   + K T    +  +   
Sbjct: 116 LSIE-SYGIHGTPEPGKIGTT---FSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANA 170


>gi|85373877|ref|YP_457939.1| hypothetical protein ELI_05250 [Erythrobacter litoralis HTCC2594]
 gi|84786960|gb|ABC63142.1| hypothetical protein ELI_05250 [Erythrobacter litoralis HTCC2594]
          Length = 425

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            PG    +    I+    +   +H TPEP       R ++SGCVR+ N  
Sbjct: 362 PPGPNGMVGVVWIDLSKEH-YGIHGTPEPETIG---RAQSSGCVRLTNWD 407


>gi|186682714|ref|YP_001865910.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
 gi|186465166|gb|ACC80967.1| ErfK/YbiS/YcfS/YnhG family protein [Nostoc punctiforme PCC 73102]
          Length = 182

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 49/166 (29%), Gaps = 52/166 (31%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + V   A  +   ++ +V     + +G+   +TP+ + ++  +  NP             
Sbjct: 58  IRVKRGARQVYVYQDKQVLKSFPIAIGKSGWETPLGNYQVIYMKKNPI------------ 105

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +         PG  N +    I F
Sbjct: 106 -----------------------------------FKNFKTGNIIMPGANNPLGKRVIVF 130

Query: 316 --YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             Y +++   H T +  L        + GC+R+ N   + ++ L +
Sbjct: 131 KIYKKSHLAFHGTNQDKLIGK---AVSHGCIRMLNKDVIALYELVN 173


>gi|205373687|ref|ZP_03226490.1| hypothetical protein Bcoam_10670 [Bacillus coahuilensis m4-4]
          Length = 355

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++L+E LI  G      G    + +  + AV  FQ  +GL   G+    T
Sbjct: 202 LLFGDKGADVKKLQESLIRLGYPLTKFGADGDYGSETKQAVMNFQKANGLPVDGIAGIQT 261

Query: 162 LEAMNVPVDLRIRQLQ 177
           ++ +N  +D +   ++
Sbjct: 262 MKKVNELLDAKKVTIE 277



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 53/153 (34%), Gaps = 25/153 (16%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY- 85
            E P++     +++ E  + ++   +   L   D            ETI Q  K    Y 
Sbjct: 37  GELPLNNGDRGDLVREVQNDLIKLGYSLPLYGADGF-------YGAETIQQVRKFQKDYY 89

Query: 86  ---QDILSRGGW--------------PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
                I+    +              P    + L +G+   +V  L++ L   G   P  
Sbjct: 90  LTVDGIVGENTFKALKERSTTKSTVPPSTSNQNLSIGSVGSNVMMLQQNLQKLGYSLPKY 149

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G    F    E AVK  Q  +GL   G+V S+T
Sbjct: 150 GSDGTFGQETEDAVKQLQRDNGLIIDGIVGSNT 182



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL+ G+    V+ ++  LI  G   P  G    + A     V+ FQ  + L   G+V  +
Sbjct: 40  PLNNGDRGDLVREVQNDLIKLGYSLPLYGADGFYGAETIQQVRKFQKDYYLTVDGIVGEN 99

Query: 161 TLEAMN 166
           T +A+ 
Sbjct: 100 TFKALK 105



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 14/143 (9%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI------PIISKETIAQTEK--AIAF 84
              L E +    + +     D            +       P+     I   +K   +  
Sbjct: 211 VKKLQESLIRLGYPLTKFGADGDYGSETKQAVMNFQKANGLPVDGIAGIQTMKKVNELLD 270

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVK 143
            + +     +P LP   L  G+   +V+++++ L    DL  +   +   +    E AV+
Sbjct: 271 AKKVTIEAPYP-LPNVILKQGSEGNNVKQVQQALK---DLKLNVGTVDGIYGPKTEKAVR 326

Query: 144 LFQMRH-GLDPSGMVDSSTLEAM 165
            FQ  +  L   G+   +T + M
Sbjct: 327 DFQSNYPTLKNDGIYGPNTRKYM 349


>gi|254501238|ref|ZP_05113389.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222437309|gb|EEE43988.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 197

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 40/167 (23%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +       ++++     L  V      ++  V VG+   Q      R+ R    
Sbjct: 51  RKRVRYDGPYSPGTIVIDTSERRLYHVLGNGRAMKYGVGVGKDGFQ-WAGTHRVTRKAEW 109

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  +  ++                                     +         
Sbjct: 110 PSWTPPAQMRARE-----------------------------------RAKGRILPAHMK 134

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N M +  +   +     +H T EP    +     +SGC+R+ N
Sbjct: 135 GGPNNPMGARALYIGNT-LYRIHGTTEPWTIGS---AVSSGCIRMAN 177


>gi|209524911|ref|ZP_03273456.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494560|gb|EDZ94870.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 225

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+S   V  L+ +L   G           F      AVK FQ  +GL   G+   
Sbjct: 160 KSLSHGDSCSRVTNLQHKLAYYGYFHARAT--GYFGPITTKAVKAFQRDYGLRVDGVAGP 217

Query: 160 STLEAMNV 167
           +TL A+ +
Sbjct: 218 ATLAALGM 225



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V +L+  L   G        +  F +  + +VK FQ  +GL   G+V  +T  A
Sbjct: 67  GSSGNHVVQLQNALANHGYF--RARSTGYFGSITKHSVKAFQRDYGLVADGIVGPATASA 124

Query: 165 MN 166
           + 
Sbjct: 125 LG 126


>gi|118590295|ref|ZP_01547698.1| hypothetical protein SIAM614_12293 [Stappia aggregata IAM 12614]
 gi|118437267|gb|EAV43905.1| hypothetical protein SIAM614_12293 [Stappia aggregata IAM 12614]
          Length = 197

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 50/167 (29%), Gaps = 40/167 (23%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +       ++++     L  V  G   ++  V VG+   Q      RI R    
Sbjct: 51  RKRVKYDGPYPAGTIIIDTSERRLYHVLPGGKAMKYGVGVGKEGFQ-WAGTHRITRKAEW 109

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P S ++    A  R  P Y+                                   
Sbjct: 110 PSWT-PPSQMRARERAKGRILPAYM----------------------------------P 134

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N M +  +         +H T EP    +     +SGC+R+ N
Sbjct: 135 GGPNNPMGARAMYIG-STLYRIHGTTEPWTIGS---AVSSGCIRLAN 177


>gi|300822238|ref|ZP_07102379.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 119-7]
 gi|300931206|ref|ZP_07146550.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 187-1]
 gi|301645490|ref|ZP_07245426.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 146-1]
 gi|300460977|gb|EFK24470.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 187-1]
 gi|300525121|gb|EFK46190.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 119-7]
 gi|301076226|gb|EFK91032.1| ErfK/YbiS/YcfS/YnhG [Escherichia coli MS 146-1]
          Length = 277

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 65  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 124

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 125 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 149

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 150 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 197


>gi|297201860|ref|ZP_06919257.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
 gi|297147990|gb|EDY56806.2| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
          Length = 559

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V +++  L   G      G+   F    +SAVK FQ   GL+  G V  +T  A
Sbjct: 495 GDKGQRVVQVQCMLTKRGYSVGGSGVDGEFGRDTQSAVKQFQSAKGLEVDGQVGPNTWAA 554

Query: 165 MNVP 168
           +   
Sbjct: 555 LRSS 558


>gi|254412420|ref|ZP_05026194.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180730|gb|EDX75720.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 178

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 87  DILSRGGWPELPIRP------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            I+    W  L          L+ G+    V  ++  L ++ D      +   F    E 
Sbjct: 77  GIVDSLTWQALYQGAPVNMPVLNRGSRHDMVIPVQWVLHLTQDYS--APIDGDFGEQTER 134

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           AV+ FQ RHGL   G+V   T  A++ 
Sbjct: 135 AVRSFQKRHGLVEDGVVSEPTWYALSQ 161


>gi|153010337|ref|YP_001371551.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562225|gb|ABS15722.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 255

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 40/185 (21%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A N    +R  Q+    +              ++++     L  V++G   +R  V VG+
Sbjct: 92  AANPATTVRKHQIDPAYLPQTVSYSGNEKPGTIVIDTGKRFLYLVQSGGKAMRYGVGVGK 151

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               +     RI+R    P W  P+ +I ++                             
Sbjct: 152 QG-FSWKGSQRISRKAEWPTWTPPKEMIARE----------------------------- 181

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                   +      R + G  N + +  +         +H T +P      +   +SGC
Sbjct: 182 ------RKKGRILPARMEGGINNPLGARALYLG-STLYRIHGTNQPWTIGKAM---SSGC 231

Query: 344 VRVRN 348
           +R+RN
Sbjct: 232 IRMRN 236


>gi|319651464|ref|ZP_08005592.1| hypothetical protein HMPREF1013_02204 [Bacillus sp. 2_A_57_CT2]
 gi|317396779|gb|EFV77489.1| hypothetical protein HMPREF1013_02204 [Bacillus sp. 2_A_57_CT2]
          Length = 173

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 47/170 (27%), Gaps = 57/170 (33%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                    G  +++VN     +  + + KV    T   G+ D  TP     +     NP
Sbjct: 20  WPLGPNPLPGDPFLIVNKQTNEVAFIHDHKVQSVITAATGKTDDLTPEGMFTVTVKAANP 79

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                                 Y +  +I                               
Sbjct: 80  ----------------------YYRKKDIK----------------------------GG 89

Query: 303 GKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN 348
              N + +  I F + +       +H T +P       R+ ++GC+R++N
Sbjct: 90  DPRNPLGTRWIGFDAEDTDGRIYGIHGTNDPASIG---RYVSNGCIRLQN 136


>gi|239990210|ref|ZP_04710874.1| hypothetical protein SrosN1_23088 [Streptomyces roseosporus NRRL
           11379]
          Length = 350

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 4/140 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G+ S  V+ L+ RL   G    +      + +    AV+ FQ +  L  +G  
Sbjct: 141 PRVLMRTGSESDRVRELQARLRQIGHFGRTPT--GYYGSVTADAVRSFQAKRSLPVTGST 198

Query: 158 DSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGL 215
           D  T + +  +       +L+    R     +++ +  R + ++  + +L  + +GKV  
Sbjct: 199 DEVTWQRLRAMTRVPTAAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVS 258

Query: 216 RSTVIVGRVDRQTPILHSRI 235
              V  G     T      +
Sbjct: 259 AMDVRFGSDYTPTREGVFEV 278


>gi|17231786|ref|NP_488334.1| hypothetical protein all4294 [Nostoc sp. PCC 7120]
 gi|17133430|dbj|BAB75993.1| all4294 [Nostoc sp. PCC 7120]
          Length = 508

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +  G   +    L  G++  +V RL++RL   G   P+   +  F      AV  FQ + 
Sbjct: 206 AATGSVGVESPVLSEGSTGQAVTRLQQRLRQLGYFSPNPTGN--FRGITRDAVMAFQRKA 263

Query: 150 GLDPSGMVDSSTLEAMNVPVDLR 172
           GL  +G+V+  T  A+       
Sbjct: 264 GLPITGVVNQQTWNALGGVAQAP 286



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 10/165 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIA 76
               +G  + + P    +    + +    + +   F+         +  D  +  +    
Sbjct: 275 TWNALG-GVAQAPNRPGLSTPQVRDLQQRLRDLGYFNGNPTGSIGAMTRDAIVRFQRDYR 333

Query: 77  QTEKAIAFYQDILS-RGGWPELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            T   IA  Q + +    W +          L +G+   +V+ +++RL   G    +  L
Sbjct: 334 LTADGIADVQILQAVSRVWEDRYANQPNRNLLTVGDRGNNVRAVQQRLTQLGFF--TGSL 391

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
              FD Y  ++V  FQ  + L+P+G VDS T +A+N+        
Sbjct: 392 DGYFDEYTRASVASFQQYYQLNPTGNVDSQTWQALNINGSPIAEI 436



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           T++A+       + G    +    L LG+   +V +L++ L        +   +  F + 
Sbjct: 121 TQRALQRACRSATPG---AISRGDLRLGSRGAAVSQLQQNLRRLRYF--NGPNTGYFGSE 175

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + AV  FQ  + +   G+V + T +A+ 
Sbjct: 176 TQQAVIRFQRANRIGADGIVGNQTAQAIR 204



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 23/127 (18%)

Query: 96  ELPIRPL---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +    L    +G++   V  ++  L   G    +  ++  F +   S V  FQ  + L 
Sbjct: 55  SVAGEALALQKVGSTGSEVAEIQRCLKRLGFF--NGPVNGRFASITRSGVIGFQRANRLA 112

Query: 153 PSGMVDSSTLEAMNV------------------PVDLRIRQLQVNLMRIKKLLEQKMGLR 194
             G+V   T  A+                         + QLQ NL R++       G  
Sbjct: 113 ADGVVGGGTQRALQRACRSATPGAISRGDLRLGSRGAAVSQLQQNLRRLRYFNGPNTGYF 172

Query: 195 YVLVNIP 201
                  
Sbjct: 173 GSETQQA 179


>gi|119383021|ref|YP_914077.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119372788|gb|ABL68381.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 317

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 21/119 (17%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIIS 121
               +      E  A+ E A   YQ +  R          L  G+  V+V+RL+  L I 
Sbjct: 156 AARYNGNANVAEYSARIETA---YQKLSGRA-----SPVVLRSGDKGVAVRRLQYALGI- 206

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-----VPVDLRIRQ 175
                   +  +F    + AV+ FQ RHGL   G+V   T +A+       PV     Q
Sbjct: 207 -------DVDGSFGPDTDKAVRDFQKRHGLTVDGVVGQRTWKALEGYSGIQPVKQPAAQ 258


>gi|328887740|emb|CAJ69599.2| putative cell wall protein [Clostridium difficile]
          Length = 644

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 23  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 82

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 83  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 139

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 140 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 187


>gi|296451772|ref|ZP_06893498.1| cell surface protein [Clostridium difficile NAP08]
 gi|296880100|ref|ZP_06904068.1| cell surface protein [Clostridium difficile NAP07]
 gi|296259382|gb|EFH06251.1| cell surface protein [Clostridium difficile NAP08]
 gi|296428914|gb|EFH14793.1| cell surface protein [Clostridium difficile NAP07]
          Length = 653

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 32  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 91

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 92  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 148

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 149 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 196


>gi|255656698|ref|ZP_05402107.1| cell surface protein [Clostridium difficile QCD-23m63]
          Length = 644

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 23  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 82

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 83  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 139

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 140 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 187


>gi|255101881|ref|ZP_05330858.1| cell surface protein [Clostridium difficile QCD-63q42]
 gi|255307750|ref|ZP_05351921.1| cell surface protein [Clostridium difficile ATCC 43255]
          Length = 644

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 23  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 82

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 83  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 139

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 140 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 187


>gi|254976305|ref|ZP_05272777.1| cell surface protein [Clostridium difficile QCD-66c26]
 gi|255093691|ref|ZP_05323169.1| cell surface protein [Clostridium difficile CIP 107932]
 gi|255315441|ref|ZP_05357024.1| cell surface protein [Clostridium difficile QCD-76w55]
 gi|255518106|ref|ZP_05385782.1| cell surface protein [Clostridium difficile QCD-97b34]
 gi|255651222|ref|ZP_05398124.1| cell surface protein [Clostridium difficile QCD-37x79]
 gi|306521068|ref|ZP_07407415.1| cell surface protein [Clostridium difficile QCD-32g58]
          Length = 644

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 23  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 82

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 83  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 139

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 140 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 187


>gi|126700327|ref|YP_001089224.1| cell surface protein [Clostridium difficile 630]
          Length = 653

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 32  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 91

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 92  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 148

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 149 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 196


>gi|260684287|ref|YP_003215572.1| cell surface protein [Clostridium difficile CD196]
 gi|260687946|ref|YP_003219080.1| cell surface protein [Clostridium difficile R20291]
 gi|260210450|emb|CBA64897.1| cell surface protein [Clostridium difficile CD196]
 gi|260213963|emb|CBE06051.1| cell surface protein [Clostridium difficile R20291]
          Length = 653

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 49/175 (28%), Gaps = 25/175 (14%)

Query: 246 IPRSIIQK---DMMALLRQDPQYLKDNN----IHMIDEKGKEVFVE--EVDWNSPEPPNF 296
           +P S        ++   +    Y  +N       +   K             N  +   +
Sbjct: 32  VPESSAASKHVIIVNSRKNTLGYFVNNKLVKEFRVATGKKGSETPTGKTKVVNKIKNRPY 91

Query: 297 IFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                PG    N +    +         +   +H               + GC+R+ N  
Sbjct: 92  YKGNIPGGSPRNPLGDRWMGLALKGTYGDTYGIHGNNNESSIGK---HISGGCIRMHNKD 148

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQF 405
               WL    P  S    + ++     + VK+A +  ++    + W  ++    +
Sbjct: 149 --VRWLFDQVPVGS----DVIIDYSNDSYVKIAAKYKINLN-QTGWKTENGKKYY 196


>gi|224583490|ref|YP_002637288.1| hypothetical protein SPC_1700 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224468017|gb|ACN45847.1| hypothetical protein SPC_1700 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 309

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNTN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|254430899|ref|ZP_05044602.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanobium sp. PCC 7001]
 gi|197625352|gb|EDY37911.1| ErfK/YbiS/YcfS/YnhG family protein [Cyanobium sp. PCC 7001]
          Length = 230

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 51/174 (29%), Gaps = 51/174 (29%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            R +++ +    +   ENG V  R  V +G     TP+   R+   + NP +   RS   
Sbjct: 98  RREIVLELGRREISLRENGLVVRRWPVAIGDPSTPTPVGTFRVENKVLNPRYQSTRSGKI 157

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
              +                                              G    +    
Sbjct: 158 NSTV----------------------------------------------GPQGPLGDRW 171

Query: 313 IEFYSR--NNTYMHDTPEPILFNNVVR-FETSGCVRV--RNIIDLDVWLLKDTP 361
           I F     N   +H TP    +    R   ++GCVR+   ++ +L   +   TP
Sbjct: 172 IGFKHSGTNQYGIHGTPTAWAWTVTSRAAVSNGCVRMLTPHVRELFDKVDIGTP 225


>gi|21223243|ref|NP_629022.1| lipoprotein [Streptomyces coelicolor A3(2)]
 gi|11544753|emb|CAC17656.1| putative lipoprotein [Streptomyces coelicolor A3(2)]
          Length = 281

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G  D+ T 
Sbjct: 77  KRGDTGRDVRELQARLRQVEWLV--DGPTGTYDDLTERAVSGFQGKRGLPRTGRTDTVTW 134

Query: 163 EAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + +        +     +          +    R + V+  + +L  + +G+     +V 
Sbjct: 135 QRLLGMSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKSSRTLRWMIDGRTVSTMSVR 194

Query: 221 VGRVDRQTPILHSRINRI 238
            G     T     ++   
Sbjct: 195 FGSQYTPTREGVFQVYWK 212


>gi|326790802|ref|YP_004308623.1| peptidoglycan-binding protein [Clostridium lentocellum DSM 5427]
 gi|326541566|gb|ADZ83425.1| Peptidoglycan-binding domain 1 protein [Clostridium lentocellum DSM
           5427]
          Length = 437

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL LG+S  +V+ ++    R+  +  L P   +   F+   + AVK FQ    L   
Sbjct: 353 PGSPLRLGDSGPAVRTIQMQLNRISQNFPLIPKVAVDGNFNEATQEAVKTFQKIFHLPQD 412

Query: 155 GMVDSSTLEAMNV 167
           G+V  ST   ++ 
Sbjct: 413 GIVGKSTWYEISR 425


>gi|239943759|ref|ZP_04695696.1| hypothetical protein SrosN15_22371 [Streptomyces roseosporus NRRL
           15998]
          Length = 321

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 4/140 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G+ S  V+ L+ RL   G    +      + +    AV+ FQ +  L  +G  
Sbjct: 112 PRVLMRTGSESDRVRELQARLRQIGHFGRTPT--GYYGSVTADAVRSFQAKRSLPVTGST 169

Query: 158 DSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGL 215
           D  T + +  +       +L+    R     +++ +  R + ++  + +L  + +GKV  
Sbjct: 170 DEVTWQRLRAMTRVPTAAELRPPTERPVAAPDERCLKGRVLCISKNSRTLAWMIDGKVVS 229

Query: 216 RSTVIVGRVDRQTPILHSRI 235
              V  G     T      +
Sbjct: 230 AMDVRFGSDYTPTREGVFEV 249


>gi|313115026|ref|ZP_07800517.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622645|gb|EFQ06109.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 165

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 3/80 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +     G     P   L  G+S  +V+ ++++L   G           F A   +AV+ F
Sbjct: 88  RYTAKHGLHVPYPGIALRSGSSGGTVRLVQQKLNSLG---ERLNADGRFGAATAAAVQRF 144

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q R+GL   G V   T E M
Sbjct: 145 QRRNGLTADGAVGEGTWEKM 164



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S   V  ++  L    D             F    E+AVK FQ+++ ++  G V 
Sbjct: 19  LQRGSSGPDVALVQTWLNGVRDACTWYSELKADGKFGISTENAVKEFQLKNKMNVDGKVG 78

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 79  ANTWNVL 85


>gi|284046013|ref|YP_003396353.1| transglycosylase [Conexibacter woesei DSM 14684]
 gi|283950234|gb|ADB52978.1| Transglycosylase domain protein [Conexibacter woesei DSM 14684]
          Length = 224

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+S   V +L+++L +            AF    E AV+ +Q + GL   G+V
Sbjct: 70  SDGVLKKGSSGPVVVQLQQKLGV--------PADGAFGPQTERAVRRYQKQKGLGVDGVV 121

Query: 158 DSSTLEAMNVPVDLRIRQ 175
              T  A+ + +     Q
Sbjct: 122 GPQTASALGISLATAQAQ 139


>gi|186683324|ref|YP_001866520.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186465776|gb|ACC81577.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 126

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ ++  L   G    +  +   + +   +AV  FQ  H +   G V + T
Sbjct: 54  LAPGSRGQAVRDVQAALQRLGFY--NGAVDGIYGSRTATAVATFQRSHRIVGDGRVGALT 111

Query: 162 LEAMNVPVDLRIRQ 175
            +A+   +  R R 
Sbjct: 112 WQALRSSIAPRRRS 125


>gi|329935475|ref|ZP_08285335.1| hypothetical protein SGM_0827 [Streptomyces griseoaurantiacus M045]
 gi|329304999|gb|EGG48866.1| hypothetical protein SGM_0827 [Streptomyces griseoaurantiacus M045]
          Length = 268

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G+S  +V  L++RL+   D+         +DA + +AV  FQ+ +G+     G+
Sbjct: 194 AGTLREGDSGPAVSELQQRLLRVPDVYRDGATDGHYDAVLRAAVARFQLWYGIRGDESGV 253

Query: 157 VDSSTLEAMN 166
               T   + 
Sbjct: 254 YGDDTRRDLE 263


>gi|289769547|ref|ZP_06528925.1| lipoprotein [Streptomyces lividans TK24]
 gi|289699746|gb|EFD67175.1| lipoprotein [Streptomyces lividans TK24]
          Length = 282

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G  D+ T 
Sbjct: 78  KRGDTGRDVRELQARLRQVEWLV--DGPTGTYDDLTERAVSGFQGKRGLPRTGRTDTVTW 135

Query: 163 EAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + +        +     +          +    R + V+  + +L  + +G+     +V 
Sbjct: 136 QRLLGMSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKSSRTLRWMIDGRTVSTMSVR 195

Query: 221 VGRVDRQTPILHSRINRI 238
            G     T     ++   
Sbjct: 196 FGSQYTPTREGVFQVYWK 213


>gi|320193269|gb|EFW67907.1| L,D-transpeptidase ErfK [Escherichia coli WV_060327]
          Length = 274

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 65  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 124

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 125 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 149

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 150 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 197


>gi|282555158|gb|ADA82676.1| L,D-transpeptidase [endosymbiont of Polyrhachis turneri]
          Length = 311

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 44/185 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPY 243
           L+        +++N     L    +N    +   + +G ++  TP    + I +   NP 
Sbjct: 91  LILPDTPHEGIIINSAEMRLFFYPKNNNTVIIFPIGIGEIEHHTPFNWITSIQKKKHNPT 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W+  ++I  +           Y+   +I                              PG
Sbjct: 151 WIPTQNIKNE-----------YIARGDIP------------------------PKIVPPG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M S  +          H T     F   +R    GCVR+    D+  +L    P  
Sbjct: 176 PQNPMGSHALYIGKLYAI--HGTNSN--FGIGLRIX-HGCVRL-KTKDM-KYLFDHAPIG 228

Query: 364 SRYHI 368
           +R   
Sbjct: 229 TRVQF 233


>gi|237732014|ref|ZP_04562495.1| protein erfK/srfK [Citrobacter sp. 30_2]
 gi|226907553|gb|EEH93471.1| protein erfK/srfK [Citrobacter sp. 30_2]
          Length = 309

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     G        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVINVAEMRLYYYPAGSNTVEVLPIGIGQAGRETPRNWVTAVERKQEAPSWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAARGESLPAFVPAGPENPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-YHIEEVV 372
                     H T     F   +R  + GC+R+RN  D   +L    P  +R   I+  V
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDTVPVGTRVQLIDRPV 235

Query: 373 KTRKT----TPVKLATEV 386
           K  +       V++   +
Sbjct: 236 KYSEEPDGSRWVEVHEPL 253


>gi|303230788|ref|ZP_07317535.1| putative protein P60 [Veillonella atypica ACS-049-V-Sch6]
 gi|302514548|gb|EFL56543.1| putative protein P60 [Veillonella atypica ACS-049-V-Sch6]
          Length = 264

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  ++++LI  G    +   +  +    + AV+LFQ   GL   G++  +T
Sbjct: 30  LQYGDKGRNVIAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGIIGPAT 87

Query: 162 LEAMNVPVDLRIRQLQVNLM 181
             A+          L  N  
Sbjct: 88  YNALMGAPRTTKTVLSNNAA 107


>gi|227889892|ref|ZP_04007697.1| S41A family carboxy-terminal peptidase [Lactobacillus johnsonii
           ATCC 33200]
 gi|227849336|gb|EEJ59422.1| S41A family carboxy-terminal peptidase [Lactobacillus johnsonii
           ATCC 33200]
          Length = 483

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +         FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMPKYVT--GVFDDKTKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 452 QAQLYLAVAQKLQDDNSALKKAMSLNLKDMED 483


>gi|156743286|ref|YP_001433415.1| peptidoglycan binding domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234614|gb|ABU59397.1| Peptidoglycan-binding domain 1 protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 629

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 95  PELPIRPLHLGNSSV-SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P+     L  G+S    +  L+ERL   G   P+  +   F    ++A + FQ RHGL  
Sbjct: 94  PQSSRPTLRQGSSHAEDITFLQERLNSDG-ATPALEVDGIFGPLTDAATREFQRRHGLIV 152

Query: 154 SGMVDSSTLEAMNV 167
            G+V   T  A+N 
Sbjct: 153 DGIVGPQTWGALNA 166


>gi|38234908|ref|NP_940675.1| putative hydrolase [Corynebacterium diphtheriae NCTC 13129]
 gi|38201173|emb|CAE50897.1| Putative hydrolase [Corynebacterium diphtheriae]
          Length = 402

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 57/170 (33%), Gaps = 26/170 (15%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDIPIISKE 73
           L    S V   +        I E   ++           +    + D   DS+   +  E
Sbjct: 3   LAKERSSVSGTLRVGDRSPRIAEVRTALTRLGLLEGTTKNLEQTKSDTFTDSE--TLFDE 60

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQRLRER 117
            +A   +     + I++ G   E+ ++ L      LG                V +L+ +
Sbjct: 61  DLALALQGFQQARGIIASGEINEITLKLLREASYSLGARVLSFEPNNIFVGDDVVQLQHQ 120

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L   G    +  +   F     +++  +Q+ +GL+P G+    T+ A   
Sbjct: 121 LQELGFY--TDRVDGRFGELTYTSLVNYQLNYGLNPDGICGPETIRAFGR 168


>gi|222080789|ref|YP_002542517.1| hypothetical protein Arad_10009 [Agrobacterium radiobacter K84]
 gi|221725468|gb|ACM28557.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 331

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 45/142 (31%), Gaps = 18/142 (12%)

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM------IDE 276
           + DR+  +  S I R + +     P +I+       L             +         
Sbjct: 177 KDDRRASLARSPIPRTVVSFSGYDPGTIVISTKEKRLYLVLNDGTALKYGIGVGKQGFAW 236

Query: 277 KGKEVFVEEVDWNSPEPPN--------FIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           KG E    + +W +  PP            R D G  N + +  +         +H T E
Sbjct: 237 KGTETISRKAEWPTWTPPKEMIARRPELPDRMDGGLNNPLGARALYLG-STLYRIHGTNE 295

Query: 329 PILFNNVVRFETSGCVRVRNII 350
           P          +SGC+R+ N  
Sbjct: 296 PNSIGK---AVSSGCIRMANPD 314


>gi|169632015|ref|YP_001705664.1| N-acetylmuramoyl-L-alanine amidase CwlM [Mycobacterium abscessus
           ATCC 19977]
 gi|169243982|emb|CAM65010.1| N-acetylmuramoyl-L-alanine amidase CwlM [Mycobacterium abscessus]
          Length = 395

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHG 150
              +  G+   +V  +RE L   G L+    +           FDA ++ AV+ FQ   G
Sbjct: 5   ASNIRHGDRGPAVTEVREVLTALGFLEDPDEVLATGRHVMVDRFDATLDDAVRAFQQCRG 64

Query: 151 LDPSGMVDSSTLE 163
           L   G+V  +T  
Sbjct: 65  LLVDGIVGPATYR 77



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 10/98 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I+   T    ++A   Y+ + +R  + +              V  L++RL   G    + 
Sbjct: 70  IVGPATYRTLKEA--SYR-LGARTLFHQFSAP-----MYGDDVATLQKRLQDLGFY--TG 119

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F     +++  +Q  +GL   G+    TL +  
Sbjct: 120 LVDGNFGLQTYNSLMSYQREYGLTADGICGPETLRSFQ 157


>gi|258591429|emb|CBE67730.1| General secretion pathway protein A [NC10 bacterium 'Dutch
           sediment']
          Length = 574

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 82  IAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           I  Y D      W  PEL   P+  G     V+ LRER      +         FD  + 
Sbjct: 472 IDRYWDGPFILLWKAPELSSVPIRPGARGKDVEWLRERFAEFDGVPGGGRDRQVFDNDLR 531

Query: 140 SAVKLFQMRHGLDPSGMVDSSTL----EAMNVPVDLRIR 174
           + V  FQ    L   G+V   TL     A   P   R+R
Sbjct: 532 TRVIAFQRSRSLTADGVVGKETLTHLSAAQRDPKVPRLR 570


>gi|256785652|ref|ZP_05524083.1| lipoprotein [Streptomyces lividans TK24]
          Length = 270

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G  D+ T 
Sbjct: 66  KRGDTGRDVRELQARLRQVEWLV--DGPTGTYDDLTERAVSGFQGKRGLPRTGRTDTVTW 123

Query: 163 EAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + +        +     +          +    R + V+  + +L  + +G+     +V 
Sbjct: 124 QRLLGMSHEPGKWDLYLMGGQPAAAPDPRCTSGRVLCVSKSSRTLRWMIDGRTVSTMSVR 183

Query: 221 VGRVDRQTPILHSRINRI 238
            G     T     ++   
Sbjct: 184 FGSQYTPTREGVFQVYWK 201


>gi|168184305|ref|ZP_02618969.1| zinc carboxypeptidase family protein [Clostridium botulinum Bf]
 gi|237794727|ref|YP_002862279.1| zinc carboxypeptidase family protein [Clostridium botulinum Ba4
           str. 657]
 gi|182672655|gb|EDT84616.1| zinc carboxypeptidase family protein [Clostridium botulinum Bf]
 gi|229260492|gb|ACQ51525.1| zinc carboxypeptidase family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 423

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E AVK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--DVGLIDGIFGSKTEEAVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LE 163
            E
Sbjct: 62  YE 63


>gi|258508400|ref|YP_003171151.1| carboxyl-terminal protease [Lactobacillus rhamnosus GG]
 gi|257148327|emb|CAR87300.1| Carboxyl-terminal protease [Lactobacillus rhamnosus GG]
 gi|259649714|dbj|BAI41876.1| protease [Lactobacillus rhamnosus GG]
          Length = 480

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD SG 
Sbjct: 390 INATQLKPGDKGSDVKSLQQMLKAL--KIGSATVNGQYDDATQAAVKSFQEANELDASGT 447

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL A+   +  ++ +
Sbjct: 448 ADQDTLAALAQKLSAQLTK 466


>gi|328911454|gb|AEB63050.1| L,D-transpeptidase [Bacillus amyloliquefaciens LL3]
          Length = 160

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 16/128 (12%)

Query: 236 NRIMFNPY--WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           + I+ N      IP SI+       L+     L      +       + V ++   +P  
Sbjct: 44  HIIIPNLPDPSTIPYSIVVYIGAKKLQ-----LYRLGRLIRTY---PIAVGKILTTTPTG 95

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IID 351
             +I  + P       +  +     +   +H T +P          + GC+R+ N  + +
Sbjct: 96  EFYIVNRQPKPGGPFGAYWLSLSKLH-YGIHGTNDPSSIGK---AVSKGCIRMHNQDVTE 151

Query: 352 LDVWLLKD 359
           L   + + 
Sbjct: 152 LAATVPRR 159


>gi|325915197|ref|ZP_08177520.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538557|gb|EGD10230.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 341

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G     VQ L++ L   G  D           F      AV  FQ +HGL   G+V 
Sbjct: 149 LKRGIRGDEVQSLQQDLNRLGVRDTQGNRLAEDGRFGDNTREAVMAFQKQHGLQQDGVVG 208

Query: 159 SSTLEAMNVP 168
             T  A++ P
Sbjct: 209 RDTRAALSAP 218


>gi|269955412|ref|YP_003325201.1| ErfK/YbiS/YcfS/YnhG family protein [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304093|gb|ACZ29643.1| ErfK/YbiS/YcfS/YnhG family protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 326

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 67/255 (26%), Gaps = 72/255 (28%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P  P   G++   V  L++RL+  G           +    + AV  FQ   GL   
Sbjct: 124 PPAPQYPQR-GSTGPEVLALQQRLMDLGYF--ILKADGDYGWATQQAVWAFQKAAGLYRD 180

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+V   T  A++                      +    + V +++    L AVE+G+V 
Sbjct: 181 GVVGPQTQAALDAGYRP---------------TPRSSSGKVVEIDLDKQILLAVEDGRVV 225

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
                  G  +       +             PR                Y++ + +H  
Sbjct: 226 RIINASSGNGETYEAKGRTY--------RATTPRGDFA-----------VYMQRDGMH-- 264

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
                                            +       Y R    +H +        
Sbjct: 265 ----------------------------SSTLELGDMWRPKYFRGGYAVHGSSS-----I 291

Query: 335 VVRFETSGCVRVRNI 349
                + GCVRV N 
Sbjct: 292 PTYPASHGCVRVSNA 306


>gi|88808386|ref|ZP_01123896.1| hypothetical protein WH7805_01812 [Synechococcus sp. WH 7805]
 gi|88787374|gb|EAR18531.1| hypothetical protein WH7805_01812 [Synechococcus sp. WH 7805]
          Length = 218

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 33/161 (20%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  + +G +  R    VG V  +TP    R+ +++  P W  P S   + +   +  +
Sbjct: 84  RQLLVLHDGLLTRRFPAAVGTVGWETPSGRFRVMQMVKEPVWTHPVS--GELLGPEVANN 141

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           P   +    H  D KG++       W+  +  +       G                   
Sbjct: 142 PLGSRWIGFH-RDCKGRK------GWDGEQYLDIDGCTVAG------------------- 175

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            H TP         R  + GCVR+   N+ ++   +   TP
Sbjct: 176 FHGTPYRWTVG---RAVSHGCVRLYEENVQEIFEMVRIGTP 213


>gi|167037413|ref|YP_001664991.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115826|ref|YP_004185985.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856247|gb|ABY94655.1| SpoIID/LytB domain [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|319928917|gb|ADV79602.1| SpoIID/LytB domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 762

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 32/98 (32%), Gaps = 2/98 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G    +   +  F +    AV  FQ  + L P G+V 
Sbjct: 216 TRTLKYGMQGNDVKELQNALAKLGYF--NTTPTGYFGSITRDAVIKFQKANNLTPDGIVG 273

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
             T +A+   +  + +Q        K            
Sbjct: 274 PLTQKAIQGLLAGKDQQASQPTDSPKIQYPSGFSRNMK 311



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 12/130 (9%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQT-EKAIA-FYQDILSRGG--------WPE 96
              D F        M +  D  ++         EKA+      I                
Sbjct: 55  NPTDYFGPATKNAVMRLQKDYNLVPDGIYGPLTEKALMDKLNAISKATTQTSNTSLQTQS 114

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              R L  G     V+ L+  L   G    +   +  F +    AV  FQ  + L P G+
Sbjct: 115 TVTRTLKYGMQGNDVKELQNALAKLGYF--NTTPTGYFGSITRDAVIKFQKANNLTPDGI 172

Query: 157 VDSSTLEAMN 166
           V   T +A++
Sbjct: 173 VGPLTQKAIS 182



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R +  G++   V+ L+  L   G       ++  +D    +AV  FQ  + L   G+  
Sbjct: 307 SRNMKKGDTGDDVKLLQTLLKEIGYYTKD--ITGTYDDNTLNAVMDFQKYYSLAVDGIAG 364

Query: 159 SSTLEAM 165
            +T+  +
Sbjct: 365 INTITKV 371



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 16/160 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +      F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANPTD-YFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN--- 210
            +A+                  LQ      + L     G     +    A L        
Sbjct: 88  EKALMDKLNAISKATTQTSNTSLQTQSTVTRTLKYGMQGNDVKELQNALAKLGYFNTTPT 147

Query: 211 ---GKVGLRSTVIVGRVDRQTPIL-HSRINRIMFNPYWVI 246
              G +   + +   + +  TP      + +   +    +
Sbjct: 148 GYFGSITRDAVIKFQKANNLTPDGIVGPLTQKAISEKLNV 187


>gi|89894299|ref|YP_517786.1| hypothetical protein DSY1553 [Desulfitobacterium hafniense Y51]
 gi|219668710|ref|YP_002459145.1| NLP/P60 protein [Desulfitobacterium hafniense DCB-2]
 gi|89333747|dbj|BAE83342.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538970|gb|ACL20709.1| NLP/P60 protein [Desulfitobacterium hafniense DCB-2]
          Length = 232

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 17/129 (13%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+   +V  L+  L   G       +   F A  ++AV+ FQ    +   G+V   T
Sbjct: 30  LKVGSRGSAVSTLQSNLQTLGY--EVGPIDGIFGAKTKTAVQKFQTASRIQVDGIVGPQT 87

Query: 162 LEAMNV---------------PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            +A+                     + + +         +     G      +    +  
Sbjct: 88  QQALTKALGSKTTALESKSTANPSQKTQAILSTAKNYTGVPYLWGGTTPSGFDCSGFTQY 147

Query: 207 AVENGKVGL 215
             E   + L
Sbjct: 148 VFEKNGITL 156


>gi|332711683|ref|ZP_08431614.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349661|gb|EGJ29270.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 542

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 9/88 (10%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            +  +     Y + ++    P +      LG+    V RL+  L   G       +   +
Sbjct: 33  FSNLKTVQGRYSEEIALP--PTV-----RLGSQGEVVTRLQTILQQLGYYQQ--PVDGVY 83

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +   +AV  FQ   GL+  G+V   T 
Sbjct: 84  GSNTFAAVSTFQQALGLNADGIVGPITW 111


>gi|290955397|ref|YP_003486579.1| hypothetical protein SCAB_8241 [Streptomyces scabiei 87.22]
 gi|260644923|emb|CBG68009.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 265

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L  G+S   V  L++RL+   D+      S  +D  ++ AV  FQ+ +G+     G+
Sbjct: 191 AGTLREGDSGPQVSELQQRLLRIPDVYAGGSTSGRYDGVLKDAVARFQLWYGIRGDETGV 250

Query: 157 VDSSTLEAMN 166
             + T + + 
Sbjct: 251 YGNDTRQDLE 260


>gi|255283144|ref|ZP_05347699.1| putative peptidoglycan binding domain protein [Bryantella
           formatexigens DSM 14469]
 gi|255266217|gb|EET59422.1| putative peptidoglycan binding domain protein [Bryantella
           formatexigens DSM 14469]
          Length = 1954

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 17/154 (11%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSI--VNDRFDNFLARVDMGIDSDIPIISKETIA 76
              +   + +  I   V ++ I E   S     D        ++    S        +  
Sbjct: 378 WDKLTGKIKDAGIETDVFEDKIKEVARSSNVPIDALVQKYGSLEKAFQS-----GAISAN 432

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGN----SSVSVQRLRERLIISGDLDPSKGLSV 132
              +AI      +               G+    +S  V+++++ L  +G      G+  
Sbjct: 433 ILREAIKQLSSGVLD------LDGVFRFGDGLDEASDDVKKIQQALEDAGFTLTQFGVDG 486

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + +  E+AVK FQ   GL   G+V   T+ A+N
Sbjct: 487 KYGSETEAAVKAFQEAEGLLADGIVGPETIAALN 520


>gi|229543921|ref|ZP_04432980.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus coagulans 36D1]
 gi|229325060|gb|EEN90736.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus coagulans 36D1]
          Length = 167

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 44/164 (26%), Gaps = 59/164 (35%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G   ++VN     L  +  GKV L + V  G+ +  TP     I     NP        
Sbjct: 24  PGDPLIIVNKTTNRLAWIRGGKVRLETPVATGKTNDLTPEGFFTIKVKAKNP-------- 75

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMA 309
                         Y +  NI                               G   N + 
Sbjct: 76  --------------YYRKKNI-----------------------------PGGDPRNPLG 92

Query: 310 STKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           S  I F           +H T  P       R+ ++GC+R+   
Sbjct: 93  SRWIGFDARGTDGRIYGLHGTNNPASIG---RYISNGCIRLPKA 133


>gi|85714009|ref|ZP_01044998.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85699135|gb|EAQ37003.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 172

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 50/193 (25%), Gaps = 45/193 (23%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAASLEAVENGKVGLRS 217
           T  A  +        L +     +  + +  G      ++V      L  + +    LR 
Sbjct: 3   TRAAAVLAALWGAGLLAIVPAEARPDMVRYQGDYAPGTIVVRTNERRLYLIIDSGRALRY 62

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V VG+  +Q     +RI     +P W  P  + + +    +                  
Sbjct: 63  PVGVGKAGKQ-WTGTARIEGKYRDPAWAPPEDVKRDN--PKIANVIA------------- 106

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                                       N M    +         +H T  P       R
Sbjct: 107 -----------------------GGSPANPMGVAAMTLSGGGQYAIHGTNRPGTIG---R 140

Query: 338 FETSGCVRVRNII 350
           F + GC+R+ N  
Sbjct: 141 FVSYGCIRMYNAD 153


>gi|309810394|ref|ZP_07704228.1| Tat pathway signal sequence domain protein [Dermacoccus sp.
           Ellin185]
 gi|308435634|gb|EFP59432.1| Tat pathway signal sequence domain protein [Dermacoccus sp.
           Ellin185]
          Length = 233

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 59/246 (23%), Gaps = 73/246 (29%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   +V  L++RL   G    +     AF A  + AV   Q   GL   G+V + 
Sbjct: 38  VLQTGSKGSAVTTLQKRLNALGYWCGNP--DGAFGAQTKQAVLAVQKVAGLARDGVVGAR 95

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           + +A+N  V                    + G   + V+     +  V  G V       
Sbjct: 96  SWDALNRGVR----------------PSSRRGGNRIEVDKSRQIVMVVRGGSVKYIFNTS 139

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            G                                                      + K 
Sbjct: 140 TG--------------------------------------------NGQTFTYYGRRIKA 155

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
           V          E   +          A+      FY      +H + +           +
Sbjct: 156 VTPSG------EYKTYRSVTSGWDYGALGGLYRPFYFNGGIALHGSND-----IPAYPAS 204

Query: 341 SGCVRV 346
            GC R+
Sbjct: 205 HGCCRM 210


>gi|303229441|ref|ZP_07316231.1| putative protein P60 [Veillonella atypica ACS-134-V-Col7a]
 gi|302515977|gb|EFL57929.1| putative protein P60 [Veillonella atypica ACS-134-V-Col7a]
          Length = 264

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  ++++LI  G    +   +  +    + AV+LFQ   GL   G++  +T
Sbjct: 30  LQYGDKGRNVIAVQQQLIKHGY--NATDKNGVYGKETKWAVRLFQQDRGLPVDGIIGPAT 87

Query: 162 LEAMNVPVDLRIRQLQVN 179
             A+          L  N
Sbjct: 88  YNALMGAPRTTKAVLSNN 105


>gi|28210107|ref|NP_781051.1| spore-cortex-lytic enzyme precursor [Clostridium tetani E88]
 gi|28202543|gb|AAO34988.1| spore-cortex-lytic enzyme precursor [Clostridium tetani E88]
          Length = 255

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V  ++++L   G  D S  +   +      AVK FQ ++GL+  G+  + TL A
Sbjct: 67  GSKGGDVSEIQKKLKNWGYYDGS--VDGIYGYKTFLAVKKFQGKNGLNVDGVAGNKTLAA 124

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + + V         N   I  L     G 
Sbjct: 125 LGINVAQAQGSNTSNNQDINLLARLINGE 153


>gi|148258177|ref|YP_001242762.1| hypothetical protein BBta_6969 [Bradyrhizobium sp. BTAi1]
 gi|146410350|gb|ABQ38856.1| hypothetical protein BBta_6969 [Bradyrhizobium sp. BTAi1]
          Length = 219

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 +  R   G  N + +  I     +++  Y +H T +P          +SGC+R+
Sbjct: 124 QARLGPYPKRVPGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQ---AISSGCIRM 180

Query: 347 RN 348
            N
Sbjct: 181 TN 182


>gi|332982674|ref|YP_004464115.1| cell wall hydrolase SleB [Mahella australiensis 50-1 BON]
 gi|332700352|gb|AEE97293.1| cell wall hydrolase SleB [Mahella australiensis 50-1 BON]
          Length = 238

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 48/161 (29%), Gaps = 8/161 (4%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG+       L +G+S   V +L+  L   G       ++  + +    AV  FQ   G
Sbjct: 30  SGGYTHAASTILKVGSSGSQVSQLQTALKQQGYF--YANVTGYYGSLTRDAVIRFQKDRG 87

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNL-MRIKKLL---EQKMGLRYVLVNIPAASLE 206
           L   G+    TL A+        R    N    I  L    E + G    L  +   ++ 
Sbjct: 88  LAADGIAGPQTLNALYGASSTANRGTTGNYREDIYWLARIIEAEAGAEPYLGKVAVGNVI 147

Query: 207 AVENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
                          ++       P      +  ++N    
Sbjct: 148 MNRVKSPNFANSVKAVIFEDYHGIPQFSPVADGTIYNTPST 188


>gi|158321567|ref|YP_001514074.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158141766|gb|ABW20078.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 198

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+S   V RL+  L+ +G       +   F +   SAV  FQ    +   G+V   T
Sbjct: 71  LSMGSSGPDVTRLQHLLMSAGY--NPGPIDGIFGSMTHSAVMAFQRDSHIAVDGIVGPRT 128

Query: 162 LEAMNVP 168
             A+ V 
Sbjct: 129 WTALGVN 135


>gi|311279034|ref|YP_003941265.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
 gi|308748229|gb|ADO47981.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae SCF1]
          Length = 313

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L      G       + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IIINVAEMRLYYYPPGGNTVQVLPIGIGQAGRETPRNWVTAVERKQEGPTW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPENPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  +
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQV 230


>gi|331658059|ref|ZP_08359021.1| protein ErfK/srfK [Escherichia coli TA206]
 gi|331056307|gb|EGI28316.1| protein ErfK/srfK [Escherichia coli TA206]
          Length = 307

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R  +
Sbjct: 183 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQV 230


>gi|329667436|gb|AEB93384.1| DNA protecting protein [Lactobacillus johnsonii DPC 6026]
          Length = 483

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +     ++  FD   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMPK--HVTGVFDDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 452 QAQLYLAVAQKLQDDNPALKKAMSLNLKDMED 483


>gi|295705154|ref|YP_003598229.1| cell wall endopeptidase [Bacillus megaterium DSM 319]
 gi|294802813|gb|ADF39879.1| cell wall endopeptidase [Bacillus megaterium DSM 319]
          Length = 391

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    LH G S+  V+ L+++L   G        +  + +   SAVK FQ  +GL   G
Sbjct: 24  ALGDATLHPGTSNSDVKELQQKLKNKGYFT-YGTTTNYYGSITTSAVKSFQRANGLSADG 82

Query: 156 MVDSSTLE 163
           +   ST  
Sbjct: 83  IAGPSTFN 90



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++  +VQ L+++L   G        +  F +  ++AV  FQ  +GL   G+   +TL
Sbjct: 110 RVGSTGPNVQSLQQQLKNKGYFK--GTTTQYFGSITKNAVMAFQRANGLSVDGIAGPATL 167

Query: 163 EAMN 166
             + 
Sbjct: 168 SKLK 171



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +V  L+++L   G      G++  F +   SAVK FQ  +GL   G     T
Sbjct: 190 LRQGMKGSAVSSLQQKLKNKGYFS--AGVTGYFGSITTSAVKSFQRANGLLVDGEAGPDT 247

Query: 162 LEAMN 166
           L  +N
Sbjct: 248 LNKLN 252


>gi|294499766|ref|YP_003563466.1| cell wall endopeptidase [Bacillus megaterium QM B1551]
 gi|294349703|gb|ADE70032.1| cell wall endopeptidase [Bacillus megaterium QM B1551]
          Length = 388

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    LH G S+  V+ L+++L   G        +  + +   SAVK FQ  +GL   G
Sbjct: 24  ALGDATLHPGTSNSDVKELQQKLKNKGYFT-YGTTTNYYGSITTSAVKSFQRANGLSADG 82

Query: 156 MVDSSTLE 163
           +   ST  
Sbjct: 83  IAGPSTFN 90



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G++  +VQ L+++L   G        +  F +  ++AV  FQ  +GL   G+   +TL
Sbjct: 107 RVGSTGPNVQSLQQQLKNKGYFK--GTTTQYFGSITKNAVMAFQRANGLSVDGIAGPATL 164

Query: 163 EAMN 166
             + 
Sbjct: 165 SKLK 168



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +V  L+++L   G      G++  F +   SAVK FQ  +GL   G     T
Sbjct: 187 LRQGMKGSAVSSLQQKLKNKGYFS--AGVTGYFGSITTSAVKSFQRANGLLVDGEAGPDT 244

Query: 162 LEAMN 166
           L  +N
Sbjct: 245 LNKLN 249


>gi|115379890|ref|ZP_01466951.1| hypothetical protein STIAU_1822 [Stigmatella aurantiaca DW4/3-1]
 gi|310817668|ref|YP_003950026.1| hypothetical protein STAUR_0390 [Stigmatella aurantiaca DW4/3-1]
 gi|115363106|gb|EAU62280.1| hypothetical protein STIAU_1822 [Stigmatella aurantiaca DW4/3-1]
 gi|309390740|gb|ADO68199.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 586

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPS--KGLSVAFDAYVESAVKLFQMRHGLDP 153
            LP + L  G+    V++L++ L+  G +  +        F    E+A+K FQ  HG+D 
Sbjct: 326 TLPNQQLKRGSKGEGVEKLQDALVKLGYMTKAQVATGPGTFGPKTEAALKKFQKDHGVDA 385

Query: 154 SGMVDSSTLEAMNV 167
            G     T  A   
Sbjct: 386 IGEYGPKTRAAFEK 399


>gi|323701875|ref|ZP_08113545.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
 gi|323533179|gb|EGB23048.1| spore cortex-lytic enzyme [Desulfotomaculum nigrificans DSM 574]
          Length = 225

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 2/104 (1%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  R L LG     VQ+L+  L   G       +   F     +AVK FQ R+GL   G+
Sbjct: 18  LGDRTLKLGMEGYDVQQLQRNLGYLGY--NVGQVDGYFGWQTWAAVKEFQWRNGLSVDGI 75

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           V  +T  A+   V     Q        +  L+      Y L  +
Sbjct: 76  VGVATANAIINQVSGGQAQRPRITSASRGYLQLSRQDLYDLARV 119


>gi|218677982|ref|ZP_03525879.1| putative ErfK/YbiS/YhnG family protein [Rhizobium etli CIAT 894]
          Length = 133

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 40/144 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V  G    R  V VG+   +      +I R    P W  P  +I ++          
Sbjct: 11  LYLVMAGGKARRYGVGVGKPGFE-WAGVHKITRKTEWPDWTPPAEMISRE---------- 59

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G+ N + +  +         +H
Sbjct: 60  -AAKGHY------------------------LPARMDGGEENPLGARAMYLG-STLYRIH 93

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 94  GTNAPWSIGS---AVSSGCIRLRN 114


>gi|295399077|ref|ZP_06809059.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110319|ref|YP_003988635.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
 gi|294978543|gb|EFG54139.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215420|gb|ADP74024.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
          Length = 167

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 47/176 (26%), Gaps = 61/176 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             +V++N     L  ++NGK+     V  G     TP     +     NP          
Sbjct: 26  QPFVIINKAVNQLALIDNGKIETVYPVATGVNTLLTPEGMFTVTVKAKNP---------- 75

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMAST 311
                       Y +  NI                               G   N + + 
Sbjct: 76  ------------YYRKKNI-----------------------------PGGAPDNPLGTR 94

Query: 312 KIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            I F ++        +H T  P        + + GCVR+ N  +  L   +   T 
Sbjct: 95  WIGFNAKGTDGRVYGIHGTNNPPSIGK---YVSQGCVRMYNHDVEQLYEKVPIGTK 147


>gi|150392091|ref|YP_001322140.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149951953|gb|ABR50481.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 253

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + +  G+    V  ++ RL   G L+    L   +   +E A+  FQ  H L  S +++ 
Sbjct: 183 QTIKPGDFGADVMEIQSRLRALGYLNTD-YLDGKYGPMMERALYEFQKDHNLPESAVIEW 241

Query: 160 STLEAMNV 167
            T +A+ V
Sbjct: 242 QTFQALGV 249



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 21/132 (15%)

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE---KGKEVFVEEVDWNSPE 292
           ++++          I+    +  L     YL + N  +       GK      +      
Sbjct: 51  HQMLEENPNYENVKILVDISVKKL-----YLLNGNELLKTYTIASGKPSTPSPLGSWE-- 103

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--I 349
                  Q      A  +  +          +H T +P          ++GC+R+ N  +
Sbjct: 104 -----VIQKARWGGAFGTRWMGINVPWGKYGIHGTDKPNSIGYN---ASAGCIRMNNRDV 155

Query: 350 IDLDVWLLKDTP 361
            DL  ++   TP
Sbjct: 156 EDLYQYVKNGTP 167


>gi|307149992|ref|YP_003885376.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
 gi|306980220|gb|ADN12101.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
          Length = 516

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 7/99 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L++ L        +      F    + AVK FQ+R GL   G V S T
Sbjct: 285 LRWGDKGDDVKALQQALNRLNF--NAGAADGDFGDQTQEAVKAFQLRSGLLVDGEVGSVT 342

Query: 162 LEAMNVPVDLRIRQLQ-----VNLMRIKKLLEQKMGLRY 195
            E +     + +  L          +++         +Y
Sbjct: 343 WEKLGGTGKVILPNLASFAASEAAKKLRWNGASSDAEKY 381


>gi|304404834|ref|ZP_07386495.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
 gi|304346641|gb|EFM12474.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
          Length = 217

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G  SV V  L+ RL + G   P   ++  +    + AV+ FQ  +GL   G+  S 
Sbjct: 32  ALRYGYQSVDVPDLQFRLKVLGYFKP-AQVTTYYGMMTQDAVERFQSDYGLPADGVAGSK 90

Query: 161 TLEAMNV 167
           T   +  
Sbjct: 91  TWSLLKR 97


>gi|172041696|ref|YP_001801410.1| putative hydrolase [Corynebacterium urealyticum DSM 7109]
 gi|171853000|emb|CAQ05976.1| putative hydrolase [Corynebacterium urealyticum DSM 7109]
          Length = 408

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 32/180 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG------------LSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L                     FDA + +A++ FQ + 
Sbjct: 21  LTVGDKSPRVAEVRSALARLGMLSDYGAALTASNNEQWSEEEEFFDAVLATALRAFQQQR 80

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
           G+   G+++ +TL A+      R    ++    +     Q +G     +      L    
Sbjct: 81  GIIADGVINETTLRAL------REASYKLGNRVLSLQDPQYVGDDVSELQSQLYDLGFY- 133

Query: 210 NGKVGLRSTVIVGRV-------------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
            G+V         +                  P     +  +        P SI +K+M+
Sbjct: 134 TGRVDGHFGPDTHQAVTQYQFEYGLNSDGMVGPDTLRALAYLGRRITGGSPHSIREKEMI 193



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 21/155 (13%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGI----DSDIPIISKETIAQTEKAIAFYQ 86
           +        + E   ++      +              S+        +A   +A    +
Sbjct: 21  LTVGDKSPRVAEVRSALARLGMLSDYGAALTASNNEQWSEEEEFFDAVLATALRAFQQQR 80

Query: 87  DILSRG-----GWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLS 131
            I++ G         L      LGN              V  L+ +L   G    +  + 
Sbjct: 81  GIIADGVINETTLRALREASYKLGNRVLSLQDPQYVGDDVSELQSQLYDLGFY--TGRVD 138

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             F      AV  +Q  +GL+  GMV   TL A+ 
Sbjct: 139 GHFGPDTHQAVTQYQFEYGLNSDGMVGPDTLRALA 173


>gi|170744639|ref|YP_001773294.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168198913|gb|ACA20860.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 271

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 39/189 (20%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R ++     +R       +     V+++  A  L  V+ G    R  V VGR     
Sbjct: 103 PAFRWQRANPAFLRQDVAYGGRYEPGTVVIDPRAHHLYLVQPGGRARRYGVGVGRQGFA- 161

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
              ++ IN     P W  P+ +I +     L +    L+                     
Sbjct: 162 WSGNATINSKQAWPDWYPPKEMIARQ--PALARQVSQLQSG------------------- 200

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +  +  +++  Y +H T EP       R  +SGC+R
Sbjct: 201 ---------LGVPGGPHNPLGARAMYLWQNNKDTLYRIHGTTEPESIG---RSVSSGCIR 248

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 249 MINQDVIDL 257


>gi|308068719|ref|YP_003870324.1| spore cortex-lytic enzyme precursor (Germination-specific amidase)
           [Paenibacillus polymyxa E681]
 gi|305857998|gb|ADM69786.1| Spore cortex-lytic enzyme precursor (Germination-specific amidase)
           [Paenibacillus polymyxa E681]
          Length = 283

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 9/161 (5%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++   P      +  G+    V  L+ RL + G       +   F +    AVK FQ  
Sbjct: 44  AAQPSQPTFSSGAVDFGSYGQDVYELQSRLKLLGFF--GGKVDSHFGSSTLKAVKGFQKE 101

Query: 149 HGLDPSGMVDSST-LEAMNVPV--DLRIRQLQVNLM---RIKKLLEQKMGLRYVLVNIPA 202
            G+ P G+V   T L+ +N           +  N     + +         +       A
Sbjct: 102 FGIRPDGVVGPKTKLKLVNATPNWKPTETPMHRNNQGSAQGQAADNNDKADQNDETMGSA 161

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            ++   EN    + +  + G    +       +  ++ N  
Sbjct: 162 NTMGLSENDLKIM-ANAVYGESRGEPFEGQVAVAAVILNRV 201


>gi|148257457|ref|YP_001242042.1| hypothetical protein BBta_6213 [Bradyrhizobium sp. BTAi1]
 gi|146409630|gb|ABQ38136.1| hypothetical protein BBta_6213 [Bradyrhizobium sp. BTAi1]
          Length = 231

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 48/194 (24%)

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           + +  TL            +L   L R       +     V+++ P   L  V      +
Sbjct: 53  VAEPQTLAPSEDDAT--AYELPARLRRQVVNYATREAPGTVIIDTPNTYLYYVLGNGQAM 110

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           R  + VGR D  T      + R    P W  P  +I +           YL  +      
Sbjct: 111 RYGIGVGR-DGFTWSGTQSVTRKAEWPDWTPPPEMIARQP---------YLPRH------ 154

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNN 334
                                      G  N + +  +        Y +H T +P     
Sbjct: 155 ------------------------MAGGPGNPLGARAMYL--GGTIYRIHGTNQPATIGT 188

Query: 335 VVRFETSGCVRVRN 348
                +SGC+R+ N
Sbjct: 189 ---HVSSGCIRLTN 199


>gi|290510824|ref|ZP_06550194.1| ycfS [Klebsiella sp. 1_1_55]
 gi|289777540|gb|EFD85538.1| ycfS [Klebsiella sp. 1_1_55]
          Length = 321

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++     TP + + ++    NP W  
Sbjct: 98  DAPREGLVINLAELRLYYYPPGKNEVTVYPIGIGQLGGTTITPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 158 TANIRAR-----------------------------------YKAMGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|251794953|ref|YP_003009684.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
 gi|247542579|gb|ACS99597.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
          Length = 341

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 89/318 (27%), Gaps = 68/318 (21%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ +    G    P   L  G+    V +L+  L++  D          F +  +S    
Sbjct: 60  YEQVAKVNG--LNPTGSLKAGS----VIKLKSPLVL--DYYEVLPGDTLF-SITKS---Y 107

Query: 145 FQMRHGLDP----SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           F   + +D     +G+ D +T   + +               ++  L    G  +V+   
Sbjct: 108 FNRSNYMDTLMTYNGITDPNTELHIGMT--------------LRIPLPSGEGRHHVVKGD 153

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA--- 257
              SL       +  +  V           +      +     + +  +     + A   
Sbjct: 154 TLYSLSVKYFKSLDYQKAVAQTNGVGTAASMIQAGQELQIPNPYYMAAAKSGNTVAATTS 213

Query: 258 -------LLRQDPQYLKDNN-----IHMIDEKGKEVFVE---------EVDWNSPEPPNF 296
                   + ++  Y+K          +   K   +            E  W S +    
Sbjct: 214 TKLSIDIDITKNKLYVKSGGTVKKTFDIASGKKAGLTPTGTFEILTKIENPWYSAKGIP- 272

Query: 297 IFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                    N + S  +     N       +H T  P          ++GC+R+ N    
Sbjct: 273 ----GGDPKNPLGSRWLGISVPNTQGTKYGIHGTNAPSSIGTN---ASAGCIRMLNED-- 323

Query: 353 DVWLLKDTPTWSRYHIEE 370
             WL    PT ++  I +
Sbjct: 324 VEWLYNAVPTGTKVTIHK 341


>gi|206558510|ref|YP_002229270.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           cenocepacia J2315]
 gi|198034547|emb|CAR50412.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           cenocepacia J2315]
          Length = 283

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+    V  L+ RLI +G    +  ++  +DA  E+AV   Q + GL   G+   
Sbjct: 2   KTRRLGDHGDDVGLLQRRLIRAGY---AVQITHLYDAATEAAVIALQRKTGLVDDGIAGP 58

Query: 160 STLEAMNVPVDLRIRQLQVNLMR 182
            T  A+   +         +L R
Sbjct: 59  KTYAALATGLRDPKHLGLADLER 81


>gi|39937280|ref|NP_949556.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|39651138|emb|CAE29661.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
          Length = 255

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 50/182 (27%), Gaps = 46/182 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            QL   L R       K     ++++     L  V  G   +R  V VGR    T     
Sbjct: 77  AQLPDRLRRAVISYPTKEPAGTIVIDTANTYLYYVLGGGRAIRYGVGVGREG-FTWAGVQ 135

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I R    P W  P  +I +                                        
Sbjct: 136 TITRKAEWPDWRPPAEMIARQ--------------------------------------- 156

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IID 351
           P        G  N + +  +         +H T +P        F +SGC+R+ N  + D
Sbjct: 157 PYLPRFMAGGPGNPLGARAMYLG-STTYRIHGTNDPSTIGK---FVSSGCIRLTNEDVED 212

Query: 352 LD 353
           L 
Sbjct: 213 LF 214


>gi|222106793|ref|YP_002547584.1| hypothetical protein Avi_5810 [Agrobacterium vitis S4]
 gi|221737972|gb|ACM38868.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 266

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 58/192 (30%), Gaps = 40/192 (20%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +  +  +A  +P   ++       +      + +     ++++     L  V +G +  R
Sbjct: 96  LRPALQQASAMPAPRQMSATPAQFLPQVVAYQTREKPGTLVIDTNNRFLYLVMDGGMARR 155

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             V VG+   +      ++ R    P W+ P+ +I ++               +      
Sbjct: 156 YGVGVGKPGFE-WAGEHKVTRKTEWPEWIPPQEMIARE-----------AAKGHY----- 198

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                                 R   G  N + +  +         +H T  P       
Sbjct: 199 -------------------LPARMQGGPENPLGARALYLG-STLYRIHGTNAPWTIGYG- 237

Query: 337 RFETSGCVRVRN 348
              +SGC+R+RN
Sbjct: 238 --VSSGCIRMRN 247


>gi|331663480|ref|ZP_08364390.1| protein ErfK/srfK [Escherichia coli TA143]
 gi|331059279|gb|EGI31256.1| protein ErfK/srfK [Escherichia coli TA143]
          Length = 310

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 49/172 (28%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN  D   +L  + P  +R
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTR 227


>gi|225572655|ref|ZP_03781410.1| hypothetical protein RUMHYD_00843 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039987|gb|EEG50233.1| hypothetical protein RUMHYD_00843 [Blautia hydrogenotrophica DSM
           10507]
          Length = 610

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 54/175 (30%), Gaps = 23/175 (13%)

Query: 9   KILYCFFVYLILPMGLS---LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS 65
           +       Y+ +    S   +V   +        +     +++   FD      D     
Sbjct: 362 RNYPGIDGYVWIDYTDSSEAVVRDYLQLGDTGPAVKTMQQNLITLGFDVGAFGADG---- 417

Query: 66  DIPIISKETIAQTEKAIAFY-------------QDILSRGGWPELPIRPLHLGNSSVSVQ 112
                 ++T A  ++A   Y               I +     +     L +G+    V+
Sbjct: 418 ---SFGQDTQAAVKQAQKKYGLTVDGFYGPDTKSKIEAAVKEQQAGKDFLCVGDQGGQVK 474

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  LI  G    + G    F A  E+AVK FQ   GLD        TL  +  
Sbjct: 475 ELQSNLIYLGYDCGASGADGDFGADTEAAVKAFQKACGLDADSCAGPKTLAKIKA 529



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++  +V+ +++ LI  G    + G   +F    ++AVK  Q ++GL   G     T
Sbjct: 387 LQLGDTGPAVKTMQQNLITLGFDVGAFGADGSFGQDTQAAVKQAQKKYGLTVDGFYGPDT 446

Query: 162 LEAMNVPVDL 171
              +   V  
Sbjct: 447 KSKIEAAVKE 456


>gi|294497041|ref|YP_003560741.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
 gi|294346978|gb|ADE67307.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
          Length = 178

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 33/120 (27%), Gaps = 17/120 (14%)

Query: 255 MMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDW----NSPEPPNFIFRQDPG--KIN 306
           ++        Y  +  +        GK      V +    N  +   +      G    N
Sbjct: 39  IINKKTNQLAYFHNGKLEKTYSVATGKTWSDTPVGFFKIVNKIKNRPYYTGHIAGGAPNN 98

Query: 307 AMASTKIEFYS----RNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            + S  +   +     +   +H             + + GCVR+ N    +L   +   T
Sbjct: 99  PLGSLWLGLNANGTTGDTYAIHGNNSEDSIGK---YVSHGCVRMHNADIEELFDKVAVGT 155


>gi|256825620|ref|YP_003149580.1| peptidoglycan-binding domain-containing protein [Kytococcus
           sedentarius DSM 20547]
 gi|256689013|gb|ACV06815.1| putative peptidoglycan-binding domain-containing protein
           [Kytococcus sedentarius DSM 20547]
          Length = 279

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 69/252 (27%), Gaps = 72/252 (28%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++  R L  G+ +  V   + ++  +G           + A  E AV   Q  +GL   G
Sbjct: 40  QVQRRTLRKGDRNDDVLYFQRKIRSAGFWA--GTPDGVYGAQTEQAVWAVQKAYGLRRDG 97

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +V +ST  A                     +  +    RY+ +++    L  V +G+V  
Sbjct: 98  VVGNSTWLAAIRQPR---------------IPVKTTKGRYIEIDLDRQLLFYVVDGQV-- 140

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
                  +    T   + +     +N  W       +                       
Sbjct: 141 -------KQVHNTSTGNGKGYW--YNKKWYPHAKTPRG---------------------- 169

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK-IEFYSRNNTYMHDTPEPILFNN 334
                       W S    +  +R        +       F++     +H       F  
Sbjct: 170 -----------TWRSMWNTDSGWRV-----GQLGRMWRPYFFAPGGYAIHG----STF-I 208

Query: 335 VVRFETSGCVRV 346
               ++ GC R+
Sbjct: 209 PPYPDSHGCARL 220


>gi|163758391|ref|ZP_02165479.1| hypothetical protein HPDFL43_02160 [Hoeflea phototrophica DFL-43]
 gi|162284680|gb|EDQ34963.1| hypothetical protein HPDFL43_02160 [Hoeflea phototrophica DFL-43]
          Length = 256

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 46/178 (25%), Gaps = 39/178 (21%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
              RQL    +              +++N     L  V       R  V VG+       
Sbjct: 99  KPARQLAPQFLPQTVAYNGGEKPGTIIINTHERFLYHVMGNGQARRYGVGVGKQGHA-WS 157

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
              RI R    P W  P S+I++                                     
Sbjct: 158 GTERITRKAEWPDWRPPASMIKRV----------------------------------RE 183

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            E          G  N + +  +         +H T +P          +SGC+R+RN
Sbjct: 184 QEGRILPAHMKGGPDNPLGARALYLG-STLYRIHGTNQPWTIGQ---AVSSGCIRMRN 237


>gi|206577781|ref|YP_002239266.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288936123|ref|YP_003440182.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
 gi|206566839|gb|ACI08615.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Klebsiella
           pneumoniae 342]
 gi|288890832|gb|ADC59150.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella variicola At-22]
          Length = 319

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++     TP + + ++    NP W  
Sbjct: 96  DAPREGLVINLAELRLYYYPPGKNEVTVYPIGIGQLGGTTITPTMVTTVSDKRANPTWTP 155

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 156 TANIRAR-----------------------------------YKAMGIELPAVVPAGPDN 180

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 181 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 220


>gi|86139725|ref|ZP_01058292.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
 gi|85823616|gb|EAQ43824.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
          Length = 248

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 55/225 (24%)

Query: 139 ESAVKLFQMRHGLDPSGMVD---SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
           + A++ F  R  L  +G +     +T  A  V +  R     +N  R   +     G  +
Sbjct: 53  DRAMQNF-TRRELICAGALGCFLPTTAWAHKVKLPERFEPQLINTRRDDWMN----GDIH 107

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V+ +     L  +    + +R  V VGR     P     ++R    P+W    ++I+++ 
Sbjct: 108 VVPD--DFFLYFMLEDGMAIRYGVGVGRKGLYEP-GEFTVDRKAKWPWWRPTNAMIRREP 164

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +   +      G  N + +  +  
Sbjct: 165 -----------------------------------HKYAKYKDGLKGGPNNPLGARALYL 189

Query: 316 YSRNN--TY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
           +  +   TY  +H T  P    +     ++GC R+ N  + DL  
Sbjct: 190 HDDDGRDTYLRIHGTNAPETIGS---AVSNGCARLTNEHVKDLYD 231


>gi|329999558|ref|ZP_08303455.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
 gi|328538288|gb|EGF64429.1| protein ErfK/srfK [Klebsiella sp. MS 92-3]
          Length = 321

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++     TP + + ++    NP W  
Sbjct: 98  DAPREGLVINLAELRLYYYPPGKNEVTVYPIGIGQLGGTTITPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 158 TANIRAR-----------------------------------YKAMGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|295394855|ref|ZP_06805068.1| N-acetylmuramoyl-L-alanine amidase [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972188|gb|EFG48050.1| N-acetylmuramoyl-L-alanine amidase [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 378

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +  +H G+S   V  ++ +L   G        S  FD   ES ++ FQ   G+   G+
Sbjct: 1   MTVSSIHPGDSDPLVATVKAQLHRLGY--QCDPSSDLFDHQFESVIREFQQSRGIVVDGV 58

Query: 157 VDSSTLEAMNV 167
           + + T + + +
Sbjct: 59  IGAETFKELEI 69



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 47/155 (30%), Gaps = 28/155 (18%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
             IH    D ++      +    +    +            +         +     + I
Sbjct: 4   SSIHPGDSDPLVATVKAQLHRLGYQCDPSS----------DLFDHQFESVIREFQQSRGI 53

Query: 89  LSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSV 132
           +  G      + EL I    LG+               V  L+ RL   G    S     
Sbjct: 54  VVDGVIGAETFKELEIARYKLGDRVLRFDPVRPLQGDDVTELQHRLSRLGVYTESITFE- 112

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            F +   +AV+  Q   GL P G+V  STL A++ 
Sbjct: 113 -FGSATHNAVREIQNELGLSPDGVVGPSTLAALSA 146


>gi|254412152|ref|ZP_05025927.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181118|gb|EDX76107.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 734

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 95  PELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +  RP   L  G+ +  V  L+  L ++G    +  ++  + +  + AV   Q   GL
Sbjct: 154 PAVSARPNFILQRGDRNSQVTSLQRNLQVAGYF--NGPITGYYGSTTQDAVIQLQQAKGL 211

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
              GM    T  A+         Q   +  
Sbjct: 212 TVDGMAGPKTRAALESTPVSSASQTAPSTE 241



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+ +  V  L+  L   G  D    ++  +    E+AV  +Q   GL   GMV
Sbjct: 252 PGLVLKRGSRNSDVTALQRTLQAQGYYD--GPITGYYGNLTENAVIQYQKAKGLTVDGMV 309

Query: 158 DSSTLEAMNVPVD 170
            ++T  A+ +P  
Sbjct: 310 GANTKAALELPSA 322



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 6/109 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+  L  GNS   V  L++ L   G    +  ++  +    E+AV  FQ  +GL P G+V
Sbjct: 61  PVLALRKGNSGAEVTNLQKTLQAEGYF--NGPITGYYGPLTEAAVIQFQQANGLSPDGIV 118

Query: 158 DSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
            ++T   +           L   L             +  +   P   L
Sbjct: 119 GTNTTATLESDSAAATDASLDTPLE---FESPIPEPEKPAVSARPNFIL 164


>gi|160931660|ref|ZP_02079054.1| hypothetical protein CLOLEP_00491 [Clostridium leptum DSM 753]
 gi|156869305|gb|EDO62677.1| hypothetical protein CLOLEP_00491 [Clostridium leptum DSM 753]
          Length = 574

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 14/184 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              +  G++   V  L+ RLI+   +      S  FD   E+AVK +Q  + L+ +G+VD
Sbjct: 353 AAVIKKGDAGEEVTELQNRLILLRYMIGDA--SGTFDDATEAAVKEYQTTNSLEATGIVD 410

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +  + +     LR             L    +G     + +  A L+  + G  G    
Sbjct: 411 KAMKDVLYSDKALRSP-------EADNLKLGYVGDDVKALQMKLAKLDLYQGGASGT--- 460

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
               +   Q        N +       +   I    ++  L   P Y ++ ++ +     
Sbjct: 461 --FDKATEQAVKSFEEENGLRVTGVADLTVRIAIDAVINSLDLGPTYARNTDMTVQAAAI 518

Query: 279 KEVF 282
            E+ 
Sbjct: 519 TEID 522



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P  P  L LG+S   V +L++RL   G    + G +  F  Y    +K FQ + G + +G
Sbjct: 201 PAEPVYLQLGSSGAEVAKLQQRLAELGYF--NDGATEYFGEYTAECLKAFQAKAGYEATG 258

Query: 156 MVDSST 161
           ++D  T
Sbjct: 259 ILDPDT 264



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  +  +  ++++LI    +         +    ++AV  FQ   GL+ +G+ D++T   
Sbjct: 284 GEFAEEIHTIQQKLIQLQYMTGETT--GFYGDQTKAAVAKFQTVVGLESTGVYDNTTRSK 341

Query: 165 MNVPVDL 171
           +      
Sbjct: 342 LEASDAP 348


>gi|284028974|ref|YP_003378905.1| ErfK/YbiS/YcfS/YnhG family protein [Kribbella flavida DSM 17836]
 gi|283808267|gb|ADB30106.1| ErfK/YbiS/YcfS/YnhG family protein [Kribbella flavida DSM 17836]
          Length = 281

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +S  V+++  RLI    LD    L  +F     SAVK FQ   G+   G VD +T + 
Sbjct: 76  GATSPDVRKVEARLIQLKLLDKR-WLDASFGTSTRSAVKKFQTSKGIPALGYVDQNTWDQ 134

Query: 165 MNVPVDLRIRQ---LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +        +        ++  + L  +      + ++  +  L  V +G V ++  V  
Sbjct: 135 LKAATREPTQTELFPPPPVVNGRPLDPRCATGVSLCIDKTSRKLRYVVDGAVKMQFDVRF 194

Query: 222 GRVDRQTPILHSRINRIMFN 241
           G     T      +     N
Sbjct: 195 GAQKTATREGGFSVGWKSRN 214


>gi|159898674|ref|YP_001544921.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891713|gb|ABX04793.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 319

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           ++   W  +       G+S  +V  ++  L   G    S  +   F A   SAVK FQ  
Sbjct: 29  VAARTWATVSN-----GDSGDNVYTVQAMLKQRGY---SLTVDGDFGAGTLSAVKSFQSS 80

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            GL   G+V  +T E + + V      + VN 
Sbjct: 81  KGLSADGVVGPNTWEQLVITVRQGDNNIVVNA 112



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 12/170 (7%)

Query: 7   INKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSI-------VNDRFDNFLARV 59
           ++K    +F  L + + +     P    V         +         V          +
Sbjct: 1   MHKRWAFWFSGLTMALVMLASFGPAAQGVAARTWATVSNGDSGDNVYTVQAMLKQRGYSL 60

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
            +  D     +S     Q+ K ++    ++    W +L    +  G++++ V  L+ +L 
Sbjct: 61  TVDGDFGAGTLSAVKSFQSSKGLSA-DGVVGPNTWEQLV-ITVRQGDNNIVVNALQRQLK 118

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             G    S  +   F A   SAVK FQ   GL   G+V + T  A+    
Sbjct: 119 KHG---HSLTVDGDFGAGTLSAVKSFQSSKGLGADGIVGADTWAALTGNP 165


>gi|152969665|ref|YP_001334774.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238894148|ref|YP_002918882.1| putative enzyme [Klebsiella pneumoniae NTUH-K2044]
 gi|150954514|gb|ABR76544.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546464|dbj|BAH62815.1| putative enzyme [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 319

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++     TP + + ++    NP W  
Sbjct: 96  DAPREGLVINLAELRLYYYPPGKNEVTVYPIGIGQLGGTTITPTMVTTVSDKRANPTWTP 155

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 156 TANIRAR-----------------------------------YKAMGIELPAVVPAGPDN 180

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 181 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 220


>gi|75906281|ref|YP_320577.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75700006|gb|ABA19682.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 160

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 87  DILSRGGWPELPIRP------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            I+    W  L          L  G+    V+ L++RL  +G    +  +   F    E+
Sbjct: 70  GIVGYKTWQALYEGRAIDLPILKYGSQGELVKALQQRLQNAGYY--TGLIDGDFSFVTEA 127

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +K FQ+R+ L   G+V   T   ++   
Sbjct: 128 GIKSFQLRNNLKVDGIVGDRTWTVLSNTP 156



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L+  L        S  +    D+     + LFQ R  +   G+V   
Sbjct: 18  TLKQGDTGEVVKELQRLLR--NYYCYSGPIDGVLDSETVGGIILFQHRVFIPEDGIVGYK 75

Query: 161 TLEAM 165
           T +A+
Sbjct: 76  TWQAL 80


>gi|324114140|gb|EGC08113.1| ykud domain-containing protein [Escherichia fergusonii B253]
          Length = 308

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     + +      + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  MVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFIPAGPENPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+R+      +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRDND--IKYLFDNVPVGTRVQI 231


>gi|218549337|ref|YP_002383128.1| hypothetical protein EFER_2002 [Escherichia fergusonii ATCC 35469]
 gi|218356878|emb|CAQ89509.1| conserved hypothetical protein; putative NAD(P)-binding
           Rossmann-fold domain [Escherichia fergusonii ATCC 35469]
          Length = 308

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     + +      + +G+  R+TP    + + R    P W    +  ++
Sbjct: 99  MVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 159 -----------------------------------YAKRGESLPAFIPAGPENPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+R+      +L  + P  +R  I
Sbjct: 184 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRDND--IKYLFDNVPVGTRVQI 231


>gi|292670157|ref|ZP_06603583.1| endopeptidase [Selenomonas noxia ATCC 43541]
 gi|292648109|gb|EFF66081.1| endopeptidase [Selenomonas noxia ATCC 43541]
          Length = 245

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 2/92 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G     V  L++ L  +G    +      F    E AV  FQ  + +  +G+V+++
Sbjct: 27  TLREGAHGHDVLILQQALQKAGYKIKNA--DGVFGKDTERAVAEFQRDNKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           T  A+      R   + +     K L     G
Sbjct: 85  TWRALKNAPSTRPWGVDIAPPTKKNLPLAPNG 116


>gi|304313095|ref|YP_003812693.1| General secretion pathway protein-related protein, ATPase [gamma
           proteobacterium HdN1]
 gi|301798828|emb|CBL47061.1| General secretion pathway protein-related protein, ATPase [gamma
           proteobacterium HdN1]
          Length = 632

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 17/162 (10%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +  S    ++       V   ++    R  + + S     + +     +     Y+    
Sbjct: 468 LTRSGSLGLLRHLGLPAVVTLYNGEGRRRFVVVRSMDSSAAGDARVLLQAGATQYEVSED 527

Query: 91  --RGGWP-------ELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV----AF 134
                W        ++P     PL  G  S  V  LR  L    DLD S+         +
Sbjct: 528 AFNRAWRGQFTLFWQVPASYRAPLMPGVISPLVPWLRNGLSQL-DLDVSEVAGQASGSLY 586

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           D  +   VK FQ + G    G+V   TL  +   +D  + +L
Sbjct: 587 DPALVERVKAFQRKQGEPADGIVGEMTLILLTRELDAHLPKL 628


>gi|260891972|ref|YP_003238069.1| spore cortex-lytic enzyme [Ammonifex degensii KC4]
 gi|260864113|gb|ACX51219.1| spore cortex-lytic enzyme [Ammonifex degensii KC4]
          Length = 228

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V R+++RL   G  D    +   F      AV+ FQ ++GL   G+V  +T  A
Sbjct: 36  GSTGWHVMRVQQRLAQWGYYD--GPIDGVFGYKTWKAVRYFQWKNGLAVDGVVGPATWAA 93

Query: 165 MNVP 168
           +  P
Sbjct: 94  LGFP 97


>gi|110635846|ref|YP_676054.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110286830|gb|ABG64889.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 195

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 62/193 (32%), Gaps = 45/193 (23%)

Query: 161 TLEAMNVPVDLRIRQLQV--NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           T +    P   R  ++++     R +           ++VN     L  VE      R  
Sbjct: 24  TRQLAPQPAPGRANRIEIDPQFRRQRVPYAGGEKPGTIIVNRDERFLYYVEGDGWATRYG 83

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V VG+  R T    + + R    P W    ++++++        P+YL+           
Sbjct: 84  VGVGKEGR-TLSGRAVVGRKAEWPSWTPTANMMRRE--------PRYLQ----------- 123

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNV 335
                            +      G  N + +  +      R+  Y +H T EP      
Sbjct: 124 -----------------YAGGVSGGPHNPLGARALYLYRNGRDTMYRLHGTNEPWSIGQ- 165

Query: 336 VRFETSGCVRVRN 348
               +SGC+R+ N
Sbjct: 166 --AVSSGCIRLLN 176


>gi|239828434|ref|YP_002951058.1| NLP/P60 protein [Geobacillus sp. WCH70]
 gi|239808727|gb|ACS25792.1| NLP/P60 protein [Geobacillus sp. WCH70]
          Length = 454

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             L    L +G+    V +L+++L   G       ++  +  +   AV+ FQ ++ L  +
Sbjct: 176 KTLQANALKIGSRGTEVSKLQQKLKQLGYFT-YPEITDYYGTFTAEAVRKFQEKNKLPVT 234

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G+ DS+TL  +N  +     Q
Sbjct: 235 GVADSATLAKINEAIASSEPQ 255



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 30/167 (17%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRF------DNFLARVDMGIDSDI- 67
           FV  +  M            +    I E    +    F        +   +         
Sbjct: 16  FVSALFLMPDDGKAAEWKVGMSSPQIKELQQLLKEKGFFTYPTATGYFGTITEQAVKAFQ 75

Query: 68  -----PIIS---KETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
                P+       T A+ + A A                  + +G+   +V+ L++ L 
Sbjct: 76  ASVRLPVTGIVDDATYAKLKGAAA--------------STAEMKIGSRGNNVKVLQQNLK 121

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + G       ++  +    + AVK FQ  +GL  +G+ D+ T++ + 
Sbjct: 122 LLGYF-RYPEITGYYGVITQEAVKKFQRNNGLSATGVADARTVQLIQ 167



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 11/162 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID-----SDIPIISK 72
            +    L +  +    S L + + +  +    +  D +       +      + +P+   
Sbjct: 177 TLQANALKIGSRGTEVSKLQQKLKQLGYFTYPEITDYYGTFTAEAVRKFQEKNKLPVTGV 236

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
              A     I   + I S    P  P     L  G++   V+ ++ +L   G    S  +
Sbjct: 237 ADSATL-AKIN--EAIASSEPQPSAPKAGIYLTTGSTGSEVKEVQTKLKQLGYFTYS-QI 292

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +  +     +AVK FQ    L  +G+VD+ T E +      R
Sbjct: 293 TGYYGTITANAVKSFQRDVNLKATGVVDTETYERLMGKAPQR 334



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G SS  ++ L++ L   G        +  F    E AVK FQ    L  +G+VD +T 
Sbjct: 33  KVGMSSPQIKELQQLLKEKGFFT-YPTATGYFGTITEQAVKAFQASVRLPVTGIVDDATY 91

Query: 163 EAMNVPVDLRIR 174
             +         
Sbjct: 92  AKLKGAAASTAE 103


>gi|251797492|ref|YP_003012223.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
 gi|247545118|gb|ACT02137.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. JDR-2]
          Length = 112

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 16/51 (31%), Gaps = 4/51 (7%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                     +     +   +H T +P       R  + GC+R+ N   L 
Sbjct: 51  NPGGPFGVLWMGLSKPH-YGIHGTNDPSSIG---RMVSHGCIRMYNEDVLA 97


>gi|226313688|ref|YP_002773582.1| spore cortex-lytic enzyme precursor [Brevibacillus brevis NBRC
           100599]
 gi|226096636|dbj|BAH45078.1| putative spore cortex-lytic enzyme precursor [Brevibacillus brevis
           NBRC 100599]
          Length = 215

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    +  G+ +  V  L+ RL + G  D    L   + A    AV+ FQ  +GL   G
Sbjct: 26  SLAATQIQRGSVNGDVWDLQYRLQMLGYYD--DKLDGIYGANTTKAVRQFQKAYGLRIDG 83

Query: 156 MVDSSTLEAM-NVPVDLRIRQLQVNL 180
           +   +T   +  V V+    Q+   L
Sbjct: 84  ITGPNTWRVLKKVSVNKAEMQMLAQL 109


>gi|319782245|ref|YP_004141721.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168133|gb|ADV11671.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 245

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 42/188 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVI 220
            A+  P    + + Q+N + + + ++   G +   ++++     L  VE      R  V 
Sbjct: 79  AAVQPPAKRMVARPQINPIYLPQEVDYDGGQKPGTIVIDTTQNFLFLVEKNGKARRYGVG 138

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            G+   +      +I      P W  P  +I+++  A  R  P YL              
Sbjct: 139 TGKPGFE-WSGTHKITNKREWPDWRPPAQMIKRE-AAKGRYLPTYLA------------- 183

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                                 G  N + +  +   +     +H T +P          +
Sbjct: 184 ---------------------GGMENPLGARALYLGTTE-YRIHGTNQPWTIG---GAVS 218

Query: 341 SGCVRVRN 348
           SGC+R+RN
Sbjct: 219 SGCIRMRN 226


>gi|302390285|ref|YP_003826106.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200913|gb|ADL08483.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 486

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+ L+  L   G       +   F     +AVK FQ ++GL   G+V   T
Sbjct: 86  LALGSYGQDVKLLQTMLNQRGY---KLKVDGIFGPKTLAAVKDFQKKNGLKVDGIVGPKT 142

Query: 162 LEAM 165
           L  +
Sbjct: 143 LAKL 146


>gi|258514282|ref|YP_003190504.1| glycoside hydrolase family 18 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257777987|gb|ACV61881.1| glycoside hydrolase family 18 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 426

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 64/209 (30%), Gaps = 18/209 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG+    V  L+ +L ++G       +S  F      AV  F+  + L   G
Sbjct: 31  SVTPGNLRLGDRGPDVTLLQTKLKVAGFYQGE-KVSGYFGLNTLFAVSKFEKANRLRVDG 89

Query: 156 MVDSSTLEAMNVP---VDLRIRQLQVNLM------RIKKLLEQKMGLRYVLVNIPAASLE 206
           +VD+    A+         +++++ +                      Y+   +   S +
Sbjct: 90  IVDAEEWIALQKLTAIPADKLKKMVLGYYTVDYTGDKLSYNSLDKYSSYID-TVATFSFK 148

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
              +G +         ++ +        +  ++       P           + ++   L
Sbjct: 149 VNRDGSLTGEVPQDALKLAK-----ERSVETLLLVHNIGQPIDSDAAHYALSVAENRSRL 203

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
           + N +  +   G       +D  +  P +
Sbjct: 204 EANIMSKVKANGY--NGVNIDIEALPPGD 230


>gi|119484927|ref|ZP_01619409.1| hypothetical protein L8106_15680 [Lyngbya sp. PCC 8106]
 gi|119457745|gb|EAW38869.1| hypothetical protein L8106_15680 [Lyngbya sp. PCC 8106]
          Length = 159

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V RL+ RL    D + +  ++  F +  E AVK FQ R GL   G+V   T
Sbjct: 94  LSFGSVGNDVIRLQNRL---NDFEINLLVNGIFASKTEGAVKQFQRRFGLTADGIVGPFT 150

Query: 162 LEAM 165
             A+
Sbjct: 151 WNAL 154



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +++ L+ERL I G       +   F    E+ VK FQ  + L   G+V S T 
Sbjct: 18  RRGSQGKTIKNLQERLSILGY---KLLIDEVFGMATEAMVKQFQRENRLLVDGIVGSETW 74

Query: 163 EAMNVPVDLRIRQLQ 177
             +     +    LQ
Sbjct: 75  NTLLKATSVPFEALQ 89


>gi|32491101|ref|NP_871355.1| hypothetical protein WGLp352 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166308|dbj|BAC24498.1| ybiS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 309

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +L+NI    L    +N +  +   V +G + ++TP    + + R  + P W  P   + K
Sbjct: 102 ILINIAEMRLFYFPKNFEKVVVLPVGIGEIGKETPSKWKTYVKRKKYAPTWT-PTKDMHK 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   S      +     GK N M    +
Sbjct: 161 E----------------------------------YSSLGIKLLKIYPSGKNNPMGLYAL 186

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-----YHI 368
                     H T     F   +R  T GC+R+RN  D+  +L  + P  +        +
Sbjct: 187 YLEDLYAI--HGTNTN--FGIGLR-VTHGCIRLRN-DDI-KYLFNNVPVGTEVYFINEPV 239

Query: 369 EEVVKTRKTTPVKLATEV 386
           +   ++     +++   +
Sbjct: 240 KVTHESDGNKYIEVHQPL 257


>gi|169631880|ref|YP_001705529.1| bacteriophage protein [Mycobacterium abscessus ATCC 19977]
 gi|169243847|emb|CAM64875.1| Bacteriophage protein [Mycobacterium abscessus]
          Length = 282

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 18/104 (17%)

Query: 86  QDILSRGGWPELPIRPLHL--------------GNSSVSVQRLRERLIISGDLDPSKGLS 131
           +DI  + G   +P                    G+    V +L+ RL   G       + 
Sbjct: 182 RDIQDQIGRVAIPAPTPRPSVPVGEYADVLLFRGSKGPQVSQLQRRLNEHG---ADLVVD 238

Query: 132 VAFDAYVESAVKLFQMR-HGLDPSGMVDSSTLEAMNVPVDLRIR 174
             F    E++V+ FQ R  GL   G+V  +T  A+ +  +  + 
Sbjct: 239 GIFGPNTEASVREFQRRARGLKVDGIVGPATAAALRLKAEPALE 282


>gi|227820976|ref|YP_002824946.1| putative exported ErfK/YbiS/YhnG family protein [Sinorhizobium
           fredii NGR234]
 gi|227339975|gb|ACP24193.1| putative exported ErfK/YbiS/YhnG family protein [Sinorhizobium
           fredii NGR234]
          Length = 249

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 58/206 (28%), Gaps = 47/206 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-----YVLVNIPAASLEAVENGKVGLRS 217
            A+      R ++   +    + L +            ++++     L  V       R 
Sbjct: 80  AAVQPAAAHRAQKPLKSQFDPQFLPQMVAYDTGEKPGTIVIDTNNRFLYLVTGDGQARRY 139

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V VG+   +      +I R    P W  P  +I ++               +       
Sbjct: 140 GVGVGKPGFE-WAGAHKITRKSEWPSWTPPGEMIARE-----------AAKGHY------ 181

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                                R D G  N + +  +         +H T  P        
Sbjct: 182 ------------------LPDRMDGGPANPLGARAMYLG-STLYRIHGTNAPWTIGYG-- 220

Query: 338 FETSGCVRVRN--IIDLDVWLLKDTP 361
             +SGC+R+RN  ++DL   +   T 
Sbjct: 221 -VSSGCIRMRNEDVVDLYERVKIGTK 245


>gi|323527783|ref|YP_004229936.1| peptidoglycan-binding domain 1 protein [Burkholderia sp. CCGE1001]
 gi|323384785|gb|ADX56876.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. CCGE1001]
          Length = 268

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 17/151 (11%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+    V  L+ RL  +G       ++  +D   E+AV+  Q + GL   G+    TL
Sbjct: 5   RLGDYGDDVGLLQRRLARAGF---QLDVTHVYDDATEAAVEEIQTKVGLVVDGIAGPKTL 61

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A+                    L +  +      + +P A + A+        +     
Sbjct: 62  AAIATGRRDPKH-----------LSDADIAKAADTLGVPIACVRAIN---EVESTGSGFL 107

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
              R   +    +       + + P  I  +
Sbjct: 108 GDGRPKILFERHVFWKRLQAHGIDPAPIAAR 138


>gi|194016792|ref|ZP_03055405.1| protein ErfK/srfK [Bacillus pumilus ATCC 7061]
 gi|194011398|gb|EDW20967.1| protein ErfK/srfK [Bacillus pumilus ATCC 7061]
          Length = 169

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 47/182 (25%), Gaps = 59/182 (32%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV++N     L  ++ G++        G+    TP     I            
Sbjct: 22  NPLPGDPYVIINKQTNELAYIDQGQIQKIYPASTGKTSDLTPEGEFTIMIK--------- 72

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                        +DP Y +  NI                                K N 
Sbjct: 73  ------------AKDPYY-RKKNIE----------------------------GGAKNNP 91

Query: 308 MASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +    I F           +H T +         F T+GCVR+ N  +  L   L   T 
Sbjct: 92  LGRRWIGFDARGTDGRTYGIHGTSDETSIGK---FITAGCVRLHNQDVELLFDQLPVGTK 148

Query: 362 TW 363
            W
Sbjct: 149 VW 150


>gi|114705544|ref|ZP_01438447.1| hypothetical protein FP2506_13799 [Fulvimarina pelagi HTCC2506]
 gi|114538390|gb|EAU41511.1| hypothetical protein FP2506_13799 [Fulvimarina pelagi HTCC2506]
          Length = 287

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 54/190 (28%), Gaps = 41/190 (21%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           ++T  A    V  R        +  +     +     ++++     L  VE   + +R  
Sbjct: 120 AATWPAPVREVAPR-HITSPEFLPQRVPYRSRHATGTIVIDTSQRFLYHVEPNGMAMRYG 178

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V VG+    +      I      P W  P+ +I ++                        
Sbjct: 179 VGVGKPG-FSWRGMHNITAKKKWPSWTPPKEMIARE------------------------ 213

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                        +  +       G  N + +  +         +H T +P         
Sbjct: 214 -----------KKKGRHLPSFMPGGVENPLGARALYLG-STLYRIHGTNQPWTIGQ---A 258

Query: 339 ETSGCVRVRN 348
            +SGC+R+RN
Sbjct: 259 VSSGCIRMRN 268


>gi|170754496|ref|YP_001781027.1| zinc carboxypeptidase family protein [Clostridium botulinum B1 str.
           Okra]
 gi|169119708|gb|ACA43544.1| zinc carboxypeptidase family protein [Clostridium botulinum B1 str.
           Okra]
          Length = 423

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V++++  L   G       +   F +  E  VK FQ+ +GL   G++   T
Sbjct: 4   LKKGDRGSDVRKIQAVLQKIGY--NVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPKT 61

Query: 162 LEAMNV 167
            E +N 
Sbjct: 62  YEVLNK 67


>gi|192293062|ref|YP_001993667.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286811|gb|ACF03192.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 255

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 50/182 (27%), Gaps = 46/182 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            QL   L R       K     ++++     L  V  G   +R  V VGR    T     
Sbjct: 77  AQLPDRLRRTVISYPTKEPAGTIVIDTANTYLYYVLGGGRAIRYGVGVGREG-FTWAGVQ 135

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I R    P W  P  +I +                                        
Sbjct: 136 TITRKAEWPDWRPPAEMIARQ--------------------------------------- 156

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IID 351
           P        G  N + +  +         +H T +P        F +SGC+R+ N  + D
Sbjct: 157 PYLPRFMAGGPGNPLGARAMYLG-STTYRIHGTNDPSTIGK---FVSSGCIRLTNEDVED 212

Query: 352 LD 353
           L 
Sbjct: 213 LF 214


>gi|315648072|ref|ZP_07901173.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
 gi|315276718|gb|EFU40061.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
          Length = 271

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G++   V  L+ RL   G       +   F +  + AVK FQ   G+   
Sbjct: 39  PTFSQQTIKFGSTGEDVYELQGRLKYLGFYH--GKIDSVFGSKTQGAVKWFQSEFGMKVD 96

Query: 155 GMVDSS 160
           G+V   
Sbjct: 97  GVVGPK 102


>gi|282555177|gb|ADA82690.1| L,D-transpeptidase [Candidatus Blochmannia sansabeanus]
          Length = 315

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L     N    +   + +G ++  TP    + +     NP W IP   ++ 
Sbjct: 102 IVINSAEMRLYYYPANSNTVITLPIAIGTIENATPYYWITSVKHKKKNPIW-IPTKNMRD 160

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +                                              G  N M    +
Sbjct: 161 EYIKR----------------------------------GEVLPTIFPAGSNNPMGLYAL 186

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR-----YHI 368
                     H T     F   +R  T GC+R+R   D+  +L K  P  ++       I
Sbjct: 187 YLGQNYAI--HGTNSN--FGIGLR-VTRGCIRLR-PKDI-EFLFKIVPVGTKVQFINEPI 239

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  ++T     +++   +
Sbjct: 240 KSTIETNGMQYLEVHNPL 257


>gi|167040080|ref|YP_001663065.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914163|ref|ZP_07131479.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X561]
 gi|307724601|ref|YP_003904352.1| SpoIID/LytB domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854320|gb|ABY92729.1| SpoIID/LytB domain [Thermoanaerobacter sp. X514]
 gi|300889098|gb|EFK84244.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X561]
 gi|307581662|gb|ADN55061.1| SpoIID/LytB domain protein [Thermoanaerobacter sp. X513]
          Length = 762

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 12/130 (9%)

Query: 47  IVNDRFDNFLARVDMGIDSDIPIISKETIAQT-EKAIA-FYQDILSRGG--------WPE 96
              D F        M +  D  ++         EKA+      I                
Sbjct: 55  NPTDYFGPATKNAVMRLQKDYNLVPDGIYGPLTEKALMDKLNAISKATTQTSNTSLQTQS 114

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              R L  G     V+ L+  L   G    +   +  F +    AV  FQ  + L P G+
Sbjct: 115 TVTRTLKYGMQGNDVKELQNALAKLGYF--NTTPTGYFGSITRDAVIKFQKANNLTPDGI 172

Query: 157 VDSSTLEAMN 166
           V   T +A++
Sbjct: 173 VGPLTQKAIS 182



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 31/98 (31%), Gaps = 2/98 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V+ L+  L   G    +   +  F +    AV  FQ  + L P G+V 
Sbjct: 216 TRTLKYGMQGNDVKELQNALAKLGYF--NTTPTGYFGSITRDAVIKFQKANNLTPDGIVG 273

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
             T + +   +  + +Q        K            
Sbjct: 274 PLTQKTIQGLLAGKDQQASQPTDSPKIQYPSGFSRNMK 311



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R +  G++   V+ L+  L   G       ++  +D    +AV  FQ  + L   G+  
Sbjct: 307 SRNMKKGDTGDDVKLLQTLLKEIGYYTKD--ITGTYDDNTLNAVMDFQKYYSLAVDGIAG 364

Query: 159 SSTLEAM 165
            +T+  +
Sbjct: 365 INTITKV 371



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 16/160 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +      F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANPTD-YFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN--- 210
            +A+                  LQ      + L     G     +    A L        
Sbjct: 88  EKALMDKLNAISKATTQTSNTSLQTQSTVTRTLKYGMQGNDVKELQNALAKLGYFNTTPT 147

Query: 211 ---GKVGLRSTVIVGRVDRQTPIL-HSRINRIMFNPYWVI 246
              G +   + +   + +  TP      + +   +    +
Sbjct: 148 GYFGSITRDAVIKFQKANNLTPDGIVGPLTQKAISEKLNV 187


>gi|226362884|ref|YP_002780664.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus opacus B4]
 gi|226241371|dbj|BAH51719.1| putative N-acetylmuramoyl-L-alanine amidase [Rhodococcus opacus B4]
          Length = 399

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 32/219 (14%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG--------------LSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLAGLGFLHNGVPGTRRESINGSHWIAPDAVFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           + GL   G+V  +T  +M      R+    +       L    +      +      +  
Sbjct: 64  QRGLLVDGIVGPATYRSMKE-ASYRLGARTLIYQLSAPLYGDDVATLQTRLQDLGFYVGR 122

Query: 208 VE--------NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM--- 256
           V+        N     +  + +       P     +  +        P ++ +++M+   
Sbjct: 123 VDGFFGPQTHNSLSSFQREIGIAADGICGPATLRSLELLGTRVTGGSPHAMSEEEMVRSS 182

Query: 257 ------ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
                   +  DP    D    ++      +   ++ W+
Sbjct: 183 GPQLSGKRIVIDPGLGGDTYGTIVRSPYGTISESDILWD 221


>gi|163758390|ref|ZP_02165478.1| putative signal peptide protein [Hoeflea phototrophica DFL-43]
 gi|162284679|gb|EDQ34962.1| putative signal peptide protein [Hoeflea phototrophica DFL-43]
          Length = 207

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 54/188 (28%), Gaps = 42/188 (22%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A       + ++ +    R K   +       ++V+     L  VE      R  V VGR
Sbjct: 15  AEPASAQTQSKKPKSKYWRKKVRFQTNEKPGTIIVDTNTKYLYYVEGNNRATRYGVGVGR 74

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
                     ++ R    P W  P ++I ++                             
Sbjct: 75  EG-FGWSGTVKVGRKAEWPSWRPPATMIARE----------------------------- 104

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                   +          G  N + +  +      R+  + +H T +P      +   +
Sbjct: 105 ------RRKGRILPAYMKGGPNNPLGARALYLYRGGRDTIFRIHGTNQPWTIGQNM---S 155

Query: 341 SGCVRVRN 348
           SGC+R+ N
Sbjct: 156 SGCIRMMN 163


>gi|146342536|ref|YP_001207584.1| putative ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
 gi|146195342|emb|CAL79367.1| conserved hypothetical protein; putative ErfK/YbiS/YcfS/YnhG
           precursor [Bradyrhizobium sp. ORS278]
          Length = 232

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 54/193 (27%), Gaps = 48/193 (24%)

Query: 159 SSTLEAMNVPVDLRIRQLQV--NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
            +T   +  P +      ++   L R       +     ++++ P   L  V      +R
Sbjct: 53  PATAPQVVNPQEDEAAPYELPARLRRQVVSYSTREAPGTIVIDTPNKYLYYVLGNGQAMR 112

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             + VGR D  T      I +    P W  P  +I +           YL  +       
Sbjct: 113 YGIGVGR-DGFTWSGVQSITKKAEWPDWTPPPEMIARQP---------YLPRH------- 155

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNV 335
                                     G  N + +  +        Y +H T  P      
Sbjct: 156 -----------------------MAGGPGNPLGARAMYL--GGTVYRIHGTNAPETIGT- 189

Query: 336 VRFETSGCVRVRN 348
               +SGC+R+ N
Sbjct: 190 --HVSSGCIRLTN 200


>gi|307945854|ref|ZP_07661190.1| putative bacteriophage-acquired protein [Roseibium sp. TrichSKD4]
 gi|307771727|gb|EFO30952.1| putative bacteriophage-acquired protein [Roseibium sp. TrichSKD4]
          Length = 407

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG+    V+RL+ RL     +     +   F    + AV  FQ  HGL P G+V 
Sbjct: 219 AASLRLGSEGEKVERLQLRLTNLNYVLR---VDGDFGPATKRAVVAFQADHGLKPDGIVG 275

Query: 159 SSTLEAM 165
             T +A+
Sbjct: 276 QQTQDAL 282


>gi|257876689|ref|ZP_05656342.1| carboxyl-terminal protease [Enterococcus casseliflavus EC20]
 gi|257810855|gb|EEV39675.1| carboxyl-terminal protease [Enterococcus casseliflavus EC20]
          Length = 476

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLEALGY----TTSGDTFNDETTAAVKAFQEDHDLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 ATGEVDADTAQAIEKEVAEKLK 460


>gi|300866027|ref|ZP_07110760.1| hypothetical protein OSCI_2560002 [Oscillatoria sp. PCC 6506]
 gi|300335971|emb|CBN55918.1| hypothetical protein OSCI_2560002 [Oscillatoria sp. PCC 6506]
          Length = 333

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G++   V+ L++RL   G        ++ + +  E AV+ FQ+  GL  +G+ D+ T
Sbjct: 58  IRPGSNGEQVRALQQRLQAQGYFPIGTTPTIYYRSITEEAVRQFQLARGLSATGIADNLT 117

Query: 162 LEAMNVPVDLRIRQ 175
           L  + +       Q
Sbjct: 118 LYYLGLGPYPTPTQ 131



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L   +   +V+ L+ +L           +   F    E AVK FQ R G+   G+   S
Sbjct: 247 TLGRNSRGPAVRELQNQLARL--RITPGAIDGVFGNDTEYAVKRFQQRMGIYADGIATPS 304

Query: 161 TLEAMN 166
              A+ 
Sbjct: 305 VQIALR 310



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V  L+++L   G       +   +     SAV  FQ  + L P+G  DS+TL A+++
Sbjct: 161 DKNVTFLQQKLKALGFF--YGAVDGKYRERTLSAVTRFQQANNLVPTGCADSTTLAAIDL 218

Query: 168 PVDL 171
            +  
Sbjct: 219 GIRE 222


>gi|289665442|ref|ZP_06487023.1| hypothetical protein XcampvN_20822 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 625

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 51/164 (31%), Gaps = 11/164 (6%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
            L +  S   + +  S LD  + E  H+     + +        +  +     +++ A T
Sbjct: 353 QLKISQSRGGEGVELSSLDSYL-ERKHAKGVKLYASDPLSEARDLLQERSQTKQQSHAAT 411

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFD 135
           E   +         G        L     +  V+ L++ L   G  D           + 
Sbjct: 412 EHKPSQAYAAADASG-------VLRENVRAADVRTLQQTLQQLGYKDAHGHELKPDGVYG 464

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
                 VK FQ  HGL   G+V   T  A+       +   + N
Sbjct: 465 QRTSETVKAFQRAHGLQDDGVVGRDTQAALRQAEKTPLLSEKTN 508


>gi|17230770|ref|NP_487318.1| hypothetical protein all3278 [Nostoc sp. PCC 7120]
 gi|17132373|dbj|BAB74977.1| all3278 [Nostoc sp. PCC 7120]
          Length = 272

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 55/214 (25%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
             + ++   + +  ++    ++R L       K   +     + V+V++           
Sbjct: 105 KKTQLLTPESRKNADLSDQSQLR-LSQPAAHKKTSNKLGNTKKEVVVDLSDRRTYVYAGD 163

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
            V     + +G+   +TP     ++ +  +P W                           
Sbjct: 164 IVIASYPIAIGKRGWETPTGTFNVSHMEHDPIWR-------------------------- 197

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTYMHDTPEP 329
                            +      F      G  + +    I F+S  RN    H TP+ 
Sbjct: 198 -----------------HPITGKIFP----AGVDSPLGERWIGFWSDGRNKIGFHGTPDT 236

Query: 330 ILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            L        + GC+R+RN  +  L   +   TP
Sbjct: 237 HLLGT---AISHGCLRMRNSDVRLLYDQVELGTP 267


>gi|239832519|ref|ZP_04680848.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
 gi|239824786|gb|EEQ96354.1| peptidoglycan binding domain-containing protein [Ochrobactrum
           intermedium LMG 3301]
          Length = 299

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    SV  ++  L  +G    S  +   F A  E AV+ FQ  H L   G+V   T
Sbjct: 229 LRRGMRGPSVANVQRALRAAGFYHMS--IDGVFGAGTEQAVRSFQREHRLVSDGLVGRKT 286

Query: 162 LEAMNV 167
             A+  
Sbjct: 287 FAALER 292


>gi|186682010|ref|YP_001865206.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464462|gb|ACC80263.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 449

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L  G +  +V RL++RL   G L+ +      F      AV  FQ  + +  +
Sbjct: 107 PSGQYPVLSQGKTGAAVTRLQQRLRQLGYLNANAT--GTFGPMTRDAVIKFQRNYRIAAN 164

Query: 155 GMVDSSTLEA-MNVPVDLRIRQLQVNLMR 182
           G+V+  T  A +          L    +R
Sbjct: 165 GIVNRQTWNALLGSSPTQTRSSLSTQQVR 193



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 76/239 (31%), Gaps = 24/239 (10%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDR-FDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           L        +S+  + + E    +     F+         +  D  I  +         I
Sbjct: 176 LGSSPTQTRSSLSTQQVRELQGRLQQLGYFNTSPTGKIGPMTRDAVIKFQRNYRLPVNGI 235

Query: 83  AFYQDI-----LSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           A  Q +     +S GG    +     L LG+   +V  ++ERL   G    +      F 
Sbjct: 236 ANAQVLDAVRRVSTGGSITQQPSRDYLTLGDRGDNVALVQERLSQLGF--SNTNPDGFFS 293

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN---------LMRIKKL 186
              +  V  FQ    L+ +G VD  T +A+ +         + N         L+ +   
Sbjct: 294 DSTKETVIAFQQYSRLNVTGNVDWQTWQALGLDSSTGGNYTEANGSVLPETRYLVPVNTG 353

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLR--STVIVGRVDRQTPILHSRINRIMFNPY 243
                  RYVL    A ++       +       VIV   +  T    S++ + + N  
Sbjct: 354 YATPENNRYVLPPATAYAVPGTNGNTLVASNPYRVIVPISNNDTL---SKVQQYIPNAV 409



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 12/141 (8%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILS 90
           +        +      +    + N  A          P+     I            I++
Sbjct: 114 LSQGKTGAAVTRLQQRLRQLGYLNANATGT-----FGPMTRDAVIKFQRNYRIAANGIVN 168

Query: 91  RGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           R  W  L    P +      S+  V+ L+ RL   G  + S             AV  FQ
Sbjct: 169 RQTWNALLGSSPTQT-RSSLSTQQVRELQGRLQQLGYFNTSPT--GKIGPMTRDAVIKFQ 225

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
             + L  +G+ ++  L+A+  
Sbjct: 226 RNYRLPVNGIANAQVLDAVRR 246



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 96  ELPIRPL---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +  + L    +G++   V   +  L   G    +  +S  F +  ++AV  FQ  + + 
Sbjct: 14  SIAGQSLALQKIGSNGSEVTSSQRCLKKLGYF--NGPVSGKFASLTQNAVIKFQQANRIP 71

Query: 153 PSGMVDSSTLEAMNV 167
             G+V  +T +A+  
Sbjct: 72  ADGVVGINTQQALQR 86


>gi|91977890|ref|YP_570549.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91684346|gb|ABE40648.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 232

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 50/191 (26%), Gaps = 46/191 (24%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
                      D    +L   L R             ++++ P   L  V  G   +R  
Sbjct: 54  PQVQALPQRDEDAAPAELPARLKRQTVSYATHEAPGTIIIDTPNTHLYYVLGGGRAIRYG 113

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           + VGR D  T      I +    P W  P  +I +           YL  +         
Sbjct: 114 IGVGR-DGFTWSGTQSITKKAEWPDWTPPPEMIARQP---------YLPRH--------- 154

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVR 337
                                   G  N + +  +        Y +H T  P        
Sbjct: 155 ---------------------MAGGPGNPLGARAMYL--GGTIYRIHGTNAPSTIGT--- 188

Query: 338 FETSGCVRVRN 348
             +SGC+R+ N
Sbjct: 189 HVSSGCIRLTN 199


>gi|282555162|gb|ADA82679.1| L,D-transpeptidase [Candidatus Blochmannia vicinus]
          Length = 311

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 64/208 (30%), Gaps = 49/208 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L    +N    +   + +G +   TP    + I     NP 
Sbjct: 91  LILPNTPHLGIIINSAEMRLFYYPKNSNTVVILPIAIGTIKNATPYYWITSIKHKKKNPV 150

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W +P   ++ + +                    +G E+                     G
Sbjct: 151 W-VPTKNMRDEYI--------------------RGGEILPTMF--------------PAG 175

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +          H T     F   +R  T GC+R+R   D+  +L K  P  
Sbjct: 176 SNNPMGLYALYLGRNYAI--HGTNS--NFGIGLR-VTRGCIRLR-PQDI-EFLFKAVPVG 228

Query: 364 SR-----YHIEEVVKTRKTTPVKLATEV 386
           +R       I+  V++     +++   +
Sbjct: 229 TRVQFINEPIKSTVESNGMQYLEIHNPL 256


>gi|27381747|ref|NP_773276.1| ATP synthase subunit [Bradyrhizobium japonicum USDA 110]
 gi|27354916|dbj|BAC51901.1| ATP synthase subunit [Bradyrhizobium japonicum USDA 110]
          Length = 262

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 49/186 (26%), Gaps = 46/186 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                 D    ++     R       +     ++++ P   L  V      +R  + VGR
Sbjct: 89  QSAPSEDQDAVEMPARFRRQTVSYATREAPGTIIIDTPNTYLYYVLGNGQAVRYGIGVGR 148

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D  T      + +    P W  P  +I +           YL  +              
Sbjct: 149 -DGFTWSGVQSVTKKAEWPDWTPPPEMIARQP---------YLPRH-------------- 184

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSG 342
                              G  N + +  +        Y +H T  P          +SG
Sbjct: 185 ----------------MAGGPGNPLGARAMYL--GGTIYRIHGTNAPDTIGK---HVSSG 223

Query: 343 CVRVRN 348
           C+R+ N
Sbjct: 224 CIRLTN 229


>gi|302390029|ref|YP_003825850.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302200657|gb|ADL08227.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 78

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G     V  L+ +L   G       +   F    E AV+  Q  + +   G+V 
Sbjct: 9   SRTLRRGMRGKDVAELQTKLQALGYYM--GPIDGIFGRLTEMAVRRLQRDNNIRVDGIVG 66

Query: 159 SSTLE 163
             T  
Sbjct: 67  PQTYA 71


>gi|22034314|gb|AAL01556.1| ErfK [Escherichia fergusonii]
          Length = 299

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 46/172 (26%), Gaps = 44/172 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN     L     G        + +G+  R+TP    + + R    P W    +  + 
Sbjct: 98  IIVNAAEMRLYYYPPGSNTVEVLPIGIGQAGRETPRNWVTAVERKQEGPTWSPTPNTRRA 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + E          G  N M    I
Sbjct: 158 -----------------------------------YAAEGKTLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
                     H T     F   +R  + GC+R+RN      +L  + P  +R
Sbjct: 183 YIGRLYAI--HGTNSN--FGIGLR-VSQGCIRLRNND--IKYLFDNVPVGTR 227


>gi|321315163|ref|YP_004207450.1| murein transglycosylase [Bacillus subtilis BSn5]
 gi|291483940|dbj|BAI85015.1| hypothetical protein BSNT_02352 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320021437|gb|ADV96423.1| murein transglycosylase [Bacillus subtilis BSn5]
          Length = 167

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             +     +    + +  P L + +   + +  P    P +I     +++  +      +
Sbjct: 16  NSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLFLN 75

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P    +I  +         +  +    ++   +H T  
Sbjct: 76  NRVM----KTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQH-YGIHGTNN 130

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           P          + GC+R+ N  +I+L   +   T
Sbjct: 131 PASIGK---AVSKGCIRMHNKDVIELASIVPNGT 161


>gi|253682264|ref|ZP_04863061.1| autolytic lysozyme (1,4-beta-N-acetylmuramidase)(Autolysin)
           [Clostridium botulinum D str. 1873]
 gi|253561976|gb|EES91428.1| autolytic lysozyme (1,4-beta-N-acetylmuramidase)(Autolysin)
           [Clostridium botulinum D str. 1873]
          Length = 322

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++RL+  G      GL   F    E AVK FQ   GL   G+V   T 
Sbjct: 257 RRGAKGNITKIIQQRLLNKGYSLGVYGLDGVFGTKTEMAVKRFQKDCGLKIDGIVGRETW 316

Query: 163 EAM 165
           +A+
Sbjct: 317 KAL 319


>gi|309702285|emb|CBJ01603.1| putative exported protein [Escherichia coli ETEC H10407]
          Length = 310

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 47/168 (27%), Gaps = 44/168 (26%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     +        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 98  IVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 158 -----------------------------------YAKRGESLPAFVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     H T     F   +R  + GC+R+RN  D   +L  + P
Sbjct: 183 YIGRLYAI--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDNVP 223


>gi|91975851|ref|YP_568510.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91682307|gb|ABE38609.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 250

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 50/182 (27%), Gaps = 45/182 (24%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            QL   L R     +       ++++     L  V  G   +R  V VGR    T     
Sbjct: 74  AQLADRLRRQVVAYDGNQPAGTIVIDTANTYLYYVLGGGRAIRYGVGVGREG-FTWAGTQ 132

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I R    P W  P  +I +                                        
Sbjct: 133 TITRKAEWPDWHPPAQMIARQ--------------------------------------- 153

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           P        G  N + +  +   S     +H T +P        + +SGC+R+ N  D+ 
Sbjct: 154 PYLPRFMAGGPGNPLGARAMYLGSTQ-YRIHGTNDPSTIGK---YVSSGCIRLTN-EDVA 208

Query: 354 VW 355
             
Sbjct: 209 DL 210


>gi|267994063|gb|ACY88948.1| hypothetical protein STM14_2503 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|332988950|gb|AEF07933.1| hypothetical protein STMUK_2045 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 309

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNVN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|255019748|ref|ZP_05291825.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
 gi|254970816|gb|EET28301.1| ErfK/YbiS/YcfS/YnhG family protein [Acidithiobacillus caldus ATCC
           51756]
          Length = 358

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 54/169 (31%), Gaps = 41/169 (24%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           ++V+IPA  L     +  V     V V     +  +  + I +    P W +P++I    
Sbjct: 98  IVVDIPARRLYYFPADRHVVFTYPVGVFLPGWKESLTTTSIIQKFKMPAWNVPKNIHA-- 155

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                   ++ F  ++ W             PG  N M    +E
Sbjct: 156 ----------------------WFEKKFHMDIPWYW----------PPGAENPMGELAME 183

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                  ++H T  P      +R  + GC ++   NI  L   +   TP
Sbjct: 184 TGLS-GIFIHGTYHPW--GVGMRA-SQGCFQMYPENIAQLFPMVPVGTP 228


>gi|146338180|ref|YP_001203228.1| putative ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
 gi|146190986|emb|CAL74991.1| conserved hypothetical protein, putative ErfK/YbiS/YcfS/YnhG
           precursor [Bradyrhizobium sp. ORS278]
          Length = 211

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 6/64 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 +  R   G  N + +  I     +++  Y +H T +P          +SGC+R+
Sbjct: 116 QARLGPYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQ---AISSGCIRM 172

Query: 347 RNII 350
            NI 
Sbjct: 173 TNID 176


>gi|159184414|ref|NP_353692.2| hypothetical protein Atu0669 [Agrobacterium tumefaciens str. C58]
 gi|159139727|gb|AAK86477.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 258

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 59/211 (27%), Gaps = 47/211 (22%)

Query: 145 FQMRH----GLDPSGMVDSS---TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           FQ R         SG+          A   P      Q+    +      +       ++
Sbjct: 69  FQQRQVAMPQRPSSGVTSQRPARVQNAAVRPNAPMRTQIAPQFLPQIVSYQTAEKPGTIV 128

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           ++ P   L  V       R  V VG+   +      ++ R    P W  P+ +I ++   
Sbjct: 129 IDTPNRFLYLVLADGKARRYGVGVGKPGFE-WAGTHKVTRKAEWPSWTPPKEMISRE--- 184

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                                           + +        + G  N M +  +    
Sbjct: 185 --------------------------------ATKGHYLPAFMEGGPANPMGARAMYLG- 211

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                +H T +P    +     +SGC+R+RN
Sbjct: 212 STLYRIHGTNQPWTIGSNN---SSGCIRMRN 239


>gi|51892856|ref|YP_075547.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
 gi|51856545|dbj|BAD40703.1| polysaccharide deacetylase [Symbiobacterium thermophilum IAM 14863]
          Length = 328

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + +R L  G++  +V  L+  L  +G       +   F    E+AV   Q  +GL   G
Sbjct: 33  AVSVRALRFGDAGPAVAELQRLLAANGF--DPGPVDGIFGPLTEAAVLAAQRHYGLTVDG 90

Query: 156 MVDSSTLEAMNVPVDLRIR 174
           +    T+ A+       + 
Sbjct: 91  LAGRMTVGALQSRPQAPVT 109


>gi|13475763|ref|NP_107330.1| hypothetical protein mll6923 [Mesorhizobium loti MAFF303099]
 gi|14026519|dbj|BAB53116.1| mll6923 [Mesorhizobium loti MAFF303099]
          Length = 243

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 42/188 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            A+  P    + + Q+N + +      +       ++++     L  VE      R  V 
Sbjct: 77  AAVQAPAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKARRYGVG 136

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            G+   +      +I      P W  P  +I+++  A  R  P YL              
Sbjct: 137 TGKPGFE-WSGTHKITNKREWPDWRPPAQMIKRE-AAKGRYLPTYLA------------- 181

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                                 G  N + +  +   +     +H T +P          +
Sbjct: 182 ---------------------GGIENPLGARALYLGTTE-YRIHGTNQPWTIG---GAVS 216

Query: 341 SGCVRVRN 348
           SGC+R+RN
Sbjct: 217 SGCIRMRN 224


>gi|312143852|ref|YP_003995298.1| Peptidase M23 [Halanaerobium sp. 'sapolanicus']
 gi|311904503|gb|ADQ14944.1| Peptidase M23 [Halanaerobium sp. 'sapolanicus']
          Length = 410

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 3/75 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L L N    V  +++ L   G           F    E AVK FQ  +GL   G+V 
Sbjct: 26  AYNLRLNNRGSEVVEVQKYLTELGY---DISSDGIFGRATEEAVKDFQSSNGLSVDGIVG 82

Query: 159 SSTLEAMNVPVDLRI 173
             T + +      ++
Sbjct: 83  RETYQKLKNSFVEKV 97


>gi|257440593|ref|ZP_05616348.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257196916|gb|EEU95200.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 159

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
              G     P   +  G S  +++ ++++L   G      G    F +   +AV+ FQ R
Sbjct: 82  AKHGLAVPYPGIVMRTGMSGGTIRLIQQKLNTLG---EKIGTDGKFGSRTAAAVQRFQRR 138

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL+  G V  +T E +
Sbjct: 139 NGLNADGAVGKATWEKL 155



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  G+       ++  L    D     P+      F    E+AVK FQ+R+ ++  G V 
Sbjct: 10  IQKGSYGPDEALVQTWLNGVRDQCSYYPALTTDGRFGTKSENAVKEFQLRNNMNMDGKVG 69

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 70  ANTWNVL 76


>gi|119490226|ref|ZP_01622739.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase [Lyngbya
           sp. PCC 8106]
 gi|119454112|gb|EAW35265.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase [Lyngbya
           sp. PCC 8106]
          Length = 367

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 92  GGWPELP-IRPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W   P  R L L         V +++  L   G L      +  FD   + A+K FQ 
Sbjct: 288 GIWCHFPVPRVLRLKQKFIEGSDVIQVQTALKKLGYL---VDQNGVFDKKTDDAIKQFQQ 344

Query: 148 RHGLDPSGMVDSSTLEAMNVPVD 170
              L   G+V  +T   + V   
Sbjct: 345 EKNLTVDGVVGPATWAKLLVSFA 367


>gi|291533118|emb|CBL06231.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Megamonas hypermegale ART12/1]
          Length = 204

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
                 LG+    +  ++  L   G           F    ++AV  FQ  +GLD  G+V
Sbjct: 6   SASSFRLGDQGAEIAEIQAALASQGY---DVTADGDFGPATQAAVAAFQSANGLDNDGLV 62

Query: 158 DSSTLE 163
            + T +
Sbjct: 63  GAMTYQ 68


>gi|254410280|ref|ZP_05024060.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
 gi|196183316|gb|EDX78300.1| Bacterial SH3 domain family [Microcoleus chthonoplastes PCC 7420]
          Length = 337

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             GG        L  G++  +V  L+ RL   G    +  ++  +    E+AV+  Q   
Sbjct: 122 ENGGSTVPSSAVLRPGSTGTAVTNLQNRLQEVGVY--NGPVTGYYGRLTEAAVRTVQASE 179

Query: 150 GLDPSGMVDSSTLEAM 165
           GL P G+  S+TL A+
Sbjct: 180 GLTPDGIAGSTTLTAL 195


>gi|218508835|ref|ZP_03506713.1| putative peptidoglycan binding protein (involved in cell wall
           degradation) [Rhizobium etli Brasil 5]
          Length = 62

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/45 (62%), Positives = 35/45 (77%)

Query: 370 EVVKTRKTTPVKLATEVPVHFVYISAWSPKDSIIQFRDDIYGLDN 414
           +V+ T   TP+KLATEVPV++VYISAW   D I+QFRDDIY +D 
Sbjct: 1   QVIATGVNTPIKLATEVPVYYVYISAWGMPDGIVQFRDDIYQMDG 45


>gi|239944015|ref|ZP_04695952.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239990470|ref|ZP_04711134.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
 gi|291447483|ref|ZP_06586873.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
 gi|291350430|gb|EFE77334.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces roseosporus NRRL
           15998]
          Length = 259

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 38/110 (34%), Gaps = 15/110 (13%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
                  S  P     ++     A   Y        W       L  G+S  +V++L+ R
Sbjct: 23  TTASASQSPAPETGSASVGAARAADGCY-------TW----SGTLREGSSGEAVRQLQIR 71

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++G         +  AF    ++AV  FQ  +GL   G+   +T   +
Sbjct: 72  --VAGYPGTGNQIAIDGAFGPATKAAVTRFQAAYGLAADGIAGPATFNKI 119


>gi|121535627|ref|ZP_01667433.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305797|gb|EAX46733.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
          Length = 193

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L++ L   G       +   F      AV  FQ  +GL   G+V   T
Sbjct: 30  LRQGDRGEDVRYLQKMLADKGYYA--GAIDGIFGGATMRAVLEFQRDNGLVADGIVGKDT 87

Query: 162 LEAMNVPVDLRIR 174
           L  +        R
Sbjct: 88  LRYLERAAVEPSR 100


>gi|111020641|ref|YP_703613.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus jostii RHA1]
 gi|110820171|gb|ABG95455.1| probable N-acetylmuramoyl-L-alanine amidase [Rhodococcus jostii
           RHA1]
          Length = 399

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 32/219 (14%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL--------------SVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLAGLGFLHNGVADTRREGTNGSHWIAPDAVFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           + GL   G+V  +T  +M      R+    +       L    +      +      +  
Sbjct: 64  QRGLLVDGIVGPATYRSMKE-ASYRLGARTLIYQLSAPLYGDDVATLQTRLQDLGFYVGR 122

Query: 208 VE--------NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM--- 256
           V+        +     +  + +       P     +  +        P ++ +++M+   
Sbjct: 123 VDGFFGPQTHDSLSSFQREIGIAADGICGPATLRSLELLGTRVTGGSPHAMSEEEMVRSS 182

Query: 257 ------ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
                   +  DP    D    ++      +   ++ W+
Sbjct: 183 GPQLSGKRIVIDPGLGGDTYGTIVRSAYGTISESDILWD 221


>gi|80159841|ref|YP_398585.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
           c-st]
 gi|78675431|dbj|BAE47853.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium phage
           c-st]
          Length = 309

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  +GL   G+V
Sbjct: 173 SSGLLKVGSREDKVKQLQANLNKLGYTCGNA--DGIFGQGTKNAVISFQRNNGLSADGVV 230

Query: 158 DSSTLEAMNVPVDLR 172
             ST   +   +++R
Sbjct: 231 GESTWNKILSNLEVR 245


>gi|254501060|ref|ZP_05113211.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
 gi|222437131|gb|EEE43810.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
          Length = 159

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 55/196 (28%), Gaps = 47/196 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           V   +   +     +      +     +++      L  V NG+  +R  V VG+  + +
Sbjct: 3   VAAALTLEKAQAAEVVGFSGHQFRPGTIVIKNSERRLYLVLNGRQAIRYKVAVGKRQK-S 61

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I      P W     + +                                    
Sbjct: 62  WTGQAQITAKYIKPDWSPSPEVRR------------------------------------ 85

Query: 289 NSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
              + P+       G   N M    +   + N   +H T  P       R  + GC+R+ 
Sbjct: 86  ---DFPHLPTVIRGGAPNNPMGVAAMTLSNGN-YAIHGTNRPGSIG---RAVSYGCIRMA 138

Query: 348 N--IIDLDVWLLKDTP 361
           N  I DL   +   TP
Sbjct: 139 NHDIQDLFRRVQVRTP 154


>gi|261407913|ref|YP_003244154.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|329922217|ref|ZP_08277934.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
 gi|261284376|gb|ACX66347.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|328942330|gb|EGG38599.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
          Length = 270

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G++   V  L+ RL   G       +   F +  + AVK FQ   G+   
Sbjct: 39  PTFSQQTIKFGSTGEDVYELQGRLKYLGFYH--GKIDSVFGSKTQGAVKWFQSEFGMKVD 96

Query: 155 GMVDSS 160
           G+V   
Sbjct: 97  GIVGPK 102


>gi|262043185|ref|ZP_06016321.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039463|gb|EEW40598.1| ErfK/YbiS/YcfS/YnhG family protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 321

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 46/163 (28%), Gaps = 42/163 (25%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVD--RQTPILHSRINRIMFNPYWVI 246
                 +++N+    L     GK       + +G++     TP + + ++    NP W  
Sbjct: 98  DAPREGLVINLAELRLYYYPPGKNEVTIYPIGIGQLGGTTITPTMVTTVSDKRANPTWTP 157

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +I  +                                                 G  N
Sbjct: 158 TANIRAR-----------------------------------YKAMGIELPAVVPAGPDN 182

Query: 307 AMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            M    I   +    Y +H T     F   +R  +SGC+R+R+
Sbjct: 183 PMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD 222


>gi|256381064|ref|YP_003104724.1| cell wall hydrolase/autolysin [Actinosynnema mirum DSM 43827]
 gi|255925367|gb|ACU40878.1| cell wall hydrolase/autolysin [Actinosynnema mirum DSM 43827]
          Length = 379

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  +R  L   G L      S  FD  VE AV+ FQ + GL   G+V  +T
Sbjct: 4   LRRGDVGQDVAEVRATLTKLGLLT-DPHASRVFDLSVEHAVRTFQQQRGLITDGLVGPAT 62

Query: 162 LEAMN 166
             A+ 
Sbjct: 63  YRALR 67



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 38/99 (38%), Gaps = 10/99 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++   T      A   Y+  L       L  +P+    +   V  L+ERL+  G    + 
Sbjct: 57  LVGPATYRALRDA--NYR--LGDRPLAFLIAQPV----TGDDVLTLQERLLELGY--DAG 106

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +  F    E A++ FQ  +GL   GM    T+ A+  
Sbjct: 107 RANGEFGQQTEQALRSFQSDYGLVVDGMCGPDTVRALRQ 145


>gi|62180593|ref|YP_217010.1| hypothetical protein SC2023 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62128226|gb|AAX65929.1| putative periplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322715065|gb|EFZ06636.1| ErfK/YbiS/YcfS/YnhG [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 309

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAI--HGTNTN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGARVQI 230


>gi|325497248|gb|EGC95107.1| hypothetical protein ECD227_1345 [Escherichia fergusonii ECD227]
          Length = 274

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     + +      + +G+  R+TP    + + R    P W    +  ++
Sbjct: 65  MVVNVAEMRLYYYPPDSQTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE 124

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +    +       G  N M    I
Sbjct: 125 -----------------------------------YAKRGESLPAFIPAGPENPMGLYAI 149

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                     H T     F   +R  + GC+R+R+      +L  + P  +R  I
Sbjct: 150 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRDND--IKYLFDNVPVGTRVQI 197


>gi|159897497|ref|YP_001543744.1| stage II sporulation D domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159890536|gb|ABX03616.1| Stage II sporulation D domain protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 462

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 92  GGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           G  P LP    L  G+S   V+  +  L   G    S     AF A  E AV+ FQ  +G
Sbjct: 329 GTTPSLPAWPSLRNGSSGNDVKAAQYLLRSHGY---SLTADGAFGAGTEQAVRSFQSANG 385

Query: 151 LDPSGMVDSSTLEAMNVPVD 170
           L   G++   T   +   V 
Sbjct: 386 LTADGIIGPQTYAKLIKTVQ 405



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 21/137 (15%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ------TEKAIAFYQ---DILSRG 92
                      +             +        A       TE+A+  +Q    + + G
Sbjct: 331 TPSLPAWPSLRNGSSGNDVKAAQYLLRSHGYSLTADGAFGAGTEQAVRSFQSANGLTADG 390

Query: 93  G-WPELPIRPLHL---GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
              P+   + +     G+S  +V+ ++  L ++        +  AF A  E AV   Q  
Sbjct: 391 IIGPQTYAKLIKTVQNGSSGDAVRAIQTLLGVT--------VDGAFGAGTEQAVLNLQAT 442

Query: 149 HGLDPSGMVDSSTLEAM 165
           + L   G+V   T +A 
Sbjct: 443 YDLTRDGIVGPVTWQAA 459


>gi|256043103|ref|ZP_05446047.1| hypothetical protein Bmelb1R_01397 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265989537|ref|ZP_06102094.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263000206|gb|EEZ12896.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 140

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 9   IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 66

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 67  ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 92

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 93  G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 121


>gi|21229926|ref|NP_635843.1| lytic enzyme [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|188989879|ref|YP_001901889.1| putative lytic enzyme [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21111435|gb|AAM39767.1| lytic enzyme [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|167731639|emb|CAP49817.1| putative lytic enzyme [Xanthomonas campestris pv. campestris]
          Length = 576

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 95  PELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRH 149
           P  P     L  G  S  V +L++ L   G  D           F      AV  FQ +H
Sbjct: 371 PSAPAGNGTLRHGEQSGDVGKLQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVIAFQKQH 430

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           GL P G+V  +T  A++        Q
Sbjct: 431 GLQPDGVVGRNTQAALSTQPAQTQSQ 456


>gi|296329732|ref|ZP_06872217.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674129|ref|YP_003865801.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153230|gb|EFG94094.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412373|gb|ADM37492.1| murein transglycosylase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 167

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 51/148 (34%), Gaps = 12/148 (8%)

Query: 217 STVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
             V    + +  P L + +   + +  P    P +I     +++  +    L  NN  + 
Sbjct: 22  FRVSTAALIQANPSLQTGVIAGQRIVIPGLPDPNTIPYHIAVSIGAKTLT-LYQNNQVIK 80

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
                 + V ++   +P    +I  +         +  +    ++   +H T  P     
Sbjct: 81  TY---PIAVGKILTQTPIGEFYIINRQRNPGGPFGAYWLSLSRQH-YGIHGTNNPSSIGK 136

Query: 335 VVRFETSGCVRVRN--IIDLDVWLLKDT 360
                + GCVR+ N  +I+L   +   T
Sbjct: 137 ---AVSKGCVRMHNKDVIELASIVPNGT 161


>gi|256392367|ref|YP_003113931.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Catenulispora acidiphila DSM 44928]
 gi|256358593|gb|ACU72090.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Catenulispora acidiphila DSM 44928]
          Length = 375

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 4/114 (3%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVS 110
             +        G+     + + + +     AI      ++   W  L   P+  G+S  +
Sbjct: 255 LLNQGYTVPTSGVFDATTVAAVQDLQGAIGAIVASDGTVTDPTWEAL-GVPIRQGDSGNA 313

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           VQ L+  LI  G    +   S  FD     AV+  Q  HGL+P+G VD+ T  A
Sbjct: 314 VQALQYILINKG---AALTQSGDFDHDTHKAVQDMQRLHGLEPTGKVDTETWCA 364



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 16/105 (15%)

Query: 73  ETIAQTEKAIAFYQDILSR----GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
                  +A+A    I         WP++        N+   V+ ++  L+  G    + 
Sbjct: 213 REFPTLRRAVAH--GIGQHTFPDRTWPDIYDS-----NAGPVVRVVQWLLLNQGY---TV 262

Query: 129 GLSVAFDAYVESAVKLFQMRHG--LDPSGMVDSSTLEAMNVPVDL 171
             S  FDA   +AV+  Q   G  +   G V   T EA+ VP+  
Sbjct: 263 PTSGVFDATTVAAVQDLQGAIGAIVASDGTVTDPTWEALGVPIRQ 307


>gi|298244218|ref|ZP_06968024.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551699|gb|EFH85564.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 372

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+++  W  L    +  G+SS +V  ++  L   G    S  ++  + +   SAVK +Q
Sbjct: 292 GIVAQQTWEALIT-TVTPGSSSAAVSAVQNLLSARGY---SVSVTGYYGSATASAVKSYQ 347

Query: 147 MRHGLDPSGMVDSSTLEAM 165
              GL   G V+  T  A+
Sbjct: 348 SSRGLTADGTVEKGTWCAL 366



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 15/116 (12%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +P +     ++  K +  Y        WP L  R      S  +V+ ++  L + G    
Sbjct: 219 LPALRHAVASRLNKPLPAY-------TWPTLKSRT-----SGNNVRTIQRLLQVRGY--- 263

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           S  +   F     S+++ FQ   GL  +G+V   T EA+   V        V+ ++
Sbjct: 264 SVAVDGTFGPSTVSSIQSFQSTKGLSVNGIVAQQTWEALITTVTPGSSSAAVSAVQ 319


>gi|290957976|ref|YP_003489158.1| peptidoglycan binding protein [Streptomyces scabiei 87.22]
 gi|260647502|emb|CBG70607.1| putative peptidoglycan binding protein [Streptomyces scabiei 87.22]
          Length = 311

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 50/154 (32%), Gaps = 5/154 (3%)

Query: 95  PELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P +    L   G+  + V+ L+ RL     L    G +  +D     AV  FQ + GL  
Sbjct: 98  PTVAPTVLWAQGDEGLDVRELQARLRQIAWL--FTGPTGTYDDLTVQAVSGFQGKRGLPR 155

Query: 154 SGMVDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +G  DS T   +        +                + +  R + ++  + +L  + +G
Sbjct: 156 TGKTDSVTWARLLSMTREPGKWDLYAYGGQPAASPDPRCLTGRALCISKTSRTLRWMVDG 215

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           +      V  G     T      +     + +  
Sbjct: 216 RTLTTVEVRFGSAYTPTREGLFHVYFKSRDHWST 249


>gi|322382702|ref|ZP_08056554.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153311|gb|EFX45747.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 114

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 9/84 (10%)

Query: 274 IDEKGKEVFVEEVD-----WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           + + G+ V    V        SP+    I  + P       +  +     +   +H T +
Sbjct: 19  LYDNGRVVRTYPVAVGKQVTQSPKGTYSIINKQPNPGGPFGAFWMGLSKLH-YGIHGTND 77

Query: 329 PILFNNVVRFETSGCVRVRNIIDL 352
           P          + GC+R+ N   L
Sbjct: 78  PSSIGK---AVSHGCIRMYNQDVL 98


>gi|119714782|ref|YP_921747.1| peptidoglycan binding domain-containing protein [Nocardioides sp.
           JS614]
 gi|119535443|gb|ABL80060.1| Peptidoglycan-binding domain 1 protein [Nocardioides sp. JS614]
          Length = 309

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 5/150 (3%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P L   P  L  G+    V+ L+ RL        +  ++  +     +AV+ FQ +  + 
Sbjct: 95  PTLVPGPRLLGPGDQGDEVRDLQARLKQI--YWFNTDVTGVYGDVTATAVRGFQAKREIP 152

Query: 153 PSGMVDSSTLEAMN-VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            +G VD  TL+ +  +       +L         L  +    R + ++  +++L  V +G
Sbjct: 153 VTGEVDQRTLDRLRAMTSTPTGAELHNRGNTPGALDARCRTGRVLCIDKTSSTLRWVVDG 212

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
            V     V  G     T      +     +
Sbjct: 213 TVRQTLDVRFGASTTPTREGVFHVYLKDAD 242


>gi|298292300|ref|YP_003694239.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296928811|gb|ADH89620.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 401

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 56/184 (30%), Gaps = 46/184 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           + P    ++ L  NL R +     K     ++++ P   L  V+ G   +R  + VGR  
Sbjct: 207 DQPETGPVKALPANLQRQEVDYVTKEPAGTIVIDTPNTYLYYVQGGGKAIRYGIGVGREG 266

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     RI+       W  P  +I++                                
Sbjct: 267 -FTWAGTERISAKKEWADWRPPAEMIERQ------------------------------- 294

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N + +  +        Y +H T +P      +   +SGC+
Sbjct: 295 --------PYLPRFMAGGPGNPLGARTMYL--GGTIYRIHGTNQPSTIGKFM---SSGCI 341

Query: 345 RVRN 348
           R+ N
Sbjct: 342 RMLN 345


>gi|300780168|ref|ZP_07090024.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium genitalium ATCC
           33030]
 gi|300534278|gb|EFK55337.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium genitalium ATCC
           33030]
          Length = 386

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGN 106
           F+  +   +    S   ++  + +AQT KA    + IL  G   E+ +R L      LG 
Sbjct: 24  FEGDVGEWNRRSFSQAEMLFDDELAQTLKAFQQSRGILPSGDIDEITLRELRHASYTLGA 83

Query: 107 S-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          V +L+++L   G       +   F     +A++ +Q+ +G+   G
Sbjct: 84  RVLSYQPSQIMVGDDVGQLQKQLQELGFYS--GRVDGHFGPDTHAALQDYQINYGIQDDG 141

Query: 156 MVDSSTLEAMN 166
           +    T+ A++
Sbjct: 142 ICGPETMHALS 152



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRHGLD 152
           G+SS  V  +R  L   G L   +G              + FD  +   +K FQ   G+ 
Sbjct: 2   GDSSARVAEVRSTLARLGLLPGFEGDVGEWNRRSFSQAEMLFDDELAQTLKAFQQSRGIL 61

Query: 153 PSGMVDSSTLEAMN 166
           PSG +D  TL  + 
Sbjct: 62  PSGDIDEITLRELR 75


>gi|226314511|ref|YP_002774407.1| hypothetical protein BBR47_49260 [Brevibacillus brevis NBRC 100599]
 gi|226097461|dbj|BAH45903.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 237

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 11/102 (10%)

Query: 268 DNNIHMIDEKGKEVFVEEV---DWNSPEPPNFIFRQDPGKI--NAMASTKIEFYSRNNTY 322
             +  ++ + GK +    V   + ++P P         GK    +     +        Y
Sbjct: 56  RKHKLIVKKHGKTIKTYPVAVGNPSTPTPVGEYKVIYKGKDWGPSFGPRWLGLNVPWGIY 115

Query: 323 -MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            +H T +P          + GC+R+RN  +I+L   +   T 
Sbjct: 116 GIHGTNKPYSIGQ---HLSHGCIRMRNNDVIELFKMIPLGTK 154



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    R L  G+    VQ ++ RL  +G           F +   +A+K FQ    L 
Sbjct: 163 GDPSHDPRDLAEGDVGGDVQLIQSRLKSAGYYH--GICDGKFRSSTTAALKKFQRDRKLK 220

Query: 153 PSGMVDSSTLEAMN 166
           P+G+V S   + + 
Sbjct: 221 PNGVVSSKIYQELG 234


>gi|218458849|ref|ZP_03498940.1| hypothetical protein RetlK5_05028 [Rhizobium etli Kim 5]
          Length = 183

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 17/180 (9%), Positives = 35/180 (19%), Gaps = 25/180 (13%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNI-PA-ASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +    +           ++   Y    + P+ A     E             +      
Sbjct: 5   PVVSYTITPADAAGPFVAEIPEDYSHKALLPSLAYTSTTEMLAERFHMDEAFLKEMNPGA 64

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP-QYLKDNNIHMID------------E 276
                   I            + + +    R+    Y    N+                 
Sbjct: 65  DFSVPGTVIKVVNPGEPKSGEVARIIADKGRKQVFAYDGAGNLIAAYPASIGSTDTPSPS 124

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQ---------DPGKINAMASTKIEFYSRNNTYMHDTP 327
               V     +      P   F+Q          PG    + +  +         +H TP
Sbjct: 125 GTVTVERVAFNPGYTYNPKINFQQGANDKILNIPPGPNGPVGTVWMALSKP-TYGIHGTP 183


>gi|170078936|ref|YP_001735575.1| peptidoglycan binding domain-containing protein [Synechococcus sp.
           PCC 7002]
 gi|169886605|gb|ACB00319.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7002]
          Length = 537

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 34/108 (31%), Gaps = 14/108 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE----- 163
             V  L+  L  +G L  S  +   F    E+AV+ FQ  + L  +G VD  T       
Sbjct: 76  DDVGYLQAFLQAAGFLPRSAVIDGIFGRTTEAAVRSFQRANKLPKTGTVDPRTWRTIERY 135

Query: 164 -----AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
                A     +    Q           L+Q    + +L       + 
Sbjct: 136 QQLFLASPATAEPPSEQAP----EPTSFLQQDRPEKLLLRRGAGFEIS 179



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 27/58 (46%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +V  L++ L     +  +  L   F    E+ VK FQ+R  L   G+V  ST EA+  
Sbjct: 184 AVYYLQKLLQRGLFIPETAKLDGKFGRQTENGVKFFQVRQKLVADGIVGLSTWEALEK 241



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +   F +  E AV+ FQM   L   G+V + T 
Sbjct: 306 PIDGHFGSQTEQAVRRFQMIAELTIDGVVGAQTW 339


>gi|312200969|ref|YP_004021030.1| cell wall hydrolase/autolysin [Frankia sp. EuI1c]
 gi|311232305|gb|ADP85160.1| cell wall hydrolase/autolysin [Frankia sp. EuI1c]
          Length = 371

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 36/112 (32%), Gaps = 18/112 (16%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQRLR 115
            E + +  +A    + +   G       R L      LG+               V  L+
Sbjct: 35  DEDLDRAVRAFQQSRGLSVDGIIGPDTARSLEEARHGLGDRLLYHAPSQPLIGDDVAALQ 94

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ERL   G           F    ESAV+ FQ   GL+P G     TL  +  
Sbjct: 95  ERLSNMGF--DVGRSDGIFGPRTESAVRDFQRNRGLEPDGRCGPHTLRELKR 144



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              +  FD  ++ AV+ FQ   GL   G++   T  ++ 
Sbjct: 28  ATRAEVFDEDLDRAVRAFQQSRGLSVDGIIGPDTARSLE 66


>gi|167465388|ref|ZP_02330477.1| YkuD [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 112

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 28/84 (33%), Gaps = 9/84 (10%)

Query: 274 IDEKGKEVFVEEVD-----WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           + + G+ V    V        SP+    I  + P       +  +     +   +H T +
Sbjct: 17  LYDNGRVVRTYPVAVGKQVTQSPKGTYSIINKQPNPGGPFGAFWMGLSKLH-YGIHGTND 75

Query: 329 PILFNNVVRFETSGCVRVRNIIDL 352
           P          + GC+R+ N   L
Sbjct: 76  PSSIGK---AVSHGCIRMYNQDVL 96


>gi|145223739|ref|YP_001134417.1| peptidoglycan binding domain-containing protein [Mycobacterium
           gilvum PYR-GCK]
 gi|315444065|ref|YP_004076944.1| negative regulator of beta-lactamase expression [Mycobacterium sp.
           Spyr1]
 gi|145216225|gb|ABP45629.1| Peptidoglycan-binding domain 1 protein [Mycobacterium gilvum
           PYR-GCK]
 gi|315262368|gb|ADT99109.1| negative regulator of beta-lactamase expression [Mycobacterium sp.
           Spyr1]
          Length = 288

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 15/83 (18%)

Query: 95  PELPIRP-----LHLGNSSVSVQRLRERL-----IISGDLDPSKGLSVAFDAYVESAVKL 144
           P +P+       L+ G+    V  L+ RL       +GDL     +   +    E+AV+ 
Sbjct: 199 PTVPVGEYAEVLLYRGSRGPQVAELQRRLKHAYAAYAGDL----RIDGVYGPDTEAAVRE 254

Query: 145 FQMR-HGLDPSGMVDSSTLEAMN 166
           FQ R  GL   G+V  +T  A+ 
Sbjct: 255 FQRRTAGLKVDGVVGPATAAALR 277


>gi|301066442|ref|YP_003788465.1| periplasmic protease [Lactobacillus casei str. Zhang]
 gi|300438849|gb|ADK18615.1| Periplasmic protease [Lactobacillus casei str. Zhang]
          Length = 461

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKDSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|225016832|ref|ZP_03706024.1| hypothetical protein CLOSTMETH_00744 [Clostridium methylpentosum
           DSM 5476]
 gi|224950406|gb|EEG31615.1| hypothetical protein CLOSTMETH_00744 [Clostridium methylpentosum
           DSM 5476]
          Length = 226

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            L ++   V  ++++L   G    +  +   +    +SAV  FQ + GL   G+   +TL
Sbjct: 39  RLWSTGNEVTAIQQKLKERGLYTGN--VDGIYGPNTQSAVIKFQKQQGLSADGIAGPATL 96

Query: 163 EAMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYV 196
           + + + +         N+  + + +  +  G  Y 
Sbjct: 97  KRLGITIGSTPSATTANVNLLARIISAEGRGESYT 131


>gi|78043998|ref|YP_360473.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996113|gb|ABB15012.1| prophage LambdaCh01, N-acetylmuramoyl-L-alanine amidase
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 231

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           + LG+    V  +++ L   G L     +   F A  E+AVK FQ    +   G+V   T
Sbjct: 3   IKLGDKGSQVIEVQKMLKQLGFLK--DKVDGVFGANTEAAVKSFQRTKQIAIDGIVGPVT 60

Query: 162 LEAMNVPVDLRIRQLQ 177
              +     L+   + 
Sbjct: 61  YNLLRKDFSLKTAAIT 76


>gi|325570956|ref|ZP_08146575.1| C-terminal processing peptidase [Enterococcus casseliflavus ATCC
           12755]
 gi|325156282|gb|EGC68466.1| C-terminal processing peptidase [Enterococcus casseliflavus ATCC
           12755]
          Length = 476

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 94  WPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           +P LP    L  G SS +V  L + L   G           F+    +AVK FQ  H L 
Sbjct: 383 FPPLPRDNALKAGQSSTAVNNLNQFLKALGY----ATSGDTFNDETTAAVKTFQEAHDLK 438

Query: 153 PSGMVDSSTLEAMNVPVDLRIR 174
            +G VD+ T +A+   V  +++
Sbjct: 439 VTGEVDADTAQAIEKEVTEKLK 460


>gi|258510344|ref|YP_003183778.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257477070|gb|ACV57389.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 792

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V  L+  L   G           FDA  E+ VK FQ   GL   G+V   T
Sbjct: 57  LSYGSTGAYVAILQNALNALGYDVGQAT--GVFDATTEAQVKAFQQAEGLGVDGIVGPMT 114

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQ 189
             A+   V    + + V L R   L++ 
Sbjct: 115 WGALAKAVADYRQVMTV-LTRPSSLVQH 141


>gi|302876319|ref|YP_003844952.1| Peptidase M15A [Clostridium cellulovorans 743B]
 gi|307687054|ref|ZP_07629500.1| Peptidase M15A [Clostridium cellulovorans 743B]
 gi|302579176|gb|ADL53188.1| Peptidase M15A [Clostridium cellulovorans 743B]
          Length = 220

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G++   V  L+++LI  G      G    F  Y   AVK  Q   G+   G+V 
Sbjct: 29  AAVLQSGSTGAEVTALQQKLIRLGFYLGPSGADGDFGQYTVDAVKGIQSASGITTDGIVG 88

Query: 159 SST 161
           S+T
Sbjct: 89  SAT 91


>gi|329938065|ref|ZP_08287516.1| lipoprotein [Streptomyces griseoaurantiacus M045]
 gi|329302554|gb|EGG46444.1| lipoprotein [Streptomyces griseoaurantiacus M045]
          Length = 293

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G+    V+ L+ RL     L      S  +D     AV  FQ + GL  +G 
Sbjct: 83  PARVLWSEGDHGRDVRELQARLKQVAWLFDGPTGS--YDDLTAKAVGGFQGKRGLPRTGR 140

Query: 157 VDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T + +        +                +    R + ++  + +L  + +G+  
Sbjct: 141 ADTVTWQRLLAMTHEPTKWELYAFGGQPAAPPDPRCTTGRVLCISKTSRTLRWMIDGRTV 200

Query: 215 LRSTVIVGRVDRQTPILHSRINRI 238
               V  G     T      +   
Sbjct: 201 SVMPVRFGTELTPTREGVFHVYWK 224


>gi|327198078|ref|YP_004306445.1| gp33 [Burkholderia phage KL3]
 gi|310657212|gb|ADP02326.1| gp33 [Burkholderia phage KL3]
          Length = 269

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G    +  +S  +D   E AVK  Q   G+   G+   +T
Sbjct: 4   LRFNDRGAEVGLLQQRLLRAGY---ALDVSHLYDEATEQAVKALQAAAGIVVDGLAGPNT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              ++     R    + ++ R
Sbjct: 61  YAVLSAGQRDRKHLTEADIAR 81


>gi|257438481|ref|ZP_05614236.1| spore cortex-lytic enzyme, pre-pro-form [Faecalibacterium
           prausnitzii A2-165]
 gi|257199060|gb|EEU97344.1| spore cortex-lytic enzyme, pre-pro-form [Faecalibacterium
           prausnitzii A2-165]
          Length = 866

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPS 127
           S + +A+           LS G W       L +G+S  +V++L+     L       PS
Sbjct: 396 SVKDLAELTSEGETAAGTLSDGTWG---GTILRVGSSGSAVEQLQFWLNTLAQYESSIPS 452

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +   + +    AV+ FQ R+GL   G+V  +T   +
Sbjct: 453 VAVDGVYGSGTAGAVRAFQRRYGLSVDGVVGRATWTEL 490



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + +   VK FQ +  L   
Sbjct: 320 PGSPLRRGDRGTAVFTLQRQLNRITKDYPFLGLLTVDGVFGSRMTETVKRFQKQFNLTAD 379

Query: 155 GMVDSSTLEAMN 166
           G+V   T   ++
Sbjct: 380 GVVGRQTWYKIS 391



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 84  FYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLR--ERLIISGDLDPSK-GLSVAFDAYVE 139
            ++ I S  G P   P   L  G+S  +V+ ++   ++  +   + +   +   F A   
Sbjct: 493 QFRSIQSDNGRPNAYPGTALRQGSSGQNVRLVQFWLKIARTVYPNLNTLTVDGKFGAGTA 552

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           +AV+ FQ   GL   G+V  +T   +  V  D+  R L  +L   +     + G     V
Sbjct: 553 AAVRRFQSYFGLTSDGVVGRTTWNKLYEVYNDIANRLLTASLRPGEYPGVLRRGSTGTAV 612

Query: 199 NIPAASLEAV 208
                 L  +
Sbjct: 613 RELQFYLYLM 622



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 14/187 (7%)

Query: 14  FFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE 73
           F++YL+     S+    I  S      N         RF        +G  +   +  K 
Sbjct: 617 FYLYLMSAYESSIPAVSIDGSFGAATENAVR---AYQRFAKLTVDGVVGRTTWNSLYGKA 673

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ---RLRERLIISGDLDPSKGL 130
           +I +    +   + +   G        PL +G +  +V     L +R+    D   S  L
Sbjct: 674 SILRVSGPVVTLKRLPYLGT-------PLAVGATGDAVLYYNLLLQRIAYYFDSVESPPL 726

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           S  +     ++ +  Q    L  +G+ D+ T  A+   + L++  +  N  R     +  
Sbjct: 727 SDRYTDETAASTRSAQALLDLPETGVADAETWTAVEA-LSLQLAAVSPNPDRDAGQADVY 785

Query: 191 MGLRYVL 197
            G     
Sbjct: 786 PGRAMKE 792



 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLFQMRHGLD 152
           P R +  G+    V ++ + L   G    + G         F       V+  Q R  L 
Sbjct: 786 PGRAMKEGSVGPDVGQIEQWLN--GRYMRNCGEDYVTENFLFGPKETEGVRAAQERADLL 843

Query: 153 PSGMVDSSTLEAMNV 167
            +G V+  T  A+  
Sbjct: 844 VTGTVNEETWAALRA 858


>gi|119488672|ref|ZP_01621681.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
 gi|119455095|gb|EAW36236.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
          Length = 364

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 14/151 (9%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT-EKAIAFYQDI--------LSRGG 93
                 +         +         + S     QT EKA+   Q I          +  
Sbjct: 52  LRRGNYSQNVVTLQKDLKQAYCFPGDLRSTGYYGQTTEKAVKQLQRIHALQVDGIAGKQT 111

Query: 94  WPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
              L       L   +    V++L+++L   G    +  +   F     +AV  FQ   G
Sbjct: 112 RSALEAYKTCFLKYRSQGEEVKKLQQQLNNWGF--SAGTVDGIFGRKTRAAVIRFQKYQG 169

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           L P G+V   T +A+  P     +     + 
Sbjct: 170 LKPDGIVGPKTTQALWKPRTQVSQTPTTTIE 200



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 27/73 (36%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +    L  GN S +V  L++ L  +         +  +    E AVK  Q  H L   
Sbjct: 45  PVITAEVLRRGNYSQNVVTLQKDLKQAYCFPGDLRSTGYYGQTTEKAVKQLQRIHALQVD 104

Query: 155 GMVDSSTLEAMNV 167
           G+    T  A+  
Sbjct: 105 GIAGKQTRSALEA 117


>gi|262204653|ref|YP_003275861.1| cell wall hydrolase/autolysin [Gordonia bronchialis DSM 43247]
 gi|262088000|gb|ACY23968.1| cell wall hydrolase/autolysin [Gordonia bronchialis DSM 43247]
          Length = 396

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 17/82 (20%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS-----------------VAFDAYVESAVKL 144
             LG+   +V  +R  L   G L                          FDA  + AV+ 
Sbjct: 4   FRLGDHGSAVAEIRSILAGRGLLSAPSSQPTGLTNGTRSADGWTAPEDIFDAETDHAVRA 63

Query: 145 FQMRHGLDPSGMVDSSTLEAMN 166
           FQ   GL   G+V  +T  A+ 
Sbjct: 64  FQQERGLIVDGIVGPATYRALR 85



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 19/127 (14%)

Query: 48  VNDRFDNFLARVDMGIDSDIP-----IISKETIAQTEKAIAFY--QDILSRGGWPELPIR 100
             D FD            +       I+   T     +A      + +  R   P +   
Sbjct: 49  PEDIFDAETDHAVRAFQQERGLIVDGIVGPATYRALREASYKLGTRVLAFRFSAPMV--- 105

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
                     V  L+ RL   G    +  +   F    ++AV+L+Q  +GL   G+   +
Sbjct: 106 -------GDDVATLQSRLQNLGYY--TSLVDGVFGESTDNAVRLYQSEYGLSSDGICGPA 156

Query: 161 TLEAMNV 167
           TL ++  
Sbjct: 157 TLRSLER 163


>gi|157692901|ref|YP_001487363.1| hypothetical protein BPUM_2134 [Bacillus pumilus SAFR-032]
 gi|157681659|gb|ABV62803.1| hypothetical protein BPUM_2134 [Bacillus pumilus SAFR-032]
          Length = 169

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 47/182 (25%), Gaps = 59/182 (32%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
               G  YV++N     L  ++ G++        G+    TP     I            
Sbjct: 22  NPLPGDPYVIINKQTNELAYIDQGQIQKIYPASTGKTTDLTPEGEFTIMIK--------- 72

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                        +DP Y +  NI                                K N 
Sbjct: 73  ------------AKDPYY-RKKNIE----------------------------GGAKNNP 91

Query: 308 MASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +    I F           +H T +         F T+GCVR+ N  +  L   L   T 
Sbjct: 92  LGRRWIGFDARGTDGRTYGIHGTSDETSIGK---FITAGCVRLHNQDVELLFDQLPVGTK 148

Query: 362 TW 363
            W
Sbjct: 149 VW 150


>gi|309389108|gb|ADO76988.1| cell wall hydrolase SleB [Halanaerobium praevalens DSM 2228]
          Length = 229

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+  + V  L++RL        S  +   +      AVK FQ   GL   G+     L+
Sbjct: 42  GDEGIDVAVLQQRLKKLNYYVGS--VDGIYGQATIEAVKKFQADKGLPVDGVFGQRALK 98


>gi|291447641|ref|ZP_06587031.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
           NRRL 15998]
 gi|291350588|gb|EFE77492.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces roseosporus
           NRRL 15998]
          Length = 245

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  ++G    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 39  TRTLKAGATGNDVTQLQVR--VAGYPGYNAVLAIDGSYGPATTAAVKRFQAAYGLAADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATQAKL 105


>gi|239944169|ref|ZP_04696106.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 15998]
 gi|239990625|ref|ZP_04711289.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           roseosporus NRRL 11379]
          Length = 223

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  ++G    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 17  TRTLKAGATGNDVTQLQVR--VAGYPGYNAVLAIDGSYGPATTAAVKRFQAAYGLAADGV 74

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 75  AGPATQAKL 83


>gi|111226207|ref|YP_717001.1| N-acetymuramyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111153739|emb|CAJ65497.1| N-acetymuramyl-L-alanine amidase [Frankia alni ACN14a]
          Length = 423

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 33/104 (31%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G       R L      LG+               V  L+ERL   G 
Sbjct: 95  RAFQQSRGLSVDGILGPNTARALEEARHNLGDRLLYFSAAHPFVGDDVAALQERLFNMGF 154

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     F    ESAV+ FQ   GLDP G     TL  +  
Sbjct: 155 --DIGRTDGIFGPRTESAVRDFQRNRGLDPDGRCGPRTLRELKR 196



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 53/118 (44%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS------------------------------ 131
           + LG+   +V  +R  L   G L  +   S                              
Sbjct: 1   MRLGDQDSAVAEVRAALTYLGFLPVTPRQSGERGEAAPAVARPGESKGVGLPAAAADPAA 60

Query: 132 -----------------------VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                                    FD  +++A++ FQ   GL   G++  +T  A+ 
Sbjct: 61  AVGVHSPAEEPAGGAGGAAPAPPDRFDRDLDNALRAFQQSRGLSVDGILGPNTARALE 118


>gi|325288682|ref|YP_004264863.1| NLP/P60 protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324964083|gb|ADY54862.1| NLP/P60 protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 222

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++  SV  L+ +L   G    +      F    ++AVK FQ    L P G+V   T
Sbjct: 30  LKMGSTGSSVVELQIKLSSLGY--SAGTADGIFGPKTQAAVKTFQSSTSLTPDGIVGPLT 87

Query: 162 LEAMNVPVDLRIRQLQVN 179
             A+N     ++R  + N
Sbjct: 88  QNALN-SAYAKVRTTEAN 104


>gi|302561223|ref|ZP_07313565.1| N-acetylmuramyl-L-alanine amidase [Streptomyces griseoflavus
           Tu4000]
 gi|302478841|gb|EFL41934.1| N-acetylmuramyl-L-alanine amidase [Streptomyces griseoflavus
           Tu4000]
          Length = 262

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 22/156 (14%)

Query: 21  PMGLSLVEKP-IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
             G+S    P +      E +      +    FD           S  P           
Sbjct: 116 TDGISFTSYPTLKRGATGEHVRALQTLLKAQSFDPGTVDG-----SFGPATESAV----- 165

Query: 80  KAIAFYQDILSRG-----GWPEL-PIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           KA    + +++ G      W  L        +  G++  +V+RL+  L  +  L  +  +
Sbjct: 166 KAFQASRKLVADGSVGPKTWTALLSAGQVVTVRGGSTGEAVKRLQRALTAA--LGRTVAV 223

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              F +  ESAV  +Q   GL   G+   +T  A+ 
Sbjct: 224 DGTFGSATESAVVSYQSSRGLTADGIAGPATWSALQ 259


>gi|239830893|ref|ZP_04679222.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
 gi|239823160|gb|EEQ94728.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
          Length = 266

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 105 PAIPYDKVPKQFRRQIVPDPTGQAPGTIVVSLKDHYLYYVLPGGEALRYGVGIGKAGFE- 163

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 164 WQGTANVQYKKQWPRWTPPPEMIQR----------------------------------- 188

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 189 -KPELEKYRNGQEPGPQNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 244

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 245 LMNQDIIDLYNRVQGKAP 262


>gi|225573657|ref|ZP_03782412.1| hypothetical protein RUMHYD_01851 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038950|gb|EEG49196.1| hypothetical protein RUMHYD_01851 [Blautia hydrogenotrophica DSM
           10507]
          Length = 330

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           ++P +  L  G+    V+ L+ +LI         G    F    E AV+ FQ  + L   
Sbjct: 177 QVPEKNFLSRGDQGEQVKNLQRQLISLSYSCGENGADGDFGKDTEKAVEAFQKEYNLTSD 236

Query: 155 GMVDSSTLEAMNV 167
           G     T++ +  
Sbjct: 237 GAAGPETMKKLER 249


>gi|167757364|ref|ZP_02429491.1| hypothetical protein CLORAM_02914 [Clostridium ramosum DSM 1402]
 gi|167703539|gb|EDS18118.1| hypothetical protein CLORAM_02914 [Clostridium ramosum DSM 1402]
          Length = 248

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
             +  S    + N S          +        + +  P  S+      +  +      
Sbjct: 115 NGVQVSTCANVSNGSKSRKWTKHGKSPYIDYGTTVSTPAPEPSQP----VDDWLNRLNAE 170

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           ++R G+   P   +  G      + ++ERL   G    +  +   F    + A+ +FQ  
Sbjct: 171 IARQGFSSYP--TVKKGAKGGITRLIQERLNSVGF---NLVVDGDFGKKTKEAIIVFQRN 225

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G+V S+T + +
Sbjct: 226 RGLVQDGVVGSNTWDWL 242


>gi|282896383|ref|ZP_06304404.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281198671|gb|EFA73551.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 252

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           + GWP      L LGN+   V +L+  L   G       L   F   +E AVK  Q+R+G
Sbjct: 177 QSGWPI-----LRLGNTGAEVTKLQRLLRSLGFFSS--PLDGKFSLTLERAVKAAQLRYG 229

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+  + T E    
Sbjct: 230 LTADGVAGAQTWEVFIQ 246



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 24/177 (13%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +I    G   +    L +G+   SV  L+  L + G       +   +      AV  F+
Sbjct: 19  EIAQVTGVGSINRPILKIGSQGESVSELQATLALLGFYS--GPVDGVYRDSTAKAVSQFK 76

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
              GL P G+VD+ T + +   V                       +     N P     
Sbjct: 77  QVVGLAPDGIVDTITWQKLFPSVPNIATT-----------TAPPPAISSTPRNKPENRQP 125

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
              NG+ G                  +   R +       P  I+      + +++P
Sbjct: 126 TTRNGREG---------NSNNNITGKTTQPRQVVTKPPTQP--IMVFKPTPVNQRNP 171


>gi|271969998|ref|YP_003344194.1| hypothetical protein Sros_8817 [Streptosporangium roseum DSM 43021]
 gi|270513173|gb|ACZ91451.1| hypothetical protein Sros_8817 [Streptosporangium roseum DSM 43021]
          Length = 276

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 18/141 (12%)

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            +   GG P  P    LH G+    V++++ RL   G    +      +   +  AV  F
Sbjct: 63  RVSGSGGVPARPQFPTLHPGDEGALVEKVQSRLDRLGF--KAGPPGSEYGPALRMAVWAF 120

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q  +GL     VD  T +A++ P  +R        +R++  L +++             L
Sbjct: 121 QKANGLPAVDRVDPPTWQALSHPERVRPLVPSGGSVRVEIDLRRQL-------------L 167

Query: 206 EAVENGKVGL--RSTVIVGRV 224
            A ++GK  L    +   G+ 
Sbjct: 168 TAWKDGKPALISHISTGTGKP 188



 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 9/66 (13%)

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR-FETSGCVRV--RNII 350
               +R        +       Y       H +        V R   + GC+RV   N  
Sbjct: 205 FRAWWRTAGWTTGPLGEQFYTVYFNGGIGFHGS------ERVPRHPASHGCIRVPLHNAR 258

Query: 351 DLDVWL 356
            L   +
Sbjct: 259 PLFDMI 264


>gi|86748516|ref|YP_485012.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86571544|gb|ABD06101.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 252

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 51/189 (26%), Gaps = 45/189 (23%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
            QL   L R             ++++     L  +  G   +R  V VGR    T     
Sbjct: 76  AQLSDRLRRQVVAYNINQPAGTIVIDTANTYLYYLLGGGRAIRYGVGVGREG-FTWAGTQ 134

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I R    P W  P  +I +                                        
Sbjct: 135 TITRKAEWPDWHPPAQMIARQ--------------------------------------- 155

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           P        G  N + +  +   S     +H T +P        F +SGC+R+ N  D+ 
Sbjct: 156 PYLPRFMAGGPGNPLGARAMYLGSTE-YRIHGTNDPSTIGK---FVSSGCIRLTN-EDVA 210

Query: 354 VWLLKDTPT 362
               + T  
Sbjct: 211 DLFSRATVG 219


>gi|303240113|ref|ZP_07326634.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
 gi|302592382|gb|EFL62109.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
          Length = 231

 Score = 62.7 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  +  V ++++RL   G  D S  +S  +D     AV+ FQM + L  +G+ +
Sbjct: 32  AEKLAPGMENDDVMKVQQRLKNWGYYDGS--ISGNYDLNTFLAVRDFQMTYKLPANGIAE 89

Query: 159 SSTLEAMNVP 168
             TLE+M + 
Sbjct: 90  EKTLESMGLT 99


>gi|283785786|ref|YP_003365651.1| hypothetical protein ROD_21001 [Citrobacter rodentium ICC168]
 gi|282949240|emb|CBG88850.1| putative exported protein [Citrobacter rodentium ICC168]
          Length = 307

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W  P +  ++
Sbjct: 99  IIVNVAEMRLYYYPPGTNTVEVLPIGIGQAGRETPRNWITTVQRKQEAPSWT-PTANTRR 157

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +        P +                                     G  N M    I
Sbjct: 158 EYAKRGETLPAF----------------------------------VPAGPDNPMGLYAI 183

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                     H T     F   +R  + GC+R+ N  D   +L ++ P  +R  I +   
Sbjct: 184 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLCN--DDIKYLFENVPVGTRVQIIDRPV 236

Query: 374 TRKT-----TPVKLATEV 386
              T       V++   +
Sbjct: 237 KTTTEPDGSRWVEVHEPL 254


>gi|167037751|ref|YP_001665329.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040445|ref|YP_001663430.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|256752473|ref|ZP_05493331.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|289578529|ref|YP_003477156.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|297544804|ref|YP_003677106.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|300914496|ref|ZP_07131812.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307724268|ref|YP_003904019.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|320116165|ref|YP_004186324.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|326389918|ref|ZP_08211481.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166854685|gb|ABY93094.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|166856585|gb|ABY94993.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256748675|gb|EEU61721.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|289528242|gb|ADD02594.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
 gi|296842579|gb|ADH61095.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|300889431|gb|EFK84577.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307581329|gb|ADN54728.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|319929256|gb|ADV79941.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|325993978|gb|EGD52407.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 77

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +L  R L+ G     V +L+  L   G       +   F    ++AV  FQ  +GL   
Sbjct: 4   QQLGSRLLYEGTVGYDVLQLQMILQSLGY--DPGPIDGIFGPRTKNAVMRFQRDNGLKVD 61

Query: 155 GMVDSSTLEAMNV 167
           G+V   T+  +N+
Sbjct: 62  GIVGPETMRVINM 74


>gi|327385617|gb|AEA57091.1| S41A family carboxy-terminal peptidase [Lactobacillus casei BD-II]
          Length = 461

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKGSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|227535121|ref|ZP_03965170.1| Carboxy-terminal processing proteinase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187262|gb|EEI67329.1| Carboxy-terminal processing proteinase [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 390

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 300 INATQLKPGDKGSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 357

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 358 ADQDTLATLAQKLSAQLTK 376


>gi|191638388|ref|YP_001987554.1| Carboxy-terminal processing proteinase [Lactobacillus casei BL23]
 gi|190712690|emb|CAQ66696.1| Carboxy-terminal processing proteinase [Lactobacillus casei BL23]
 gi|327382417|gb|AEA53893.1| S41A family carboxy-terminal peptidase [Lactobacillus casei LC2W]
          Length = 483

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 393 INATQLKPGDKGSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 450

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 451 ADQDTLATLAQKLSAQLTK 469


>gi|116494881|ref|YP_806615.1| periplasmic protease [Lactobacillus casei ATCC 334]
 gi|116105031|gb|ABJ70173.1| Periplasmic protease [Lactobacillus casei ATCC 334]
          Length = 461

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+    V+ L++ L        S  ++  +D   ++AVK FQ  + LD +G 
Sbjct: 371 INATQLKPGDKGSDVKSLQQMLTAL--KVGSVTVNSQYDDATQAAVKTFQQANKLDATGT 428

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D  TL  +   +  ++ +
Sbjct: 429 ADQDTLATLAQKLSAQLTK 447


>gi|220907385|ref|YP_002482696.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7425]
 gi|219863996|gb|ACL44335.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7425]
          Length = 160

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 94  WPELPIR----PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           W  +P       L+  ++  +V  L+E L   G       L   F A  E+AV  FQ R+
Sbjct: 11  WRPVPAALTGPVLYPWDAGPAVFELQELLNAHGF---RLKLDGDFGAKTETAVGEFQRRY 67

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           GL   G+V   T  A+   V    R L+
Sbjct: 68  GLRVDGIVGPQTWVALKQKVQPGTRVLK 95



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 9/94 (9%)

Query: 79  EKAIAFYQDILSRGGWPELPIRP------LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
            +       I+    W  L  +       L  G++   V +L+  L ISG          
Sbjct: 65  RRYGLRVDGIVGPQTWVALKQKVQPGTRVLKRGHTGADVFQLQWLLQISG---QQVVRDG 121

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            F A  E A+  FQ +H L P G+VD  T   + 
Sbjct: 122 IFGAATEQALIEFQQKHKLKPDGIVDLITWRMLR 155


>gi|87124202|ref|ZP_01080051.1| hypothetical protein RS9917_11350 [Synechococcus sp. RS9917]
 gi|86167774|gb|EAQ69032.1| hypothetical protein RS9917_11350 [Synechococcus sp. RS9917]
          Length = 210

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 70/223 (31%), Gaps = 71/223 (31%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +   A  +P   +    Q +L RI   L Q +G++ ++++     L  +++G++  R  
Sbjct: 34  PADRAADPIPPLAQPISEQESLARIPPDLFQTVGVQ-LVLDRTHRQLMVLKDGELTHRFP 92

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
             VG V  +TP    R+   +  P WV P +                             
Sbjct: 93  AAVGTVGWETPAGRHRVLEKVSEPIWVHPVTGE--------------------------- 125

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY------SRNNT----------- 321
                               R   G+ N + S  I FY      +  +            
Sbjct: 126 --------------------RIGQGERNPLGSRWIGFYRDCKGRNGWDGEQYLDIDGCTV 165

Query: 322 -YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
              H TP         R  + GCVR+   N+ ++   +   TP
Sbjct: 166 AGFHGTPYRWTVG---RAVSHGCVRLYEENVQEVFDLVRLGTP 205


>gi|113477429|ref|YP_723490.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110168477|gb|ABG53017.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 266

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+  L   G       +   F +    AVK FQ   G+   G+VD  T
Sbjct: 202 LAKGDRGSKVKTLQIGLGTMGF--NPGPIDGIFGSKTTGAVKEFQKSKGIKADGIVDQKT 259

Query: 162 LEAMNV 167
            +A N 
Sbjct: 260 WKAFNQ 265



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + +  G+    V  ++ RL   G       +   F A    AVK FQ   GL  +G+VD 
Sbjct: 108 KKISQGSRGAEVWAVQRRLQARGF--NPGAVDSIFGARTTKAVKAFQESVGLTVTGIVDE 165

Query: 160 STLEAMNVP 168
            T  ++  P
Sbjct: 166 LTWTSLAKP 174


>gi|256004227|ref|ZP_05429210.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|255991817|gb|EEU01916.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|316939606|gb|ADU73640.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           1313]
          Length = 289

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 44/145 (30%), Gaps = 17/145 (11%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-----ALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            I +  + +++     + P ++    ++         +    +    + +    G+ V  
Sbjct: 146 KIFNVTVQQLINANPGINPNALYVGQVICIPVAPSSVRIIVSIAAKTLSLY-RDGRLVKS 204

Query: 284 EEVDWNSPEPPNFI-----FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    P  P          +         +  +     +   +H T  P         
Sbjct: 205 YPVATGKPTTPTPRGTFTIINKQVNPGGPFGTRWMGLSQPH-YGIHGTNNPASIGT---A 260

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTP 361
            ++GC+R+   ++ +L   +   TP
Sbjct: 261 ASNGCIRMYNEDVNELFNLVSVGTP 285


>gi|288941087|ref|YP_003443327.1| peptidoglycan-binding domain-containing protein [Allochromatium
           vinosum DSM 180]
 gi|288896459|gb|ADC62295.1| Peptidoglycan-binding domain 1 protein [Allochromatium vinosum DSM
           180]
          Length = 604

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 6/100 (6%)

Query: 94  WPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +  G     V+ LR+ +     L    G +  +D  +ESA++ FQ   GL
Sbjct: 505 WQLPPGGSTLIRPGAVGEEVRWLRDLVSRVPGLASLPGPADRYDVTLESALRAFQASKGL 564

Query: 152 DPSGMVDSSTL----EAMNVPVDLRIRQLQVNLMRIKKLL 187
              G+    T     +A+ +    R+ +       ++ L 
Sbjct: 565 TADGVAGPRTFIALYQAIGLDGIPRLDETLATTASMEVLP 604


>gi|281419482|ref|ZP_06250496.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
 gi|281406888|gb|EFB37152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
          Length = 289

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 44/145 (30%), Gaps = 17/145 (11%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-----ALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            I +  + +++     + P ++    ++         +    +    + +    G+ V  
Sbjct: 146 KIFNVTVQQLINANPGINPNALYVGQVICIPVAPSSVRIIVSIAAKTLSLY-RDGRLVKS 204

Query: 284 EEVDWNSPEPPNFI-----FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    P  P          +         +  +     +   +H T  P         
Sbjct: 205 YPVATGKPTTPTPRGTFTIINKQVNPGGPFGTRWMGLSQPH-YGIHGTNNPASIGT---A 260

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTP 361
            ++GC+R+   ++ +L   +   TP
Sbjct: 261 ASNGCIRMYNEDVNELFNLVSVGTP 285


>gi|319760542|ref|YP_004124480.1| Protein erfK/srfK [Candidatus Blochmannia vafer str. BVAF]
 gi|318039256|gb|ADV33806.1| Protein erfK/srfK [Candidatus Blochmannia vafer str. BVAF]
          Length = 301

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 47/210 (22%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAV---ENGKVGLRSTVIVGRVDRQTP-ILHSRINRIM 239
           KKL+      + +++NI    L      +N  + +   + +G    +TP    + I    
Sbjct: 78  KKLILPNTPHKGIIINIAEMRLYYYPNTKNNNIVMVFPISIGTPTHETPSQWITSIKDKK 137

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            +P W IP   I+ + +                                           
Sbjct: 138 KDPIW-IPTQNIRNEYIKR----------------------------------AEILPLM 162

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL- 356
              G  N + S  +   +      H +         +R  T GC+R+   +I  L   + 
Sbjct: 163 ILSGPNNPLGSYALYLGNSYAI--HGSNTN--LGIGLR-VTRGCIRLRTEDIKLLYTLVP 217

Query: 357 LKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           L     +    I+  + +     +++ T +
Sbjct: 218 LNTRVQFINEPIKIAIDSNGMQYLEIHTPL 247


>gi|333008320|gb|EGK27794.1| hypothetical protein SFK272_1649 [Shigella flexneri K-272]
 gi|333019808|gb|EGK39080.1| hypothetical protein SFK227_1287 [Shigella flexneri K-227]
          Length = 149

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
                  G  N M    I   +    Y +H T     F   +R  +SGC+R+R+  D+  
Sbjct: 1   MPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKT 56

Query: 355 WLLKDTPTWSRYHIEEVVK 373
              + TP      I   +K
Sbjct: 57  LFSQVTPGTKVNIINTPIK 75


>gi|254718270|ref|ZP_05180081.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. 83/13]
 gi|265983231|ref|ZP_06095966.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306838217|ref|ZP_07471070.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. NF 2653]
 gi|264661823|gb|EEZ32084.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306406697|gb|EFM62923.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. NF 2653]
          Length = 241

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +  RQ+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNRQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|222084983|ref|YP_002543512.1| hypothetical protein Arad_1040 [Agrobacterium radiobacter K84]
 gi|221722431|gb|ACM25587.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 233

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 59/192 (30%), Gaps = 44/192 (22%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q++    R    L        V+V+     L  VE      R  + VGR D        +
Sbjct: 52  QVKPQFQRRVVRLVTNEAPGTVIVDTNNKFLYLVEGSNRARRYGIGVGR-DGFGWSGVVK 110

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           + R    P W  P  +I ++      + P Y                             
Sbjct: 111 VGRKAEWPGWTPPPEMIARE-AKKGHKLPAY----------------------------- 140

Query: 295 NFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--I 349
                Q+ G+ N + +  +      +     +H T +P      +   +SGC+R+ N  +
Sbjct: 141 -----QEGGEDNPLGARAMYLYRNGNDTAFRIHGTNQPWSIGLNM---SSGCIRMMNKDV 192

Query: 350 IDLDVWLLKDTP 361
            DL   +   T 
Sbjct: 193 TDLYERVPIGTK 204


>gi|258655499|ref|YP_003204655.1| cell wall hydrolase/autolysin [Nakamurella multipartita DSM 44233]
 gi|258558724|gb|ACV81666.1| cell wall hydrolase/autolysin [Nakamurella multipartita DSM 44233]
          Length = 383

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 18/98 (18%)

Query: 86  QDILSRGGWPELPIRPLH-----LGNS-----------SVSVQRLRERLIISGDLDPSKG 129
           + +++ G    +  R L      LG+               V  L+ RL   G    +  
Sbjct: 53  RGLIADGIVGPVTARSLTDARWTLGDRALSYTLSAPMTGDDVMALQTRLSEMGY--NTGR 110

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               F    + +V+ FQ   GL   G+    T + +N 
Sbjct: 111 PDGIFGPLTDLSVRDFQRHRGLADDGVFGPQTYKELNR 148



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV---AFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  LR+ L     L    G+      FD  V+ A++ FQ R GL   G+V 
Sbjct: 3   LRRGDRGPAVADLRDALASLQLLPSLNGVDRGSVEFDTTVDRAIRDFQQRRGLIADGIVG 62

Query: 159 SSTLEAMN 166
             T  ++ 
Sbjct: 63  PVTARSLT 70


>gi|316935742|ref|YP_004110724.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603456|gb|ADU45991.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 258

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 50/182 (27%), Gaps = 46/182 (25%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL   L R     +       ++++     L  V  G   +R  V VGR    T      
Sbjct: 78  QLPDRLRRTVVSYQTNQPAGTIVIDTANTYLYYVLGGGRAIRYGVGVGREG-FTWSGVQT 136

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I R    P W  P  +I +                                        P
Sbjct: 137 ITRKAEWPDWRPPAEMIARQ---------------------------------------P 157

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDL 352
                   G  N + +  +         +H T +P        F +SGC+R+ N  + DL
Sbjct: 158 YLPRFMAGGPGNPLGARAMYLG-STTYRIHGTNDPATIGK---FVSSGCIRLTNEDVEDL 213

Query: 353 DV 354
             
Sbjct: 214 FN 215


>gi|239827637|ref|YP_002950261.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
 gi|239807930|gb|ACS24995.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
          Length = 167

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD--PG--KINAMASTKIEFY----SRNNTY 322
             +     + +  E +   + +  N  +R+   PG    N + +  + F           
Sbjct: 50  YPVATGFNESLTPEGLFMVTVKAENPYYRKQNIPGGAPNNPLGTRWVGFNARGTDGRIYG 109

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +H T  P        + + GCVR+ N  +  L   +   T 
Sbjct: 110 IHGTNNPSSIGK---YVSKGCVRMYNRDVEQLYEKIPIGTK 147


>gi|53802744|ref|YP_112601.1| general secretion pathway protein A [Methylococcus capsulatus str.
           Bath]
 gi|53756505|gb|AAU90796.1| general secretion pathway protein A [Methylococcus capsulatus str.
           Bath]
          Length = 549

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   +  L  G SS +V+ LR+                 FD  +++ V  FQ +HGL   
Sbjct: 470 PAANVTVLRPGESSPAVKWLRQHFPA----KKKPADPQRFDEALKAQVAAFQKQHGLIVD 525

Query: 155 GMVDSSTL 162
           G V   T 
Sbjct: 526 GTVGPHTF 533


>gi|291085195|ref|ZP_06352356.2| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
 gi|291072285|gb|EFE10394.1| LysM domain /ErfK/YbiS/YcfS/YnhG domain protein [Citrobacter
           youngae ATCC 29220]
          Length = 298

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 56/198 (28%), Gaps = 49/198 (24%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           +++N+    L     G        + +G+  R+TP    + + R    P W    +  ++
Sbjct: 87  IVINVAEMRLYYYPPGTNTVEVLPIGIGQAGRETPRNWVTAVERKQEAPSWTPTPNTRRE 146

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               +            G  N M    I
Sbjct: 147 -----------------------------------YAARGETLPAFVPAGPDNPMGLYAI 171

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH-----I 368
                     H T     F   +R  + GC+R+RN  D   +L    P  +R       +
Sbjct: 172 YIGRLYAI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDTVPVGTRVQLIDRPV 224

Query: 369 EEVVKTRKTTPVKLATEV 386
           +  V+   +  +++   +
Sbjct: 225 KYSVEPDGSRWIEVHEPL 242


>gi|115380489|ref|ZP_01467464.1| ErfK/YbiS/YcfS/YnhG family [Stigmatella aurantiaca DW4/3-1]
 gi|115362504|gb|EAU61764.1| ErfK/YbiS/YcfS/YnhG family [Stigmatella aurantiaca DW4/3-1]
          Length = 278

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 75/264 (28%), Gaps = 66/264 (25%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDP 153
              +  G     V+ L+E L+  G      G   AF      AV+ FQ+        +  
Sbjct: 34  KGTIGPGARGTGVRALQEALLAMGF-SLPGGADGAFGKQSAKAVRNFQVHAQSAFPNVKA 92

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +G VD++TL+A++                    L           N+P        +G  
Sbjct: 93  TGGVDAATLQALDA-------------------LAPAPKQTGQSQNLPVPR----YDGTP 129

Query: 214 GLRSTVIVGRVDRQTPILHS--RINRIMFNPYWV--IPRSIIQKDMMALLRQDPQYLKDN 269
                V+V + + +T +  +  ++  I  N       P     K +   L +   Y    
Sbjct: 130 V---RVVVVKNEHRTFLFDAQGQLQGIFGNAVGANSSPTDKGLKQVSGKLGRAEAYALGQ 186

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
            +      G       +D +  +                          +   +H T  P
Sbjct: 187 KL----WGGPVYGPRLIDLSWADGSR-----------------------SGEELHGTNAP 219

Query: 330 ILFNNVVRFETSGCVRVRNIIDLD 353
                     + GC+R  N   + 
Sbjct: 220 DKLGED---VSHGCIRHGNTDIIA 240


>gi|295703756|ref|YP_003596831.1| endopeptidase LytF [Bacillus megaterium DSM 319]
 gi|294801415|gb|ADF38481.1| endopeptidase LytF (cell wall hydrolase) [Bacillus megaterium DSM
           319]
          Length = 303

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           YQ ++            L  G +S  V+++++ L   G    +   +  F    ++ V  
Sbjct: 88  YQALIGNSTSTVTNGTLLKYGMTSNEVEKVQQLLKEKGYF--NATPTGYFGTVTQTVVMN 145

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  HGL   G+V  +T  A+
Sbjct: 146 FQRDHGLAVDGIVGPATSNAL 166



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V+ L++ L   G        +  F +  + +V  FQ  H L   G
Sbjct: 24  ALGDKLLKEGMTDPDVKELQDVLRQKGIFS--ATSTGYFGSITKDSVLSFQRSHSLTADG 81

Query: 156 MVDSSTLEAMNVP 168
           +V S+T +A+   
Sbjct: 82  IVGSNTYQALIGN 94


>gi|229824253|ref|ZP_04450322.1| hypothetical protein GCWU000282_01557 [Catonella morbi ATCC 51271]
 gi|229786607|gb|EEP22721.1| hypothetical protein GCWU000282_01557 [Catonella morbi ATCC 51271]
          Length = 474

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 56/179 (31%), Gaps = 15/179 (8%)

Query: 6   KINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINES-------YHSIVNDRFDNFLAR 58
           K+         Y+ L  G S     I A+ + E                V    +   + 
Sbjct: 282 KLYGDFKITEPYVFLVDGGSASASEILAAAIKENTKHDLVGEKTFGKGTVQQVLN--QSD 339

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGNSSVSVQRLR 115
           +     +    ++ +     ++ I     +        +       L  G S+  V+ L 
Sbjct: 340 LGELKLTIAKWLTPKGDWIHKQGIEPTVAVEQEPVAKAVSLSYDDTLAKGQSNDGVKNLA 399

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
             L   G        +  FD  +E+AVK FQ   GL   G V   T +A+N      ++
Sbjct: 400 LILKALGY---ELESTEYFDDKMEAAVKAFQKDKGLTEDGQVTGKTADALNEATREYLK 455


>gi|307945563|ref|ZP_07660899.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
 gi|307771436|gb|EFO30661.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
          Length = 173

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 48/177 (27%), Gaps = 44/177 (24%)

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
               +    + +     +++      L  V  G+  +R  V VGR  +      ++I   
Sbjct: 27  QAAEVVGFQDHRFRPGTIVIRNSERRLYLVLRGQRAIRYKVAVGRPAKA-WTGQAQIIGK 85

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
              P W              +R+D  +L                                
Sbjct: 86  HVRPDWSP---------SPEVRRDFPHLPR-----------------------------L 107

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            +     N M    +   + N   +H T  P       R  + GC+R+ N  D+   
Sbjct: 108 IRGGAPNNPMGIAAMTLSNGN-YAIHGTNRPGSIG---RAVSYGCIRMAN-HDIADL 159


>gi|291541737|emb|CBL14847.1| ABC-type Fe3+-hydroxamate transport system, periplasmic component
           [Ruminococcus bromii L2-63]
          Length = 420

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L + + +V+ ++ RL   G +     ++  +      AVK FQ  +GL  +G  D++
Sbjct: 347 SLKLEDENDTVKAMQLRLYNIGYIADKDNVTGYYGEVTAEAVKKFQKNNGLKETGTADNA 406

Query: 161 TLEAMNVPVDLRIR 174
           TL  +      + +
Sbjct: 407 TLVLLFDSSAKKAK 420


>gi|149180623|ref|ZP_01859127.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1]
 gi|148851776|gb|EDL65922.1| hypothetical protein BSG1_16740 [Bacillus sp. SG-1]
          Length = 165

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 20/173 (11%)

Query: 194 RYVLVNIPAASLE-AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
            Y     P  +L    E+ +V  R  V    +     IL   + + +  P    P  I  
Sbjct: 1   MYQHSVKPGETLWSISEDYRVSFRELVRTNNITNPNLIL---VGQKITIPGLPDPNQIPL 57

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
              ++  ++    L+ N   +       GK +    V               P       
Sbjct: 58  SIHVSTSQRKLT-LQRNGTVVKTYPIAVGKMLSATPVGQYVIINK------APNPGGPFG 110

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           +  +    ++   +H T  P          + GC+R+ N  + +L   +   T
Sbjct: 111 TMWMSLSKKH-YGIHGTNNPASIGK---AVSKGCIRMYNSDVEELARTIPIGT 159


>gi|289823791|ref|ZP_06543403.1| hypothetical protein Salmonellentericaenterica_00937 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 309

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  T  H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAT--HGTNA--NFGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|282900449|ref|ZP_06308398.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194642|gb|EFA69590.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 232

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN+   V +L+  L   G       +   F   +E AVK  Q+R+GL   G+V   T
Sbjct: 163 LRLGNTGAEVTKLQRLLRALGFFPS--PIDGKFSVTLERAVKAAQLRYGLTADGVVGGQT 220

Query: 162 LEAMNV 167
            +    
Sbjct: 221 WDVFIQ 226



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y  I    G   +    L +G+   SV  L+  L + G       +   +      AV  
Sbjct: 6   YTPIAQVTGVGSINRPMLKIGSQGESVSELQATLALLGFYS--GPVDGVYRDSTAKAVSQ 63

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPV 169
           F+   GL P G+VD+ T + +   V
Sbjct: 64  FKQVVGLAPDGIVDTITWQKLFPSV 88


>gi|125975485|ref|YP_001039395.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|125715710|gb|ABN54202.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
          Length = 289

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 44/145 (30%), Gaps = 17/145 (11%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMM-----ALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            I +  + +++     + P ++    ++         +    +    + +    G+ V  
Sbjct: 146 KIFNVTVQQLINANPGINPNALYVGQVICIPVAPSSVRIIVSIAAKTLSLYR-DGRLVKS 204

Query: 284 EEVDWNSPEPPNFI-----FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
             V    P  P          +         +  +     +   +H T  P         
Sbjct: 205 YPVATGKPTTPTPRGTFTIINKQVNPGGPFGTRWMGLSQPH-YGIHGTNNPASIGT---A 260

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTP 361
            ++GC+R+   ++ +L   +   TP
Sbjct: 261 ASNGCIRMYNEDVNELFNLVSVGTP 285


>gi|295704058|ref|YP_003597133.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium DSM 319]
 gi|294801717|gb|ADF38783.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium DSM 319]
          Length = 231

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     +  G+    VQ ++  LI  G      G    F +    AVK FQ    L   
Sbjct: 153 PKASSMLIKYGDRGNHVQLIQRMLIHLGY-SLFGGADGIFGSSTFKAVKAFQQALYLQVD 211

Query: 155 GMVDSSTLEAM 165
           G+V   TLE +
Sbjct: 212 GIVGPKTLEKL 222


>gi|288555862|ref|YP_003427797.1| hypothetical protein BpOF4_14280 [Bacillus pseudofirmus OF4]
 gi|288547022|gb|ADC50905.1| Uncharacterized erfK/srfK family protein, probably secreted
           [Bacillus pseudofirmus OF4]
          Length = 164

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 59/177 (33%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +G  Y+++NI    L  + +G+V     V  G+   +TP     +               
Sbjct: 20  LGDPYLIINIETNELAFIYDGQVQRVYRVASGKEGAETPEGEFTVVVK------------ 67

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
                     ++P Y             +++ ++  D                  N + +
Sbjct: 68  ---------AENPYY-------------RKLDIKGGD----------------PHNPLGT 89

Query: 311 TKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
             I F           +H T  P    +     T+GCVR+ N  +  L   +   T 
Sbjct: 90  RWIGFDAEGTDGRIYGIHGTNRPDSIGS---HVTAGCVRLPNEEVEQLFDQIPLGTK 143


>gi|220929601|ref|YP_002506510.1| peptidoglycan-binding protein [Clostridium cellulolyticum H10]
 gi|219999929|gb|ACL76530.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulolyticum
           H10]
          Length = 549

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 20/147 (13%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI-PIISKETIAQTEKAI-- 82
           L    I   V D  +      ++          +D   D    P+     + Q +  +  
Sbjct: 102 LKGDIITLGVKDITVTVIQKRLME----LDYLEIDEPTDEFGEPLQFAIELFQRKNKLPI 157

Query: 83  ------AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
                   Y+ +LS           + L      VQ+L+ERL   G +     ++  F +
Sbjct: 158 TGEVDAKTYELLLSEDA----KAYTVSLEAEGTDVQQLQERLYELGYI---NKVTGYFGS 210

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLE 163
             ++AVK FQ R+GL   G V   T E
Sbjct: 211 DTDTAVKEFQKRNGLYDDGNVGKQTRE 237



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+ +  + + ++RL   G L  +   S  ++     AVK FQ  +GL   G +   T +
Sbjct: 251 LGDENGEILQYKQRLYELGYL--TAKPSGKYNNDTVLAVKRFQENNGLISDGYIGPVTKD 308

Query: 164 -AMNVPVDLRIRQLQVNLMRIK 184
             M+         +  N   + 
Sbjct: 309 LLMSADATENALDIGDNGEDVT 330



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G++   V +++  L+  G L    G++  F +   +AV  FQ R+GL   G V S 
Sbjct: 319 ALDIGDNGEDVTKVQTYLMKLGYLK---GVTGYFGSDTHNAVLKFQSRNGLGQDGKVGSQ 375

Query: 161 TLEAMNVPVDLRIR 174
           T+  +      +  
Sbjct: 376 TIAKLLSSDARKWT 389



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 95  PELPIRPLH-----LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            ++P+ PL      LG   ++V  +++RL+    L+  +     F   ++ A++LFQ ++
Sbjct: 95  GKVPLNPLKGDIITLGVKDITVTVIQKRLMELDYLEIDEPTDE-FGEPLQFAIELFQRKN 153

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
            L  +G VD+ T   + +  D +   + +   
Sbjct: 154 KLPITGEVDAKTY-ELLLSEDAKAYTVSLEAE 184


>gi|21243340|ref|NP_642922.1| carboxypeptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108884|gb|AAM37458.1| carboxypeptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 431

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 35/120 (29%), Gaps = 11/120 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G     V++L+ +L   G +            F    + AV+ FQ  HGL   G
Sbjct: 211 DGKLEQGERGEQVKQLQGQLAQLGAVGRDGKPLRADGDFGGNTKYAVEQFQREHGLQIDG 270

Query: 156 MVDSSTLEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           +    T  A+            +               LL         + N   + LEA
Sbjct: 271 VAGQQTQAALAKVLAQATPKQPEHTAAPAAPAQAASSPLLSDPRHPDNAMYNGAVSKLEA 330


>gi|326776721|ref|ZP_08235986.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657054|gb|EGE41900.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 232

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  ++G    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 26  TRTLKAGATGNDVTQLQIR--VAGYPGYNSVLAIDGSYGPATTAAVKRFQAAYGLAADGV 83

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 84  AGPATQAKL 92


>gi|182436095|ref|YP_001823814.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178464611|dbj|BAG19131.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 245

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  ++G    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 39  TRTLKAGATGNDVTQLQIR--VAGYPGYNSVLAIDGSYGPATTAAVKRFQAAYGLAADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATQAKL 105


>gi|307267035|ref|ZP_07548550.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306917960|gb|EFN48219.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 77

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +L  R L+ G     V +L+  L   G       +   F    ++AV  FQ  +GL   
Sbjct: 4   QQLGSRLLYEGTVGYDVLQLQMILQSLGY--DPGPIDGIFGPRTKNAVMKFQRDNGLKVD 61

Query: 155 GMVDSSTLEAMNV 167
           G+V   T+  +N+
Sbjct: 62  GIVGPETMRVINM 74


>gi|91978583|ref|YP_571242.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91685039|gb|ABE41341.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 263

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 69/205 (33%), Gaps = 49/205 (23%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR--YVLVNIPAA 203
           Q RH L P   +D    + M     +   +   +    K+L++   G +   ++V+ P  
Sbjct: 87  QRRHYLPP---MDPQAPQVMRQQEAIDPARPAFDPKFEKQLVDYNGGEKPGTIVVDTPNK 143

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  V+     +R  + VGR    T      I+     P W  P     K+M+A     P
Sbjct: 144 FLYLVQGDGRAMRYGIGVGRPG-FTWSGVKTISAKREWPSWTPP-----KEMLARRPDLP 197

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
           +Y++                                   G  N + +  +   S     +
Sbjct: 198 RYME----------------------------------GGPDNPLGARAMYLGSS-LYRI 222

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN 348
           H + EP          +SGC+R+RN
Sbjct: 223 HGSNEPWTIGTN---VSSGCIRMRN 244


>gi|300853500|ref|YP_003778484.1| spore cortex-lytic enzyme [Clostridium ljungdahlii DSM 13528]
 gi|300433615|gb|ADK13382.1| spore cortex-lytic enzyme precursor [Clostridium ljungdahlii DSM
           13528]
          Length = 229

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V +++++L   G    +  +   +     +AVK FQ ++GL   G+V  +TL A
Sbjct: 44  GSRGNMVIQIQQKLRSWGYY--NGSVDGVYGYQTYTAVKYFQSKNGLKSDGIVGDATLAA 101

Query: 165 MNVP 168
           + + 
Sbjct: 102 LAIN 105


>gi|302392565|ref|YP_003828385.1| peptidase M23 [Acetohalobium arabaticum DSM 5501]
 gi|302204642|gb|ADL13320.1| Peptidase M23 [Acetohalobium arabaticum DSM 5501]
          Length = 354

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V+ L++RL   G    S  +   F    +  VK FQ ++ L   G+V + T
Sbjct: 35  LEVGMRGSDVKLLQQRLNNLGY---SIEVDGIFGKETKKIVKKFQEKNDLFSDGIVGTRT 91

Query: 162 LEAMN 166
           +  + 
Sbjct: 92  IYYLQ 96


>gi|163852067|ref|YP_001640110.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163663672|gb|ABY31039.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 248

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 51/199 (25%), Gaps = 46/199 (23%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +     + +                 + R             ++V+     L  ++ 
Sbjct: 75  LPTANAALPADIPGAPADPLASTVPQMTAIPRDTVPYSGPYAPGTIVVSTTERRLYLIQP 134

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   LR  V VGR    T      +      P W  P  ++++                 
Sbjct: 135 GGEALRYGVGVGRPG-FTWGGTQTVTMKREWPDWRPPSEMLRRR---------------- 177

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEP 329
                                  P+       G  N + +  +   +    Y +H + EP
Sbjct: 178 -----------------------PDLPRYMKGGIENPLGARAMYLGN--TIYRIHGSNEP 212

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     +SGC+R+ N
Sbjct: 213 ETIGT---AVSSGCIRMTN 228


>gi|114706198|ref|ZP_01439101.1| ErfK/YbiS/YcfS/YnhG [Fulvimarina pelagi HTCC2506]
 gi|114539044|gb|EAU42165.1| ErfK/YbiS/YcfS/YnhG [Fulvimarina pelagi HTCC2506]
          Length = 173

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 46/175 (26%), Gaps = 46/175 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +   +       ++V      L  V      +   + VG+   Q     S ++R    
Sbjct: 31  RPEISFQADADPGTIVVKTAERKLYLVTGPGKAMVYDIAVGKPSEQ-WFGKSWVSRKRRA 89

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P WV   S+ ++                                        P       
Sbjct: 90  PTWVPTPSMRER---------------------------------------NPRLPQSIG 110

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV 354
           PG  N +    I         +H T  P    +     ++GC R+RN    DL  
Sbjct: 111 PGPKNPLGERAINLGWG-AYRIHGTNNPRSIGS---AASAGCFRMRNADVKDLFE 161


>gi|331269554|ref|YP_004396046.1| glycosyl hydrolase, family 25 [Clostridium botulinum BKT015925]
 gi|329126104|gb|AEB76049.1| glycosyl hydrolase, family 25 [Clostridium botulinum BKT015925]
          Length = 323

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + ++ERL+  G      G    F    E AVK  Q  +GL   G+V   T 
Sbjct: 258 RRGAKGNITKIIQERLLAKGYRIGIYGADGIFGPETERAVKNLQKNYGLQIDGIVGKETW 317

Query: 163 EAM 165
           +A+
Sbjct: 318 QAL 320


>gi|182417949|ref|ZP_02949259.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237669439|ref|ZP_04529421.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378258|gb|EDT75792.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237655326|gb|EEP52884.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 575

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P + L LG+S   V+ ++ +L  I      +     ++  F+   ++AVK FQ    L  
Sbjct: 307 PGKALKLGDSGSDVKVIQTQLNRIRKNYPAIPQINNVNGEFNDATKNAVKEFQKIFNLTA 366

Query: 154 SGMVDSSTLEAMNV 167
            G+V   T   ++ 
Sbjct: 367 DGIVGKKTWYKISQ 380



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           E+P   L LG+   +V+ L+  LI  G   D      ++  FD   E++VK FQ    LD
Sbjct: 403 EIPTEVLKLGSQGTNVKILQYLLICIGAFYDSILPVKITGKFDTDTENSVKSFQQEFNLD 462

Query: 153 PSGMVDSSTLEAM 165
             G+V   T   +
Sbjct: 463 NDGIVGKKTWSKL 475



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKL 144
           + + G + + P   +  G     VQ+++  L  I S     P   +   F +    AV  
Sbjct: 487 LDASGKFIKYPGYLIKKGKRGEDVQQIQVWLNTIHSKYPFIPEVDVDGIFGSGTREAVMD 546

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  + L   G+V   T + +
Sbjct: 547 FQRWNDLVEDGIVGKLTWDKL 567


>gi|302865629|ref|YP_003834266.1| peptidase M15A [Micromonospora aurantiaca ATCC 27029]
 gi|302568488|gb|ADL44690.1| Peptidase M15A [Micromonospora aurantiaca ATCC 27029]
          Length = 259

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ R+           +   +     +AVK FQ  +GL   G+    T
Sbjct: 43  LSQGQSGSDVRQLQIRVAGWAAYGGIVRVDGVYGPETAAAVKRFQAAYGLRADGVAGPKT 102

Query: 162 LEAM 165
              +
Sbjct: 103 FAKI 106


>gi|188991092|ref|YP_001903102.1| putative carboxpeptidase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167732852|emb|CAP51046.1| putative carboxpeptidase [Xanthomonas campestris pv. campestris]
          Length = 431

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 35/121 (28%), Gaps = 11/121 (9%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPS 154
               L  G     V++L+ +L   G +            F    + AV+ FQ  HGL   
Sbjct: 210 TDGKLEQGERGEQVKQLQGQLAQLGAVGRDGKPLKPDGDFGGNTKYAVEQFQREHGLQID 269

Query: 155 GMVDSSTLEAM--------NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           G+    T  A+            D               LL         + N   + LE
Sbjct: 270 GVAGQQTQAALAKALTQAAPKQPDHTAAPAAPAQAASSPLLSDPRHPDNAMYNGAVSKLE 329

Query: 207 A 207
           A
Sbjct: 330 A 330


>gi|295704404|ref|YP_003597479.1| autolytic lysozyme [Bacillus megaterium DSM 319]
 gi|294802063|gb|ADF39129.1| autolytic lysozyme [Bacillus megaterium DSM 319]
          Length = 298

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+  + V+++++ L+  G   P  G    +   + +AVK FQ R+GL   G+  + TL
Sbjct: 227 GDRGLGVKQIQQNLLALGFSLPKFGADGFYGDELIAAVKKFQNRYGLFSDGIAGADTL 284


>gi|294499079|ref|YP_003562779.1| autolytic lysozyme [Bacillus megaterium QM B1551]
 gi|294349016|gb|ADE69345.1| autolytic lysozyme [Bacillus megaterium QM B1551]
          Length = 298

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+  + V+++++ L+  G   P  G    +   + +AVK FQ R+GL   G+  + TL
Sbjct: 227 GDRGLGVKQIQQNLLALGFSLPKFGADGFYGDELIAAVKKFQNRYGLFSDGIAGADTL 284


>gi|302562363|ref|ZP_07314705.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302479981|gb|EFL43074.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 112

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 96  ELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            +P     L  G+S   V  L+ERL+   D+  S      +DA + +AV  FQ+ +G+  
Sbjct: 30  RVPAEEGFLREGDSGPEVAELQERLLRIPDVYRSGAPDGRYDATLSAAVARFQLWYGVRG 89

Query: 154 S--GMVDSSTLEAMN 166
              G+    T  A+ 
Sbjct: 90  DETGVYGDDTRFALE 104


>gi|205373921|ref|ZP_03226722.1| hypothetical protein Bcoam_12030 [Bacillus coahuilensis m4-4]
          Length = 168

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 51/195 (26%), Gaps = 61/195 (31%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G  ++++N     L   +  ++     V  GR D  TP     +               
Sbjct: 24  PGDPFIIINKTTNELAFFQKNELQHIYQVGTGRTDDLTPEGLFTVTVK------------ 71

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK-INAMA 309
                     ++P Y             +++ +                   G   N + 
Sbjct: 72  ---------AKNPYY-------------RKLDI-----------------PGGDSNNPLG 92

Query: 310 STKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           +  I F           +H T           + ++GCVR+ N       L    P  ++
Sbjct: 93  TRWIGFDAEETDGRIYGIHGTNRAESIGY---YVSNGCVRMTNPS--VEELFDRIPLGTK 147

Query: 366 YHIEEVVKTRKTTPV 380
             I     T +   +
Sbjct: 148 VLIINKTATFEEIAI 162


>gi|29141352|ref|NP_804694.1| hypothetical protein t0859 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213426663|ref|ZP_03359413.1| hypothetical protein SentesTyphi_14238 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213579910|ref|ZP_03361736.1| hypothetical protein SentesTyph_01353 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213609905|ref|ZP_03369731.1| hypothetical protein SentesTyp_05022 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648681|ref|ZP_03378734.1| hypothetical protein SentesTy_16206 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213864915|ref|ZP_03387034.1| hypothetical protein SentesT_34134 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|29136979|gb|AAO68543.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 309

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  T  H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 183 YIGRLYAT--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 230


>gi|303229630|ref|ZP_07316418.1| 3D domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302515755|gb|EFL57709.1| 3D domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 201

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 54/189 (28%), Gaps = 32/189 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     VQ+++  L+  G L+ S      F    E AV+ FQ   GL   G V 
Sbjct: 23  AKSVDKGQRGHHVQKIQTMLVHQGYLNDSA--DGIFGHNTELAVRKFQKAKGLAVDGRVG 80

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           ++T+ A+                  +        +      +P   +  +         +
Sbjct: 81  TATMSALEK-------------EETRF---GDSAISRSHNGVPNKYVRVMTMHASA--YS 122

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                    T         I+     +IP                 +++     + D+ G
Sbjct: 123 AQDPGNSNYTATGSRLKKGIVSVDPRIIPL------------GTKMFIEGYGYAVADDVG 170

Query: 279 KEVFVEEVD 287
             +    +D
Sbjct: 171 GAIKGSRID 179


>gi|288960265|ref|YP_003450605.1| hypothetical protein AZL_a05300 [Azospirillum sp. B510]
 gi|288912573|dbj|BAI74061.1| hypothetical protein AZL_a05300 [Azospirillum sp. B510]
          Length = 371

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 49/192 (25%), Gaps = 47/192 (24%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           +++    L    +        V +GR     P+  S I R   +P W    +  +     
Sbjct: 61  ISLADRRLYLTGSDGATRSFPVAIGRPGVPIPVGGSSIRRKRRDPTWRPTANQRR----- 115

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                                             + P       PG  N +    ++   
Sbjct: 116 ----------------------------------DNPALPRAVPPGPHNPLGKFALDLGW 141

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTR-- 375
                +H T +P       R  + GC R+    D++              + E +     
Sbjct: 142 P-AIAIHGTNDPESIG--TRA-SGGCFRML-PADIETVFAATEVGTPVRVVRESLGANTI 196

Query: 376 -KTTPVKLATEV 386
             T  V +A  V
Sbjct: 197 ADTIAVNVAANV 208


>gi|20807964|ref|NP_623135.1| peptidoglycan-binding domain-containing protein [Thermoanaerobacter
           tengcongensis MB4]
 gi|20516536|gb|AAM24739.1| putative peptidoglycan-binding domain-containing protein
           [Thermoanaerobacter tengcongensis MB4]
          Length = 77

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            EL  R L+ G +   V  L+  L   G       +   F    + AV  FQ  +GL   
Sbjct: 4   QELGSRLLYEGLAGYDVLELQMILQSLGY--DPGPIDGIFGPRTKKAVMKFQRDNGLKVD 61

Query: 155 GMVDSSTLEAMNV 167
           G+V   T++ + +
Sbjct: 62  GIVGPETMKVIRM 74


>gi|154816022|emb|CAO85704.1| putative spore-cortex-lytic enzyme precursor [Clostridium sp.]
          Length = 198

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 2/89 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V  ++++L   G  D S  +   +      AVK FQ ++GL+  G+  + TL A
Sbjct: 92  GSKGGGVSEIQKKLKNWGYYDGS--VDGIYGYKTFLAVKKFQGKNGLNVDGVAGNKTLAA 149

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + + V         N   I  L     G 
Sbjct: 150 LGINVAQAQGSNTSNNRDINLLARLINGE 178


>gi|325289079|ref|YP_004265260.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
           [Syntrophobotulus glycolicus DSM 8271]
 gi|324964480|gb|ADY55259.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
           [Syntrophobotulus glycolicus DSM 8271]
          Length = 424

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G     V  ++  L   G       +   F    E AV+ FQ   GL   G+V   T
Sbjct: 2   LKVGLRGNDVAEVQALLKQRGF--DPGPVDGIFGTKTEQAVRRFQNARGLSADGIVGPLT 59

Query: 162 LEAMNVPVDLRIRQLQ 177
            +A+          +Q
Sbjct: 60  YQALQATSAPSTYTVQ 75


>gi|282900696|ref|ZP_06308638.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194496|gb|EFA69451.1| Peptidoglycan-binding domain protein 1 [Cylindrospermopsis
           raciborskii CS-505]
          Length = 208

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
             S          H  ++  +    A          P       +   K     +D L+ 
Sbjct: 78  TPSKRLIAEQTPAHIRLSYGYKWQQASKRSNNRQLRPQFQLADRSNLPKPKFPSRDYLAY 137

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
              P++P   L  G+S +S++ L+  LI +G    +  +   F A  E+A+K FQ +  L
Sbjct: 138 NR-PQMP--TLRFGDSGLSIRVLQRLLISNGY---NVRVDGVFGALTETAIKAFQSQRNL 191

Query: 152 DPSGMVDSSTLEAM 165
              G+V   T   +
Sbjct: 192 SVDGIVGPKTWSQL 205


>gi|254695317|ref|ZP_05157145.1| hypothetical protein Babob3T_11855 [Brucella abortus bv. 3 str.
           Tulya]
 gi|261215687|ref|ZP_05929968.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260917294|gb|EEX84155.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 244

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 40/156 (25%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I 
Sbjct: 110 PDTIVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIA 168

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           ++                                     +      R D G  N + +  
Sbjct: 169 RE-----------------------------------RKKGRFLPARMDGGINNPLGARA 193

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +         +H T +P      +   +SGC+R+RN
Sbjct: 194 LYLG-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|225175303|ref|ZP_03729298.1| carboxyl-terminal protease [Dethiobacter alkaliphilus AHT 1]
 gi|225169055|gb|EEG77854.1| carboxyl-terminal protease [Dethiobacter alkaliphilus AHT 1]
          Length = 469

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 22/124 (17%)

Query: 78  TEKAIAFY-----QDILSRGGWPELP--------------IRPLHLGNSSVSVQRLRERL 118
               +A Y     +DI   G  P++                R L  G+  ++VQ L++ L
Sbjct: 340 LRYTVAKYQTPNGRDINEVGLEPDVEVELPDELRVLFHRVARDLKPGDEDMNVQFLQQML 399

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
                   +   +  +D+  E AV+ FQ  HGL+ +G ++  T   +N  +D  + +   
Sbjct: 400 KSLDY---NVNDTGVYDSATERAVRSFQNEHGLNATGELNLETRTQLNEEIDRLLEENDT 456

Query: 179 NLMR 182
            + +
Sbjct: 457 QMQK 460


>gi|315502176|ref|YP_004081063.1| peptidase m15a [Micromonospora sp. L5]
 gi|315408795|gb|ADU06912.1| Peptidase M15A [Micromonospora sp. L5]
          Length = 259

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ R+           +   +     +AVK FQ  +GL   G+    T
Sbjct: 43  LSQGQSGSDVRQLQIRVAGWAAYGGIVRVDGVYGPETAAAVKRFQAAYGLRADGVAGPKT 102

Query: 162 LEAM 165
              +
Sbjct: 103 FAKI 106


>gi|160945978|ref|ZP_02093204.1| hypothetical protein FAEPRAM212_03511 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443709|gb|EDP20714.1| hypothetical protein FAEPRAM212_03511 [Faecalibacterium prausnitzii
           M21/2]
          Length = 156

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +     G     P   LH G+S  +V+ ++++L   G           + A   +AV+ F
Sbjct: 79  RYTAKHGLKVPYPGIVLHTGSSGGTVRLVQQKLNSLG---ERLKDDGKYGAATAAAVQRF 135

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q R+GL   G V  +T E M
Sbjct: 136 QRRNGLPADGSVGCATWEKM 155



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S   V  ++  L    D      +      F A  + AV+ FQ+++ ++  G V 
Sbjct: 10  LQRGSSGPDVALVQTWLNGVRDACTWYDALKADGKFGASTQRAVQEFQLKNKMNMDGKVG 69

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 70  QNTWNVL 76


>gi|148251944|ref|YP_001236529.1| hypothetical protein BBta_0331 [Bradyrhizobium sp. BTAi1]
 gi|146404117|gb|ABQ32623.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 178

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 45/165 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           +        ++V      L  V +G+  +R  V VG+  RQ     ++I+     P W  
Sbjct: 40  MAGDFSPGTIVVKTGERKLYLVLDGRHAMRYPVGVGKAGRQ-WAGTTKIDGKYKYPAWAP 98

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + PN       G   
Sbjct: 99  PAEVKR---------------------------------------DKPNLPDVIAGGSPH 119

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           N M    +     +   +H T  P        F + GC+R+ N  
Sbjct: 120 NPMGVAAMTLAGGD-YAIHGTNVPGSVG---GFVSYGCIRMLNAD 160


>gi|325920413|ref|ZP_08182342.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325549103|gb|EGD20028.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 466

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 8/117 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G    SV++L+ +L   G              F    + AV+ FQ  HGL   G
Sbjct: 249 DGRLEQGERGQSVKQLQSQLAQLGATGRDGKPLQADGDFGGNTKHAVEHFQREHGLQVDG 308

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKK-----LLEQKMGLRYVLVNIPAASLEA 207
           +V   T  A+   +     +               LL         + N   + LEA
Sbjct: 309 VVGQRTQAALGQALSQHTAKHAEQSAPQAAPVGIPLLSDPRHPDNAIYNGAVSKLEA 365


>gi|302536111|ref|ZP_07288453.1| predicted protein [Streptomyces sp. C]
 gi|302445006|gb|EFL16822.1| predicted protein [Streptomyces sp. C]
          Length = 387

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 3/133 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L+  LI  G           F A   +AVK +Q  H    +G V  
Sbjct: 123 RALRAGDKGEDVRQLKRNLIALGYGTGLDAQDGTFTAGTAAAVKRWQKAHKAPETGEVAR 182

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             +   + P  ++  +  +            +     +V      L+A + G       V
Sbjct: 183 EDIAFASGPQRVKRTEAALGDEPGPGKPVLTVTGTERIVR---FQLDAAKAGSAKTGDKV 239

Query: 220 IVGRVDRQTPILH 232
            V      +    
Sbjct: 240 TVRLPGGGSAAGK 252


>gi|305681688|ref|ZP_07404494.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii
           ATCC 14266]
 gi|305658848|gb|EFM48349.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium matruchotii
           ATCC 14266]
          Length = 392

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL----------SVAFDAYVESAVKLFQMR 148
              L +G++S  V  +R+ L   G L                   FD  +E+A++ FQ  
Sbjct: 2   SDVLKVGDNSPRVAEVRKSLARLGLLPNYNESGNPDHAIYNADTLFDDELEAALRGFQQA 61

Query: 149 HGLDPSGMVDSSTLEAMN 166
            G+  SG ++  TL  + 
Sbjct: 62  RGIIASGEINEMTLRVLR 79



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 20/158 (12%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARV--DMGIDSDIPIISKETIAQTEKAIAFY 85
              +        + E   S+                    +   +  + +    +     
Sbjct: 2   SDVLKVGDNSPRVAEVRKSLARLGLLPNYNESGNPDHAIYNADTLFDDELEAALRGFQQA 61

Query: 86  QDILSRGGWPELPIRPLH-----LG-----------NSSVSVQRLRERLIISGDLDPSKG 129
           + I++ G   E+ +R L      LG            S   V +L+++L   G       
Sbjct: 62  RGIIASGEINEMTLRVLREASYELGARVLNYQPHNEMSGDDVVQLQQQLQELGFYS--DR 119

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +   F  +   A+  +QM +GL+  G+   +T+ ++N 
Sbjct: 120 IDGHFGEHTYRALLKYQMNYGLNMDGICGPNTIRSLNR 157


>gi|330830167|ref|YP_004393119.1| Gp28-like protein [Aeromonas veronii B565]
 gi|328805303|gb|AEB50502.1| Gp28-like protein [Aeromonas veronii B565]
          Length = 273

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 37/101 (36%), Gaps = 6/101 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++  +V  L+ RL  +G       +   F    E A+  FQ  + +   G     
Sbjct: 2   SLKKGDTGTAVADLQRRLTAAGY---PLAVDGWFGEATEQALIAFQRDYMIAAIGQAGPR 58

Query: 161 TLEAMNVPVDLRIRQLQVN-LMRIKKLLEQKMGLRYVLVNI 200
           TL A+      R  QL +N +     LL   +     +  +
Sbjct: 59  TLAALLGS--ERGNQLTINHMQAGADLLAVPLATMATVAQV 97


>gi|261417796|ref|YP_003251478.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
 gi|319767392|ref|YP_004132893.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
 gi|261374253|gb|ACX76996.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
 gi|317112258|gb|ADU94750.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
          Length = 168

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 11/109 (10%)

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD--PG-- 303
             +I    +  L        +    +      ++  E +   + +  +  +R+   PG  
Sbjct: 27  PLVIVNKAINKLALVRDGRIEAVYPVATGVNADLTPEGMFTVTVKAKHPYYRKKNIPGGA 86

Query: 304 KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             N + +  I F           +H T  P        + + GCVR+ N
Sbjct: 87  PNNPLGTRWIGFNARGTDGRTYGIHGTNNPASIG---GYVSQGCVRMHN 132


>gi|297529480|ref|YP_003670755.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
 gi|297252732|gb|ADI26178.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
          Length = 168

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 35/109 (32%), Gaps = 11/109 (10%)

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD--PG-- 303
             +I    +  L        +    +      ++  E +   + +  +  +R+   PG  
Sbjct: 27  PLVIVNKAINKLALVRDGRIEAVYPVATGVNTDLTPEGMFTVTVKAKHPYYRKKNIPGGA 86

Query: 304 KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             N + +  I F           +H T  P        + + GCVR+ N
Sbjct: 87  PNNPLGTRWIGFNARGTDGRTYGIHGTNNPASIG---GYVSQGCVRMHN 132


>gi|15964533|ref|NP_384886.1| putative signal peptide protein [Sinorhizobium meliloti 1021]
 gi|307308481|ref|ZP_07588185.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15073710|emb|CAC45352.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306901084|gb|EFN31692.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 231

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 42/172 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R K           ++V+  +  L  ++      R  + VGR D        ++ R  
Sbjct: 55  YWRTKVRFRTDEAPGTIIVDTNSKYLYYIDGSNRATRYGIGVGR-DGFGWSGVVKVGRKA 113

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  +  ++                                     +       
Sbjct: 114 EWPSWTPPAEMRVRE-----------------------------------RAKGRILPIT 138

Query: 300 QDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           Q  G  N + +  +      R+  + +H T +P      +   +SGC+R+ N
Sbjct: 139 QPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNM---SSGCIRMMN 187


>gi|313885142|ref|ZP_07818894.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619833|gb|EFR31270.1| peptidase, S41 family [Eremococcus coleocola ACS-139-V-Col8]
          Length = 486

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG  S SV  L   L   G    S      FD   E AVK FQ  H LD  G+V   T
Sbjct: 400 LSLGQHSDSVANLNVILNGMGY---SANQKDEFDQDTEKAVKAFQKDHDLDQDGIVTGDT 456

Query: 162 LEAMNVPVDLRIR 174
             A+N+     ++
Sbjct: 457 SAAINLAAQEYLQ 469


>gi|115375071|ref|ZP_01462340.1| negative regulator of beta-lactamase expression [Stigmatella
           aurantiaca DW4/3-1]
 gi|310825431|ref|YP_003957789.1| n-acetylmuramoyl-l-alanine amidase, family 2 [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367909|gb|EAU66875.1| negative regulator of beta-lactamase expression [Stigmatella
           aurantiaca DW4/3-1]
 gi|309398503|gb|ADO75962.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Stigmatella
           aurantiaca DW4/3-1]
          Length = 280

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G++  +V++L++ L+ +G +  ++  +    F    E+AVK FQ    L  +G
Sbjct: 29  PPAGLRRGDTGPNVKKLQDALVKTGYMTQAQVNTGYGTFGPKTEAAVKKFQADKKLPTTG 88

Query: 156 MVDSSTLEAMNVPVD 170
                T  A+   + 
Sbjct: 89  FYGDLTHAALKKTLA 103


>gi|167900261|ref|ZP_02487662.1| bacteriophage-acquired protein [Burkholderia pseudomallei 7894]
          Length = 270

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AVK  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDETTERAVKALQAAAGLVDDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +++R
Sbjct: 61  YAVLASGQRDPKHLTLADIVR 81


>gi|312794953|ref|YP_004027875.1| hypothetical protein RBRH_00889 [Burkholderia rhizoxinica HKI 454]
 gi|312166728|emb|CBW73731.1| Hypothetical protein RBRH_00889 [Burkholderia rhizoxinica HKI 454]
          Length = 268

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG+    V RL+ RLI +G       ++  +DA  E+AV   Q+  GL   G+    
Sbjct: 3   PLRLGDHGYEVGRLQRRLIRAGY---RPQVTHRYDAATEAAVTALQIHTGLVVDGIAGPQ 59

Query: 161 TLEAMN 166
           TL A+N
Sbjct: 60  TLIALN 65


>gi|168177537|ref|ZP_02612201.1| spore-cortex-lytic enzyme [Clostridium botulinum NCTC 2916]
 gi|226947425|ref|YP_002802516.1| spore-cortex-lytic enzyme [Clostridium botulinum A2 str. Kyoto]
 gi|182671104|gb|EDT83078.1| spore-cortex-lytic enzyme [Clostridium botulinum NCTC 2916]
 gi|226841988|gb|ACO84654.1| spore-cortex-lytic enzyme [Clostridium botulinum A2 str. Kyoto]
          Length = 231

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    + +++ +L   G    + G+   F     +AV+ FQ ++GL   G++   TL A
Sbjct: 43  GHRGDIISQVQRKLKAWGYY--NGGVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLAA 100

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + +           N   +  L     G 
Sbjct: 101 LGIKTGASGSSSSSNNQDVMLLARLINGE 129


>gi|86749088|ref|YP_485584.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86572116|gb|ABD06673.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 233

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 46/180 (25%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
           D    ++   L R       +     ++++ P   L  V  G   +R  + VGR D  T 
Sbjct: 66  DASAAEMPARLKRQIVSYATREAPGTIVIDTPNTYLYYVLGGGRAIRYGIGVGR-DGFTW 124

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
                I R    P W  P  +I +           YL  +                    
Sbjct: 125 SGVQSITRKAEWPDWTPPPEMIARQP---------YLPRH-------------------- 155

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                        G  N + +  +        Y +H T  P          +SGC+R+ N
Sbjct: 156 ----------MAGGPGNPLGARAMYL--GGTIYRIHGTNAPSTIGT---HVSSGCIRLTN 200


>gi|197334919|ref|YP_002157038.1| general secretion pathway protein A [Vibrio fischeri MJ11]
 gi|197316409|gb|ACH65856.1| general secretion pathway protein A [Vibrio fischeri MJ11]
          Length = 518

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           ++  + +  + +  + + +      W  P +  R +  G+   ++  L   L  +  L+ 
Sbjct: 407 LLPSKRVEVSHQWFSRHWNGAYVQLWQKPIITERAMRKGDEGAAIFALNHLLSTA--LEQ 464

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
               S  FD   E  VK FQ   GL   G+  SSTL  ++   +     LQ
Sbjct: 465 PMVESDRFDEKTEQQVKQFQEIFGLKEDGIAGSSTLMWLDSVTNANAPLLQ 515


>gi|289806037|ref|ZP_06536666.1| hypothetical protein Salmonellaentericaenterica_16947 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 242

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 44/175 (25%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 35  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 93

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 94  E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 119

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                  T  H T     F   +R  + GC+R+RN  D   +L    P  +R  I
Sbjct: 120 YIGRLYAT--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDHVPVGTRVQI 167


>gi|296103662|ref|YP_003613808.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058121|gb|ADF62859.1| ErfK/YbiS/YcfS/YnhG family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 311

 Score = 62.4 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 62/220 (28%), Gaps = 50/220 (22%)

Query: 176 LQVNLMRIKKLLEQKMGL---RYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-I 230
           L  +  R+    +  +     + ++VN+    L     G        + +G+  R+TP  
Sbjct: 75  LPQSGTRLVVPQQLILPDTVRKGIVVNVAEMRLYYYPPGSNTVEVFPIGIGQAGRETPRN 134

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
             + + R    P W    +  ++                                    +
Sbjct: 135 WVTAVERKQEGPTWSPTPNTRRE-----------------------------------YA 159

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            E          G  N M    +          H T     F   +R  + GC+R+RN  
Sbjct: 160 KEGKTLPAFVPAGPDNPMGLYALYIGRLYAI--HGTNSN--FGIGLR-VSQGCIRLRN-N 213

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKT----TPVKLATEV 386
           D+       +P      I++ VK          V++   +
Sbjct: 214 DIKYLFDNVSPGTRVQLIDQPVKVTTEPDGSRWVEVHEPL 253


>gi|291453033|ref|ZP_06592423.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
 gi|291355982|gb|EFE82884.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
          Length = 320

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGWP      L  G S  +V  ++  +   G           + +   +AVK F
Sbjct: 183 RGVDLGGGWPR-----LDPGASGATVVVVQRLMTQRG---HQLVADGQYGSVSVAAVKKF 234

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q   GL   G V  +T   + + +  
Sbjct: 235 QAAQGLVADGQVGPATWPKLVLTLRQ 260



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 30/161 (18%)

Query: 16  VYLILPMGLSLVEK--PIHASVLDEIINESYH----SIVNDRFDNFLARVDMGIDSDIPI 69
           V  +   G+ L      +        +                D     V +        
Sbjct: 177 VAFMAARGVDLGGGWPRLDPGASGATVVVVQRLMTQRGHQLVADGQYGSVSVAAV----- 231

Query: 70  ISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
                     K     Q +++ G      WP+L +  L  G+S   V  L+  L      
Sbjct: 232 ----------KKFQAAQGLVADGQVGPATWPKLVL-TLRQGSSGQQVSALQTALNRR--- 277

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  +F +   +AV+ +Q  + L   G     T  A+
Sbjct: 278 SAGLVVDGSFGSVTTTAVRAYQSLNRLVVDGEAGPVTWRAL 318


>gi|167464376|ref|ZP_02329465.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322383048|ref|ZP_08056876.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152817|gb|EFX45442.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 230

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 12/89 (13%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNN 334
             GK+     +   +       +       +   +  I        Y +H T  P     
Sbjct: 68  GLGKQKTPTPIGEFTVINKYKNW------GSGFGTRWIGLNVPWGIYGIHGTNRPDSIG- 120

Query: 335 VVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             R ++ GC+R+  RN+  L  W+   T 
Sbjct: 121 --RHQSHGCIRMYNRNVEILYEWVKIGTK 147



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    RPL  G+S + VQ ++ RL  +G    +   +  F    E A+K F+  H L 
Sbjct: 156 GPPYEDPRPLAAGDSGIDVQLIQYRLKSAGYF--NGICNGKFGPQTELALKRFEKDHDLP 213

Query: 153 PSGMVDSSTLEAMN 166
             G++     EA+ 
Sbjct: 214 IDGVMGRQDYEALG 227


>gi|149371059|ref|ZP_01890654.1| hypothetical protein SCB49_05220 [unidentified eubacterium SCB49]
 gi|149355845|gb|EDM44403.1| hypothetical protein SCB49_05220 [unidentified eubacterium SCB49]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P   L  G+S+ +V+ L++ L+       S      F    E A+K FQ  + +   G
Sbjct: 149 TIPSGYLRKGDSNENVKMLQKILLKLNYSPGSA--DGIFGLKTEVALKEFQEANNITIDG 206

Query: 156 MVDSSTLEAMN 166
           +  S T +   
Sbjct: 207 IYGSETRQVFE 217


>gi|302532090|ref|ZP_07284432.1| predicted protein [Streptomyces sp. C]
 gi|302440985|gb|EFL12801.1| predicted protein [Streptomyces sp. C]
          Length = 91

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 105 GNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G++   V+ ++  LI   G     KG+   F A  ESAVK  Q  HGL   G+V + T +
Sbjct: 23  GDAGAKVKEIQALLIQHHGYAVGPKGVDGYFGAGTESAVKRLQRGHGLKADGIVSAKTWD 82

Query: 164 AMNVPVDLR 172
            +      R
Sbjct: 83  RLRGEPLDR 91


>gi|300361594|ref|ZP_07057771.1| carboxy-terminal processing protease CtpA [Lactobacillus gasseri
           JV-V03]
 gi|300354213|gb|EFJ70084.1| carboxy-terminal processing protease CtpA [Lactobacillus gasseri
           JV-V03]
          Length = 482

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L     ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKKSMTGVDVATLQQYLTALGYLPK--HVTGVFDDETKNAVIKFQKEHNLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIR 174
              + + V  +++
Sbjct: 451 QAQLYLAVAQKLQ 463


>gi|332709805|ref|ZP_08429762.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351403|gb|EGJ30986.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 390

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 18/107 (16%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL 118
               + S +P + +E   +   ++  Y                L  G++ + V+ L++ L
Sbjct: 166 PGDWLYSQLPRLRREVRQRLGSSVEDY----------------LREGDTGLKVKELQQSL 209

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              G       +   F      AV  FQ   GL+P+G+V S T +A+
Sbjct: 210 QTQGF--SPGPVDGIFGPATTKAVISFQKFEGLNPNGLVGSKTWDAL 254



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G     V+ L++RL   G           F +  ++AV  +Q   GL   G+V S 
Sbjct: 325 PLIEGAVGSEVEELQQRLQTQGFYA--GATDGDFGSRTKAAVIAYQKAKGLYADGIVGSI 382

Query: 161 TLE 163
           T  
Sbjct: 383 TWS 385


>gi|256111912|ref|ZP_05452868.1| hypothetical protein Bmelb3E_04505 [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993361|ref|ZP_06105918.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764231|gb|EEZ10263.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|326410365|gb|ADZ67429.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M28]
 gi|326553658|gb|ADZ88297.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 244

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|17989404|ref|NP_542037.1| hypothetical protein BMEII1059 [Brucella melitensis bv. 1 str. 16M]
 gi|260564329|ref|ZP_05834814.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|17985279|gb|AAL54301.1| protein ybis precursor [Brucella melitensis bv. 1 str. 16M]
 gi|260151972|gb|EEW87065.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
          Length = 277

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 146 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 203

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 204 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 229

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 230 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 258


>gi|282864837|ref|ZP_06273891.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces sp. ACTE]
 gi|282560262|gb|EFB65810.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces sp. ACTE]
          Length = 517

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 21/142 (14%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
                 +      + +  ++               +    T +   +A    + + + G 
Sbjct: 385 GSAGAQVKAVQQLLHDQGYEPGAVDG---------LFGTATKSAV-QAFQTTRGLPADGT 434

Query: 94  -----WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
                W  L        L  G S  +V+RL+  L  +  L  +  +   F    ++AV+ 
Sbjct: 435 VGARTWTALLSAGTTPQLSQGASGDAVKRLQRALTAA--LGATLAVDGTFGPATDTAVRG 492

Query: 145 FQMRHGLDPSGMVDSSTLEAMN 166
           +Q   GL   G V   T  A+ 
Sbjct: 493 YQKARGLTVDGHVGPDTWAALQ 514


>gi|90407231|ref|ZP_01215418.1| general secretion pathway protein a [Psychromonas sp. CNPT3]
 gi|90311654|gb|EAS39752.1| general secretion pathway protein a [Psychromonas sp. CNPT3]
          Length = 526

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 18/163 (11%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL--------ARVDMGI---- 63
           +Y I    + L            ++  S  S +++              A   + +    
Sbjct: 348 LYAIWGYEVPLEGIDCTQGERVSLVCFSRRSNMSELARLNYPAILKLNNADQSVYVVLYK 407

Query: 64  --DSDIPIISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLI 119
             +    ++  + I+ +E  + +Y D      W  P      L L     +V+ L++ L 
Sbjct: 408 IKEDYQLLLGSQLISVSEAWLQYYWDGDLTLLWKRPFKEKGVLKLSQQGENVRWLKQTLS 467

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                    G    FD  + S V+ FQ    L   G+V S TL
Sbjct: 468 TLQ--AVDLGNDDYFDPALASKVQQFQETQQLSQDGIVGSRTL 508


>gi|67923403|ref|ZP_00516882.1| Peptidoglycan-binding domain 1:Staphylococcus nuclease (SNase-like)
           [Crocosphaera watsonii WH 8501]
 gi|67854738|gb|EAM50018.1| Peptidoglycan-binding domain 1:Staphylococcus nuclease (SNase-like)
           [Crocosphaera watsonii WH 8501]
          Length = 319

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG++  +V ++++ L     L  +      F +   +AV  +Q    L   G+V   
Sbjct: 101 SLKLGDTGEAVGQVQKYLAKLNYLPSNSP-DGIFGSQTNAAVLKYQKDKNLTIDGVVGCG 159

Query: 161 TLEAMNVPVD 170
           T  ++   V 
Sbjct: 160 TFSSLKKDVS 169


>gi|332978200|gb|EGK14932.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 330

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 44/150 (29%), Gaps = 6/150 (4%)

Query: 94  W-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W P +  R    G+    V  L+ RL   G       +   F    + AV+ FQ R GL 
Sbjct: 103 WAPGVSNRIFKKGDRGGYVWELQRRLQFIGYYS--GKIDGKFGWQTDRAVRDFQYRFGLR 160

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             G V S T   +         Q      R  K+           V    + L   +   
Sbjct: 161 VDGRVGSKTKLKLWKATRRWSPQAGKAPQRKAKVTGLTRMKPMTQVPKYTSGLSKYDIDV 220

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +      +      ++      +  ++ N 
Sbjct: 221 IA---KAVHAEARGESYTGKVAVASVILNR 247



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G +   V  L+ RL   G    +  +          AV+LFQ + GL+  G+V 
Sbjct: 32  KSELKVGAAGGDVYELQGRLKYLGFY--TGKIDGRLGWRTYRAVRLFQYQFGLEVDGLVG 89

Query: 159 SSTLEAMNVPVDLRI 173
           S T   +        
Sbjct: 90  SHTKRKLVEASKEWA 104


>gi|297519285|ref|ZP_06937671.1| hypothetical protein EcolOP_16715 [Escherichia coli OP50]
          Length = 170

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 6/68 (8%)

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLD 353
                 G  N +    +     N  Y +H T  P          +SGC+R+       L 
Sbjct: 1   PPVVPAGPNNPLGRYALRLAHGNGEYLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALF 57

Query: 354 VWLLKDTP 361
             +   TP
Sbjct: 58  SSVRTGTP 65


>gi|220933023|ref|YP_002509931.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
 gi|219994333|gb|ACL70936.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
          Length = 263

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 12/86 (13%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
           GK      V   +    +  +           +  +        Y +H T +P       
Sbjct: 104 GKPTTRSPVGEWAIIGKSKDW------GGGFGTRWLGLNVPWGIYGIHGTNKPGSIG--- 154

Query: 337 RFETSGCVRV--RNIIDLDVWLLKDT 360
           R  + GC+R+  R++ +L   +   T
Sbjct: 155 RAASHGCIRMFNRDVEELYDIVPVKT 180



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G + +SV +L++ L   G       +   +      AVK  + + GL   G+ D S 
Sbjct: 197 LKPGMTGLSVMQLQDNLREYGF--NPGYMDARYGPTTVEAVKELESQFGLKVDGIADWSV 254

Query: 162 LEAMNVP 168
           L  +N+P
Sbjct: 255 LYILNLP 261


>gi|316932689|ref|YP_004107671.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600403|gb|ADU42938.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 261

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 47/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++ P   L  V++    LR  V VGR    T      I      P W  P+ ++ +  
Sbjct: 134 IVIDTPNKYLYLVQDDGKALRYGVGVGRPG-FTWSGVKTITAKREWPAWTPPKEMLARR- 191

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 192 --------------------------------------PDLPRHMEGGPQNPLGARAMYL 213

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+RN
Sbjct: 214 GSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 242


>gi|240139393|ref|YP_002963868.1| hypothetical protein MexAM1_META1p2838 [Methylobacterium extorquens
           AM1]
 gi|240009365|gb|ACS40591.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens AM1]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 51/199 (25%), Gaps = 46/199 (23%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +     + +                 + R             ++V+     L  ++ 
Sbjct: 49  LPTANAALPADIPGAPTDPLASTVPQMTAIPRDTVPYSGPYAPGTIVVSTTERRLYLIQP 108

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   LR  V VGR    T      +      P W  P  ++++                 
Sbjct: 109 GGEALRYGVGVGRPG-FTWGGTQTVTMKREWPDWRPPSEMLRRR---------------- 151

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEP 329
                                  P+       G  N + +  +   +    Y +H + EP
Sbjct: 152 -----------------------PDLPRYMKGGIENPLGARAMYLGN--TIYRIHGSNEP 186

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     +SGC+R+ N
Sbjct: 187 ETIGT---AVSSGCIRMTN 202


>gi|332652765|ref|ZP_08418510.1| spore cortex-lytic enzyme SleC [Ruminococcaceae bacterium D16]
 gi|332517911|gb|EGJ47514.1| spore cortex-lytic enzyme SleC [Ruminococcaceae bacterium D16]
          Length = 408

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G+    V+ L+  L ++ + + S     +   +      AV+ +Q + GL   G
Sbjct: 279 PGILRPGDRGSDVRILQYMLALTAEFNESLTPIRVDGIYGNATAQAVRKYQAQAGLQVDG 338

Query: 156 MVDSSTLEAM 165
           +V  +T  ++
Sbjct: 339 IVGPNTWYSL 348



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 54/181 (29%), Gaps = 22/181 (12%)

Query: 70  ISKETIAQTEKAIAFY---------QDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-I 119
           ++++  +  E  I  Y         QD   R      P  PL LG++   V  L+  +  
Sbjct: 145 LAQQGYSAME--ILRYYYGNDIELVQDAPVRNLGQSYPGTPLRLGSTGDDVLVLKTMINR 202

Query: 120 ISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE-----AMNVPVDL 171
           +S           ++  FD   E AVK FQ    L P G+V  +T        +      
Sbjct: 203 VSQSYPAIPKLFPVTNVFDESTEQAVKTFQQIFNLTPDGIVGKATWYKLVYLYVGTNQLS 262

Query: 172 RIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +  +               + G R   V I    L         L    + G     T 
Sbjct: 263 ELVSMGQQFQTFSFQYPGILRPGDRGSDVRILQYMLALTAEFNESLTPIRVDGIYGNATA 322

Query: 230 I 230
            
Sbjct: 323 Q 323


>gi|332296341|ref|YP_004438264.1| NLP/P60 protein [Thermodesulfobium narugense DSM 14796]
 gi|332179444|gb|AEE15133.1| NLP/P60 protein [Thermodesulfobium narugense DSM 14796]
          Length = 233

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+ S  VQ ++E+L   G    +  ++  +D   E AVKL+Q    L  +G+VD
Sbjct: 24  AITLKPGDISDDVQNIKEKLYDLGY---NVTVNKVYDEKTERAVKLYQKEAKLPITGIVD 80

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
             T + + +     I + + 
Sbjct: 81  DITYQCLTMGRMTVIEKYKT 100


>gi|313896346|ref|ZP_07829899.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320529278|ref|ZP_08030368.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
 gi|312975145|gb|EFR40607.1| NlpC/P60 family protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320138452|gb|EFW30344.1| NlpC/P60 family protein [Selenomonas artemidis F0399]
          Length = 246

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L++ L  +G    +   +  FD   E AV  FQ    +  +G+V+++
Sbjct: 27  TLREGSHGHEVLVLQQALQNAGYKIKNA--NGVFDKDTERAVAEFQRDSKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 85  TWRALKDAPATR 96


>gi|238853074|ref|ZP_04643466.1| periplasmic protease [Lactobacillus gasseri 202-4]
 gi|238834322|gb|EEQ26567.1| periplasmic protease [Lactobacillus gasseri 202-4]
          Length = 482

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L     ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKKSMTGVDVATLQQYLTALGYLPK--HVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 451 QAQLYLAVAQKLQDDNPALKKALSLNLKDMED 482


>gi|317127242|ref|YP_004093524.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315472190|gb|ADU28793.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 169

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 6/75 (8%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +P     I  + P    A  +  +    ++   +H T +P    N     + GC+R+ N
Sbjct: 94  ETPTGKFIIINKAPNPGGAFGTMWMSLSKQH-YGIHGTNDPSSIGN---AVSKGCIRMHN 149

Query: 349 --IIDLDVWLLKDTP 361
             + +L   +   TP
Sbjct: 150 QDVEELASIVPIGTP 164


>gi|217979157|ref|YP_002363304.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217504533|gb|ACK51942.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 249

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 70/233 (30%), Gaps = 49/233 (21%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
                 S    A +  A   F   +G    G           V   +R   L     R +
Sbjct: 37  PAGAPSSAPAGAVLSQA-GDFNSMYGEVKDGKF---------VVPAVRQSDLGPAFRRSE 86

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                      ++++  A  L  VE+G   +R  + VGR         S +N     P W
Sbjct: 87  VAYSGSEAPGTIVIDPTAHYLYLVESGGKAMRYGIGVGREGFA-WSGASTVNSKQEWPDW 145

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P+ ++++     L +           +    G                        G 
Sbjct: 146 YPPKEMLERR--PELLKQMS-------QLQSGTG---------------------MPGGP 175

Query: 305 INAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
            N + +     Y    +  Y +H T EP          +SGC+R+  ++++DL
Sbjct: 176 SNPLGARAHYLYQGKVDTLYRIHGTNEPATIGQS---VSSGCIRMVNQDVMDL 225


>gi|260568490|ref|ZP_05838959.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|260155155|gb|EEW90236.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
          Length = 277

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 146 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 203

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 204 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 229

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 230 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 258


>gi|163759692|ref|ZP_02166777.1| hypothetical protein HPDFL43_10072 [Hoeflea phototrophica DFL-43]
 gi|162283289|gb|EDQ33575.1| hypothetical protein HPDFL43_10072 [Hoeflea phototrophica DFL-43]
          Length = 206

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 51/168 (30%), Gaps = 41/168 (24%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R     ++   +  ++++     L  V      +   + VGR    T    ++I R    
Sbjct: 59  RKMISFKENHPVGTIIIDTSDRRLYHVTKPGKAMAYGIGVGREG-FTWQGKNKITRKAEW 117

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P+ +  +      R  P Y+                                   
Sbjct: 118 PGWTPPQVMRDRVKRQEGRVLPAYM----------------------------------P 143

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +   S    Y +H T +P      +   +SGC+R+ N
Sbjct: 144 GGPDNPLGARAMYIGS--TIYRIHGTNQPWTIGQAM---SSGCIRMAN 186


>gi|23499946|ref|NP_699386.1| hypothetical protein BRA0184 [Brucella suis 1330]
 gi|161620264|ref|YP_001594150.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163844373|ref|YP_001622028.1| hypothetical protein BSUIS_B0187 [Brucella suis ATCC 23445]
 gi|254691383|ref|ZP_05154637.1| hypothetical protein Babob68_14785 [Brucella abortus bv. 6 str.
           870]
 gi|254699478|ref|ZP_05161306.1| hypothetical protein Bsuib55_01264 [Brucella suis bv. 5 str. 513]
 gi|254706267|ref|ZP_05168095.1| hypothetical protein BpinM_04540 [Brucella pinnipedialis
           M163/99/10]
 gi|254711440|ref|ZP_05173251.1| hypothetical protein BpinB_14537 [Brucella pinnipedialis B2/94]
 gi|254712041|ref|ZP_05173852.1| hypothetical protein BcetM6_01337 [Brucella ceti M644/93/1]
 gi|254715110|ref|ZP_05176921.1| hypothetical protein BcetM_01342 [Brucella ceti M13/05/1]
 gi|254719921|ref|ZP_05181732.1| hypothetical protein Bru83_10324 [Brucella sp. 83/13]
 gi|256014970|ref|YP_003104979.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|256029930|ref|ZP_05443544.1| hypothetical protein BpinM2_04625 [Brucella pinnipedialis
           M292/94/1]
 gi|256256568|ref|ZP_05462104.1| hypothetical protein Babob9C_04235 [Brucella abortus bv. 9 str.
           C68]
 gi|260756996|ref|ZP_05869344.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260882807|ref|ZP_05894421.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261216818|ref|ZP_05931099.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261313712|ref|ZP_05952909.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261319046|ref|ZP_05958243.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261319685|ref|ZP_05958882.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261749931|ref|ZP_05993640.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|265984928|ref|ZP_06097663.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|265986950|ref|ZP_06099507.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|306838509|ref|ZP_07471347.1| Protein YBIS precursor [Brucella sp. NF 2653]
 gi|23463525|gb|AAN33391.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161337075|gb|ABX63379.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163675096|gb|ABY39206.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|255997630|gb|ACU49317.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260677104|gb|EEX63925.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260872335|gb|EEX79404.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260921907|gb|EEX88475.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261292375|gb|EEX95871.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261298269|gb|EEY01766.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261302738|gb|EEY06235.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261739684|gb|EEY27610.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|264659147|gb|EEZ29408.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|264663520|gb|EEZ33781.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306406376|gb|EFM62617.1| Protein YBIS precursor [Brucella sp. NF 2653]
          Length = 244

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|260462669|ref|ZP_05810875.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031575|gb|EEW32845.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 247

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 57/188 (30%), Gaps = 42/188 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            A+  P      + Q+N + +      +       ++++     L  +E      R  V 
Sbjct: 81  AAVQAPAKRVAMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNFLFLIEKNGKARRYGVG 140

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            G+   +      +I      P W  P  +I+++  A  R  P YL              
Sbjct: 141 TGKPGFE-WSGTHKITNKREWPDWRPPAQMIKRE-AAKGRYLPTYLA------------- 185

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                                 G  N + +  +   +     +H T +P          +
Sbjct: 186 ---------------------GGMENPLGARALYLGTTE-YRIHGTNQPWTIG---GAVS 220

Query: 341 SGCVRVRN 348
           SGC+R+RN
Sbjct: 221 SGCIRMRN 228


>gi|297249925|ref|ZP_06933626.1| hypothetical protein BAYG_02699 [Brucella abortus bv. 5 str. B3196]
 gi|297173794|gb|EFH33158.1| hypothetical protein BAYG_02699 [Brucella abortus bv. 5 str. B3196]
          Length = 313

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 182 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 239

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 240 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 265

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 266 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 294


>gi|170726803|ref|YP_001760829.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169812150|gb|ACA86734.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 294

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 12/119 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L + +S   V+ L+E L +   L P   +   F    E AV  FQ + GL   G+V + T
Sbjct: 4   LRIKSSGEEVKSLQELLTVL-HLSP-GPIDGEFGDKTEDAVLQFQEQQGLYADGVVGTIT 61

Query: 162 LEAMNVPVDLRIR---QLQVNLMRIKKL-------LEQKMGLRYVLVNIPAASLEAVEN 210
             A+     +++    Q  V   R+           +      Y+  +   A L   E 
Sbjct: 62  WNALKKAAVVQLDEQNQPSVESDRLMSWQRVAADPYQDGYNRFYLREDAAKAYLRVYEK 120


>gi|253681528|ref|ZP_04862325.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum D str. 1873]
 gi|253561240|gb|EES90692.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum D str. 1873]
          Length = 307

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 28/166 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG++   V+ L+++L   G       L   F    E A+  FQ R+ L   G+V  S
Sbjct: 83  PLKLGSNGNEVKALQQKLNKFGY---KINLDGIFGHSTEIAIYDFQKRNDLARDGIVGKS 139

Query: 161 TLEAMNVPVDLRI--------------RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           TL+ +++    +                    N +  K      +   Y+ VN       
Sbjct: 140 TLKKLDLEPTEKTMYNPKANIFSSVNSSNYFENFINKK--NSNSITDYYIWVNTNTPKTY 197

Query: 207 AVENG----KVGLRSTVIVGRVDRQTPILHSRI-----NRIMFNPY 243
             +      K+       VG+    T      I     + I+ N  
Sbjct: 198 IFKGYNHHWKLIRTLPCTVGKSSTPTIKGTFSIGNKGESFIVRNNP 243


>gi|146338158|ref|YP_001203206.1| putative ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
 gi|146190964|emb|CAL74969.1| conserved hypothetical protein; putative ErfK/YbiS/YcfS/YnhG
           precursor [Bradyrhizobium sp. ORS278]
          Length = 220

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 66/236 (27%), Gaps = 52/236 (22%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             +       QL   L R    L+ +     ++++     L  V  G   LR  V VGR 
Sbjct: 29  APLTGQDEDSQLPDRLRRTIVNLDTREAPGTIIIDTGNTYLYYVLGGGRALRYGVGVGRE 88

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              T      + R    P W  P  +I +                               
Sbjct: 89  G-FTWSGVQSVTRKAEWPDWHPPAQMIARQ------------------------------ 117

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                    P        G  N + +  +   S     +H T +P        F +SGC+
Sbjct: 118 ---------PYLPRFMAGGPGNPLGARAMYLGSSE-YRIHGTNDPTTIGK---FVSSGCI 164

Query: 345 RVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPV-KLAT-----EVPVHFVY 392
           R+ N  + DL   +   T          V      + V  L +      +PV  VY
Sbjct: 165 RLTNEDVSDLFSRVQVGTKVVVLPKSASVQARAAASRVTSLPSGRQAMSLPVAAVY 220


>gi|295103234|emb|CBL00778.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii SL3/3]
          Length = 156

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +     G     P   LH G S  +V+ ++++L   G           + A   +AV+ F
Sbjct: 79  RYTAKHGLKVPYPGIVLHTGASGGTVRLVQQKLNSLG---ERLKDDGKYGAATAAAVQRF 135

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q R+GL   G V  +T E M
Sbjct: 136 QRRNGLTADGSVGCATWEKM 155



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+S   V  ++  L    D      +      F A  + AV+ FQ+++ ++  G V 
Sbjct: 10  LQRGSSGPDVALVQTWLNGVRDACTWYDALKADGKFGASTQRAVQEFQLKNKMNMDGKVG 69

Query: 159 SSTLEAM 165
            +T   +
Sbjct: 70  QNTWNVL 76


>gi|218530824|ref|YP_002421640.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254561810|ref|YP_003068905.1| hypothetical protein METDI3404 [Methylobacterium extorquens DM4]
 gi|218523127|gb|ACK83712.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254269088|emb|CAX25051.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 222

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 51/199 (25%), Gaps = 46/199 (23%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L  +     + +                 + R             ++V+     L  ++ 
Sbjct: 49  LPTANAALPADIPGAPADPLASTVPQMTAIPRDTVPYSGPYAPGTIVVSTTERRLYLIQP 108

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   LR  V VGR    T      +      P W  P  ++++                 
Sbjct: 109 GGEALRYGVGVGRPG-FTWGGTQTVTMKREWPDWRPPSEMLRRR---------------- 151

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEP 329
                                  P+       G  N + +  +   +    Y +H + EP
Sbjct: 152 -----------------------PDLPRYMKGGIENPLGARAMYLGN--TIYRIHGSNEP 186

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     +SGC+R+ N
Sbjct: 187 ETIGT---AVSSGCIRMTN 202


>gi|254702602|ref|ZP_05164430.1| hypothetical protein Bsuib36_01362 [Brucella suis bv. 3 str. 686]
 gi|261753184|ref|ZP_05996893.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261742937|gb|EEY30863.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
          Length = 244

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|73669348|ref|YP_305363.1| hypothetical protein Mbar_A1842 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396510|gb|AAZ70783.1| conserved protein [Methanosarcina barkeri str. Fusaro]
          Length = 306

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+++++ LI      P  G +  F    E AV+ +Q   GL   G++   T
Sbjct: 30  LQRGDRGSAVRKVQQALIFLDFPVPEVGANGIFGGETELAVRSYQESRGLKVDGIIGQET 89

Query: 162 LEAMN 166
           + +++
Sbjct: 90  IGSLD 94


>gi|239833528|ref|ZP_04681856.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821591|gb|EEQ93160.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 255

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 40/185 (21%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A N    +R  Q+    +        K     ++++     L  V++    +R  V VG+
Sbjct: 92  AANPATTVRKHQIDPAYLPQTVSYSGKEKPGTIVIDTGKRFLYLVQSDGKAMRYGVGVGK 151

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               +     RI+R    P W  P+ ++ ++                             
Sbjct: 152 QG-FSWKGSQRISRKAEWPTWTPPKEMMARE----------------------------- 181

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                   +      R + G  N + +  +         +H T +P      +   +SGC
Sbjct: 182 ------RKKGRILPARMEGGINNPLGARALYLG-ATLYRIHGTNQPWTIGKAM---SSGC 231

Query: 344 VRVRN 348
           +R+RN
Sbjct: 232 IRMRN 236


>gi|168182186|ref|ZP_02616850.1| spore-cortex-lytic enzyme [Clostridium botulinum Bf]
 gi|237793523|ref|YP_002861075.1| spore-cortex-lytic enzyme [Clostridium botulinum Ba4 str. 657]
 gi|182674550|gb|EDT86511.1| spore-cortex-lytic enzyme [Clostridium botulinum Bf]
 gi|229262004|gb|ACQ53037.1| spore-cortex-lytic enzyme [Clostridium botulinum Ba4 str. 657]
          Length = 231

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    + +++ +L   G    + G+   F     +AV+ FQ ++GL   G++   TL A
Sbjct: 43  GHRGDIISQVQRKLKAWGYY--NGGVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLAA 100

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + +           N   +  L     G 
Sbjct: 101 LGIKTGSSGSSSSSNNQDVMLLARLINGE 129


>gi|320008650|gb|ADW03500.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces flavogriseus ATCC
           33331]
          Length = 245

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  +SG    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 39  SRTLSSGATGADVTQLQIR--VSGYPGYNSVLAVDGSYGPATTAAVKRFQAAYGLTADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATFTKL 105


>gi|254504310|ref|ZP_05116461.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222440381|gb|EEE47060.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 218

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 71/219 (32%), Gaps = 57/219 (26%)

Query: 150 GLDPSGMVDSSTLEAMN----------VPVDLRIRQLQVNLM-------RIKKLLEQKMG 192
           GL  SG V ++T  A               + R     +NL        R +        
Sbjct: 18  GLAVSGCVSTTTQPAAPPVSPYLSMYRAMPEERFPIPAINLNKVPERYYRKQVRYNTPER 77

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
           +  ++V+     L  V+   + +R  V +GR   +     +RI R    P WV P  +IQ
Sbjct: 78  VGTLIVDTSNYYLYLVQENGMAMRYGVGLGRAGFE-WSGRARIARKAPWPRWVPPEEMIQ 136

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           ++                             E   W+           DPG  N + +  
Sbjct: 137 RE----------------------------PELEQWSWKNGGM-----DPGLENPLGARA 163

Query: 313 IEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           +     + +  Y +H T E     +     +SGCVRV N
Sbjct: 164 LYIYQGNVDTLYRIHGTAEYWTIGS---AVSSGCVRVMN 199


>gi|182435141|ref|YP_001822860.1| putative amidase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178463657|dbj|BAG18177.1| putative amidase [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 519

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 16/133 (12%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG-----WPEL 97
                V    +    +      S  P           +A    + + + G      W  L
Sbjct: 391 PQVKAVQTLLNAQGYQAGAADGSFGPTTKGAV-----QAFQRARALEADGTVGPKTWTAL 445

Query: 98  ----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
                   L  G S  +V+RL+  L  +  L  + G   +F    E+AV+ +Q    L  
Sbjct: 446 LSAGTTPALAKGASGDAVKRLQRALTAA--LGTTVGADGSFGPATETAVRTYQTGRKLSV 503

Query: 154 SGMVDSSTLEAMN 166
            G V  +T  A+ 
Sbjct: 504 DGKVGPATWGALQ 516



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  L   G    +     +F    + AV+ FQ    L+  G V   T  A
Sbjct: 387 GSTGPQVKAVQTLLNAQGY--QAGAADGSFGPTTKGAVQAFQRARALEADGTVGPKTWTA 444

Query: 165 M 165
           +
Sbjct: 445 L 445


>gi|256370856|ref|YP_003108680.1| Peptidoglycan-binding domain 1 protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256007440|gb|ACU53007.1| Peptidoglycan-binding domain 1 protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 323

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +P   L  G  S  V+ L  RL   G       +   FD  V  A+  FQ R GL  +G+
Sbjct: 1   MPFVSLRGGERSERVEDLCRRLRRLGF---ELEVRDEFDDEVAEAIVAFQRRRGLPETGV 57

Query: 157 VDSSTLEAM 165
           VD  T  A+
Sbjct: 58  VDLVTWRAV 66



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 17/102 (16%)

Query: 81  AIAFYQDILSRG-----GWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLD 125
           A    + +   G      W  +      +G+              V  L+ +L   G   
Sbjct: 45  AFQRRRGLPETGVVDLVTWRAVVEAGFRIGDRLLYLKRPALRGDDVAWLQGKLGSLGF-- 102

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               +   F     SA+  FQ   GL   GM  ++T+E +  
Sbjct: 103 DPGRVDGIFGPRTRSALMEFQANMGLPADGMCGAATIEELRR 144


>gi|188993784|ref|YP_001905794.1| peptidoglycan-binding protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735544|emb|CAP53759.1| peptidoglycan-binding protein [Xanthomonas campestris pv.
           campestris]
          Length = 616

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDP-SGMV 157
           L  G+SS  V++L   L   G    +     +   FDA  + AV+ FQ  +GL    G  
Sbjct: 306 LKEGSSSREVRKLESNLSALGYTASNGDAFQMDQKFDASTKQAVEAFQHANGLTTVDGKA 365

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRI 183
             +TL A+    D + R LQ NL+ +
Sbjct: 366 GPATLRAI----DQQARSLQSNLIEL 387



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 3/80 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSG 155
             P  L       + L+  LI  G          +          AV  FQ  +GL  +G
Sbjct: 365 AGPATLRAIDQQARSLQSNLIELGFTGTDNKPLSVDGYLGNGTRQAVIAFQEANGLPATG 424

Query: 156 MVDSSTLEAMNVPVDLRIRQ 175
           + D  TL+++      R + 
Sbjct: 425 VADKGTLDSLAQQAAQRSQT 444


>gi|282848940|ref|ZP_06258329.1| 3D domain protein [Veillonella parvula ATCC 17745]
 gi|282581215|gb|EFB86609.1| 3D domain protein [Veillonella parvula ATCC 17745]
          Length = 202

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKHQGFLHDS--IDGIYGHNTEQAVRKFQKSKGLPVDGRVG 81

Query: 159 SSTLEAMNV 167
            +T+ A+  
Sbjct: 82  PATMNALEK 90


>gi|301064267|ref|ZP_07204710.1| putative secretion ATPase, PEP-CTERM locus family protein [delta
           proteobacterium NaphS2]
 gi|300441712|gb|EFK06034.1| putative secretion ATPase, PEP-CTERM locus family protein [delta
           proteobacterium NaphS2]
          Length = 521

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S +V  L+E L   G L     L+  FD      VK FQ   GL+  G+V   T
Sbjct: 450 LKQGMRSPAVFTLQEILKDLGYL---VTLNGNFDQQTLEEVKRFQDEFGLEADGVVGFRT 506

Query: 162 L 162
           L
Sbjct: 507 L 507


>gi|254514047|ref|ZP_05126108.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
 gi|219676290|gb|EED32655.1| general secretion pathway protein A [gamma proteobacterium NOR5-3]
          Length = 563

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 94  WPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P   R L LG+S   V+R+ E L    D  P       FDA +E  VKLFQ + GL
Sbjct: 463 WRPSPGVLRTLQLGDSGEDVRRVAE-LFARLDRQPKPLTESLFDARLEQRVKLFQQQQGL 521

Query: 152 DPSGMVDSSTLEAMNVPVDL 171
              G++  +TL A+++ V  
Sbjct: 522 RADGVLGENTLRALSLSVGD 541


>gi|212638810|ref|YP_002315330.1| erfK/srfK family protein [Anoxybacillus flavithermus WK1]
 gi|212560290|gb|ACJ33345.1| Uncharacterized erfK/srfK family protein, probably secreted
           [Anoxybacillus flavithermus WK1]
          Length = 167

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 22/121 (18%)

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNN-----IHMIDEKGKEVFVEEVDWNSPEPPN 295
           NP    P  I+ K      + +      +        +   K   +  E +   + +  N
Sbjct: 20  NPRVGDPMIIVNK------QTNQLAFIRHGKIERIYRVATGKTNVLTPEGLFTVTVKAVN 73

Query: 296 FIFRQD--PG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
             +R+   PG    N + +  I F           +H T  P       R+ T GCVR+ 
Sbjct: 74  PYYRKKNIPGGAPNNPLGTRWIGFDARGTDGRTYGIHGTNRPESIG---RYITEGCVRMH 130

Query: 348 N 348
           N
Sbjct: 131 N 131


>gi|149915748|ref|ZP_01904273.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. AzwK-3b]
 gi|149810330|gb|EDM70175.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. AzwK-3b]
          Length = 184

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 10/93 (10%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPI 330
                + +  +   +   +  ++   Q  G  N + +  +  F +  +TY  +H T  P 
Sbjct: 93  WRPTDEMIERDPSAYGRFKGNDY--VQPGGPENPLGARALYLFQNGRDTYFRIHGTNAPR 150

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                 R  ++GC+R+   ++ DL   +   T 
Sbjct: 151 SIG---RSVSNGCIRMLNEHVQDLYERVPVGTV 180


>gi|159901702|ref|YP_001547948.1| N-acetylmuramoyl-L-alanine amidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894741|gb|ABX07820.1| N-acetylmuramoyl-L-alanine amidase family 2 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 356

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 25/166 (15%)

Query: 16  VYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
            Y +LP   + VE  +    +  +             +     +       +        
Sbjct: 202 FYSLLPQLRAAVETHLAGGNVGRMWPTLKR-------NTPATSLAKTAQYLLRTHGASIT 254

Query: 76  A------QTEKAIAFYQ--------DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIIS 121
           A       TE A+  +Q         I+    W  L  R + LG+S  +V+ ++ RL   
Sbjct: 255 ADGAFGPATEAAVKAFQTAKGLTVNGIIGAATWESLI-RTVRLGDSGDAVRAVQTRLAAQ 313

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           G    +      F A + + VK FQ    L   G+V  ++   + +
Sbjct: 314 GY---TTTSDGQFTATLNALVKTFQTNRQLSVDGVVGINSWNHLAM 356



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            S     AF    E+AVK FQ   GL  +G++ ++T E++   V 
Sbjct: 251 ASITADGAFGPATEAAVKAFQTAKGLTVNGIIGAATWESLIRTVR 295


>gi|150395622|ref|YP_001326089.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150027137|gb|ABR59254.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 228

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 42/172 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R K           ++V+  +  L  ++      R  + VGR D        ++ R  
Sbjct: 52  YWRTKVRFRTDEAPGTIIVDTNSKYLYYIDGRNRATRYGIGVGR-DGFGWSGVVKVGRKA 110

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  +  ++                                     +       
Sbjct: 111 EWPSWTPPAEMRVRE-----------------------------------RAKGRILPIT 135

Query: 300 QDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           Q  G  N + +  +      R+  + +H T +P      +   +SGC+R+ N
Sbjct: 136 QPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNM---SSGCIRMMN 184


>gi|295101500|emb|CBK99045.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 717

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 5/125 (4%)

Query: 44  YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
           +    N   D  + R      S I  +S + +A+       +   LS G W       L 
Sbjct: 214 FQRQFNLTADGVVGRSTWYKISYI-YVSVKDLAELTSEGETFSGTLSDGSW-NFGSSVLK 271

Query: 104 LGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            G++   V++++  L      +   PS  +   + +   +AV+ FQ R+GL   G+V  +
Sbjct: 272 QGSTGSKVEQMQFWLSTLAQYESSIPSVTVDGVYGSGTAAAVRAFQRRYGLTVDGIVGRT 331

Query: 161 TLEAM 165
           T   +
Sbjct: 332 TWTEL 336



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 77/228 (33%), Gaps = 25/228 (10%)

Query: 22  MGLSLVEKPIHASVLDEI------INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
            G S++++    S ++++      + +   SI +   D                  +   
Sbjct: 265 FGSSVLKQGSTGSKVEQMQFWLSTLAQYESSIPSVTVDGVYGSGTAAAVRAF----QRRY 320

Query: 76  AQTEKAIA----------FYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLR--ERLIISG 122
             T   I            ++ I S  G P   P   L  G+S  +V+ ++   ++  + 
Sbjct: 321 GLTVDGIVGRTTWTELYDQFRSIQSDNGIPNAYPGTALRQGSSGQNVRLVQFWLKIARTV 380

Query: 123 DLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNL 180
                +  +   F +   +AV+ FQ   GL   G+V  +T   +  V  D+  R L  +L
Sbjct: 381 YSSLNNVTVDGIFGSSTTAAVRRFQTYFGLTSDGVVGRTTWNKLYEVYNDIANRLLSPSL 440

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              +     + G     V      L  +   +  + S  I GR    T
Sbjct: 441 RPGEYPGVLRNGSTGTAVRELQFYLYLMSAYQSSIPSVSIDGRFGAAT 488



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 9/133 (6%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDILSRGGWPELPI 99
              +  V+  F +          +   + S   + +T   K    Y DI +R   P L  
Sbjct: 383 SLNNVTVDGIFGSSTTAAVRRFQTYFGLTSDGVVGRTTWNKLYEVYNDIANRLLSPSLRP 442

Query: 100 R----PLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                 L  G++  +V+ L+  L +        PS  +   F A  E+AV+ +Q   GL 
Sbjct: 443 GEYPGVLRNGSTGTAVRELQFYLYLMSAYQSSIPSVSIDGRFGAATEAAVRAYQRFAGLT 502

Query: 153 PSGMVDSSTLEAM 165
             G+V   T +++
Sbjct: 503 VDGIVGRKTWDSL 515



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G++  +V  L+ +L  I+ D        +   F   +   VK FQ +  L   
Sbjct: 164 PGSPLRQGSTGAAVFTLQRQLNRITKDYPFLGLLTVDGIFGRKMTETVKKFQRQFNLTAD 223

Query: 155 GMVDSSTLEAMN 166
           G+V  ST   ++
Sbjct: 224 GVVGRSTWYKIS 235



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 9/82 (10%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRL------RERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G  P+ P R +  G+    V+ +      R +L    D          F     +AVK  
Sbjct: 626 GQGPDYPDRAMKEGSVGADVRLIEGWLNDRSQLYCEEDYVADNAS---FGPEDTAAVKET 682

Query: 146 QMRHGLDPSGMVDSSTLEAMNV 167
           Q R GL+P+G+VD  T  A+  
Sbjct: 683 QQRAGLEPNGVVDRPTWAALRA 704



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 81/258 (31%), Gaps = 58/258 (22%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIV--NDRFDNFLAR 58
           +VG    NK+   +       +   L+   +       ++            +F  +L  
Sbjct: 415 VVGRTTWNKLYEVYN-----DIANRLLSPSLRPGEYPGVLRNGSTGTAVRELQFYLYLMS 469

Query: 59  VDMGIDSDIPIISKETI--AQTEKAIAFYQD--------ILSRGGWPEL----------- 97
                 S IP +S +    A TE A+  YQ         I+ R  W  L           
Sbjct: 470 ---AYQSSIPSVSIDGRFGAATEAAVRAYQRFAGLTVDGIVGRKTWDSLYGKASALRSSG 526

Query: 98  ----------PIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
                     P  PL +G  S +V     L +R+    D   S  LS  +     +A   
Sbjct: 527 PVVTLKRLPYPGTPLTVGTDSSAVLYYTLLLQRIAYYYDSVASPALSSQYTQETANATAS 586

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
            Q   GL  +G+ D+ T  A+          L + L       ++  G        P   
Sbjct: 587 AQELLGLPATGVADAETWTAVEA--------LSLQLAAFTPNPDRHPGQ------GPDYP 632

Query: 205 LEAVENGKVGLRSTVIVG 222
             A++ G VG    +I G
Sbjct: 633 DRAMKEGSVGADVRLIEG 650


>gi|148378207|ref|YP_001252748.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 3502]
 gi|153930851|ref|YP_001382608.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 19397]
 gi|153935278|ref|YP_001386160.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. Hall]
 gi|153939602|ref|YP_001389567.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. Langeland]
 gi|170755801|ref|YP_001779835.1| spore-cortex-lytic enzyme [Clostridium botulinum B1 str. Okra]
 gi|170758560|ref|YP_001785532.1| spore-cortex-lytic enzyme [Clostridium botulinum A3 str. Loch
           Maree]
 gi|148287691|emb|CAL81756.1| spore cortex-lytic enzyme precursor [Clostridium botulinum A str.
           ATCC 3502]
 gi|152926895|gb|ABS32395.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. ATCC 19397]
 gi|152931192|gb|ABS36691.1| spore-cortex-lytic enzyme [Clostridium botulinum A str. Hall]
 gi|152935498|gb|ABS40996.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. Langeland]
 gi|169121013|gb|ACA44849.1| spore-cortex-lytic enzyme [Clostridium botulinum B1 str. Okra]
 gi|169405549|gb|ACA53960.1| spore-cortex-lytic enzyme [Clostridium botulinum A3 str. Loch
           Maree]
 gi|295317664|gb|ADF98041.1| spore-cortex-lytic enzyme [Clostridium botulinum F str. 230613]
 gi|322804472|emb|CBZ02022.1| spore cortex-lytic enzyme, lytic transglycosylase SleB [Clostridium
           botulinum H04402 065]
          Length = 231

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    + +++ +L   G    + G+   F     +AV+ FQ ++GL   G++   TL A
Sbjct: 43  GHRGDIISQVQRKLKAWGYY--NGGVDGIFGHQTYTAVRYFQSKNGLTVDGIIGDKTLVA 100

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           + +           N   +  L     G 
Sbjct: 101 LGINTGSSGSSSSSNNQDVMLLARLINGE 129


>gi|256059581|ref|ZP_05449780.1| hypothetical protein Bneo5_04410 [Brucella neotomae 5K33]
 gi|261323549|ref|ZP_05962746.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261299529|gb|EEY03026.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
          Length = 244

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|288554519|ref|YP_003426454.1| putative spore cortex-lytic enzyme precursor [Bacillus pseudofirmus
           OF4]
 gi|288545679|gb|ADC49562.1| putative spore cortex-lytic enzyme precursor [Bacillus pseudofirmus
           OF4]
          Length = 207

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++S  V+ L+++LI    LD        +    + AV+ FQ   GL   G+   +T
Sbjct: 31  LKQGDTSAEVEELQKQLIQLDYLDTDAT--GYYGPQTDQAVRNFQSDFGLVVDGLAGVAT 88


>gi|221309274|ref|ZP_03591121.1| hypothetical protein Bsubs1_07796 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221318523|ref|ZP_03599817.1| hypothetical protein BsubsJ_07666 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322797|ref|ZP_03604091.1| hypothetical protein BsubsS_07777 [Bacillus subtilis subsp.
           subtilis str. SMY]
          Length = 159

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             +     +    + +  P L + +   + +  P    P +I     +++  +      +
Sbjct: 8   NSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLN 67

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P    +I  +         +  +    ++   +H T  
Sbjct: 68  NRVM----KTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQH-YGIHGTNN 122

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           P          + GC+R+ N  +I+L   +   T
Sbjct: 123 PASIGK---AVSKGCIRMHNKDVIELASIVPNGT 153


>gi|312142018|ref|YP_004009354.1| n-acetylmuramoyl-l-alanine amidase cwlm [Rhodococcus equi 103S]
 gi|325677534|ref|ZP_08157198.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus equi ATCC 33707]
 gi|311891357|emb|CBH50678.1| N-acetylmuramoyl-L-alanine amidase cwlM [Rhodococcus equi 103S]
 gi|325551781|gb|EGD21479.1| N-acetylmuramoyl-L-alanine amidase [Rhodococcus equi ATCC 33707]
          Length = 400

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 14/79 (17%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL--------------DPSKGLSVAFDAYVESAVKLFQM 147
           L  G+   +V  +R  L   G L                       FD +++SAV+ FQ 
Sbjct: 4   LRHGDHGPAVAEIRGTLTGLGFLHNGVAETQRESVNGSHWVSPDAMFDHHLDSAVRAFQQ 63

Query: 148 RHGLDPSGMVDSSTLEAMN 166
           + GL   G+V  +T  ++ 
Sbjct: 64  QRGLLVDGIVGPATYRSLK 82



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 18/146 (12%)

Query: 29  KPIHASVLDEIINESYHSIV---NDRFDNFLARVDMGIDSDIPII-----SKETIAQTEK 80
             +H  V +        S     +  FD+ L            ++        T    ++
Sbjct: 24  GFLHNGVAETQRESVNGSHWVSPDAMFDHHLDSAVRAFQQQRGLLVDGIVGPATYRSLKE 83

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           A   Y+ + +R    +L             V  L+ RL   G       +   F      
Sbjct: 84  A--SYR-LGARTLIYQLSAPLY-----GDDVAALQTRLQDLGFYV--GRVDGYFGPKTHE 133

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMN 166
           A+  FQ   G+   G+   +TL ++ 
Sbjct: 134 ALSSFQREIGIAADGICGPATLRSLE 159


>gi|220926348|ref|YP_002501650.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219950955|gb|ACL61347.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 274

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 64/189 (33%), Gaps = 39/189 (20%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R ++     +R +     +     V+++  A  L  V+ G    R  V VGR     
Sbjct: 106 PAFRWQRANPVFLRQEVAYGGRYEPGTVVIDPRARHLYLVQPGGQARRYGVGVGRQGFA- 164

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + IN     P W  P+ +I +     L +    L+                     
Sbjct: 165 WSGVATINSKQAWPDWYPPKEMIARQ--PDLARQVSQLQSG------------------- 203

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +  +  +++  Y +H T EP       R  +SGC+R
Sbjct: 204 ---------LGVPGGPRNPLGARAMYLWQNNKDTLYRIHGTTEPETIG---RSVSSGCIR 251

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 252 MINQDVIDL 260


>gi|304391767|ref|ZP_07373709.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303295996|gb|EFL90354.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 267

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 56/182 (30%), Gaps = 47/182 (25%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             R +  Q   +R +   +       ++V+  +  L  V      +R  V VG+      
Sbjct: 111 AARAKLYQRTAVRYRTREKAGT----IIVDTGSKHLYHVLGNGRAMRYGVAVGKAG-FGW 165

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              +RI R    P W  P S+I++                                  W 
Sbjct: 166 KGSARIKRKAKWPTWTPPASMIKRK----------------------------PHLAKWR 197

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           +         Q  G  N + +  +      R+  Y +H T  P          +SGCVR+
Sbjct: 198 NG--------QPGGPANPLGAAALYLYQGKRDTLYRIHGTNNPASIGT---ASSSGCVRL 246

Query: 347 RN 348
           RN
Sbjct: 247 RN 248


>gi|186682281|ref|YP_001865477.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464733|gb|ACC80534.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 155

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+  L+ G+S ++V+ L+  L+ +G       +   + A  E+AVK FQ +  L   G+V
Sbjct: 89  PMPTLYFGSSGLAVRVLQRLLVANGYAVR---VDGIYGALTETAVKAFQNQQNLGTDGIV 145

Query: 158 DSSTLEAMNV 167
              T  A+  
Sbjct: 146 GQRTWRALTT 155


>gi|303239802|ref|ZP_07326326.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
 gi|302592739|gb|EFL62463.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
          Length = 123

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 4/47 (8%)

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                  +  +     +  Y +H T +P          + GCVR+ N
Sbjct: 61  NPGGPFGARWLGLSIPSGGYGIHGTNDPSSIGK---AVSHGCVRMHN 104


>gi|282852054|ref|ZP_06261412.1| C-terminal processing peptidase [Lactobacillus gasseri 224-1]
 gi|282556814|gb|EFB62418.1| C-terminal processing peptidase [Lactobacillus gasseri 224-1]
          Length = 454

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L     ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 365 LKRSMTGVDVATLQQYLTALGYLPK--HVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 422

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 423 QAQLYLAVAQKLQDDNPALKKALSLNLKDMED 454


>gi|116629567|ref|YP_814739.1| periplasmic protease [Lactobacillus gasseri ATCC 33323]
 gi|311110789|ref|ZP_07712186.1| carboxy- processing proteinase [Lactobacillus gasseri MV-22]
 gi|116095149|gb|ABJ60301.1| Periplasmic protease [Lactobacillus gasseri ATCC 33323]
 gi|311065943|gb|EFQ46283.1| carboxy- processing proteinase [Lactobacillus gasseri MV-22]
          Length = 482

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G L     ++  FD   ++AV  FQ  H L   G+V+   
Sbjct: 393 LKRSMTGVDVATLQQYLTALGYLPK--HVTGVFDDETKNAVIKFQKEHDLTTDGIVNGQV 450

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  + M  
Sbjct: 451 QAQLYLAVAQKLQDDNPALKKALSLNLKDMED 482


>gi|222084984|ref|YP_002543513.1| hypothetical protein Arad_1041 [Agrobacterium radiobacter K84]
 gi|221722432|gb|ACM25588.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 253

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 43/144 (29%), Gaps = 40/144 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V +G    R  V VG+   +       + R    P W  PR ++ ++          
Sbjct: 131 LYLVMDGGQARRYGVGVGKPGFE-WAGAHTVTRKQEWPDWTPPREMVVRE---------- 179

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                +                            R D G+ N + +  +         +H
Sbjct: 180 -AAKGHY------------------------LPARMDGGEANPLGARAMYLG-STLYRIH 213

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T  P    +     +SGC+R+RN
Sbjct: 214 GTNAPWSIGS---AVSSGCIRLRN 234


>gi|302553721|ref|ZP_07306063.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
 gi|302471339|gb|EFL34432.1| lipoprotein [Streptomyces viridochromogenes DSM 40736]
          Length = 283

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 5/151 (3%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           P R L   G++   V+ L+ RL     L    G +  +D   E AV  FQ + GL  +G 
Sbjct: 73  PARVLWSRGDTGRDVRELQARLRQVAWL--FDGPTGTYDDRTERAVSGFQGKRGLPRTGR 130

Query: 157 VDSSTLEAMNVPVDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            D+ T + +        R     +          + M  R + ++  + +L  + +G+  
Sbjct: 131 TDTVTWQRLRGMTREPGRWDLYLMGGQPADPPDARCMTGRVLCIDKTSRTLRWMIDGRTV 190

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
               V  G     T      +     +    
Sbjct: 191 STVAVRFGSQYTPTREGVFSVYWKSRDHVST 221


>gi|239981165|ref|ZP_04703689.1| hypothetical protein SalbJ_17134 [Streptomyces albus J1074]
          Length = 305

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 8/86 (9%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGWP      L  G S  +V  ++  +   G           + +   +AVK F
Sbjct: 168 RGVDLGGGWPR-----LDPGASGATVVVVQRLMTQRG---HQLVADGQYGSVSVAAVKKF 219

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q   GL   G V  +T   + + +  
Sbjct: 220 QAAQGLVADGQVGPATWPKLVLTLRQ 245



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 30/161 (18%)

Query: 16  VYLILPMGLSLVEK--PIHASVLDEIINESYH----SIVNDRFDNFLARVDMGIDSDIPI 69
           V  +   G+ L      +        +                D     V +        
Sbjct: 162 VAFMAARGVDLGGGWPRLDPGASGATVVVVQRLMTQRGHQLVADGQYGSVSVAAV----- 216

Query: 70  ISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
                     K     Q +++ G      WP+L +  L  G+S   V  L+  L      
Sbjct: 217 ----------KKFQAAQGLVADGQVGPATWPKLVL-TLRQGSSGQQVSALQTALNRR--- 262

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  +F +   +AV+ +Q  + L   G     T  A+
Sbjct: 263 SAGLVVDGSFGSVTTTAVRAYQSLNRLVVDGEAGPVTWRAL 303


>gi|323705059|ref|ZP_08116635.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535485|gb|EGB25260.1| NLP/P60 protein [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 226

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G    + G+   F +  +SAV   Q R+GL P G+V  +T
Sbjct: 28  LKYGSKGQAVVSLQQTLNRLGY--STGGIDGIFGSKTKSAVIALQRRYGLSPDGIVGPAT 85

Query: 162 LEAMNVP 168
              +N  
Sbjct: 86  EAVLNRT 92


>gi|326383899|ref|ZP_08205583.1| cell wall hydrolase/autolysin [Gordonia neofelifaecis NRRL B-59395]
 gi|326197358|gb|EGD54548.1| cell wall hydrolase/autolysin [Gordonia neofelifaecis NRRL B-59395]
          Length = 383

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 12/79 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV------------AFDAYVESAVKLFQM 147
           + L LG+   +V  +R  L   G L  +                  FD   + AV+ FQ 
Sbjct: 2   QVLRLGDHGSAVAEIRAILATRGLLPAAPSTPPSTTHTPWSPPEAVFDQACDRAVRAFQQ 61

Query: 148 RHGLDPSGMVDSSTLEAMN 166
             GL   G+V  +T  A+ 
Sbjct: 62  ERGLIVDGLVGYATYTALR 80



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 44/158 (27%), Gaps = 24/158 (15%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA-----QTEKAIAFY 85
           +        + E    +                 +  P    E +      +  +A    
Sbjct: 4   LRLGDHGSAVAEIRAILATRGLLPAAPSTP-PSTTHTPWSPPEAVFDQACDRAVRAFQQE 62

Query: 86  QDILSRG-----GWPELPIRPLHLG-----------NSSVSVQRLRERLIISGDLDPSKG 129
           + ++  G      +  L      LG            +   V  L+ RL   G       
Sbjct: 63  RGLIVDGLVGYATYTALREASYRLGARILLYRLSAPMTGDDVATLQSRLQNLGYYH--GL 120

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +   F     SAV L+Q  +GL   G+   STL ++  
Sbjct: 121 VDGVFGEGTHSAVCLYQTEYGLSSDGICGPSTLRSLER 158


>gi|16078468|ref|NP_389287.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|81342402|sp|O34816|YKUD_BACSU RecName: Full=Putative L,D-transpeptidase YkuD; AltName: Full=Spore
           protein YkuD
 gi|2632225|emb|CAA10867.1| YkuD protein [Bacillus subtilis]
 gi|2633775|emb|CAB13277.1| murein transglycosylase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 164

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             +     +    + +  P L + +   + +  P    P +I     +++  +      +
Sbjct: 13  NSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLN 72

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P    +I  +         +  +    ++   +H T  
Sbjct: 73  NRVM----KTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQH-YGIHGTNN 127

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           P          + GC+R+ N  +I+L   +   T
Sbjct: 128 PASIGK---AVSKGCIRMHNKDVIELASIVPNGT 158


>gi|150017149|ref|YP_001309403.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB
           8052]
 gi|149903614|gb|ABR34447.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium beijerinckii NCIMB
           8052]
          Length = 230

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 13/84 (15%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNN 334
             GK+     V             +         +  I        Y +H T +P    +
Sbjct: 67  ASGKQETPSPVGTWK-------VVRMAKWSGGFGTRWIGLNVPWGIYGIHGTNKPYSIGS 119

Query: 335 VVRFETSGCVRVRN--IIDLDVWL 356
                + GC+R+RN  I +L  ++
Sbjct: 120 E---ASHGCIRMRNKDIEELYEYV 140



 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++ ++   G    +  L   +   ++  V  F+  + L     ++   
Sbjct: 163 LKPGDRGADVLEVQRKMKEKGYYPKN--LDGIYGEGMKLYVIKFRKENNLKECHDINKEF 220

Query: 162 LEAMNVP 168
            E + + 
Sbjct: 221 YEKLGIT 227


>gi|291545287|emb|CBL18396.1| Putative peptidoglycan binding domain [Ruminococcus sp. 18P13]
          Length = 272

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   +  G     V+ ++ +L+  G       ++ AFD     AV+ FQ+   +   G+V
Sbjct: 206 PTDTVKPGAEGEDVKWIQWQLVRQG---AELEITGAFDEDTRQAVQAFQIDRDMKADGIV 262

Query: 158 DSSTLEAMN 166
              T E + 
Sbjct: 263 GEETREKLG 271


>gi|291298964|ref|YP_003510242.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
 gi|290568184|gb|ADD41149.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
          Length = 242

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G     V++L+ R  ++G         L   F A  ESAVK FQ  +GL   G+
Sbjct: 37  DRKLKKGMKGNDVKQLQIR--VAGYPGYGNILSLDGEFGARTESAVKRFQKAYGLAADGV 94

Query: 157 VDSSTLEAM 165
             S T   +
Sbjct: 95  AGSRTFRKI 103


>gi|300856423|ref|YP_003781407.1| N-acetylmuramoyl-L-alanine amidase [Clostridium ljungdahlii DSM
           13528]
 gi|300436538|gb|ADK16305.1| N-acetylmuramoyl-L-alanine amidase [Clostridium ljungdahlii DSM
           13528]
          Length = 226

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P  P+    G    +V+ ++E+L+  G      G    F      AVK FQ  +GL   G
Sbjct: 155 PGYPIRMNPGLEDSNVKAVQEKLMSRGYSVGRCGADGFFGWGTLEAVKSFQRDNGLAVDG 214

Query: 156 MVDSSTLEAM 165
           +V  +T   +
Sbjct: 215 IVGVNTWNKL 224


>gi|284041692|ref|YP_003392032.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283945913|gb|ADB48657.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 447

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G+    V++L+  L +             F    + A++ FQ RHGLD  G+ 
Sbjct: 105 PRVALEKGDRGRQVKQLQRALGV--------HADGIFGPGTKKALRKFQARHGLDVDGVA 156

Query: 158 DSSTLEAMNV 167
            S+T  A+  
Sbjct: 157 GSATWSALKR 166



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                F      A++ FQ RHGLD  G+V  +T  A+ 
Sbjct: 200 PADGVFGPQSIKALRKFQDRHGLDVDGVVGPATWSALK 237



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V  L+  L I             F    E+AVK +Q   GL+  G+   +T +A+ +
Sbjct: 257 GSGVAALQRALGI--------AADGEFGPGTEAAVKRYQASRGLEADGVAGPATRDALGL 308

Query: 168 PVDLRIR 174
                ++
Sbjct: 309 GDGPVLK 315


>gi|255283883|ref|ZP_05348438.1| spore cortex-lytic enzyme SleC [Bryantella formatexigens DSM 14469]
 gi|255265604|gb|EET58809.1| spore cortex-lytic enzyme SleC [Bryantella formatexigens DSM 14469]
          Length = 413

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 11/94 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIIS--GD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S  +V++++E+L        L P   +   F    E+AVK+FQ   GL   
Sbjct: 328 PGYALRIGSSGDAVRQIQEQLNAISNNYPLIPKIAVDGIFGPATENAVKVFQSVFGLTQD 387

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           G+V   T          RI+ + V + RI +L  
Sbjct: 388 GIVGRRTWY--------RIQDIYVAVTRIAELYP 413


>gi|325926234|ref|ZP_08187591.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
 gi|325543353|gb|EGD14779.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas perforans 91-118]
          Length = 343

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G     V++L+ +L   G +            F    + AV+ FQ  HGL   G
Sbjct: 211 DGKLEQGERGEQVKQLQGQLAQLGAVGRDGKPLRADGDFGGNTKYAVEQFQREHGLQIDG 270

Query: 156 MVDSSTLEAMNV 167
           +    T  A+  
Sbjct: 271 VAGQQTQAALAK 282


>gi|296330534|ref|ZP_06873012.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305674583|ref|YP_003866255.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152216|gb|EFG93087.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412827|gb|ADM37946.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 325

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             P+  G+    V+++++ L            + G+   +     +AVK FQ  HGL   
Sbjct: 253 TSPMRKGD---DVRQIQKALAALYFYPDKGAKNNGIDGVYGPKTANAVKRFQSMHGLTAD 309

Query: 155 GMVDSSTLEAMNV 167
           G+    T   +  
Sbjct: 310 GIYGPKTKAKLEA 322


>gi|221313601|ref|ZP_03595406.1| hypothetical protein BsubsN3_07732 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
          Length = 167

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 52/154 (33%), Gaps = 12/154 (7%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             +     +    + +  P L + +   + +  P    P +I     +++  +      +
Sbjct: 16  NSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLN 75

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P    +I  +         +  +    ++   +H T  
Sbjct: 76  NRVM----KTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSKQH-YGIHGTNN 130

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           P          + GC+R+ N  +I+L   +   T
Sbjct: 131 PASIGK---AVSKGCIRMHNKDVIELASIVPNGT 161


>gi|66768719|ref|YP_243481.1| hypothetical protein XC_2411 [Xanthomonas campestris pv. campestris
            str. 8004]
 gi|66574051|gb|AAY49461.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris
            str. 8004]
          Length = 1264

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 5/88 (5%)

Query: 95   PELPIRP--LHLGNSSVSVQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            P +      L LG+    V+ L+ RL      G    +      +    E AV+ FQ   
Sbjct: 939  PPVSSEVEGLRLGDRGQEVEFLQYRLQQIDARGPNGQAVPQDGHYGPETEHAVRQFQQDQ 998

Query: 150  GLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            GL  +G+       A++     R   L+
Sbjct: 999  GLPATGVAGPDLDAALSQTQHARREALK 1026


>gi|153214514|ref|ZP_01949423.1| general secretion pathway protein A [Vibrio cholerae 1587]
 gi|124115316|gb|EAY34136.1| general secretion pathway protein A [Vibrio cholerae 1587]
          Length = 529

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQKAPSLK 526


>gi|331271040|ref|YP_004385751.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           BKT015925]
 gi|329127432|gb|AEB77376.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           BKT015925]
          Length = 304

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  + L   G+V
Sbjct: 168 SSGLLKIGSKEDKVKQLQANLNKLGYTCGNA--DGIFGQETKNAVISFQRNNELSADGIV 225

Query: 158 DSSTLEAMNVPVDLR 172
             ST   +   ++ R
Sbjct: 226 GQSTWNKILSNLEDR 240


>gi|303239381|ref|ZP_07325909.1| peptidase M14 carboxypeptidase A [Acetivibrio cellulolyticus CD2]
 gi|302593167|gb|EFL62887.1| peptidase M14 carboxypeptidase A [Acetivibrio cellulolyticus CD2]
          Length = 423

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L LG++  +V+ ++  L   G    +  +        + A+K FQ  +GL P G+V  
Sbjct: 2   ETLTLGSTGPNVKLIQSLLNRIGY--NAGPVDGKLGLQTQQAIKAFQRNYGLVPDGVVGP 59

Query: 160 STLEAMNV 167
           +T      
Sbjct: 60  ATWRIFER 67


>gi|251797379|ref|YP_003012110.1| spore cortex-lytic enzyme [Paenibacillus sp. JDR-2]
 gi|247545005|gb|ACT02024.1| spore cortex-lytic enzyme [Paenibacillus sp. JDR-2]
          Length = 264

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                 L +G+S   V  L+ RL   G    +  +  +F    ++AV  FQ + G+   G
Sbjct: 33  TFSNATLTVGSSGSDVYELQGRLKYLGYY--NGAIDGSFGTKTKNAVTWFQWKFGMKSDG 90

Query: 156 MVDSST 161
           +V + T
Sbjct: 91  VVGAKT 96


>gi|302548169|ref|ZP_07300511.1| putative peptidoglycan binding domain-containing protein
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302465787|gb|EFL28880.1| putative peptidoglycan binding domain-containing protein
           [Streptomyces himastatinicus ATCC 53653]
          Length = 121

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL--DPSGM 156
              L  G+S   V  L+ RL+   D+     ++  +D  +  AV  FQ+ +G+  D  G+
Sbjct: 45  AGVLSQGDSGPQVSELQTRLLKIPDVYRDGQVNGRYDQTLTEAVARFQLWYGIRGDEDGV 104

Query: 157 VDSSTLEAMN 166
              +T   + 
Sbjct: 105 YGDATRRDLE 114


>gi|262404758|ref|ZP_06081313.1| general secretion pathway protein A [Vibrio sp. RC586]
 gi|262349790|gb|EEY98928.1| general secretion pathway protein A [Vibrio sp. RC586]
          Length = 529

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 2/109 (1%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++  E      + +           W     R L  G     V  L  +L     L   +
Sbjct: 420 LVGNERYRIARQWLEPLWRGQYSLLWQGGFSRTLKQGMRGADVALLESKLAQV--LGEPE 477

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 478 RPRELFDKDLARKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|27382640|ref|NP_774169.1| hypothetical protein bll7529 [Bradyrhizobium japonicum USDA 110]
 gi|27355812|dbj|BAC52794.1| bll7529 [Bradyrhizobium japonicum USDA 110]
          Length = 314

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 62/246 (25%), Gaps = 78/246 (31%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G +         RL   G+     G               +Q   GL    +      
Sbjct: 128 QPGYNDPR------RLPPMGEPQMQGG---------------YQQGAGLQQEAV------ 160

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
                  D R RQ      +       K     ++V+ P   L  VE     +R  + VG
Sbjct: 161 -------DPRQRQFDPKFEKQLVDYSGKESAGTIVVDTPNKFLYLVEGNGRAMRYGIGVG 213

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R    T      I      P W  P  +I +                             
Sbjct: 214 RPG-FTWSGVKAITAKREWPDWTPPAEMIARR---------------------------- 244

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                      P+     + G  N + +  +         +H + EP          +SG
Sbjct: 245 -----------PDLPRHMEGGPENPLGARAMYLG-STLYRIHGSNEPWTIGTN---VSSG 289

Query: 343 CVRVRN 348
           C+R+RN
Sbjct: 290 CIRMRN 295


>gi|148558107|ref|YP_001257237.1| hypothetical protein BOV_A0165 [Brucella ovis ATCC 25840]
 gi|148369392|gb|ABQ62264.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 313

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     R++R    P W  P  +I ++ 
Sbjct: 182 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRVSRKAEWPTWTPPSEMIARE- 239

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 240 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 265

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 266 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 294


>gi|306840985|ref|ZP_07473726.1| Protein YBIS precursor [Brucella sp. BO2]
 gi|306289042|gb|EFM60307.1| Protein YBIS precursor [Brucella sp. BO2]
          Length = 208

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     R++R    P W  P  +I ++ 
Sbjct: 77  IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRVSRKAEWPTWTPPSEMIARE- 134

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 135 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 160

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 161 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 189


>gi|15893974|ref|NP_347323.1| spore cortex-lytic protein [Clostridium acetobutylicum ATCC 824]
 gi|15023563|gb|AAK78663.1|AE007583_10 Spore cortex-lytic enzyme prepeptide; peptodoglycan-binding domain
           [Clostridium acetobutylicum ATCC 824]
 gi|325508100|gb|ADZ19736.1| Spore cortex-lytic enzyme prepeptide [Clostridium acetobutylicum EA
           2018]
          Length = 234

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G++   V +++ +L   G    +  +   +     +AVK FQ ++G+ P G
Sbjct: 34  AVNAITYKYGSNGSGVIQIQTKLKNWGYY--TGKIDGVYGYQTYTAVKKFQTKNGILPDG 91

Query: 156 MVDSSTLEAMNVPVDLR 172
           +V ++T  A+ +     
Sbjct: 92  IVGTATSAALGMTTTQP 108


>gi|295702406|ref|YP_003595481.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
 gi|294800065|gb|ADF37131.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
          Length = 177

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 33/120 (27%), Gaps = 17/120 (14%)

Query: 255 MMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDW----NSPEPPNFIFRQDPG--KIN 306
           ++        Y  +  +        GK      V +    N  +   +      G    N
Sbjct: 38  IINKKTNQLAYFHNGKLEKTYSVATGKTWSDTPVGFFKIVNKIKNRPYYTGHIAGGASNN 97

Query: 307 AMASTKIEFYS----RNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            + S  +   +     +   +H             + + GCVR+ N    +L   +   T
Sbjct: 98  PLGSRWLGLNANGTTGDTYAIHGNNSEDSIGK---YVSHGCVRMHNADVEELFNKVAVGT 154


>gi|229527051|ref|ZP_04416446.1| general secretion pathway protein A [Vibrio cholerae 12129(1)]
 gi|229335448|gb|EEO00930.1| general secretion pathway protein A [Vibrio cholerae 12129(1)]
 gi|327484937|gb|AEA79344.1| General secretion pathway protein A [Vibrio cholerae LMA3894-4]
          Length = 529

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQKAPSLK 526


>gi|118442933|ref|YP_877698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium novyi NT]
 gi|118133389|gb|ABK60433.1| ErfK/YbiS/YcfS/YnhG family [Clostridium novyi NT]
          Length = 305

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 50/154 (32%), Gaps = 19/154 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG+    V+ L+  L   G           F +  E A+  FQ ++ L+  G+   S
Sbjct: 81  PLKLGSKGDDVKTLQNNLNKFGY---KIKADGVFGSSTEIAIYDFQKKNNLNRDGVAGES 137

Query: 161 TLEAMNV--------PVDLRIRQLQV------NLMRIKKLLEQKMGLRYVLVNIPAASLE 206
           TL+ + +             I    +      N +  +    Q     +V  N P   + 
Sbjct: 138 TLKKLALEPTEKTMYNPKDDIFSPVISSNNFENFINKRNANSQTDYYIWVNTNTPKTYIF 197

Query: 207 --AVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
                + K+       VGR    T     ++   
Sbjct: 198 KGYNHHWKLIKSMPCTVGRSSSPTIKGTFKVGNK 231


>gi|308272301|emb|CBX28907.1| hypothetical protein N47_B20530 [uncultured Desulfobacterium sp.]
          Length = 262

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 72  KETIAQTEKAIA---FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++ +   + A+A     +     GG        L  G+   +V  L+E L   G      
Sbjct: 171 RKYLRMAKDALAVIDGMRVAADEGG----STVVLRRGSFGNAVGDLQELLRAKGY---DV 223

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F    E AV  FQ   GL+  G+V ++T  A+ 
Sbjct: 224 TVDHDFGPATELAVMHFQKSTGLEKDGIVGNNTWTALR 261


>gi|189909412|gb|ACE60613.1| YkuD [Halobacillus aidingensis]
          Length = 164

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 49/135 (36%), Gaps = 11/135 (8%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P +     +I   P +  P +I  +  ++  ++  +   + ++     K   + V  +  
Sbjct: 34  PNMIFPGQQINI-PGFPNPDTIPYRIDVSTTKRRLRLYNNGSLE----KEFPIAVGRMLS 88

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +P    FI  + P       +  +    ++   +H T  P          + GC+R+ N
Sbjct: 89  ATPFGNFFIINKAPNPGGPYGTMWMSLSKQH-YGIHGTNNPSSIGK---AVSKGCIRMFN 144

Query: 349 --IIDLDVWLLKDTP 361
             + +L   +   TP
Sbjct: 145 KDVEELARTIPLGTP 159


>gi|327198296|ref|YP_004306871.1| gp27 [Burkholderia phage KS14]
 gi|310657259|gb|ADP02372.1| gp27 [Burkholderia phage KS14]
          Length = 268

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  L++RL  +G        +  FD   ESAV   Q   GL   G+    T
Sbjct: 5   LRKGDIGDEVLLLQKRLTRAGF---PVAETHVFDHDTESAVMTLQKARGLVIDGIAGPKT 61

Query: 162 LEAMNVPVDLR 172
           + A+      R
Sbjct: 62  MIALPGVALPR 72


>gi|306845502|ref|ZP_07478071.1| Protein YBIS precursor [Brucella sp. BO1]
 gi|306273823|gb|EFM55650.1| Protein YBIS precursor [Brucella sp. BO1]
          Length = 244

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     R++R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRVSRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 225


>gi|15615884|ref|NP_244188.1| cell wall-binding protein [Bacillus halodurans C-125]
 gi|10175945|dbj|BAB07041.1| cell wall-binding protein [Bacillus halodurans C-125]
          Length = 311

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G  S SV  L++ L   G LD  +     F    E AVK FQ  H L   G+    T
Sbjct: 41  LHEGVESESVTELQKLLETEGYLDDFEK--GVFHTETEEAVKQFQKDHELVVDGIAGPQT 98

Query: 162 LEAMNV----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           L A+ V         +  L+  L  +K L E  +  +Y  
Sbjct: 99  LGALLVLREGDEHEVVVDLKAKLEELK-LFEGTLDQQYDE 137



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+ +L           L   +D     AV+ FQ +  L   G+    
Sbjct: 104 VLREGDEHEVVVDLKAKLEEL--KLFEGTLDQQYDEDTTEAVREFQEKLDLQVDGVAGPE 161

Query: 161 TLEAM 165
           T   +
Sbjct: 162 TFGEL 166


>gi|304393365|ref|ZP_07375293.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294372|gb|EFL88744.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 308

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 24/177 (13%)

Query: 31  IHASVLDEIINESYHSIVND-------------RFDNFLARVDMGID-SDIPIISKETIA 76
           +    +D ++ E+   I                                + P  +K    
Sbjct: 123 LGYGSVDALVAEARSGIAGQVELMVRYIERAKISDALRTCDWHRFARIYNGPAYAKHGYH 182

Query: 77  QTEKAIAF--YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
               A      + + +           L  G+    V++L+++L  +G +  S      F
Sbjct: 183 TRMAAAHRRWMRKLATA---DTAERDVLKFGDRGPRVKQLQDQLKNAGYMVVS---DGIF 236

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQ 189
               +  ++ FQ  +G   SGMV  +    +     +   ++Q    +   +     
Sbjct: 237 GLDTDKELRNFQRDNGFAISGMVGHAEWAKLGGSTAIAAVVKQALPKVKVPRWWTSA 293


>gi|291533713|emb|CBL06826.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Megamonas hypermegale ART12/1]
          Length = 251

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L +    V  L++ LI          +S  +D   + AVK FQ  H +  +G+V+  T
Sbjct: 32  LKLNSHGHDVIVLQQNLIRMNY--DLSKVSGNYDKETQEAVKAFQKDHKIKVTGIVNRET 89

Query: 162 LEAMNVPVDLRI 173
             A+       I
Sbjct: 90  WWAIKSGKQNVI 101


>gi|120404350|ref|YP_954179.1| peptidoglycan binding domain-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957168|gb|ABM14173.1| Peptidoglycan-binding domain 1 protein [Mycobacterium vanbaalenii
           PYR-1]
          Length = 283

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 9/87 (10%)

Query: 89  LSRGGWPELPIRP-------LHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVES 140
           ++ GG P  P+         L+ G     V  L+ RL            +   F    ES
Sbjct: 191 VAGGGTPRPPVPVGEYADVLLYRGVRGPQVAELQRRLRYAYASYAGGLEIDGVFGPETES 250

Query: 141 AVKLFQMRH-GLDPSGMVDSSTLEAMN 166
           AV+ FQ R  GL   G+V  +T  A+ 
Sbjct: 251 AVREFQRRTPGLKVDGVVGPATAAALR 277


>gi|297581069|ref|ZP_06942994.1| general secretion pathway protein A [Vibrio cholerae RC385]
 gi|297534895|gb|EFH73731.1| general secretion pathway protein A [Vibrio cholerae RC385]
          Length = 529

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    D      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWDGQFALLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|294791578|ref|ZP_06756726.1| LysM domain protein [Veillonella sp. 6_1_27]
 gi|294456808|gb|EFG25170.1| LysM domain protein [Veillonella sp. 6_1_27]
          Length = 189

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 11  AKTIDRGQRGHHVSKVQTMLKHQGFLHDS--IDGIYGHNTEQAVRKFQKSKGLPVDGRVG 68

Query: 159 SSTLEAMNV 167
            +T+ A+  
Sbjct: 69  PATMNALEK 77


>gi|294793432|ref|ZP_06758569.1| LysM domain protein [Veillonella sp. 3_1_44]
 gi|294455002|gb|EFG23374.1| LysM domain protein [Veillonella sp. 3_1_44]
          Length = 189

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 11  AKTIDRGQRGHHVSKVQTMLKHQGFLHDS--IDGIYGHNTEQAVRKFQKSKGLPVDGRVG 68

Query: 159 SSTLEAMNV 167
            +T+ A+  
Sbjct: 69  PATMNALEK 77


>gi|258620833|ref|ZP_05715867.1| General secretion pathway protein A [Vibrio mimicus VM573]
 gi|258586221|gb|EEW10936.1| General secretion pathway protein A [Vibrio mimicus VM573]
          Length = 455

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 2/109 (1%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++  +      + +           W     R L  G     V  L  +L     L   +
Sbjct: 346 LVGDQRYRIARQWLEPLWRGQYSLLWQGGFSRTLKQGMQGDDVALLESKLSQV--LGEPE 403

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                FD  +   V+LFQ    +   G+V   TL  + +    +   L+
Sbjct: 404 RPRDQFDKDLSRKVELFQRWQNMQVDGIVGRQTLRRLELLTQQQAPSLK 452


>gi|269797668|ref|YP_003311568.1| 3D domain protein [Veillonella parvula DSM 2008]
 gi|269094297|gb|ACZ24288.1| 3D domain protein [Veillonella parvula DSM 2008]
          Length = 202

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 32/189 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKNQGFLHDS--IDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +T+ A+    +    +   +      L    +  +Y  V    AS             +
Sbjct: 82  PATMNAL----EKMETRYGGH---GTALSHDGVPNKYSRVLTMQASA-----------YS 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                    T         I+     +IP                 Y++     + D+ G
Sbjct: 124 AQDPGNGNYTATGSRLKKGIVSVDPKLIPL------------GTRLYIEGYGYAVADDVG 171

Query: 279 KEVFVEEVD 287
             +    +D
Sbjct: 172 GAIKGHRID 180


>gi|33865533|ref|NP_897092.1| hypothetical protein SYNW0999 [Synechococcus sp. WH 8102]
 gi|33632702|emb|CAE07514.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 181

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 52/200 (26%), Gaps = 69/200 (34%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMG--LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
             L+   +   +  +  L E+      R +++      L  +ENG + L   V  G    
Sbjct: 11  PLLQAASMDSVMEALASLPEELREQKDRQIVLLRGRRRLLLLENGNLRLAFPVATGMPGW 70

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +TP     + + +  P WV P +  + +                                
Sbjct: 71  ETPTGSFAVFQKIDQPVWVHPVTGERVE-------------------------------- 98

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEF----------YSRNNT--------YMHDTPE 328
                         + G  N + S  I F                          H TP 
Sbjct: 99  --------------EQGPDNPLGSHWIAFQRDCLGRDAHDGDRWITIKGCTTTGFHGTPH 144

Query: 329 PILFNNVVRFETSGCVRVRN 348
                   R  + GCVR+ N
Sbjct: 145 RWTVG---RAISHGCVRLYN 161


>gi|158319047|ref|YP_001511555.1| cell wall hydrolase/autolysin [Frankia sp. EAN1pec]
 gi|158114452|gb|ABW16649.1| cell wall hydrolase/autolysin [Frankia sp. EAN1pec]
          Length = 409

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 37/126 (29%), Gaps = 13/126 (10%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNS----- 107
           D          D     +     A  +        I+    +  +      LG+      
Sbjct: 59  DAGNGGPVDATDQFDNELDNAVRAFQQSRGLSVDGIIGPDTFRAIEEARRRLGDRLLHYS 118

Query: 108 ------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                    V  L+ERL   G           F A  +SAV+ FQ   GLDP G+    T
Sbjct: 119 VTHPFVGDDVAALQERLSNMGF--DVGRADGIFGARTDSAVRDFQRNRGLDPDGLCGPRT 176

Query: 162 LEAMNV 167
           L  +  
Sbjct: 177 LRELKR 182



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 30/103 (29%), Gaps = 36/103 (34%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD---------------------------------- 125
           + L LG+   SV   R   I  G L                                   
Sbjct: 2   KLLRLGDRDPSVAEARAAFIHLGFLPVAPRQTDAADGPGPGALETSTATGTGPSPAGDAG 61

Query: 126 --PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                  +  FD  +++AV+ FQ   GL   G++   T  A+ 
Sbjct: 62  NGGPVDATDQFDNELDNAVRAFQQSRGLSVDGIIGPDTFRAIE 104


>gi|251798289|ref|YP_003013020.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
 gi|247545915|gb|ACT02934.1| cell wall hydrolase SleB [Paenibacillus sp. JDR-2]
          Length = 212

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V+ L+ERL +      +  ++  F A  +SAV  FQ   GL P G+ 
Sbjct: 25  SAASLKVGSKGTEVKDLQERLYMLDYYKGN--ITSYFSASTKSAVAAFQKGAGLKPDGVA 82

Query: 158 DSSTLEAMNVPVDLR 172
            S TL A++     R
Sbjct: 83  GSITLHALHKVTVDR 97


>gi|78223669|ref|YP_385416.1| peptidoglycan binding domain-containing protein [Geobacter
           metallireducens GS-15]
 gi|78194924|gb|ABB32691.1| Peptidoglycan-binding domain 1 [Geobacter metallireducens GS-15]
          Length = 562

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  S +V +L+E L  +G       +S  +D   + A++ FQ   GLD  G   
Sbjct: 456 PSRLKPGGRSKAVGQLQELLKGAGYYA--GRISGTYDTVTQEAIRSFQTAEGLDADGRTG 513

Query: 159 SSTL 162
             TL
Sbjct: 514 EKTL 517


>gi|188996891|ref|YP_001931142.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931958|gb|ACD66588.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 254

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 60/192 (31%), Gaps = 46/192 (23%)

Query: 162 LEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRS 217
           L+  N  VD  ++ +  V  + +KK L +      V V++    L     +E+G   +  
Sbjct: 84  LKEANKSVDPFKVEKGTVITIPLKKKLPENFNYNTVYVSLKDKRLYYPIKLEDGDYVITF 143

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V  G  +  TP     I     NP W++P S                            
Sbjct: 144 PVGTGDEEYPTPTGEFAITEKKINPDWIVPPS---------------------------- 175

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                           P        G   N + +  +   + ++  +H T +       +
Sbjct: 176 -----------ARANNPKLPPVVPFGSPENGLGTRALRL-NESSYMIHGTSKRSEKGVGM 223

Query: 337 RFETSGCVRVRN 348
           +  + GC+ +RN
Sbjct: 224 K-ISYGCIVMRN 234


>gi|304436665|ref|ZP_07396634.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370361|gb|EFM24017.1| endopeptidase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 245

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+  L  +G     K +   F    E AV  FQ  + +  +G+V+++
Sbjct: 27  TLREGSHGHDVLVLQRALQNAGY--QIKSIDGNFGKETEHAVAAFQRDNKIKITGVVNNA 84

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 85  TWRALRNAPAKR 96


>gi|271970428|ref|YP_003344624.1| hypothetical protein Sros_9263 [Streptosporangium roseum DSM 43021]
 gi|270513603|gb|ACZ91881.1| hypothetical protein Sros_9263 [Streptosporangium roseum DSM 43021]
          Length = 381

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 47/164 (28%), Gaps = 29/164 (17%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+ +  V+RL+ RL           ++  + A  + AV  FQ   GL     V 
Sbjct: 41  GRTLRPGDYAKIVERLQRRLQELNF--SPGLVNGYYGAETQVAVWAFQKSQGLMAKDEVG 98

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS--LEAVENGKVGLR 216
             T  A+  P                         R   V I      L    + +  L 
Sbjct: 99  PETWRALAHP---------------HWAPPLVSAGRPRRVEIDLRRQLLTVYRHNRPMLI 143

Query: 217 STVIVG----------RVDRQTPILHSRINRIMFNPYWVIPRSI 250
           S V  G               TP    R+ +   +     P ++
Sbjct: 144 SHVSTGSGTYFCQYGNSSSALTPAGDFRVAQRERHRAEDPPATM 187


>gi|90423632|ref|YP_532002.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90105646|gb|ABD87683.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 408

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 68/221 (30%), Gaps = 55/221 (24%)

Query: 150 GLDPSGMVD----SSTLEAMNVPVDLRIRQ---LQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           G  P+G V       TL A+             L  NL R +     K     ++V+ P 
Sbjct: 180 GAAPNGAVGNDGRPVTLSALPPEEQPEADTNFELPPNLRRQEVAFPTKEPPGTLVVDTPN 239

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  V  G   +R  V VGR D  T     +++R    P W  P  +I++         
Sbjct: 240 THLYYVLGGGRAIRYGVRVGR-DGFTWNGVQKVSRKAEWPDWHPPTEMIERQ-------- 290

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
                                          P        G  N M +  +   S    Y
Sbjct: 291 -------------------------------PYLPRFMAGGPGNPMGARAMYLGS--TVY 317

Query: 323 -MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            +H T +P        F +SGC+ + N  + DL   +   T
Sbjct: 318 RIHGTNQPSTIGK---FVSSGCIGMLNDDVSDLFDRVKVGT 355


>gi|260892380|ref|YP_003238477.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4]
 gi|260864521|gb|ACX51627.1| ErfK/YbiS/YcfS/YnhG family protein [Ammonifex degensii KC4]
          Length = 206

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+    V  ++  L   G       +S  FDA  + AV+ FQ  H L   G VD
Sbjct: 140 PRVLREGDCGSDVMEVQRVLRRQGFYS--GPISGRFDAQTKEAVRRFQQHHRLPSLGEVD 197

Query: 159 SSTLE 163
             T E
Sbjct: 198 EKTYE 202



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
           GK      V   S       +       +   +  I        Y +H T +P       
Sbjct: 52  GKAETPTPVGNWSVTRKAMNW------GSGFGTRWIGLDVPWGIYGLHGTNKPWSIG--- 102

Query: 337 RFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
           R E+ GC+R+  R+I +L   +   TP      I
Sbjct: 103 RTESQGCIRMFNRDIEELYPRVRPGTPVIVVGKI 136


>gi|239906940|ref|YP_002953681.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio magneticus RS-1]
 gi|239796806|dbj|BAH75795.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio magneticus RS-1]
          Length = 229

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 46/167 (27%), Gaps = 42/167 (25%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVEN-----GKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
              +     + V++    L   EN       +     V V   D + P     +  I F 
Sbjct: 80  YNARKNHYSIEVHLSQRKLFLYENLPDGSRHLARSYVVAVPGRDMEAPQGWGVVTGISFE 139

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P   +++  +   +  P+Y                                    
Sbjct: 140 PSWR-PTPAMKERALKKGKPLPEY---------------------------------VGP 165

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             K N M   KI         +H    P       R  TSGC+R+RN
Sbjct: 166 GVKDNPMGPFKIILSHGYGFRIHGNNNPNSIG---RPVTSGCIRMRN 209


>gi|170741810|ref|YP_001770465.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168196084|gb|ACA18031.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 267

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 57/194 (29%), Gaps = 46/194 (23%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A   P +   R L     R             V+++     L  V+ G   LR  + VG
Sbjct: 107 AAGPEPEEGIGRVLDARYRRQVVPYSGAHRPGTVVIDTRERFLYLVQPGGQALRYGIGVG 166

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R    T      +++    P W  P  ++++                             
Sbjct: 167 RPG-FTWAGVKSVSQKREWPDWTPPPEMLRRR---------------------------- 197

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                      P+     + G  N + +  +   S     +H T EP          +SG
Sbjct: 198 -----------PDLPRHMEGGPGNPLGARALYLGSS-LYRIHGTNEPHTIGQN---VSSG 242

Query: 343 CVRV--RNIIDLDV 354
           C+R+   ++IDL  
Sbjct: 243 CIRMMNEDVIDLYD 256


>gi|27376579|ref|NP_768108.1| hypothetical protein blr1468 [Bradyrhizobium japonicum USDA 110]
 gi|27349720|dbj|BAC46733.1| blr1468 [Bradyrhizobium japonicum USDA 110]
          Length = 272

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 17/194 (8%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G  ++ TL    +     + Q Q          +Q        V+ PA + +  E+ ++ 
Sbjct: 35  GSANAQTLGYAPMQPQAYLPQPQA--------YQQDPSYSQGYVSEPAQTAD--EDAQLP 84

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
            R    V   DR  P     I+      Y+V+      +  + + R+       + +  +
Sbjct: 85  DRLRKQVVSFDRSEPAGTIVIDTGNTYLYYVLGNGRAIRYGVGVGREG---FTWSGVQSV 141

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
             K +              P        G  N + +  +   S     +H T +P     
Sbjct: 142 SRKAEWPDWHPPAEMIARQPYLPRFVAGGPGNPLGARAMYLGSSE-YRIHGTNDPTTIGK 200

Query: 335 VVRFETSGCVRVRN 348
              F +SGC+R+ N
Sbjct: 201 ---FVSSGCIRMTN 211


>gi|296133960|ref|YP_003641207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296032538|gb|ADG83306.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 291

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 19/159 (11%)

Query: 224 VDRQTPILH--SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN----IHMIDEK 277
             R+T           ++ +    +  +  +K ++        YL++        +   +
Sbjct: 7   EGRRTRRFSCVLLALFLLCSLPGPVFATEAKKIIINKKVNKLAYLENGQVSKIFPVATGR 66

Query: 278 GKEVFVE---EVDWNSPEPPNFIFRQDPG-KINAMASTKIEF----YSRNNTYMHDTPEP 329
             ++  E    V      P     +   G   N + +  +       S     +H T  P
Sbjct: 67  TPDLTPEGSFRVVRKVVNPYYNKLKIPGGSPRNPLGARWLGIDARGTSGGTYGIHGTNNP 126

Query: 330 ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                   + + GC+R+ N   +  WL + TP  +   I
Sbjct: 127 KSIGK---YASGGCIRMFNQDVI--WLYERTPIGTPVEI 160


>gi|237795719|ref|YP_002863271.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
           657]
 gi|229262866|gb|ACQ53899.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Ba4 str.
           657]
          Length = 281

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 57  ARVDMGIDSDIPIISKETIAQTEKAI-AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
            +      +  P  SK      +  +       +SR G+  LP      G      + ++
Sbjct: 169 GKTASTTSNSEPSTSKPVQTNKKHPLINQLYAEMSRQGFNTLP--TCRQGARGNITKIIQ 226

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + LI  G    S G    F +    AVK FQ    L   G+V   T + +
Sbjct: 227 QMLINIGYPVGSFGADGVFGSGTVVAVKSFQRDCNLGADGIVGRETWKVL 276


>gi|319442206|ref|ZP_07991362.1| putative hydrolase [Corynebacterium variabile DSM 44702]
          Length = 396

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 29/80 (36%), Gaps = 12/80 (15%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQ 146
                LG+    V  +R  L   G +D   G                FD  ++SA++ FQ
Sbjct: 3   DEVYKLGDRGPRVAEVRGTLARLGFIDGFAGDATGEANQRWRPEDETFDEGLDSALRGFQ 62

Query: 147 MRHGLDPSGMVDSSTLEAMN 166
              G+   G +   TL A+ 
Sbjct: 63  QHRGIIADGHITEGTLRALR 82



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 25/115 (21%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLH--------LGNS------------SVSV 111
            E +    +    ++ I++ G    +    L         LG                 V
Sbjct: 51  DEGLDSALRGFQQHRGIIADGH---ITEGTLRALREASYSLGARVLSLQGPGHYLVGDDV 107

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             L+  L   G       +   F      AV  +Q+  GL+P G+V  +TL A++
Sbjct: 108 AELQGHLHDLGFFTSR--IDGHFGPMTHDAVAAYQLNAGLNPDGIVGPATLRALS 160


>gi|294853202|ref|ZP_06793874.1| hypothetical protein BAZG_02149 [Brucella sp. NVSL 07-0026]
 gi|294818857|gb|EFG35857.1| hypothetical protein BAZG_02149 [Brucella sp. NVSL 07-0026]
          Length = 313

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 49/153 (32%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W +P  +I ++ 
Sbjct: 182 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTLPSEMIARE- 239

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 240 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 265

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T +P      +   +SGC+R+RN
Sbjct: 266 G-STLYRIHGTNQPWTIGKAM---SSGCIRMRN 294


>gi|294817680|ref|ZP_06776322.1| Peptidoglycan-binding domain 1 protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326446616|ref|ZP_08221350.1| peptidoglycan binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322495|gb|EFG04630.1| Peptidoglycan-binding domain 1 protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 345

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L  G    +V  L+  L   G    +  +   F     + VK FQ    L  
Sbjct: 62  WP-----VLRAGQKGANVSALQHLLNFRG---QTLTVDGDFGPTTTAKVKAFQQSQALTD 113

Query: 154 SGMVDSSTLEAMNVPVD 170
            G+V + T  A+   V 
Sbjct: 114 DGVVGADTWSALVTTVQ 130



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 10/118 (8%)

Query: 70  ISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
               T A+ + A    Q +   G      W  L    +  G+S  +V+  +  L   G  
Sbjct: 94  FGPTTTAKVK-AFQQSQALTDDGVVGADTWSALVT-TVQSGSSGSAVRAAQTLLAARG-- 149

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             +  +   F A   + V+ FQ   G   +G+VD++T  A+     L    L   +  
Sbjct: 150 -QAVSVDGIFGADTAAKVRAFQQGAGQAVTGVVDTTTWLALLQETALDRVTLARQIRD 206


>gi|23100366|ref|NP_693833.1| hypothetical protein OB2911 [Oceanobacillus iheyensis HTE831]
 gi|22778599|dbj|BAC14867.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 1115

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 61/175 (34%), Gaps = 12/175 (6%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           +      E  IA    I        +   PL LGNS   +  L+E L   G       +S
Sbjct: 644 QSHYGLLENGIADEVTIAKL---DNIFNHPLQLGNSHPDIITLKENLNHLGY--DGIAIS 698

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI----RQLQVNLMRIKKLL 187
             F  + E+ +K FQ  +GL  SG+ D  TL A+   V+ R           L +     
Sbjct: 699 DYFGNWTETRLKQFQEDNGLPVSGIADEITLAAIEEAVENRWIIEYTPYPTTLTQALSKQ 758

Query: 188 EQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
                      N+PA      ++  +    +   V    R  P L S++   + N
Sbjct: 759 MSVSPQTDAYRNLPAYVHSSYIDLTRTAAITGTSV--NLRTAPQLISKVAFNVGN 811



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E+ +A  +++               LG+   ++  ++E+L   G        +  F  + 
Sbjct: 240 ERTLAKLEELA--------STDVFELGDRHNAIITIKEKLNAIGF--GGISETNYFGGWT 289

Query: 139 ESAVKLFQMRHGLDPSGMVDSST 161
           E+ VK FQ  +GL   G V  +T
Sbjct: 290 ETRVKQFQQYYGLSVDGKVGPAT 312



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+   P   G        L+E+L   G       +S  +  + +S VK FQ  +GL  +G
Sbjct: 457 EVYNSPFQAGKRHEDTIELKEKLNRLGY--GHITVSTLYGNFTKSQVKRFQREYGLVENG 514

Query: 156 MVDSSTL 162
           + D +T 
Sbjct: 515 IADENTW 521



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 6/79 (7%)

Query: 87  DILSRGGWPELPIR----PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I     W +L          LG+    +  ++++L   G        +  +  + E+ V
Sbjct: 514 GIADENTWIKLNEAYYNASFQLGDRHEDIIEIKKQLNAIGF--GGISETNYYGGWTETRV 571

Query: 143 KLFQMRHGLDPSGMVDSST 161
           K FQ  + L  +G+VD +T
Sbjct: 572 KQFQKYYHLTVTGIVDHTT 590



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 10/80 (12%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A  +++               LG+   ++  L+++L   G        +  F  + E+ 
Sbjct: 382 LAKLEELA--------STDVFELGDRHSAIILLKKKLNAVGF--DRISETDYFGGWTETR 431

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           V+ FQ  + L+ +G  D +T
Sbjct: 432 VRQFQEYYNLNVTGKADEAT 451



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 18/147 (12%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT-------E 79
              P       E + E    + +  FD        G  ++  +   +T  Q        +
Sbjct: 112 ASLPYEKGDRHEDLVEIKEKLNHIGFDGITETDYFGNWTETRVTQFQTYYQLSITGKVDQ 171

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           K I              +   P   G      + ++E+L   G       ++  F  Y+E
Sbjct: 172 KTINKLD---------SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYME 220

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S VK FQ   GL  +G+ D  TL  + 
Sbjct: 221 SQVKEFQRDQGLRVNGIADERTLAKLE 247



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 318 SVYNSPFQNGERHEDTKAIKEKLNSIGY--GPITVTTLFGDYMESQVKEFQRDQGLRVNG 375

Query: 156 MVDSSTLEAMN 166
           + D  TL  + 
Sbjct: 376 IADGPTLAKLE 386



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G        ++E+L   G       +S  + ++ E+ V+ FQ  +GL  +G
Sbjct: 596 SVYNSPFQNGKRHDGTVEIKEKLNRIGF--GYITVSTLYGSFTETQVRKFQSHYGLLENG 653

Query: 156 MVDSSTLEAMN 166
           + D  T+  ++
Sbjct: 654 IADEVTIAKLD 664


>gi|297192181|ref|ZP_06909579.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197720174|gb|EDY64082.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 245

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G S   V +L+ R+  SG         +  ++     +AVK FQ  +GL   G+
Sbjct: 39  SRTLSQGASGSDVTQLQIRM--SGYPGYGAVLAVDGSYGPATTAAVKRFQSAYGLAADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATFSKI 105


>gi|304404060|ref|ZP_07385722.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304347038|gb|EFM12870.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 112

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 4/51 (7%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
                     +     +   +H T EP     V    + GC+R+ N   L 
Sbjct: 51  NPGGPFGVLWMGLSKPH-YGIHGTNEPASIGKV---VSHGCIRMYNNDVLA 97


>gi|269795813|ref|YP_003315268.1| membrane-fusion protein [Sanguibacter keddieii DSM 10542]
 gi|269097998|gb|ACZ22434.1| membrane-fusion protein [Sanguibacter keddieii DSM 10542]
          Length = 379

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 3/86 (3%)

Query: 94  WPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           + ELP  R L +G+    V +L+E L   G    S      +      AV  +Q   GL 
Sbjct: 127 FGELPAYRELGVGDRGADVSQLKENLTALGYTGFSA--DDRYTQATSRAVSRWQKDVGLP 184

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQV 178
            +G +    +  +  PV +  R ++V
Sbjct: 185 QTGRLGPEQVTVVRGPVRVASRSVEV 210


>gi|148258201|ref|YP_001242786.1| hypothetical protein BBta_6995 [Bradyrhizobium sp. BTAi1]
 gi|146410374|gb|ABQ38880.1| hypothetical protein BBta_6995 [Bradyrhizobium sp. BTAi1]
          Length = 247

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 49/181 (27%), Gaps = 44/181 (24%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                   L   L R    L+ +     ++++     L  V  G   LR  V VGR    
Sbjct: 59  TAQDEDSLLPDRLRRTIVNLDTREAPGTIIIDTGNTYLYYVLGGGRALRYGVGVGREG-F 117

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T      I R    P W  P  +I +                                  
Sbjct: 118 TWTGVQTITRKAEWPDWHPPAQMIARQ--------------------------------- 144

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                 P        G  N + +  +   S     +H T +P        F +SGC+R+ 
Sbjct: 145 ------PYLPRFMAGGPGNPLGARAMYLGSSE-YRIHGTNDPTTIGK---FVSSGCIRLT 194

Query: 348 N 348
           N
Sbjct: 195 N 195


>gi|281418662|ref|ZP_06249681.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum JW20]
 gi|281407746|gb|EFB38005.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum JW20]
          Length = 423

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  
Sbjct: 2   QVLRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGP 59

Query: 160 STLEAMNV 167
           +T      
Sbjct: 60  ATWSVFEQ 67


>gi|153868973|ref|ZP_01998687.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
 gi|152074467|gb|EDN71319.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
          Length = 281

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
            L LG+    V +L+E+L           ++  +D   + AV+ +Q  + GL  +G+ D 
Sbjct: 67  TLKLGDQGALVAKLQEKLTERKYY--QGKITGFYDENTQKAVRQYQTEYFGLPATGIADP 124

Query: 160 STLE 163
            T +
Sbjct: 125 LTFD 128


>gi|312111310|ref|YP_003989626.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
 gi|311216411|gb|ADP75015.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
          Length = 165

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           RQ P       +  +     +   +H T  P        + + GC+R+ N  +++L   +
Sbjct: 101 RQ-PNPGGPFGAIWLSLSKIH-YGIHGTNNPSSIGK---YVSKGCIRMHNKDVLELASLV 155

Query: 357 LKDTP 361
              T 
Sbjct: 156 PNGTE 160


>gi|188582015|ref|YP_001925460.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179345513|gb|ACB80925.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 224

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 45/168 (26%), Gaps = 46/168 (27%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R             ++V+     L  ++     LR  V VGR    T      +      
Sbjct: 82  RETVPYAGPYAPGTIVVSTAERRLYLIQPNGEALRYGVGVGRPG-FTWGGMQTVTMKREW 140

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 141 PDWRPPAEMLRRR---------------------------------------PDLPRYMK 161

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +   +    Y +H + EP          +SGC+R+ N
Sbjct: 162 GGIENPLGARAMYLGN--TIYRIHGSNEPETIGT---AVSSGCIRMTN 204


>gi|256003872|ref|ZP_05428859.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           2360]
 gi|255992210|gb|EEU02305.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           2360]
 gi|316939083|gb|ADU73117.1| peptidase M14 carboxypeptidase A [Clostridium thermocellum DSM
           1313]
          Length = 423

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  
Sbjct: 2   QVLRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGP 59

Query: 160 STLEAMNV 167
           +T      
Sbjct: 60  ATWSVFEQ 67


>gi|237756533|ref|ZP_04585060.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691307|gb|EEP60388.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 254

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 46/192 (23%)

Query: 162 LEAMNVPVDL-RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRS 217
           L+  N  V+  ++ +  V  + +KK L +      V V++    L     +E+G   +  
Sbjct: 84  LKEANKSVNPFKVEKGTVITIPLKKKLPENFNYNTVYVSLKDKRLYYPIKLEDGDYVITF 143

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V  G  +  TP     I     NP W++P S                            
Sbjct: 144 PVGTGDEEYPTPTGEFTITEKKVNPDWIVPPS---------------------------- 175

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                           P        G   N + +  +   ++++  +H T +       +
Sbjct: 176 -----------ARANNPKLPPVVPFGSPENGLGTRALRL-NKSSYMIHGTSKRSEKGVGM 223

Query: 337 RFETSGCVRVRN 348
           +  + GCV +RN
Sbjct: 224 K-ISYGCVVLRN 234


>gi|297204486|ref|ZP_06921883.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
 gi|297148706|gb|EFH29085.1| serine/threonine protein kinase [Streptomyces sviceus ATCC 29083]
          Length = 562

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            LG+S   VQ+++  L   G      G+   F +  ++AV+ FQ   GLD  G+V   T 
Sbjct: 496 RLGDSGKRVQQVQCMLTERGYSVGGTGVDGEFGSGTQNAVRAFQNERGLDADGVVAHDTW 555

Query: 163 EAMN 166
            A+ 
Sbjct: 556 VALR 559


>gi|23007283|ref|ZP_00049221.1| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 64

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 9/70 (12%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           G    +    I+     +  +H TPEP          + GC+R+ N    DL     +  
Sbjct: 2   GAEQPVGIVWIDLSIP-SYGIHGTPEPEKVGKTE---SHGCIRLTNWDARDLAS---RTQ 54

Query: 361 PTWSRYHIEE 370
                  ++ 
Sbjct: 55  KGAKVEFLDN 64


>gi|295098253|emb|CBK87343.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 310

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W    +  + 
Sbjct: 97  IVVNVAEMRLYYYPPGSNTVEVLPIGIGQAGRETPRNWVTAVERKQEGPTWSPTPNTRRA 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                               + E          G  N M    +
Sbjct: 157 -----------------------------------YAKEGKTLPAFVPAGPDNPMGLYAL 181

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                     H T     F   +R  + GC+R+RN
Sbjct: 182 YIGRLYAI--HGTNSN--FGIGLR-VSQGCIRLRN 211


>gi|319649778|ref|ZP_08003931.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2]
 gi|317398532|gb|EFV79217.1| hypothetical protein HMPREF1013_00535 [Bacillus sp. 2_A_57_CT2]
          Length = 165

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 10/116 (8%)

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI    +++  ++    L +  I  +      + V ++   +P     I  ++P    
Sbjct: 52  PDSIPYTIIVSRGKRSLTLLYNGAIQKVY----PIAVGKMLTQTPIGEFVIVNREPNPGG 107

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                 +    +    +H T  P          + GC+R+  +++++L   +   T
Sbjct: 108 PYGVMWLSLS-KAGYGIHGTNNPSSIGQS---VSQGCIRMYNQDVLELSRIVPNGT 159


>gi|160943094|ref|ZP_02090331.1| hypothetical protein FAEPRAM212_00573 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445563|gb|EDP22566.1| hypothetical protein FAEPRAM212_00573 [Faecalibacterium prausnitzii
           M21/2]
          Length = 894

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 66/189 (34%), Gaps = 9/189 (4%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD---ILSRGGWP-ELPIRPLH 103
           V+  F    A           +     + QT      Y +   I S  G P   P  PL 
Sbjct: 478 VDGVFGTATANAVRAFQRKYGLTVDGIVGQT-TWKELYDEFLSIQSDNGTPNAYPGTPLR 536

Query: 104 LGNSSVSVQRLR--ERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            G+S  +V+ ++   ++  +      S  +   F A   +AV+ FQ   GL   G+V  +
Sbjct: 537 EGSSGQNVRLVQFWLKIARTVYTSLESVTVDGKFGAGTAAAVRRFQRYFGLTADGVVGRT 596

Query: 161 TLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           T + +  V  D+  R L  +L   +     + G     V      L  +   +  +    
Sbjct: 597 TWQKLYEVYNDIANRLLSSSLRPGEYPGVLRSGSTGTAVRELQFYLYLMSAYESSIPPVS 656

Query: 220 IVGRVDRQT 228
           I G+    T
Sbjct: 657 IDGKFGADT 665



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + + + V+ FQ +  L   
Sbjct: 343 PGTPLRQGSRGAAVFTLQRQLNRITKDYPFLGKLTVDGVFGSRMAATVRAFQKQFNLTAD 402

Query: 155 GMVDSSTL 162
           G+V   T 
Sbjct: 403 GVVGRQTW 410



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 9/133 (6%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDILSRGGWPELPI 99
                 V+ +F    A           + +   + +T  +K    Y DI +R     L  
Sbjct: 560 SLESVTVDGKFGAGTAAAVRRFQRYFGLTADGVVGRTTWQKLYEVYNDIANRLLSSSLRP 619

Query: 100 R----PLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                 L  G++  +V+ L+  L +    +   P   +   F A  E AV+ +Q   GL 
Sbjct: 620 GEYPGVLRSGSTGTAVRELQFYLYLMSAYESSIPPVSIDGKFGADTERAVRAYQRFAGLT 679

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  ++
Sbjct: 680 VDGVVGRTTWNSL 692



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 6/98 (6%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PS 127
           S + +A+           LS G W +     L  G S  +V++++  L      D   PS
Sbjct: 419 SVKDLAELTSEGETSTGTLSNGTWND---TVLSTGASGSAVEQVQFWLNTLAQYDSAIPS 475

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +   F     +AV+ FQ ++GL   G+V  +T + +
Sbjct: 476 VKVDGVFGTATANAVRAFQRKYGLTVDGIVGQTTWKEL 513



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 39/178 (21%)

Query: 26  LVEKPIHASVLDEIINESYHSIV--NDRFDNFLARVDMGIDSDIPIISKETI--AQTEKA 81
           L+   +       ++            +F  +L       +S IP +S +    A TE+A
Sbjct: 612 LLSSSLRPGEYPGVLRSGSTGTAVRELQFYLYLMS---AYESSIPPVSIDGKFGADTERA 668

Query: 82  IAFYQD--------ILSRGGWPEL---------------------PIRPLHLGNSSVSVQ 112
           +  YQ         ++ R  W  L                     P  PL +G+S  +V 
Sbjct: 669 VRAYQRFAGLTVDGVVGRTTWNSLYGRASQLRSSGPVVTLKRLPYPGTPLTVGSSGETVL 728

Query: 113 ---RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               L  R+        +  L+  +     +A +  Q   GL+ +G+ D+ T  A+  
Sbjct: 729 YYNLLLLRIAYYFSSVEAPPLADRYTEETATATRSAQQLLGLEQTGIADADTWTAVEA 786


>gi|125974872|ref|YP_001038782.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I. metallo
           peptidase. MEROPS family M14C [Clostridium thermocellum
           ATCC 27405]
 gi|125715097|gb|ABN53589.1| gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I, Metallo
           peptidase, MEROPS family M14C [Clostridium thermocellum
           ATCC 27405]
          Length = 423

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L LG+    V+  +  L   G   P   +   +      AV  FQ  +GL   G+V  
Sbjct: 2   QVLRLGSVGPDVKLAQSLLNKIGY--PVGAVDGIYGTRTRQAVIAFQRNNGLVADGIVGP 59

Query: 160 STLEAMNV 167
           +T      
Sbjct: 60  ATWSVFEQ 67


>gi|297563684|ref|YP_003682658.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848132|gb|ADH70152.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 245

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +   P L  G+S   V  ++ERL   G      G+   F  + E AV   Q   G+   
Sbjct: 43  SVSTGPELRQGSSGAGVSAVQERLAELGYW--IDGVDGQFGFHTEQAVVALQKAAGIARD 100

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G+V  +T  A+   V    + 
Sbjct: 101 GVVGPATRAALAEGVLPEAQS 121


>gi|170744054|ref|YP_001772709.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168198328|gb|ACA20275.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 212

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R     +   G   ++V+     L  V  G   LR  + VGR    T      I      
Sbjct: 70  RETVSYDGPYGAGTIVVSTAERRLYYVLGGGQALRYGIGVGRPG-FTWGGVQTITMKREW 128

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  +I++                                        P+      
Sbjct: 129 PDWRPPSQMIRRR---------------------------------------PDLPRYMK 149

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 150 GGPENPLGARAMYLG-GTLYRIHGSNEPETIGT---AVSSGCIRMTN 192


>gi|15642441|ref|NP_232074.1| general secretion pathway protein A [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227082566|ref|YP_002811117.1| general secretion pathway protein A [Vibrio cholerae M66-2]
 gi|229507495|ref|ZP_04397000.1| general secretion pathway protein A [Vibrio cholerae BX 330286]
 gi|229512310|ref|ZP_04401789.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|229519446|ref|ZP_04408889.1| general secretion pathway protein A [Vibrio cholerae RC9]
 gi|229607000|ref|YP_002877648.1| general secretion pathway protein A [Vibrio cholerae MJ-1236]
 gi|254849569|ref|ZP_05238919.1| general secretion pathway protein A [Vibrio cholerae MO10]
 gi|255746883|ref|ZP_05420828.1| general secretion pathway protein A [Vibrio cholera CIRS 101]
 gi|262162048|ref|ZP_06031064.1| general secretion pathway protein A [Vibrio cholerae INDRE 91/1]
 gi|298500197|ref|ZP_07010002.1| general secretion pathway protein A [Vibrio cholerae MAK 757]
 gi|9657021|gb|AAF95587.1| general secretion pathway protein A [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|227010454|gb|ACP06666.1| general secretion pathway protein A [Vibrio cholerae M66-2]
 gi|229344135|gb|EEO09110.1| general secretion pathway protein A [Vibrio cholerae RC9]
 gi|229352275|gb|EEO17216.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|229355000|gb|EEO19921.1| general secretion pathway protein A [Vibrio cholerae BX 330286]
 gi|229369655|gb|ACQ60078.1| general secretion pathway protein A [Vibrio cholerae MJ-1236]
 gi|254845274|gb|EET23688.1| general secretion pathway protein A [Vibrio cholerae MO10]
 gi|255735285|gb|EET90685.1| general secretion pathway protein A [Vibrio cholera CIRS 101]
 gi|262028297|gb|EEY46954.1| general secretion pathway protein A [Vibrio cholerae INDRE 91/1]
 gi|297540890|gb|EFH76944.1| general secretion pathway protein A [Vibrio cholerae MAK 757]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|121730096|ref|ZP_01682499.1| general secretion pathway protein A [Vibrio cholerae V52]
 gi|147674552|ref|YP_001217947.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|262167277|ref|ZP_06034987.1| general secretion pathway protein A [Vibrio cholerae RC27]
 gi|121628153|gb|EAX60683.1| general secretion pathway protein A [Vibrio cholerae V52]
 gi|146316435|gb|ABQ20974.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|227014337|gb|ACP10547.1| general secretion pathway protein A [Vibrio cholerae O395]
 gi|262024252|gb|EEY42943.1| general secretion pathway protein A [Vibrio cholerae RC27]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|218288979|ref|ZP_03493216.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240804|gb|EED07982.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 719

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++  +V++L+E L     L     +   F    ++AVK FQ++HG+   G+    T
Sbjct: 619 LQLGSTGPAVKQLQEDLNKV--LGLHLAVDGVFGPATQAAVKSFQLQHGITVDGIYGPQT 676

Query: 162 LEAM 165
            +AM
Sbjct: 677 AQAM 680


>gi|331268987|ref|YP_004395479.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum BKT015925]
 gi|329125537|gb|AEB75482.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum BKT015925]
          Length = 307

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG+    V+ L+++L   G    S      F    E+A+  FQ R+ L   G+   S
Sbjct: 83  PLKLGSRGNEVKTLQQKLNKFGYKINS---DGIFGDSTETAIYDFQKRNDLARDGIPGKS 139

Query: 161 TLEAMNVPVDLR 172
           TL+ +++    +
Sbjct: 140 TLKKLDLEPTEK 151


>gi|295400837|ref|ZP_06810813.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294977100|gb|EFG52702.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 165

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           RQ P       +  +     +   +H T  P        + + GC+R+ N  +++L   +
Sbjct: 101 RQ-PNPGGPFGAIWLSLSKIH-YGIHGTNNPSSIGK---YVSKGCIRMHNKDVLELASLV 155

Query: 357 LKDTP 361
              T 
Sbjct: 156 PNGTE 160


>gi|52142756|ref|YP_084072.1| spore cortex-lytic enzyme [Bacillus cereus E33L]
 gi|51976225|gb|AAU17775.1| spore cortex-lytic enzyme [Bacillus cereus E33L]
          Length = 253

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGNSGGTAQENKPPQNKGKNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|325920553|ref|ZP_08182475.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
           19865]
 gi|325548946|gb|EGD19878.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
           19865]
          Length = 663

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGM 156
            L  G+    V  L+  LI  G    +     ++  +D   E  V+ FQ+ HG+ + +G+
Sbjct: 363 ALRPGDRGTEVLALQASLIQLGINARVKTPIEITGLYDQQTERGVQAFQLMHGMDEVNGI 422

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
            D +T  A+    D  I Q
Sbjct: 423 ADRATRAAVQQHADDAIAQ 441


>gi|312971054|ref|ZP_07785233.1| peptidoglycan-binding domain 1 domain protein [Escherichia coli
           1827-70]
 gi|310336815|gb|EFQ01982.1| peptidoglycan-binding domain 1 domain protein [Escherichia coli
           1827-70]
          Length = 282

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDP 126
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD 
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDG 267


>gi|303231888|ref|ZP_07318597.1| 3D domain protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513417|gb|EFL55450.1| 3D domain protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 201

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     VQ+++  L+  G L+ S      F    E AV+ FQ   GL   G V ++T+ A
Sbjct: 29  GQRGHHVQKIQTMLVHQGYLNDSA--DGIFGRNTELAVRKFQKAKGLAVDGRVGAATMSA 86

Query: 165 MNV 167
           +  
Sbjct: 87  LEK 89


>gi|311029721|ref|ZP_07707811.1| hypothetical protein Bm3-1_04054 [Bacillus sp. m3-13]
          Length = 166

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 14/132 (10%)

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLK---DNNIHMIDEKGKEVFVEEVD-----WNS 290
           + NP  + P  +I    +      P  ++    N   ++   G  +    +      + +
Sbjct: 32  ISNPNVIYPGQLIIIPGLPDANTIPYSIEISITNRKLVLKGNGIIIKTYPIAVGRMLFET 91

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RN 348
           P     I  + P       +  +    + +  +H T +P          + GCVR+  ++
Sbjct: 92  PVGNYVIVNRQPNPGGPFGAMWLSLS-KLSYGIHGTNDPSSIGK---AVSRGCVRMYNQD 147

Query: 349 IIDLDVWLLKDT 360
           ++ L   +   T
Sbjct: 148 VLQLASMVPNGT 159


>gi|167567988|ref|ZP_02360904.1| bacteriophage-acquired protein [Burkholderia oklahomensis EO147]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
            + +             +L R
Sbjct: 61  YKVLASGQRDPKHLTDADLAR 81


>gi|163855444|ref|YP_001629742.1| peptidoglycan binding-like domain-containing protein [Bordetella
           petrii DSM 12804]
 gi|163259172|emb|CAP41472.1| protein with peptidoglycan binding-like domain [Bordetella petrii]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 5/166 (3%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
            +    R  +          +  P  +    A T    A  + I   GG   L  + L  
Sbjct: 77  STEPGLRLTSARTTASEAAAAQTPGPAARHSAPTGAQAATLRAI---GGSGSL-TQELRY 132

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
              S  V+ L+ RL ++  L     +   F      AV  FQ  +G   +GMVD  T + 
Sbjct: 133 RVKSPQVRELQVRLRLAKYLALY-DVDDRFGMLTREAVLKFQRDNGFRATGMVDQQTWDT 191

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           + +   +       N          +       +      +   + 
Sbjct: 192 LLLRSRVPTEAELNNTDVGSWFTAPEQTGYMRELQHRLRQVGLYQG 237


>gi|294664257|ref|ZP_06729629.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
            aurantifolii str. ICPB 10535]
 gi|292605967|gb|EFF49246.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
            aurantifolii str. ICPB 10535]
          Length = 1268

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 10/153 (6%)

Query: 63   IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP-------LHLGNSSVSVQRLR 115
             ++  P  +  ++     A +             +P  P       L LG+    V+ L+
Sbjct: 901  AEAVAPPSASASVPSVGSAASTLTSREEALTQATVPTPPSFQEVEGLRLGDRGQEVEFLQ 960

Query: 116  ERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
             RL      G    +   +  F    E AVK FQ   GL  +G+        ++     R
Sbjct: 961  YRLQQVDARGPDGQAVPQNGHFGPETEHAVKQFQQDQGLPATGIAGQDLDAVLSQAQHAR 1020

Query: 173  IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
               L+     +     ++ G +   V  P    
Sbjct: 1021 RDGLKSTAPALANAAVEQGGEQQARVVTPQNEA 1053


>gi|167908454|ref|ZP_02495659.1| bacteriophage-acquired protein [Burkholderia pseudomallei NCTC
           13177]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 3/113 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
              +             +L R    L   +     +  + +  +  +++G+  
Sbjct: 61  YRVLASGQRDPKHLTDADLARAAATLGVSLACVRAVNEVESRGVGLLDDGRPK 113


>gi|167839687|ref|ZP_02466371.1| bacteriophage-acquired protein [Burkholderia thailandensis MSMB43]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|332709864|ref|ZP_08429820.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332351235|gb|EGJ30819.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 393

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 62/225 (27%), Gaps = 15/225 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    L  G+   +V  ++ +L   G    +   +  F    E AV  FQ  +GL   G+
Sbjct: 144 VTQSGLRRGSRGSAVTEVQRQLRQLGYF--NADPTGYFGPVTEQAVIEFQTDYGLRADGI 201

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           V S T   ++  +  + +   +   +I          + +    P    E     +    
Sbjct: 202 VGSQTRAELSNALVTQSQPFGLPPDQIPLPPADFNSQQPIAFGTPIRRSELRPGDRGPEV 261

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             +      R                  V    I   +++     D Q L+   +     
Sbjct: 262 RRLQEELRSRGFNPGAIDGRYGEETEDAVFKFQIRNNNLLPTGIADLQTLQALGLI---- 317

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNT 321
               +  E       E   ++        N ++  + +       
Sbjct: 318 ---NINPEA------EKNRYVVVIPIPNDNVLSEVRNQMKLTGGI 353


>gi|150020444|ref|YP_001305798.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosipho melanesiensis
           BI429]
 gi|149792965|gb|ABR30413.1| ErfK/YbiS/YcfS/YnhG family protein [Thermosipho melanesiensis
           BI429]
          Length = 415

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 16/140 (11%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E  K+     + +G     T      +  ++ N       S +       L +       
Sbjct: 240 EPDKIYAGMKLDIG-----TVQFTEGLTSVVVNLA----TSRLAVYYAKKLVKVFPVAIG 290

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
            +  M       +   ++D        +I       IN + +  ++  +     +H T +
Sbjct: 291 RSDSMPPGIYWILDK-QIDPALYWFGEYIP--PRSPINGLGTRFLQLSNP-TYGIHGTTK 346

Query: 329 PILFNNVVRFETSGCVRVRN 348
           P       R  + GCVR+ N
Sbjct: 347 PWEIG---RRISHGCVRMFN 363


>gi|229524431|ref|ZP_04413836.1| general secretion pathway protein A [Vibrio cholerae bv. albensis
           VL426]
 gi|229338012|gb|EEO03029.1| general secretion pathway protein A [Vibrio cholerae bv. albensis
           VL426]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFALLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|254291645|ref|ZP_04962433.1| general secretion pathway protein A [Vibrio cholerae AM-19226]
 gi|150422417|gb|EDN14376.1| general secretion pathway protein A [Vibrio cholerae AM-19226]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFALLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|153831064|ref|ZP_01983731.1| general secretion pathway protein A [Vibrio cholerae 623-39]
 gi|148873460|gb|EDL71595.1| general secretion pathway protein A [Vibrio cholerae 623-39]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFALLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|56420887|ref|YP_148205.1| hypothetical protein GK2352 [Geobacillus kaustophilus HTA426]
 gi|56380729|dbj|BAD76637.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 168

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 11/109 (10%)

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD--PG-- 303
             +I    +  L        +    +      ++  E +   + +     +R+   PG  
Sbjct: 27  PLVIVNKAINKLALVRDGRIEAVYPVATGVNADLTPEGMFTVTVKAKYPYYRKKNIPGGA 86

Query: 304 KINAMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             N + +  I F           +H T  P        + + GCVR+ N
Sbjct: 87  PNNPLGARWIGFNARGTDGRIYGIHGTNNPASIGQ---YVSQGCVRMHN 132


>gi|323165397|gb|EFZ51184.1| peptidoglycan-binding domain 1 domain protein [Shigella sonnei 53G]
          Length = 282

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 6/112 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +       S     +     S++N  +      ++   +    P   +   
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQ--Y 217

Query: 76  AQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDP 126
           A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD 
Sbjct: 218 AAMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDG 267


>gi|297624717|ref|YP_003706151.1| peptidoglycan-binding domain 1 protein [Truepera radiovictrix DSM
           17093]
 gi|297165897|gb|ADI15608.1| Peptidoglycan-binding domain 1 protein [Truepera radiovictrix DSM
           17093]
          Length = 336

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLF 145
            ++    W  L    +  G+++ +V+ ++++L    G    +  +   F    E+AVK F
Sbjct: 101 GVVGPSTWGALIT-VVRRGDNNNAVRAVQDQLANRYGY---ALAVDGVFGPATEAAVKSF 156

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPV 169
           Q   GL   G+V  ST  A+   V
Sbjct: 157 QASWGLAQDGVVGPSTWNALVTNV 180



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 8/81 (9%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           ++  +  WP +       G++  +V  ++  L   G    +  +  +F +  ESAV+ FQ
Sbjct: 41  ELGPQATWPTV-----RRGDAGRTVVTVQYLLRHHG---GNLSVDGSFGSATESAVRSFQ 92

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
               L   G+V  ST  A+  
Sbjct: 93  SARNLTVDGVVGPSTWGALIT 113


>gi|153803634|ref|ZP_01958220.1| general secretion pathway protein A [Vibrio cholerae MZO-3]
 gi|124120834|gb|EAY39577.1| general secretion pathway protein A [Vibrio cholerae MZO-3]
          Length = 529

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFALLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|229820604|ref|YP_002882130.1| SCP-like extracellular [Beutenbergia cavernae DSM 12333]
 gi|229566517|gb|ACQ80368.1| SCP-like extracellular [Beutenbergia cavernae DSM 12333]
          Length = 349

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           LP   L +G S   V+RL+  L   G       +  A+     + V  FQ + GL   G+
Sbjct: 187 LPPGWLGIGASGPDVERLQADLAALG---HDVAVDGAYGPRTSAGVSAFQQQAGLAVDGV 243

Query: 157 VDSSTLE 163
              +TLE
Sbjct: 244 AGPATLE 250


>gi|209886508|ref|YP_002290365.1| ErfK/YbiS/YcfS/YnhG family protein [Oligotropha carboxidovorans
           OM5]
 gi|209874704|gb|ACI94500.1| ErfK/YbiS/YcfS/YnhG family protein [Oligotropha carboxidovorans
           OM5]
          Length = 265

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 56/203 (27%), Gaps = 52/203 (25%)

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             G+ P  +    T+         R+R+  VN          +     ++V+     L  
Sbjct: 61  AWGVQPDAVQSRDTMSEDAALP-DRLRRAVVN-------YPSREAPGTLIVDTRHTYLYF 112

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           +      +R  V VGR    T      I+R    P W  P  +I +              
Sbjct: 113 ILGNDRAIRYGVGVGREG-FTWSGVQSISRKAEWPDWHPPAQMIARQ------------- 158

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP 327
                                     P        G  N + +  +     +   +H T 
Sbjct: 159 --------------------------PYLPRFVAGGPGNPLGARAMYLGHSD-YRIHGTN 191

Query: 328 EPILFNNVVRFETSGCVRVRNII 350
           +P        F +SGC+R+ N  
Sbjct: 192 DPSTIGK---FVSSGCIRLTNAD 211


>gi|134288769|ref|YP_001111074.1| gp43, bacteriophage-acquired protein [Burkholderia phage phiE202]
 gi|167619956|ref|ZP_02388587.1| bacteriophage-acquired protein [Burkholderia thailandensis Bt4]
 gi|134131982|gb|ABO60730.1| gp43, bacteriophage-acquired protein [Burkholderia phage phiE202]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|118593452|ref|ZP_01550832.1| hypothetical protein SIAM614_16872 [Stappia aggregata IAM 12614]
 gi|118433931|gb|EAV40589.1| hypothetical protein SIAM614_16872 [Stappia aggregata IAM 12614]
          Length = 173

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 22/68 (32%), Gaps = 5/68 (7%)

Query: 282 FVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                +    + P+       G   N M    +   + N   +H T  P       R  +
Sbjct: 90  DWAPSEEVRRDFPHLPTVIRGGAPNNPMGVAAMTLSNGN-YAIHGTNRPGSIG---RAVS 145

Query: 341 SGCVRVRN 348
            GC+R+ N
Sbjct: 146 YGCIRMAN 153


>gi|118443217|ref|YP_877472.1| spore-cortex-lytic enzyme precursor [Clostridium novyi NT]
 gi|118133673|gb|ABK60717.1| spore-cortex-lytic enzyme precursor [Clostridium novyi NT]
          Length = 241

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G+ +  V  ++ RL           L   +      AVK FQ ++GL   G
Sbjct: 34  SMKTSVYKYGSKNNIVTEIQRRLKAWDYY--EGALDGKYGYETYLAVKDFQRKNGLTVDG 91

Query: 156 MVDSSTLEAMNVP 168
           +V  STL A+ + 
Sbjct: 92  IVGDSTLSALGIN 104


>gi|295703434|ref|YP_003596509.1| hypothetical protein BMD_1298 [Bacillus megaterium DSM 319]
 gi|294801093|gb|ADF38159.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 170

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 51/164 (31%), Gaps = 17/164 (10%)

Query: 206 EAVENGKVGLRSTVIVGRV---DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             V+ G+     +                 S  + +      +IP ++  K+++      
Sbjct: 3   YIVKRGETWQSISGDYRTPVEDLWMANPFVSH-STLKPGQVIIIP-NLPDKELIPYTIHV 60

Query: 263 PQYLKDNNIHMIDEK----GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
             ++ +  + +           +   ++   +P     I  ++P       +  +    +
Sbjct: 61  --FIAEKQLELRRNNIIQKVYPIAAGKMLSATPTGDFVIVNREPNPGGPFGTMWLSLS-K 117

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            +  +H T +P          + GC+R+ N    +L   +   T
Sbjct: 118 KSYGIHGTNDPSSIGK---AVSKGCIRMYNAQVNELAQIVPNGT 158


>gi|53722098|ref|YP_111083.1| bacteriophage-acquired protein [Burkholderia pseudomallei K96243]
 gi|134288699|ref|YP_001111195.1| gp45, bacteriophage-acquired protein [Burkholderia phage phiE12-2]
 gi|167821706|ref|ZP_02453386.1| bacteriophage-acquired protein [Burkholderia pseudomallei 91]
 gi|167914793|ref|ZP_02501884.1| bacteriophage-acquired protein [Burkholderia pseudomallei 112]
 gi|52212512|emb|CAH38538.1| putative bacteriophage-acquired protein [Burkholderia pseudomallei
           K96243]
 gi|134132084|gb|ABO60759.1| gp45, bacteriophage-acquired protein [Burkholderia phage phiE12-2]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|253682164|ref|ZP_04862961.1| spore cortex-lytic enzyme [Clostridium botulinum D str. 1873]
 gi|253561876|gb|EES91328.1| spore cortex-lytic enzyme [Clostridium botulinum D str. 1873]
          Length = 238

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G     V  ++ RL        +  L   +      AVK FQ ++ L   G
Sbjct: 34  AVKTSVYKYGTKDSIVTEIQRRLKAWDYY--NGELDGKYGYETYLAVKEFQRKNDLTVDG 91

Query: 156 MVDSSTLEAMNVP 168
           +V   TL A+ + 
Sbjct: 92  IVGDYTLAALGIN 104


>gi|153956184|ref|YP_001396949.1| spore cortex-lytic enzyme precursor [Clostridium kluyveri DSM 555]
 gi|219856509|ref|YP_002473631.1| hypothetical protein CKR_3166 [Clostridium kluyveri NBRC 12016]
 gi|146349042|gb|EDK35578.1| Spore cortex-lytic enzyme precursor [Clostridium kluyveri DSM 555]
 gi|219570233|dbj|BAH08217.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 230

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V +++ +L   G    +  +   +     +AV+ FQ ++GL+  G+V  +TL A
Sbjct: 44  GSRGDVVIKIQTKLRDWGYY--NGSVDGIYGYQTYTAVRYFQSKNGLNVDGVVGDATLSA 101

Query: 165 MNVPVD 170
           + + V 
Sbjct: 102 LAINVS 107


>gi|42519030|ref|NP_964960.1| hypothetical protein LJ1104 [Lactobacillus johnsonii NCC 533]
 gi|41583317|gb|AAS08926.1| hypothetical protein LJ_1104 [Lactobacillus johnsonii NCC 533]
          Length = 483

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    + V V  L++ L   G +     ++  F+   ++AV  FQ  HGL   G+V+   
Sbjct: 394 LKKSMTGVDVATLQQYLTALGYMPK--HVTGVFNDETKNAVIEFQKAHGLTADGIVNGQV 451

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              + + V  +++     L +   L  ++M  
Sbjct: 452 QAQLYLAVAQKLQDDNPALKKAMSLNLKEMED 483


>gi|220929205|ref|YP_002506114.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
 gi|219999533|gb|ACL76134.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium cellulolyticum H10]
          Length = 236

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 88  ILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           ++  G +         L  G+    V  ++ERL   G    +   S  ++  ++ A+  F
Sbjct: 153 VIRNGPFGPFGTGFRNLKPGDRGSDVLAVQERLKQLGYF--NGYESGIYEDDLKEAIFQF 210

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  H L     + +    AM   
Sbjct: 211 QKDHNLKVKITITTVDYNAMGYT 233



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 308 MASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN 348
                +    R     +H T +        R  + GC+R+ N
Sbjct: 98  FGGRWLGLNVRWGNYGIHGTQDESSIG---RSASHGCIRMYN 136


>gi|254193147|ref|ZP_04899582.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           S13]
 gi|254196637|ref|ZP_04903061.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|254197135|ref|ZP_04903558.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|169649901|gb|EDS82594.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           S13]
 gi|169653380|gb|EDS86073.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
 gi|169653877|gb|EDS86570.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei S13]
          Length = 270

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|229514071|ref|ZP_04403533.1| general secretion pathway protein A [Vibrio cholerae TMA 21]
 gi|229349252|gb|EEO14209.1| general secretion pathway protein A [Vibrio cholerae TMA 21]
          Length = 529

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|229521273|ref|ZP_04410693.1| general secretion pathway protein A [Vibrio cholerae TM 11079-80]
 gi|229341805|gb|EEO06807.1| general secretion pathway protein A [Vibrio cholerae TM 11079-80]
          Length = 529

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 424 ERYRIARQWLEPLWNGQFSLLWQAGFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 482 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|226227862|ref|YP_002761968.1| hypothetical protein GAU_2456 [Gemmatimonas aurantiaca T-27]
 gi|226091053|dbj|BAH39498.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 282

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 64/224 (28%), Gaps = 43/224 (19%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           ++ + L+A      LR    +                 Y++V+I    +   +   V   
Sbjct: 51  IEQAVLQAGAGTDSLRAELAEST------PPPASANAPYLVVSIAERRVWYKQGDSVLFT 104

Query: 217 STVIVGRVDRQ------------TPILHSRINRIMFNPYWVIP-------RSIIQKDMMA 257
           + V  G   +             TP     + R    P W+ P        +     ++ 
Sbjct: 105 APVATGSGKQMVVKGSTKVMRFETPRGRLVVQRRDSAPAWIPPDWHFQEQANKRGMGLVQ 164

Query: 258 LLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNSPEPP----NFIFRQDPGKIN---- 306
           L+R  P  LKD +   +                  + +      +      P   N    
Sbjct: 165 LVRGTPIKLKDGSSIAVRGNDVVRVGSDGSAKPLTASDGREIVADGRVVIPPFGTNQRKY 224

Query: 307 --AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              + + ++     +   +H T  P          + GCVR+RN
Sbjct: 225 PDVLGTRRLYL--GDGYALHGTNNPKSVGQ---AVSHGCVRLRN 263


>gi|326332132|ref|ZP_08198416.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950103|gb|EGD42159.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 289

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE- 163
           G+S   V+ L+ RL   G    + G++  +      AV  FQ + G+  +G VD +TL+ 
Sbjct: 85  GDSGDDVRDLQARLKQIGWF--NAGVTGFYGNVTTEAVSGFQAKRGIAVTGFVDQTTLDR 142

Query: 164 --AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             AM               +   KL  + +  R + ++   + L  V  G V +   V  
Sbjct: 143 LHAMTREPTEAELTNAPPPVPAGKLDPRCLTGRVMCIDKSTSMLRWVVGGAVQMSVEVRF 202

Query: 222 GRVDRQTPILHSRI 235
           G  +  T      +
Sbjct: 203 GSQELPTREGQFSV 216


>gi|317509441|ref|ZP_07967059.1| N-acetylmuramoyl-L-alanine amidase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252270|gb|EFV11722.1| N-acetylmuramoyl-L-alanine amidase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 409

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 39/137 (28%), Gaps = 29/137 (21%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV----------------------------A 133
           L  G+    V  +R  L   G L    G +                              
Sbjct: 4   LRRGDIGPEVIAVRAVLEELGFLHSRNGSANPNLASATAARTEFGSVASANGSETKVEAL 63

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           FDA ++ AV+ FQ   G+   G+V  +T          R+     +      ++   +  
Sbjct: 64  FDAELDLAVRAFQQHRGMLVDGIVGPAT-SQCLREASFRLGARVTSYQPSAPMVGDDVAD 122

Query: 194 RYVLVNIPAASLEAVEN 210
               ++     +  V+ 
Sbjct: 123 LQARLHDLGFYMGLVDG 139



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V  L+ RL   G       +   F     + +  +Q   GL P G+   +TL ++
Sbjct: 115 MVGDDVADLQARLHDLGFYM--GLVDGYFGPKTHNGLVSYQREFGLTPDGICGPATLRSL 172

Query: 166 N 166
           N
Sbjct: 173 N 173


>gi|330839278|ref|YP_004413858.1| 3D domain-containing protein [Selenomonas sputigena ATCC 35185]
 gi|329747042|gb|AEC00399.1| 3D domain-containing protein [Selenomonas sputigena ATCC 35185]
          Length = 200

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    SV+ +++ LI  G L               +A+  FQ  +GL+  G+    T 
Sbjct: 30  KEGMRGDSVRAVQKLLIGRGYL-AEGEDDGVCGKKTVTAITKFQQENGLEVDGICGQMTY 88

Query: 163 EAMNVPVDLRI 173
            A++   +  +
Sbjct: 89  RALSGGEEPPV 99


>gi|260886933|ref|ZP_05898196.1| LysM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260862995|gb|EEX77495.1| LysM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 196

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 1/71 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    SV+ +++ LI  G L               +A+  FQ  +GL+  G+    T 
Sbjct: 26  KEGMRGDSVRAVQKLLIGRGYL-AEGEDDGVCGKKTVTAITKFQQENGLEVDGICGQMTY 84

Query: 163 EAMNVPVDLRI 173
            A++   +  +
Sbjct: 85  RALSGGEEPPV 95


>gi|153007400|ref|YP_001368615.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559288|gb|ABS12786.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 241

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  + +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHLLYYVLPGGEALRYGIGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WSGTANVQYKKQWPVWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRN--NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  F +       +H +PE       +   +SGC+R
Sbjct: 164 -KPELAKYRNGQEPGPQNPLGARALYIFQNGQDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|84496825|ref|ZP_00995679.1| hypothetical protein JNB_04860 [Janibacter sp. HTCC2649]
 gi|84383593|gb|EAP99474.1| hypothetical protein JNB_04860 [Janibacter sp. HTCC2649]
          Length = 340

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 3/84 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I      P +    +  G +   V  ++  L   G    S  +   F +     VK FQ
Sbjct: 199 KIGGTTPAPTIAWSTVKSGATGFRVTTIQHLLKARG---QSLTVDGVFGSVTVGKVKAFQ 255

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVD 170
               L   G+V   T  A+ V V 
Sbjct: 256 TSRSLLADGVVGPKTWAALVVTVK 279



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 9/93 (9%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           KA    + +L+ G      W  L +  +  G+S  +V   ++ L   G    +      F
Sbjct: 252 KAFQTSRSLLADGVVGPKTWAALVV-TVKSGSSGQAVIGAQKALTARGY---TCTADGVF 307

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +   S  K FQ   GL   G+V   T   + +
Sbjct: 308 GSVTVSKAKAFQTSRGLLADGVVGPVTWAKLTI 340


>gi|254713367|ref|ZP_05175178.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M644/93/1]
 gi|254716275|ref|ZP_05178086.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M13/05/1]
 gi|261218053|ref|ZP_05932334.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261321097|ref|ZP_05960294.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|260923142|gb|EEX89710.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261293787|gb|EEX97283.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
          Length = 241

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNGQEPGPSNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|323136177|ref|ZP_08071259.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322398251|gb|EFY00771.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 185

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 46/170 (27%), Gaps = 44/170 (25%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +    ++++     L  V    V +   V V +  ++     + I+ +  NP W  
Sbjct: 45  FATDVEPGAIVISASQRRLFYVVGNGVAISYPVAVPKRGKE-WSGVTSISSMHVNPDWTP 103

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P ++                                         + P        G   
Sbjct: 104 PAAV---------------------------------------KADHPELPDLIPGGAPN 124

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           N M +  +         +H T   +  +      + GC+R+RN  D+   
Sbjct: 125 NPMGTRAMLLDRSE-VAIHGTTNKMRASIGT-AASYGCIRMRN-EDVADL 171


>gi|295104692|emb|CBL02236.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii SL3/3]
          Length = 870

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 4/143 (2%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLR--ERLIISGDLD-PSKGLSVAFDAYVESAVKLFQ 146
             G     P  PL  G S  +V+ ++   ++  +      S  +   F A   +AV+ FQ
Sbjct: 499 DNGTPNAYPGTPLREGASGQNVRLVQFWLKIARTVYTSLESVTVDGKFGAGTAAAVRRFQ 558

Query: 147 MRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
              GL   G+V  +T + +  V  D+  R L  +L   +     + G     V      L
Sbjct: 559 RYFGLTADGVVGRTTWQKLYEVYNDIANRLLSSSLRPGEYPGVLRSGSTGTPVRELQFYL 618

Query: 206 EAVENGKVGLRSTVIVGRVDRQT 228
             +   +  +    I G+    T
Sbjct: 619 YLMSAYESSIPPVSIDGKFGADT 641



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD---PS 127
           S + +A+           LS G W       L  G S  +V++++  L      D   PS
Sbjct: 395 SVKDLAELTSEGETSTGTLSNGTWN---GTVLSTGASGSAVEQVQFWLNTLAQYDSAIPS 451

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +   +     +AV+ FQ ++GL   G+V  +T + +
Sbjct: 452 VTVDGVYGTATANAVRAFQRKYGLTVDGIVGQTTWKEL 489



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL  G+   +V  L+ +L  I+ D        +   F + + + V+ FQ +  L   
Sbjct: 319 PGTPLRQGSRGTAVFTLQRQLNRIAKDYPFLGKLTVDGVFGSRMAATVRAFQKQFNLTAD 378

Query: 155 GMVDSSTLEAMN 166
           G+V   T   ++
Sbjct: 379 GVVGRQTWYKIS 390



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDILSRGGWPELPI 99
                 V+ +F    A           + +   + +T  +K    Y DI +R     L  
Sbjct: 536 SLESVTVDGKFGAGTAAAVRRFQRYFGLTADGVVGRTTWQKLYEVYNDIANRLLSSSLRP 595

Query: 100 R----PLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLD 152
                 L  G++   V+ L+  L +    +   P   +   F A  E AV+ +Q   GL 
Sbjct: 596 GEYPGVLRSGSTGTPVRELQFYLYLMSAYESSIPPVSIDGKFGADTERAVRAYQQFAGLT 655

Query: 153 PSGMVDSSTLEAM 165
             G+V  +T  ++
Sbjct: 656 VDGVVGRTTWNSL 668



 Score = 44.3 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 39/178 (21%)

Query: 26  LVEKPIHASVLDEIINESYHSIV--NDRFDNFLARVDMGIDSDIPIISKETI--AQTEKA 81
           L+   +       ++            +F  +L       +S IP +S +    A TE+A
Sbjct: 588 LLSSSLRPGEYPGVLRSGSTGTPVRELQFYLYLMS---AYESSIPPVSIDGKFGADTERA 644

Query: 82  IAFYQD--------ILSRGGWPEL---------------------PIRPLHLGNSSVSVQ 112
           +  YQ         ++ R  W  L                     P  PL +G+S  +V 
Sbjct: 645 VRAYQQFAGLTVDGVVGRTTWNSLYGRASQLRSSGPVVTLKRLPYPGTPLTVGSSGKAVL 704

Query: 113 ---RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               L  R+        +  L+  +     +A +  Q   GL+ +G+ D+ T  A+  
Sbjct: 705 YYNLLLLRIAYYFSSVEAPPLADRYTDETATATRSAQQLLGLEQTGIADADTWTAVEA 762


>gi|119510785|ref|ZP_01629911.1| hypothetical protein N9414_03905 [Nodularia spumigena CCY9414]
 gi|119464548|gb|EAW45459.1| hypothetical protein N9414_03905 [Nodularia spumigena CCY9414]
          Length = 84

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               V+++++ L+ +G L  +  ++  +D   ESAV+ FQ   GL   G+V   T   + 
Sbjct: 24  QGEDVRKVQQALVNAGFLSAN-QINGIYDNDTESAVEKFQEEKGLSQDGVVGPQTRRLLG 82

Query: 167 VP 168
           + 
Sbjct: 83  IS 84


>gi|16760952|ref|NP_456569.1| hypothetical protein STY2218 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|25323524|pir||AB0757 probable exported protein STY2218 [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503250|emb|CAD02376.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
          Length = 309

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W +P +  ++
Sbjct: 98  IVVNVAEMRLYYYPAGTNTVEVLPIGIGQAGRETPRNWVTAVERKQDGPVW-VPTANTRR 156

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           +                                   + E          G  N M    I
Sbjct: 157 E----------------------------------YAKEGKTLPAMVPAGPDNPMGLYAI 182

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  T  H T     F   +R  + GC+R+RN
Sbjct: 183 YIGRLYAT--HGTNAN--FGIGLR-VSQGCIRLRN 212


>gi|304391839|ref|ZP_07373781.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303296068|gb|EFL90426.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 214

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 39/201 (19%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           + S + +    P   R    +  + +     +++     ++++     L  V      ++
Sbjct: 39  ISSMSWKEGRKPSKRRYMSDKSPIRKRMVRFDKQYSAGTIVIDTDERRLYFVTKRGRAMK 98

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             V VGR   +      +I R    P W  P     ++M+A +++      +  I +   
Sbjct: 99  YGVGVGRDGFE-WNGTHKITRKAKWPSWTPP-----QEMIARVKR------EQGIKLKSF 146

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNV 335
                          +      R      N M +     Y  +  Y +H T +P      
Sbjct: 147 --------------YKGGPKNKRV-----NPMGAR--GLYIGSTIYRIHGTNQPWTIGKA 185

Query: 336 VRFETSGCVRVRN--IIDLDV 354
           +   +SGC+R+ N  + DL  
Sbjct: 186 M---SSGCIRMANDDVSDLYE 203


>gi|59712850|ref|YP_205626.1| general secretion pathway protein A [Vibrio fischeri ES114]
 gi|59480951|gb|AAW86738.1| general secretion pathway protein A [Vibrio fischeri ES114]
          Length = 518

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           ++  + +  + +  + + +      W  P +  R +  G+   ++  L   L  +  L+ 
Sbjct: 407 LLPSKRVEVSHQWFSRHWNGAYVQLWQKPIITERAMRKGDEGEAIFALNHLLSTA--LEQ 464

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
               S  FD   E  VK FQ   GL   G+  SSTL  ++   +     LQ
Sbjct: 465 PMIESDFFDEKTEQQVKQFQEIFGLKEDGIAGSSTLMWLDSVTNANAPLLQ 515


>gi|39936627|ref|NP_948903.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|192292450|ref|YP_001993055.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39650483|emb|CAE29006.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
 gi|192286199|gb|ACF02580.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 239

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 52/177 (29%), Gaps = 46/177 (25%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           + +L   L R     + +     ++V+ P   L  V  G   +R  + VGR D  T    
Sbjct: 74  VAELPARLKRQIVAYQTREAPGTIVVDTPNTYLYYVLGGGRAIRYGIGVGR-DGFTWSGV 132

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
             + R    P W  P  +I +           YL  +                       
Sbjct: 133 KSVARKAEWPDWTPPPEMIARQP---------YLPRH----------------------- 160

Query: 293 PPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                     G  N + +  +        Y +H T  P          +SGC+R+ N
Sbjct: 161 -------MAGGPGNPLGARAMYL--GGTVYRIHGTNAPSTIGT---HVSSGCIRLTN 205


>gi|325921073|ref|ZP_08182950.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
 gi|325548461|gb|EGD19438.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
          Length = 1267

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 102  LHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG+    V+ L+ RL      G    +      +    E AV+ FQ   GL  +G+  
Sbjct: 948  LRLGDRGREVEFLQYRLQQLDARGPNGQAVPQDGHYGPETEHAVRQFQQDQGLPATGIAG 1007

Query: 159  SSTLEAMNVPVDLRIRQLQ 177
                 A++     R   L+
Sbjct: 1008 QELDAALSQAQHARRVSLK 1026


>gi|153007497|ref|YP_001368712.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559385|gb|ABS12883.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 206

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 8/165 (4%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V      + A+ + K+  +    + +           ++      Y ++P     + 
Sbjct: 33  YSSVTDAGYVVPAIPSEKIQAQYRRQIVKYPTDEAPGTIIVDTREKFLYLIMPEGKAMRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGREGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            Y++       +H TPE       +   +SGC+R+  ++I+DL  
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMNQDIMDLYD 194


>gi|118470609|ref|YP_889561.1| gp35 protein [Mycobacterium smegmatis str. MC2 155]
 gi|118171896|gb|ABK72792.1| gp35 protein [Mycobacterium smegmatis str. MC2 155]
          Length = 275

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 95  PELPIRPL------HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           P +P+                 V  L+ RL   G       +   F    E+AV+ FQ R
Sbjct: 200 PRVPVGEYIDVLLYRP-MEGAEVAELQRRLNALG---ADLVVDGIFGPLTEAAVRDFQRR 255

Query: 149 H-GLDPSGMVDSSTLEAMN 166
             GL   G+V  +T  A+N
Sbjct: 256 TPGLKVDGIVGPATAAALN 274


>gi|259508327|ref|ZP_05751227.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           efficiens YS-314]
 gi|259164084|gb|EEW48638.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           efficiens YS-314]
          Length = 406

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 23/162 (14%)

Query: 27  VEKPIHASVLDEIINESYHSIVN----DRFDNFLARVDMGIDS-DIPIISKETIAQTEKA 81
           V   +        + E  +++      + +D  +A         +      + +++  KA
Sbjct: 12  VSDVLRVGDRSPRVAEVRNTLARLGVIEGYDRDMATRSESRKFREEDTYFDDGLSEHLKA 71

Query: 82  IAFYQDILSRGGWPELPIRPLH--------------LGNS--SVSVQRLRERLIISGDLD 125
               + I+  G   +L +R L                GN+     V  ++  L   G   
Sbjct: 72  FQQARGIIPTGFIDDLTLRVLREASYTLGARVLSYQPGNNLVGDDVVEMQTHLQELGFY- 130

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             + +   F  Y  SAV  +Q+ +GL   G+    T+ A++ 
Sbjct: 131 -RERIDGRFGEYTHSAVMDYQLNYGLQVDGICGPDTIRALSR 171


>gi|163759276|ref|ZP_02166362.1| hypothetical protein HPDFL43_05910 [Hoeflea phototrophica DFL-43]
 gi|162283680|gb|EDQ33965.1| hypothetical protein HPDFL43_05910 [Hoeflea phototrophica DFL-43]
          Length = 236

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 63/204 (30%), Gaps = 10/204 (4%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           ++ L+ERL   G       +  A       AV+ FQ  HGL   G+    T  A++    
Sbjct: 4   IRDLQERLKALGY--NPGIVDGAMGPNTRKAVREFQADHGLGIDGVAGPRTWSALDR-AL 60

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R              +++ M  + +      ASL A       LRS        R    
Sbjct: 61  TRKGAPAGTARPTPPWVDEMMRRKGLHEGRDHASLSAW------LRSAGSAVDPARTPWC 114

Query: 231 LHSRINRIMFNPY-WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             +    I+       +P + +         ++ +      + +     K  +   V + 
Sbjct: 115 GDAVETAILRALPDEPVPANPMASINWLKFGREMKTPAFGAVLVFWRGSKSGWQGHVGFY 174

Query: 290 SPEPPNFIFRQDPGKINAMASTKI 313
             E           + NA+  TKI
Sbjct: 175 VGEDATHYHVLGGNQSNAITITKI 198


>gi|27379330|ref|NP_770859.1| hypothetical protein blr4219 [Bradyrhizobium japonicum USDA 110]
 gi|27352481|dbj|BAC49484.1| blr4219 [Bradyrhizobium japonicum USDA 110]
          Length = 217

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 +  R   G  N + +  I     +++  Y +H T +P          +SGC+R+
Sbjct: 124 QARLGPYPARVAGGPANPLGARGIYLFVGNKDTLYRIHGTNQPEYIGQ---AISSGCIRM 180

Query: 347 RN 348
           RN
Sbjct: 181 RN 182


>gi|15964713|ref|NP_385066.1| hypothetical protein SMc00039 [Sinorhizobium meliloti 1021]
 gi|15073891|emb|CAC45532.1| Hypothetical protein SMc00039 [Sinorhizobium meliloti 1021]
          Length = 242

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++  RQ+     R +           ++V+     L  V+ G   +R  V +GR     
Sbjct: 78  PEVPFRQIDPRFYRQEVGDPFGEAPGTIVVDTADRYLYLVQPGGRAMRYGVGLGREGFA- 136

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  +I +    +L +   Y  DN                   
Sbjct: 137 WSGRGLIQWKQKWPKWTPPNEMIARQ--PVLAK---YSADNGGM---------------- 175

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + S  +  F +  +    +H TPE           +SGCVR
Sbjct: 176 ------------PPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIGK---AVSSGCVR 220

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +    P
Sbjct: 221 MVNQDVIDLYDRVRNKAP 238


>gi|77463812|ref|YP_353316.1| putative lipoprotein [Rhodobacter sphaeroides 2.4.1]
 gi|77388230|gb|ABA79415.1| putative lipoprotein [Rhodobacter sphaeroides 2.4.1]
          Length = 342

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 53/202 (26%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++ V   R             +++N     L  V      +R  + VG+     
Sbjct: 57  PAIPTDRVPVQYQRQTVAYTSNEAPGTIVINPRERVLYFVTGKDTAIRYGIAVGKEG--- 113

Query: 229 PILHSRINRIMFN----PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    ++ N    P W  P  +I  D    L++                       
Sbjct: 114 --FQWSGTAVVANRRHWPTWTPPPEMI--DRKPELKK----------------------- 146

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETS 341
              W           Q  G  N + +  +            +H TPE     +     +S
Sbjct: 147 ---WEKG--------QPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHN---ASS 192

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  ++++DL   +     
Sbjct: 193 GCIRMINQDVVDLFERVPDGAK 214


>gi|319784591|ref|YP_004144067.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170479|gb|ADV14017.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 274

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 71/225 (31%), Gaps = 43/225 (19%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++    +R             ++V+     L  V  G   +R  V +GR   + 
Sbjct: 70  PAIPVDKIDPQFLRQIVPDPTGQKPGTIVVDTTGHFLYLVRPGGQAIRYGVGLGRAGFE- 128

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +I +     L+  P    +  +                 
Sbjct: 129 WSGDAVVQWKQKWPKWTPPDEMIARQ--PELK--PYSADNGGM----------------- 167

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +     + +  Y +H +PE           +SGCVR
Sbjct: 168 ------------PGGLKNPLGARALYLFQGNVDTLYRLHGSPEWRSIGKS---VSSGCVR 212

Query: 346 V--RNIIDLDVWLLKDTP-TWSRYHIEEVVKTRKTTPVKLATEVP 387
           +  ++IIDL   +   TP   +    + +V T     + +   VP
Sbjct: 213 LMNQDIIDLYDRVPSKTPVIVTSDASQPMVATANRQAIPIDAGVP 257


>gi|238025815|ref|YP_002910046.1| Gp43, bacteriophage-acquired protein [Burkholderia glumae BGR1]
 gi|237875009|gb|ACR27342.1| Gp43, bacteriophage-acquired protein [Burkholderia glumae BGR1]
          Length = 270

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LH  +    V  L+ RL  +G    +   +  +D   E AVK  Q   GL   G+    
Sbjct: 3   VLHFNDRGAEVGLLQSRLARAGY---TVPTTHIYDEATERAVKAVQAAAGLVVDGIAGPK 59

Query: 161 TLE 163
           T  
Sbjct: 60  TYA 62


>gi|291441499|ref|ZP_06580889.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291344394|gb|EFE71350.1| Muramoyl-pentapeptide carboxypeptidase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 245

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G S   V +L+ RL   G         +  +F     +A+K FQ  +GL   G+
Sbjct: 39  TRTLSQGASGADVTQLQIRLG--GYPGYGSVLAVDGSFGPATAAALKRFQSAYGLTADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPNTYSKL 105


>gi|239933149|ref|ZP_04690102.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           ghanaensis ATCC 14672]
          Length = 225

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G S   V +L+ RL   G         +  +F     +A+K FQ  +GL   G+
Sbjct: 19  TRTLSQGASGADVTQLQIRLG--GYPGYGSVLAVDGSFGPATAAALKRFQSAYGLTADGV 76

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 77  AGPNTYSKL 85


>gi|312200757|ref|YP_004020818.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311232093|gb|ADP84948.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 1236

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 5/80 (6%)

Query: 98  PIRPLHL--GNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R + L  G      V+ L++ L   G       L   +     SAV+ +Q   G+   
Sbjct: 12  PARSIRLLHGAVGGPDVELLQDALAAVGY--DPGRLDGIYGPLTASAVRRYQGVRGIAQD 69

Query: 155 GMVDSSTLEAMNVPVDLRIR 174
           G+V  +T EA+    +  + 
Sbjct: 70  GIVGPATWEALAAEPNSPLA 89



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 41/106 (38%), Gaps = 22/106 (20%)

Query: 81  AIAFY---QDILSRG-----GW--------PELPIRPLHL---GN-SSVSVQRLRERLII 120
           A+  Y   + I   G      W          L  RPL +   G  +   V+R++E L  
Sbjct: 56  AVRRYQGVRGIAQDGIVGPATWEALAAEPNSPLAGRPLRVTIAGAVAGDDVRRVQEGLSS 115

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +G       +   +      AV+ FQ+ HGL   G+V   TL A+ 
Sbjct: 116 AGF--DPGPIDAVYGPMTARAVRRFQLVHGLGADGIVGPRTLAALT 159


>gi|307322404|ref|ZP_07601761.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306891939|gb|EFN22768.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 231

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 42/172 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R K           ++V+  +  L  ++      R  + VGR D        ++ R  
Sbjct: 55  YWRTKVRFRTDEAPGTIIVDTNSKYLYYIDGPNRATRYGIGVGR-DGFGWSGVVKVGRKA 113

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  +  ++                                     +       
Sbjct: 114 EWPSWTPPAEMRVRE-----------------------------------RAKGRILPIT 138

Query: 300 QDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           Q  G  N + +  +      R+  + +H T +P      +   +SGC+R+ N
Sbjct: 139 QPGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTIGQNM---SSGCIRMMN 187


>gi|113953250|ref|YP_731240.1| ErfK/YbiS/YcfS/YnhG family protein [Synechococcus sp. CC9311]
 gi|113880601|gb|ABI45559.1| ErfK/YbiS/YcfS/YnhG family protein [Synechococcus sp. CC9311]
          Length = 195

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 43/156 (27%), Gaps = 49/156 (31%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           V++++    +  V  G+      V +G     TP    ++  +M NP +           
Sbjct: 68  VVLDLGRRQISVVREGQTLGPWPVAIGDPRTPTPSGVFKVENMMMNPQYQ---------- 117

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                            ++        R   G  + +    I F
Sbjct: 118 ---------------------------------STKSGKLHPKR---GPQSPLGHRWIGF 141

Query: 316 --YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                N   +H TP P          ++GCVR+ N 
Sbjct: 142 LRSGPNQFGIHGTPWPHWV-KTRAAVSNGCVRMLNA 176


>gi|25029491|ref|NP_739545.1| putative hydrolase [Corynebacterium efficiens YS-314]
 gi|23494780|dbj|BAC19745.1| putative hydrolase [Corynebacterium efficiens YS-314]
          Length = 406

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 56/162 (34%), Gaps = 23/162 (14%)

Query: 27  VEKPIHASVLDEIINESYHSIVN----DRFDNFLARVDMGIDS-DIPIISKETIAQTEKA 81
           V   +        + E  +++      + +D  +A         +      + +++  KA
Sbjct: 12  VSDVLRVGDRSPRVAEVRNTLARLGVIEGYDRDMATRSESRKFREEDTYFDDGLSEHLKA 71

Query: 82  IAFYQDILSRGGWPELPIRPLH--------------LGNS--SVSVQRLRERLIISGDLD 125
               + I+  G   +L +R L                GN+     V  ++  L   G   
Sbjct: 72  FQQARGIIPTGFIDDLTLRVLREASYTLGARVLSYQPGNNLVGDDVVEMQTHLQELGFY- 130

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             + +   F  Y  SAV  +Q+ +GL   G+    T+ A++ 
Sbjct: 131 -RERIDGRFGEYTHSAVMDYQLNYGLQVDGICGPDTIRALSR 171


>gi|294498085|ref|YP_003561785.1| hypothetical protein BMQ_1318 [Bacillus megaterium QM B1551]
 gi|294348022|gb|ADE68351.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 170

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 6/73 (8%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
           +P     I  ++P       +  +    + +  +H T +P          + GC+R+ N 
Sbjct: 90  TPTGDFIIVNREPNPGGPFGTMWLSLS-KKSYGIHGTNDPSSIGK---AVSKGCIRMYNA 145

Query: 350 I--DLDVWLLKDT 360
              +L   +   T
Sbjct: 146 QVNELAKIVPNGT 158


>gi|313113432|ref|ZP_07799021.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624159|gb|EFQ07525.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 867

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 5/130 (3%)

Query: 84  FYQDILSRGGWP-ELPIRPLHLGNSSVSVQRLR--ERLIISGDLDPSK-GLSVAFDAYVE 139
            ++ I S  G P   P   L  G S  +V+ ++   ++  +   + +   +   F +   
Sbjct: 492 QFRSIQSDNGTPNAYPGTALREGASGQNVRLVQFWLKIARTVYSNLNNITVDGKFGSATT 551

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL-EQKMGLRYVLV 198
           +AVK FQ   GL   G+V  +T   +    +    +L  + +R  +     + G     V
Sbjct: 552 AAVKRFQTYFGLTSDGVVGRTTWNKLYEVYNDIANKLLSSSLRPGEYPGVLRKGSSGTAV 611

Query: 199 NIPAASLEAV 208
                 L  +
Sbjct: 612 RELQFYLYLM 621



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G+S  +V+ L+  L +    + S     +   F A  E+AV+ +Q   GL   G
Sbjct: 599 PGVLRKGSSGTAVRELQFYLYLMSAYESSIPAIGIDGQFGASTEAAVRAYQRFAGLTVDG 658

Query: 156 MVDSSTLEAM 165
           +V  +T  ++
Sbjct: 659 IVGRTTWNSL 668



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            G W       L  G++  +V++L+     L       PS  +   +     + V+ FQ 
Sbjct: 415 DGTWG---GTVLRTGSTGSAVEQLQFWLNTLAQYESSIPSLTVDGVYGTGTANTVRAFQR 471

Query: 148 RHGLDPSGMVDSSTLEAM 165
           ++GL   G+V   T   +
Sbjct: 472 KYGLTVDGVVGRDTWTEL 489



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P+  G+S  +V  L+ +L  I+ D        +   F A + + V+ FQ +  L   
Sbjct: 319 PGSPIRQGDSGTAVFTLQRQLNRITKDYPFLGLLTVDGVFGAKMAATVRAFQKQFNLTAD 378

Query: 155 GMVDSSTLEAMN 166
           G+V       ++
Sbjct: 379 GVVGRQAWYKIS 390



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 81/264 (30%), Gaps = 47/264 (17%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIV--NDRFDNFLAR 58
           +VG    NK+   +       +   L+   +       ++ +          +F  +L  
Sbjct: 568 VVGRTTWNKLYEVYN-----DIANKLLSSSLRPGEYPGVLRKGSSGTAVRELQFYLYLMS 622

Query: 59  VDMGIDSDIPIISKETI--AQTEKAIAFYQD--------ILSRGGWPEL----------- 97
                +S IP I  +    A TE A+  YQ         I+ R  W  L           
Sbjct: 623 ---AYESSIPAIGIDGQFGASTEAAVRAYQRFAGLTVDGIVGRTTWNSLYDKASTLRTSG 679

Query: 98  ----------PIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
                     P  PL +G+S  +V     L +R+           LS  +      A + 
Sbjct: 680 PVVTLKRLPYPGAPLTVGSSGSAVLYYSLLLQRIAYYFTSVEKPPLSDQYTDETAVATRS 739

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR--YVLVNIPA 202
            Q   GL  +G+ D+ T  A+         ++  N  R         G       V    
Sbjct: 740 AQELLGLPETGIADADTWTAVEALSLQLAAEMP-NPDRSIGHGPVYPGRAIGAGSVGPDV 798

Query: 203 ASLEAVENGKVGLRSTVIVGRVDR 226
           A +E   NG+  L  T      +R
Sbjct: 799 AQVETWLNGRSCLYCTEGYVTENR 822



 Score = 44.3 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 11/83 (13%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRL------RERLI-ISGDLDPSKGLSVAFDAYVESAVKL 144
           G  P  P R +  G+    V ++      R  L    G        +  F     +AV+L
Sbjct: 779 GHGPVYPGRAIGAGSVGPDVAQVETWLNGRSCLYCTEGY----VTENRCFGPEETAAVRL 834

Query: 145 FQMRHGLDPSGMVDSSTLEAMNV 167
            Q R GL  +G VD  T  A+  
Sbjct: 835 AQQRAGLLVTGTVDRGTWAALQA 857


>gi|150396491|ref|YP_001326958.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150028006|gb|ABR60123.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 193

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 54/190 (28%), Gaps = 44/190 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                 ++     R +           ++VN     L  V+ G   +R  + VG   R T
Sbjct: 32  PQTARTRIDPRFRRQQVAYPGGEAPGTIVVNTAERYLYYVQGGGSAIRYGIGVGEEGR-T 90

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I R    P W    ++I+  +   L Q                           
Sbjct: 91  LKGRAKIGRKAEWPSWTPTANMIR--LKPHLAQ--------------------------- 121

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                  +      G  N + +  +      +     +H T EP          +SGC+R
Sbjct: 122 -------YAGGVSGGLHNPLGAAALYLYRGGNDTMFRLHGTNEPWSIGQ---AVSSGCIR 171

Query: 346 VRNIIDLDVW 355
           + N  D+   
Sbjct: 172 LTN-EDIVDL 180


>gi|170750298|ref|YP_001756558.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170656820|gb|ACB25875.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 221

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 47/168 (27%), Gaps = 46/168 (27%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R         G   ++V+     L  V  G   LR  V VGR    T      I      
Sbjct: 79  RETVAYNGPYGAGTIVVSTAERRLYYVLGGGQALRYGVGVGRPG-FTWGGVQTITMKREW 137

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P +++++                                        P+      
Sbjct: 138 PDWRPPATMLKRR---------------------------------------PDLPRYMK 158

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +      + Y +H + EP          +SGC+R+ N
Sbjct: 159 GGLENPLGARAMYL--GGSIYRIHGSNEPETIGT---AVSSGCIRMTN 201


>gi|113478151|ref|YP_724212.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110169199|gb|ABG53739.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 163

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G+    V +L+ +L + G        +  F    + AVK FQ   GL   G+V   T
Sbjct: 99  LHHGSRGHRVAKLQHQLGLMGYFHHP-RATGYFGHKTKYAVKAFQRDVGLRADGIVGPRT 157

Query: 162 LEAMN 166
             A+ 
Sbjct: 158 RAALG 162


>gi|313893325|ref|ZP_07826899.1| 3D domain protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442094|gb|EFR60512.1| 3D domain protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 202

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 32/189 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDKGQRGHHVSKVQTMLKHQGFLHDS--VDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            ST+ A+    +    +   +      L    +  +Y  V    AS             +
Sbjct: 82  PSTMNAL----EKMETRYGGH---GTALSHDGVPNKYSRVLTMEASA-----------YS 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                    T         I+     +IP                 Y++     + D+ G
Sbjct: 124 SQDPGNGNYTATGSRLKKGIVSVDPRLIPL------------GTRLYVEGYGYAVADDVG 171

Query: 279 KEVFVEEVD 287
             +    +D
Sbjct: 172 GAIKGHRID 180


>gi|303246394|ref|ZP_07332673.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
           JJ]
 gi|302492104|gb|EFL51979.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfovibrio fructosovorans
           JJ]
          Length = 246

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 55/203 (27%), Gaps = 47/203 (23%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +  +         D RI     +  R    +       Y+  N+P  +            
Sbjct: 78  LGKTARSPAGTAFDARIADFAASSNRYSIEVRLSRRRLYLYENLPDGTRRL------DRV 131

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
            TV V   D + P     +  I F P+W    ++  K+                      
Sbjct: 132 YTVAVPSRDMEAPQGWGVVTGISFEPWWH--PTLAMKERARK------------------ 171

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
                          +         PG + N M + KI         +H    P      
Sbjct: 172 ---------------KGKTLPTAVPPGVRENPMGTFKIFLSHGMGFRIHGNNNPRSIG-- 214

Query: 336 VRFETSGCVRVRNII--DLDVWL 356
            R  TSGC+R+RN    ++   L
Sbjct: 215 -RPVTSGCIRMRNDEGKEMAKLL 236


>gi|300855725|ref|YP_003780709.1| SpoIID-like domain-containing protein [Clostridium ljungdahlii DSM
           13528]
 gi|300435840|gb|ADK15607.1| SpoIID-like domain containing protein [Clostridium ljungdahlii DSM
           13528]
          Length = 852

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 7/97 (7%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
           +S ++    ++      +I        +   PL LG +S  V  L+  LI  G      G
Sbjct: 749 LSTKSYDSIKQF-----NITVNSKPLYISTLPLSLGMTSSDVAALQNALIKLGY--NVSG 801

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +  F    +SAV  FQ   G+  SG V + T  A+N
Sbjct: 802 ATGYFGTQTKSAVIAFQTDAGIPASGTVGTWTYSALN 838


>gi|320007688|gb|ADW02538.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces flavogriseus ATCC 33331]
          Length = 513

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++   V+ ++  L   G    +      F     +AV+ FQ   GLD  G V   T 
Sbjct: 379 KSGSTGSQVKAVQTLLNQQGY--RAGTEDGVFGTATGNAVRAFQTERGLDADGTVGPKTW 436

Query: 163 EAM 165
            A+
Sbjct: 437 TAL 439



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 11/96 (11%)

Query: 80  KAIAFYQDILSRGG-----WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           +A    + + + G      W  L        L  G S  +V+RL+  L  +  L  +   
Sbjct: 417 RAFQTERGLDADGTVGPKTWTALLSAGTTPALDTGASGDAVKRLQRALTAA--LGRTVAA 474

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             AF    + AV+ +Q    L   G V + T  A+ 
Sbjct: 475 DGAFGTNTDKAVRDYQSSRNLAVDGSVGTGTWAALQ 510


>gi|188993381|ref|YP_001905391.1| putative peptidoglycan binding protein [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735141|emb|CAP53353.1| putative peptidoglycan binding protein [Xanthomonas campestris pv.
           campestris]
          Length = 453

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
              L        V+ L+E+L   G LD    +   +    E+AV+ FQ  + L    G  
Sbjct: 253 DGVLKRNEQGAPVKELQEKLSKLGYLDAKDAI-GTYGPKTEAAVEKFQQENRLKGVDGKA 311

Query: 158 DSSTLEAMNVPVD 170
              TL +++  V 
Sbjct: 312 GPETLASIDKNVQ 324


>gi|221639666|ref|YP_002525928.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides KD131]
 gi|221160447|gb|ACM01427.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 342

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 53/202 (26%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++ V   R             +++N     L  V      +R  + VG+     
Sbjct: 57  PAIPTDRVPVQYQRQTVAYTSNEAPGTIVINPRERVLYFVTGKDTAIRYGIAVGKEG--- 113

Query: 229 PILHSRINRIMFN----PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    ++ N    P W  P  +I  D    L++                       
Sbjct: 114 --FQWSGTAVVANRRHWPTWTPPPEMI--DRKPELKK----------------------- 146

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETS 341
              W           Q  G  N + +  +            +H TPE     +     +S
Sbjct: 147 ---WEKG--------QPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHN---ASS 192

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  ++++DL   +     
Sbjct: 193 GCIRMINQDVVDLFERVPDGAK 214


>gi|146277624|ref|YP_001167783.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555865|gb|ABP70478.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 344

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 55/202 (27%), Gaps = 53/202 (26%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++ V   R             +++N     L  +      +R  + VG+     
Sbjct: 57  PAIPTERVPVQYQRQSVAYTSNEPPGTIVINPRERVLYFITGEDTAIRYGIAVGKEG--- 113

Query: 229 PILHSRINRIMFN----PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    ++ N    P W  P  +I++                              E
Sbjct: 114 --FQWSGTAVVANRRHWPTWTPPPEMIERK----------------------------PE 143

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETS 341
              W           Q  G  N + +  +            +H TPE     +     +S
Sbjct: 144 LARWEKG--------QPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHN---ASS 192

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  +++IDL   +     
Sbjct: 193 GCIRMINQDVIDLFERVPDGAK 214


>gi|118588576|ref|ZP_01545984.1| hypothetical protein SIAM614_17759 [Stappia aggregata IAM 12614]
 gi|118438562|gb|EAV45195.1| hypothetical protein SIAM614_17759 [Stappia aggregata IAM 12614]
          Length = 196

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 42/189 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               ++++     R +        +  ++V+     L  V+     +R  V +GR   + 
Sbjct: 32  PAPDLKKVPERYYRKQVDYPTSEKVGTLVVDTSNYYLYLVQENGKAMRYGVGLGRAGFE- 90

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +RI R    P W  P  +IQ+                              E   W
Sbjct: 91  WSGRARIARKAAWPKWTPPEEMIQRQ----------------------------PELEKW 122

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +            PG  N + +  +     +++  Y +H T E     +     +SGCVR
Sbjct: 123 SWRNGGM-----PPGIENPLGARALYIFQGNKDTLYRIHGTAEYWTIGS---AVSSGCVR 174

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 175 LINQDVIDL 183


>gi|21233230|ref|NP_639147.1| hypothetical protein XCC3802 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770172|ref|YP_244934.1| hypothetical protein XC_3874 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115073|gb|AAM43048.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575504|gb|AAY50914.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 453

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
              L        V+ L+E+L   G LD    +   +    E+AV+ FQ  + L    G  
Sbjct: 253 DGVLKRNEQGAPVKELQEKLSKLGYLDAKDAI-GTYGPKTEAAVEKFQQENRLKGVDGKA 311

Query: 158 DSSTLEAMNVPVD 170
              TL +++  V 
Sbjct: 312 GPETLASIDKNVQ 324


>gi|298250948|ref|ZP_06974752.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297548952|gb|EFH82819.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 317

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 8/81 (9%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +   WP         G+S  +V+ ++  L+  G    S  +   F +   S VK FQ  +
Sbjct: 45  AARTWPT-----YQSGSSGENVRSIQYMLVQRGY---SLTVDGQFGSGTASVVKSFQSTN 96

Query: 150 GLDPSGMVDSSTLEAMNVPVD 170
           GL   G+V   T E + V   
Sbjct: 97  GLSVDGIVGPQTWEKLIVTTQ 117



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 18/127 (14%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP 98
           ++   Y   V+ +F +  A V     S                ++    I+    W +L 
Sbjct: 68  LVQRGYSLTVDGQFGSGTASVVKSFQST-------------NGLS-VDGIVGPQTWEKLI 113

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +     G++  +V  L+ +L   G    S     AF    ESAVK FQ   GL   G+  
Sbjct: 114 VTT-QNGSNGSAVTTLQRQLNAHG---ASLTTDGAFAPATESAVKSFQSSKGLSADGIAG 169

Query: 159 SSTLEAM 165
             T   +
Sbjct: 170 LDTWSQL 176


>gi|241203248|ref|YP_002974344.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857138|gb|ACS54805.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 230

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 60/208 (28%), Gaps = 46/208 (22%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            F    G  P      + +  +         Q      R K  L        V+++    
Sbjct: 22  AFAAPAGSAPDNARAPAQIVRVAQMPKYVKPQ----FKRKKVRLATTEAAGTVIIDTNNK 77

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  VE      R  + VGR D        +I R    P W  P  + +++         
Sbjct: 78  YLYLVEGNNRATRYGIGVGR-DGFGWSGVVKIGRKAEWPGWTPPAEMRRRE--------- 127

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNT 321
                                     + +       Q+ G+ N + +  +      R+  
Sbjct: 128 --------------------------AAKGHMIPAFQEGGEDNPLGARAMYLYQGGRDTI 161

Query: 322 Y-MHDTPEPILFNNVVRFETSGCVRVRN 348
           + +H T +P      +   +SGC+R+ N
Sbjct: 162 FRIHGTNQPWTIGLNM---SSGCIRMMN 186


>gi|27381799|ref|NP_773328.1| hypothetical protein bll6688 [Bradyrhizobium japonicum USDA 110]
 gi|27354968|dbj|BAC51953.1| bll6688 [Bradyrhizobium japonicum USDA 110]
          Length = 401

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 60/195 (30%), Gaps = 48/195 (24%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            D    QL  NL R +  L  K     ++V+ P   L  V      +R  V VGR D  T
Sbjct: 199 PDAAPAQLPPNLRRQEVSLATKEPAGTIIVDTPNTYLYYVLGNGRAVRYGVRVGR-DGFT 257

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                +I R    P W  P  +I++                                   
Sbjct: 258 WTGVQKITRKAEWPDWHPPTEMIERQ---------------------------------- 283

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV- 346
                P        G  N + +  +   S    Y +H T +P        F +SGC+ + 
Sbjct: 284 -----PYLPRFMAGGPGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGML 333

Query: 347 -RNIIDLDVWLLKDT 360
             ++ DL   +   T
Sbjct: 334 NEDVSDLFDRVKVGT 348


>gi|227824953|ref|ZP_03989785.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905452|gb|EEH91370.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 242

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               H G S   V  ++E+L++ G           +      A+K +Q   GL+  G++ 
Sbjct: 35  AAAFHQGESGPEVAAIQEKLLMEGY--DIGIPDGVYGERTVDAIKKYQASMGLEVDGIIG 92

Query: 159 SSTL 162
            ST 
Sbjct: 93  DSTY 96


>gi|126462648|ref|YP_001043762.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104312|gb|ABN76990.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 342

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 53/202 (26%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++ V   R             +++N     L  V      +R  + VG+     
Sbjct: 57  PAIPTDRVPVQYQRQTVAYTSNEAPGTIVINPRERVLYFVTGKDTAIRYGIAVGKEG--- 113

Query: 229 PILHSRINRIMFN----PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    ++ N    P W  P  +I  D    L++                       
Sbjct: 114 --FQWSGTAVVANRRHWPTWTPPPEMI--DRKPELKK----------------------- 146

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETS 341
              W           Q  G  N + +  +            +H TPE     +     +S
Sbjct: 147 ---WEKG--------QPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHN---ASS 192

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  ++++DL   +     
Sbjct: 193 GCIRMINQDVVDLFERVPDGAK 214


>gi|282555166|gb|ADA82682.1| L,D-transpeptidase [Candidatus Blochmannia sayi]
          Length = 310

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 55/196 (28%), Gaps = 45/196 (22%)

Query: 196 VLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPYWVIPRSIIQK 253
           +++N     L    +N    +   + +G ++  TP    + I     NP W IP   ++ 
Sbjct: 100 IVINNAEMRLYYYPKNNNTVIVLPIAIGTIENATPSPWRTSIKHKKKNPIW-IPTKNMRD 158

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           + +                                              G  N M S  +
Sbjct: 159 EYIKH----------------------------------GKTLPAIFPAGPNNPMGSYAL 184

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCV--RVRNIIDLDVWLLKDT-PTWSRYHIEE 370
                     H T     F       T GC+  R ++I  L   +   T   +    I+ 
Sbjct: 185 YLGXNYAI--HGTNS--NFGIG-LKVTRGCIKLRPQDIKYLFNIVPVGTIVQFINEPIKS 239

Query: 371 VVKTRKTTPVKLATEV 386
            ++T     +++   +
Sbjct: 240 TIETDGMQYLEIHNPL 255


>gi|92115831|ref|YP_575560.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91798725|gb|ABE61100.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 172

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 54/207 (26%), Gaps = 49/207 (23%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIK---KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           T  A+ +   +    L       +              +LV      L  + +    +R 
Sbjct: 3   TRAAVALAATIGASLLGTASAEARPDEVSYRSDYAPGTILVKTKERRLYLIVDSDRAIRY 62

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V VG+  +Q     + I     +P W  P  + +                         
Sbjct: 63  PVGVGKAGKQ-WAGTAHIEGKYRDPAWAPPAEVKR------------------------- 96

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                         + P        G   N M    +         +H T  P    +  
Sbjct: 97  --------------DNPRIPDVIAGGSPSNPMGVAAMTLSGGGQYAIHGTNRPQTVGH-- 140

Query: 337 RFETSGCVRVRN--IIDLDVWLLKDTP 361
            F + GC+R+ N  I DL   +   TP
Sbjct: 141 -FVSYGCIRMYNNDIDDLYRRVSIGTP 166


>gi|254183943|ref|ZP_04890534.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei 1655]
 gi|184214475|gb|EDU11518.1| putative peptidoglycan binding domain protein [Burkholderia
           pseudomallei 1655]
          Length = 270

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRAPKHLTDADLAR 81


>gi|332558687|ref|ZP_08413009.1| putative lipoprotein [Rhodobacter sphaeroides WS8N]
 gi|332276399|gb|EGJ21714.1| putative lipoprotein [Rhodobacter sphaeroides WS8N]
          Length = 342

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 56/202 (27%), Gaps = 53/202 (26%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++ V   R             +++N     L  V      +R  + VG+     
Sbjct: 57  PAIPTDRVPVQYQRQTVAYTSNEAPGTIVINPRERVLYFVTGKDTAIRYGIAVGKEG--- 113

Query: 229 PILHSRINRIMFN----PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    ++ N    P W  P  +I  D    L++                       
Sbjct: 114 --FQWSGTAVVANRRHWPTWTPPPEMI--DRKPELKK----------------------- 146

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETS 341
              W           Q  G  N + +  +            +H TPE     +     +S
Sbjct: 147 ---WEKG--------QPGGPTNPLGARALYLETNGRDYGYRIHGTPEWNSIGHN---ASS 192

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  ++++DL   +     
Sbjct: 193 GCIRMINQDVVDLFERVPDGAK 214


>gi|315646099|ref|ZP_07899219.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
 gi|315278298|gb|EFU41614.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus vortex V453]
          Length = 146

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 45/183 (24%), Gaps = 61/183 (33%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
           ++++++     L   E GKV     V  G+    TP    +I+  + N  +         
Sbjct: 19  QFIVIDKSTNKLTYYEKGKVIKTFPVATGKKPSYTPEGLFKIHEKVKNRPYYK------- 71

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                                                 +  +          N +    +
Sbjct: 72  -----------------------------------EGIKGGD--------PRNPLGDRWL 88

Query: 314 EFYSR------NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
               +          +H             + ++GC+R+ N      WL       +   
Sbjct: 89  GINVKVNGRISYAYAIHGNNNSNSIGK---YVSAGCIRMHNKD--VRWLYDKVKMNTPVL 143

Query: 368 IEE 370
           I++
Sbjct: 144 IQK 146


>gi|326775778|ref|ZP_08235043.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces cf. griseus XylebKG-1]
 gi|326656111|gb|EGE40957.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces cf. griseus XylebKG-1]
          Length = 519

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 41/129 (31%), Gaps = 16/129 (12%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG-----WPEL 97
                V    +    +      S  P           +A    + + + G      W  L
Sbjct: 391 PQVKAVQTLLNAQGYQAGAADGSFGPTTKGAV-----QAFQRARALEADGTVGPKTWTAL 445

Query: 98  ----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
                   L  G S  +V+RL+  L  +  L  + G   +F    E+AV+ +Q    L  
Sbjct: 446 LSAGTTPALAKGASGDAVKRLQRALTAA--LGTTVGADGSFGPATETAVRTYQTGRKLSV 503

Query: 154 SGMVDSSTL 162
            G V  +T 
Sbjct: 504 DGKVGPATW 512



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  L   G    +     +F    + AV+ FQ    L+  G V   T  A
Sbjct: 387 GSTGPQVKAVQTLLNAQGY--QAGAADGSFGPTTKGAVQAFQRARALEADGTVGPKTWTA 444

Query: 165 M 165
           +
Sbjct: 445 L 445


>gi|255637048|gb|ACU18856.1| unknown [Glycine max]
          Length = 232

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G ++  V  LR  L   G L      +  FD  VESA+K +Q  H L  +G+VD  T++ 
Sbjct: 49  GQNAKGVGELRGYLQKYGYLTKGSSSNDNFDENVESALKHYQAFHHLRDTGVVDDDTIKK 108

Query: 165 MNVP 168
           M++P
Sbjct: 109 MSLP 112


>gi|218288187|ref|ZP_03492486.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241546|gb|EED08719.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 773

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G        S  FD   +  VK FQ   GL   G+V   T
Sbjct: 57  LSYGSTGFYVEVLQNALNALGY--DVGQASGVFDGVTQKEVKAFQQAEGLQTDGIVGPMT 114

Query: 162 LEAMNVPVDLRIRQLQV 178
             A+   V    + + V
Sbjct: 115 WGALAKAVADYRQVMTV 131


>gi|284042364|ref|YP_003392704.1| peptidase M23 [Conexibacter woesei DSM 14684]
 gi|283946585|gb|ADB49329.1| Peptidase M23 [Conexibacter woesei DSM 14684]
          Length = 352

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 2/82 (2%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +  L R G P L  RPL  G +   V  L+  L   G      G   +F    + AV+ F
Sbjct: 90  RRALGRRGRPSLGSRPLRTGLTGWDVAALQFLLHGRGF--GPGGFDGSFGPNTDDAVRRF 147

Query: 146 QMRHGLDPSGMVDSSTLEAMNV 167
           Q    L   G+   +TL A+  
Sbjct: 148 QSAASLGVDGVAGPATLAALRT 169



 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L+  L  +G       +         +AV+  Q R  L   G+   +T  A+  
Sbjct: 44  LQVGLRAAG--TSPGPIDGISGPRTLAAVRRIQARRNLAVDGIAGPATRRALGR 95


>gi|52079751|ref|YP_078542.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52785121|ref|YP_090950.1| hypothetical protein BLi01353 [Bacillus licheniformis ATCC 14580]
 gi|319646441|ref|ZP_08000671.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
 gi|52002962|gb|AAU22904.1| N-acetylmuramoyl-L-alanine amidase [Bacillus licheniformis ATCC
           14580]
 gi|52347623|gb|AAU40257.1| hypothetical protein BLi01353 [Bacillus licheniformis ATCC 14580]
 gi|317392191|gb|EFV72988.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
          Length = 354

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ RL+ +G   P  G   ++      AV   Q + G+   G+   ST
Sbjct: 195 LKKGMSGSHVKKLQTRLVAAGFSLPKYGADGSYGDETVHAVVSLQKKAGIKADGIYGPST 254



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 8/80 (10%)

Query: 93  GWPELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLF 145
            W  LP              +V +++  L            + G+   +     +AVK F
Sbjct: 271 TW-TLPDGIYKVKNPLMKGTAVTQIQTALAALYYYPDKGAKNNGIDGYYGMKTANAVKRF 329

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q+ +GL   G+    T   M
Sbjct: 330 QLMYGLGADGIYGPKTKAKM 349


>gi|544114|sp|Q99125|CWLX_BACLI RecName: Full=Probable N-acetylmuramoyl-L-alanine amidase; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           AltName: Full=ORFL3; Flags: Precursor
 gi|551735|gb|AAA22888.1| ORFL3 [Bacillus licheniformis]
          Length = 354

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V++L+ RL+ +G   P  G   ++      AV   Q + G+   G+   ST
Sbjct: 195 LKKGMSGSHVKKLQTRLVAAGFSLPKYGADGSYGDETVHAVVSLQKKAGIKADGIYGPST 254



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 8/80 (10%)

Query: 93  GWPELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLF 145
            W  LP              +V +++  L            + G+   +     +AVK F
Sbjct: 271 TW-TLPDGIYKVKNPLMKGTAVTQIQTALAALYYYPDKGAKNNGIDGYYGMKTANAVKRF 329

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q+ +GL   G+    T   M
Sbjct: 330 QLMYGLGADGIYGPKTKAKM 349


>gi|328887419|emb|CCA60658.1| putative peptidoglycan binding domain 1 [Streptomyces venezuelae
           ATCC 10712]
          Length = 415

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L E L   G +     +   + A   +AVK +Q  H L  +G V  
Sbjct: 176 RTLKTGDKGKDVRQLEENLAALGYVGFD--VDEEYTAKTAAAVKRWQKSHDLKQTGTVGP 233

Query: 160 STLE 163
             + 
Sbjct: 234 DQIA 237


>gi|147677766|ref|YP_001211981.1| hypothetical protein PTH_1431 [Pelotomaculum thermopropionicum SI]
 gi|146273863|dbj|BAF59612.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 218

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 14/88 (15%)

Query: 278 GKEVFVEEV-DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNV 335
           G+      V +W                   M +  +          +H T  P    + 
Sbjct: 60  GRYESPTPVGNWEVISMET-------NPPAVMGTRWLGLNIPYGNYGIHGTNAPHSIGS- 111

Query: 336 VRFETSGCVRVRN--IIDLDVWLLKDTP 361
             F + GC+R+ N  + +L   +   TP
Sbjct: 112 --FASHGCIRMFNSDVEELFTLVTVGTP 137



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P  P   L  G+    V  ++  L   G L         +    E AVK F+  +GL 
Sbjct: 146 GAPGTPPSVLKYGDKGPDVLEVQRSLKRLGYL--QWTPDGFWGNGTERAVKKFREDNGLK 203

Query: 153 PSGMVDSSTLE 163
            S +VD    +
Sbjct: 204 GSVIVDEQVYK 214


>gi|134299797|ref|YP_001113293.1| cell wall hydrolase SleB [Desulfotomaculum reducens MI-1]
 gi|134052497|gb|ABO50468.1| cell wall hydrolase, SleB [Desulfotomaculum reducens MI-1]
          Length = 224

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  R L LG     VQ+L+  L   G    +      F     ++VK FQ R+GL   G+
Sbjct: 12  LGDRTLKLGIQGYDVQQLQNNLNYLGY--KAGKSDGIFGWQTYNSVKQFQARNGLKVDGV 69

Query: 157 VDSST----LEAMNVPVDLRIRQLQV-NLMRIKKLLEQKMGLRYVLVNI 200
           V  +T    +  ++     R R   V      +  L       Y L  +
Sbjct: 70  VGRATARTMIAQVSGNSGQRPRTASVATATTSRGSLPLSRQDIYDLARV 118


>gi|254421544|ref|ZP_05035262.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196189033|gb|EDX83997.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 146

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-GMVD 158
            PLH G+   +V +L+ RL           ++  FD   + A+  FQ  +G+    G   
Sbjct: 13  EPLHEGDRGPAVAQLQARLAELNAYSSQ--ITGLFDVTTKRALTDFQADYGITEEAGFFG 70

Query: 159 SSTLEAMN 166
             T  A+ 
Sbjct: 71  PQTWYALT 78


>gi|53717805|ref|YP_106791.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           pseudomallei K96243]
 gi|52208219|emb|CAH34150.1| putative phage-encoded peptidoglycan binding protein [Burkholderia
           pseudomallei K96243]
          Length = 270

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G    S  +S  +D   E AV+  Q   GL   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---SLDVSHLYDEQTERAVQTLQATAGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|115523771|ref|YP_780682.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115517718|gb|ABJ05702.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 259

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 61/228 (26%), Gaps = 46/228 (20%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL A     D     +     R       +     V+V+     L  V      +R  V 
Sbjct: 56  TLSAPGAFEDGLAPAVADRFKRSVVSYPTREAPGTVIVDTSNTYLYYVLGQNRAIRYGVG 115

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR    T      ++R    P W  P  +I +                           
Sbjct: 116 VGREG-FTWSGVQTVSRKAEWPDWHPPAEMIARQ-------------------------- 148

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P        G  N + +  +   S     +H T +P        F +
Sbjct: 149 -------------PYLPRFVAGGPGNPLGARAMYLGSSM-YRIHGTNDPSTIGQ---FVS 191

Query: 341 SGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
           SGC+R+ N  + DL   +   T           ++ R       A+ +
Sbjct: 192 SGCIRLTNEDVEDLFSRVNIGTRVVVLPKTAPRLEARTPERAPAASRL 239


>gi|169634237|ref|YP_001707973.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           SDF]
 gi|169153029|emb|CAP02090.1| putative phage-related cell wall hydrolase [Acinetobacter
           baumannii]
          Length = 276

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  L+ +L   G    +     +   F    E AV  FQ + GL   G V 
Sbjct: 3   LKFGSKGTAVVTLQRQLAGMGYKGKTGKVLSIDGIFGESTEYAVIQFQKKVGLVADGKVG 62

Query: 159 SSTLEAMNVPVDLRI 173
             T EA+      ++
Sbjct: 63  DKTREALAGNGLDKL 77


>gi|87302385|ref|ZP_01085210.1| Putative peptidoglycan binding domain 1 [Synechococcus sp. WH 5701]
 gi|87283310|gb|EAQ75266.1| Putative peptidoglycan binding domain 1 [Synechococcus sp. WH 5701]
          Length = 586

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 57/188 (30%), Gaps = 11/188 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+S   V  L+  L  +G       +  +F    E+AV  FQ   GL   G+    
Sbjct: 2   ALRRGDSGDRVSSLQTSLKKAGF--DPGAIDGSFGPGTEAAVIAFQKSEGLFADGIAGVE 59

Query: 161 TLEAMNV---PVDLRIRQLQV-NLMRIKKLLEQKMGLRYVLVNIP---AASLEAVENGKV 213
           TL A+     P D R     + ++  + ++       R +  ++P    A        + 
Sbjct: 60  TLGALEEEILPDDARPDATALFSVELVAQMFSSATPRRNISTHLPHVLEAMRRVSLADRD 119

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII--QKDMMALLRQDPQYLKDNNI 271
            L   +   R + +                   P  +   + D+      D    K    
Sbjct: 120 MLLMALSTIRAETEGFEPIDEFRSRFNTAPGGPPFGLYDNRSDLGNQGPTDGADFKGRGF 179

Query: 272 HMIDEKGK 279
             +  +  
Sbjct: 180 VQLTGRNN 187



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 1/74 (1%)

Query: 101 PLHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G  S  V RL+  L                F    E  V  FQ   G+   G+   
Sbjct: 510 ALTRGMMSTEVGRLQLMLRKALSLTPADLPADSQFGPNTERRVSEFQKAKGIPADGIAGP 569

Query: 160 STLEAMNVPVDLRI 173
           +T++A+      ++
Sbjct: 570 ATIKALEEVTGEKL 583


>gi|262170608|ref|ZP_06038286.1| general secretion pathway protein A [Vibrio mimicus MB-451]
 gi|261891684|gb|EEY37670.1| general secretion pathway protein A [Vibrio mimicus MB-451]
          Length = 529

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 2/109 (1%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++  +      + +           W     R L  G     V  L  +L     L   +
Sbjct: 420 LVGDQRYRIARQWLEPLWRGQYSLLWQGGFSRTLKQGMQGDDVALLESKLSQV--LGEPE 477

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 478 RPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|110636362|ref|YP_676570.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110287346|gb|ABG65405.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 206

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 45/195 (23%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +A      + + ++     R     +       V+V+     L  V  G   +R  + VG
Sbjct: 39  DAGYQLPKIPVSRVPRQYHRQIISYQTDEKPGTVVVDTKDKFLYLVMEGGKAMRYGIGVG 98

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R    +    +R+      P W  P ++I++                             
Sbjct: 99  REG-FSWSGTARVALKREWPTWTPPAAMIKRQ---------------------------- 129

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFE 339
            E   W             PG  N + +  +  +++N      +H TPE       +   
Sbjct: 130 PELAKWAGG--------MPPGLSNPLGARALYLFNKNGDTGYRLHGTPEWWSIGQAM--- 178

Query: 340 TSGCVRV--RNIIDL 352
           +SGC+R+  ++IIDL
Sbjct: 179 SSGCIRLLNQDIIDL 193


>gi|258626901|ref|ZP_05721705.1| General secretion pathway protein A [Vibrio mimicus VM603]
 gi|258580824|gb|EEW05769.1| General secretion pathway protein A [Vibrio mimicus VM603]
          Length = 529

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 2/109 (1%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++  +      + +           W     R L  G     V  L  +L     L   +
Sbjct: 420 LVGDQRYRIARQWLEPLWRGQYSLLWQGGFSRTLKQGMQGDDVALLESKLSQV--LGEPE 477

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 478 RPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|323138693|ref|ZP_08073759.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396048|gb|EFX98583.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 185

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 44/170 (25%), Gaps = 44/170 (25%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               +    ++++     L  V    V +   V V +  +      + I+    NP W  
Sbjct: 45  FATDVEPGAIVISASQRRLFYVVGNGVAISYPVAVPKRGKD-WSGVTSISSKHVNPDWTP 103

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P ++                                         + P        G   
Sbjct: 104 PAAV---------------------------------------KADHPELPDLIPGGAPN 124

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           N M +  +         +H T   +  +      + GC+R+RN  D+   
Sbjct: 125 NPMGTRAMLLDRGE-VAIHGTTNKMRASIGT-AASYGCIRMRN-EDVADL 171


>gi|309811412|ref|ZP_07705199.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
 gi|308434719|gb|EFP58564.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
          Length = 370

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L   +   +V+ L+ RL +         +   +     +AVK FQ  + LD  G+V   
Sbjct: 71  VLTFDSRGEAVKTLQARLAL--------VVDGWYGPVTTAAVKDFQRANRLDVDGVVGPR 122

Query: 161 TLEAMNVPVDLR 172
           T  A++      
Sbjct: 123 TWAALDASSAQP 134



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 16/115 (13%)

Query: 66  DIPIISKETIAQTEKAIAFYQDILSRGGWPEL--------PIRPLHLGNSSVSVQRLRER 117
             P+ +                ++    W  L            +  G+S   V+ ++ +
Sbjct: 96  YGPVTTAAVKDFQRANRLDVDGVVGPRTWAALDASSAQPSAGDVVRRGDSGPLVRAIQSK 155

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L +         +   F    ESAV  FQ  HGL   G+V + T  A+ +  D  
Sbjct: 156 LGV--------NVDGVFGPLTESAVMTFQRSHGLGVDGVVGAKTTYALALATDQP 202


>gi|168178160|ref|ZP_02612824.1| LycA [Clostridium botulinum NCTC 2916]
 gi|21702563|gb|AAM75963.1| LycA [Clostridium botulinum]
 gi|182671439|gb|EDT83413.1| LycA [Clostridium botulinum NCTC 2916]
          Length = 316

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G+   F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGVDGVFGDSTVTAIKAFQRDCHLVADGIVGKETW 308

Query: 163 EAM 165
           +A+
Sbjct: 309 KAL 311


>gi|306843649|ref|ZP_07476250.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. BO1]
 gi|306276340|gb|EFM58040.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. BO1]
          Length = 241

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGRAP 237


>gi|115524091|ref|YP_781002.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115518038|gb|ABJ06022.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 240

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 53/186 (28%), Gaps = 49/186 (26%)

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
            + +L   L R       +     ++++ P   L  V      +R  + VGR D  T   
Sbjct: 75  PVAELPARLKRQVVSYASRETPGTIVIDTPNTYLYFVLGNGRAVRYGIGVGR-DGFTWSG 133

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              I +    P W  P  +I +                                      
Sbjct: 134 TQSITKKAEWPDWTPPPEMIARQ------------------------------------- 156

Query: 292 EPPNFIFRQDPG-KINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNI 349
               ++ RQ  G   N + +  +        Y +H T  P          +SGC+R+ N 
Sbjct: 157 ---PYLPRQMAGGPGNPLGARAMYL--GGTIYRIHGTNAPQTIGTR---VSSGCIRLTN- 207

Query: 350 IDLDVW 355
            D+   
Sbjct: 208 EDVADL 213


>gi|332971678|gb|EGK10626.1| carboxy-terminal processing protease [Desmospora sp. 8437]
          Length = 482

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G  P  P + L    +S  V+ L+  L   G           +    E+AVK FQ    L
Sbjct: 382 GATPPQPDKTLKRDMTSQQVKNLQLILEGLGY--RPDRTDGYYSEQTETAVKAFQRTQKL 439

Query: 152 DPSGMVDSST 161
             +G+VDS T
Sbjct: 440 SVTGVVDSKT 449


>gi|304316200|ref|YP_003851345.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
 gi|302777702|gb|ADL68261.1| NLP/P60 protein [Thermoanaerobacterium thermosaccharolyticum DSM
           571]
          Length = 226

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G    + G+   F +   +AV   Q + GL P G+V  +T
Sbjct: 28  LKYGSRGQAVVSLQQTLNRLGY--NTGGIDGIFGSATRNAVIALQKKFGLSPDGIVGPAT 85

Query: 162 LEAMNVPV 169
              +N  V
Sbjct: 86  EAVLNRTV 93


>gi|238019607|ref|ZP_04600033.1| hypothetical protein VEIDISOL_01476 [Veillonella dispar ATCC 17748]
 gi|237863805|gb|EEP65095.1| hypothetical protein VEIDISOL_01476 [Veillonella dispar ATCC 17748]
          Length = 202

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 32/189 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + +  G     V +++  L   G L  S  +   +    E AV+ FQ   GL   G V 
Sbjct: 24  AKTIDRGQRGHHVSKVQTMLKHQGFLHDS--VDGIYGHNTEQAVRKFQKSKGLAVDGRVG 81

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            ST+ A+    +    +   +      L    +  +Y  V    AS             +
Sbjct: 82  PSTMNAL----EKMETRYGGHGTE---LSHNGVPNKYSRVLTMQASA-----------YS 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
                    T         I+     +IP                 Y++     + D+ G
Sbjct: 124 AQDPGNGNYTATGSRLKKGIVSVDPKLIPL------------GTRLYIEGYGYAVADDVG 171

Query: 279 KEVFVEEVD 287
             +    +D
Sbjct: 172 GAIKGHRID 180


>gi|194015382|ref|ZP_03053998.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
 gi|194012786|gb|EDW22352.1| M15C subfamily peptidase [Bacillus pumilus ATCC 7061]
          Length = 272

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 97  LPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRH 149
           LP   L           V+ ++E L            + G+   +     +AVK FQ+ H
Sbjct: 192 LPSGILKVTKPLTKGAGVKAVQEALAAVYYYPDKGAKNNGIDGYYGPKTANAVKRFQLMH 251

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL   G+    T  A+  
Sbjct: 252 GLVADGIYGPKTKAALEK 269


>gi|119484926|ref|ZP_01619408.1| hypothetical protein L8106_15675 [Lyngbya sp. PCC 8106]
 gi|119457744|gb|EAW38868.1| hypothetical protein L8106_15675 [Lyngbya sp. PCC 8106]
          Length = 135

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V +++  L        +  +   F    E+A+K FQ   GL   G+V   T
Sbjct: 69  LRQGSKGEDVIQIQNNLN--NYSGENLVVDGVFGNATEAAIKKFQAEKGLVVDGIVGRLT 126

Query: 162 LEAMNVP 168
             A+  P
Sbjct: 127 WNALLHP 133



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++ +L I G           F A  E+AVK FQ + GL   G+V   T+  ++    + I
Sbjct: 4   IQAQLNIFG---AKLVEDGIFGATTEAAVKEFQKKSGLTVDGIVGPKTINILSQATSVPI 60

Query: 174 RQL 176
           R L
Sbjct: 61  RTL 63


>gi|116072542|ref|ZP_01469809.1| hypothetical protein BL107_12161 [Synechococcus sp. BL107]
 gi|116065064|gb|EAU70823.1| hypothetical protein BL107_12161 [Synechococcus sp. BL107]
          Length = 164

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 44/173 (25%), Gaps = 69/173 (39%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E+G +     V +G    +TP    ++   + NP WV P S                   
Sbjct: 36  ESGALRQAFPVAIGMPGWETPTGRFKVLEKIDNPVWVHPVS------------------- 76

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN--------- 319
                     +                          N + S  I F+            
Sbjct: 77  --------GDRVADQSSA-------------------NPLGSHWIGFHRDCRGRDAHDGD 109

Query: 320 ---------NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                    +T  H TP         R  + GCVR+   N+  L   +   TP
Sbjct: 110 QWITIKGCTSTGFHGTPHRWTVG---RAVSHGCVRLLNENVSTLYGQVKLGTP 159


>gi|213966259|ref|ZP_03394443.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium amycolatum
           SK46]
 gi|213951111|gb|EEB62509.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium amycolatum
           SK46]
          Length = 394

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 12/74 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL------------DPSKGLSVAFDAYVESAVKLFQMRH 149
           L +G+ S  V  +R  L   G L                G    FD  + +A+  FQ   
Sbjct: 5   LKVGDRSPRVAEVRSTLARLGLLPNWEGSAAEENSPQWSGDDDLFDEDMRNALLAFQQSR 64

Query: 150 GLDPSGMVDSSTLE 163
           G+   G++  STL 
Sbjct: 65  GVYADGIIRDSTLR 78



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 41  NESYHSIV---NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
            E         +D FD  +    +       + +   I      +   ++     G   L
Sbjct: 35  AEENSPQWSGDDDLFDEDMRNALLAFQQSRGVYADGIIRD--STLRLLREASYTLGTRVL 92

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              PL    +   V  L+  L   G       +   F    +++V+ +Q+ +GL+P G+ 
Sbjct: 93  SYDPLSQ-MTGEDVGVLQATLQELGF--HDARVDGHFGPKTDASVREYQLNYGLEPDGIC 149

Query: 158 DSSTLEAMN 166
              TL A++
Sbjct: 150 GPVTLRALS 158


>gi|13471882|ref|NP_103449.1| carnitine operon oxidoreductase [Mesorhizobium loti MAFF303099]
 gi|14022626|dbj|BAB49235.1| probable carnitine operon oxidoreductase [Mesorhizobium loti
           MAFF303099]
          Length = 242

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 6/163 (3%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                ++   N   A      + +V       + +           I+      Y V P 
Sbjct: 54  DPKTRQWTDYNRTKAYQYYKLHKQVPESFRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPG 113

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
               +  + + R    +     +  + E        E+    P+   +      G  N +
Sbjct: 114 QQAIRYGIGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARPWANGMPGGPDNPL 173

Query: 309 ASTKIEFYSRN--NTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            +  +  Y  +    Y +H TPEP          +SGC+R+ N
Sbjct: 174 GARALYLYEGDHDTIYRIHGTPEPWTIG---LDVSSGCIRMNN 213


>gi|310641615|ref|YP_003946373.1| sporulation specific n-acetylmuramoyl-l-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus polymyxa SC2]
 gi|309246565|gb|ADO56132.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus polymyxa SC2]
          Length = 283

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 52/161 (32%), Gaps = 9/161 (5%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++   P      +  G+    V  L+ RL + G       +   F +    AVK FQ  
Sbjct: 44  AAQPVQPTFSSEAVDFGSYGQDVYELQSRLKLLGFF--GGKVDSHFGSSTLKAVKGFQKE 101

Query: 149 HGLDPSGMVDSST-LEAMNVPV--DLRIRQLQVNLM---RIKKLLEQKMGLRYVLVNIPA 202
            G+ P G+V + T L+ +N           +  N     + +         +       A
Sbjct: 102 FGIRPDGVVGAKTKLKLVNATPHWKPTETPMHRNNQGSDQGQAANNNNKSDQNEETMGSA 161

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            ++   EN    + +  + G    +       +  ++ N  
Sbjct: 162 NTMGLSENDLKIM-ANAVYGESRGEPFEGQVAVAAVILNRV 201


>gi|78184905|ref|YP_377340.1| hypothetical protein Syncc9902_1332 [Synechococcus sp. CC9902]
 gi|78169199|gb|ABB26296.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 181

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 43/155 (27%), Gaps = 33/155 (21%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E+G++     V +G    +TP    ++   + NP WV P S     +      +P     
Sbjct: 53  ESGELRQAFPVAIGMPGWETPTGRYKVLEKIDNPVWVHPVS--GDRVADQSSANPLGSHW 110

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
              H                                        I      +T  H TP 
Sbjct: 111 IGFHRDCRGRDAHD--------------------------GDQWITIKGCTSTGFHGTPH 144

Query: 329 PILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                   R  + GCVR+   N+  L   +   TP
Sbjct: 145 RWTVG---RAVSHGCVRLWNENVRTLYGQVKLGTP 176


>gi|226948038|ref|YP_002803129.1| LycA [Clostridium botulinum A2 str. Kyoto]
 gi|40738374|gb|AAR89504.1| LycA [Clostridium botulinum A2 str. Kyoto]
 gi|226842291|gb|ACO84957.1| LycA [Clostridium botulinum A2 str. Kyoto]
          Length = 316

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQRDCHLVADGIVGKETW 308

Query: 163 EAM 165
           +A+
Sbjct: 309 KAL 311


>gi|328910591|gb|AEB62187.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 387

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L              G+  A+ A   +AVK FQ  
Sbjct: 306 SLPAGTFKVTSPLTRGEAVKQIQTALAALHYYPDKSAKNFGIDGAYGAKTANAVKRFQSM 365

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+    T   +  
Sbjct: 366 YGLTADGIYGPKTKAKIEA 384


>gi|254694850|ref|ZP_05156678.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 3 str. Tulya]
 gi|261215181|ref|ZP_05929462.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260916788|gb|EEX83649.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 241

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|186684767|ref|YP_001867963.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467219|gb|ACC83020.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 380

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           ++             L  G+    VQRL+ +L   G    +  +   ++   E AV  FQ
Sbjct: 37  EVAQASSTVTASPAVLRYGSRKSDVQRLQTQLKQLGYY--NGVVDGQYNPSTEIAVAEFQ 94

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
              GL   G+   +T   +   +  + + + 
Sbjct: 95  KAKGLKVDGLAGLATRRRLQAALVAKNQIIT 125


>gi|17232825|ref|NP_489373.1| hypothetical protein alr5333 [Nostoc sp. PCC 7120]
 gi|17134472|dbj|BAB77032.1| alr5333 [Nostoc sp. PCC 7120]
          Length = 130

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ ++  L   G    +  L   +      AV  FQ    L   G V   T
Sbjct: 56  LRPGSRGQAVRDVQAVLQSLGFY--NGALDGIYGLRTARAVAAFQRSQRLVGDGRVGKLT 113

Query: 162 LEAMNVP 168
            +A+   
Sbjct: 114 WQALRNS 120


>gi|300853874|ref|YP_003778858.1| D-glutamyl-meso-diaminopimelate peptidase [Clostridium ljungdahlii
           DSM 13528]
 gi|300433989|gb|ADK13756.1| D-glutamyl-meso-diaminopimelate peptidase [Clostridium ljungdahlii
           DSM 13528]
          Length = 423

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             LG+    V +++  L   G       +   +    E AVK FQ  +GL P G++ S+T
Sbjct: 4   FKLGSRGTQVMKIQAVLRKIGY--NLNTIDGIYGRETEQAVKNFQKNNGLAPDGIIGSNT 61

Query: 162 LEAMN 166
              + 
Sbjct: 62  YRVLR 66


>gi|254473519|ref|ZP_05086915.1| protein ybis [Pseudovibrio sp. JE062]
 gi|211957231|gb|EEA92435.1| protein ybis [Pseudovibrio sp. JE062]
          Length = 235

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 45/182 (24%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R++    +              V+++  +  L  V+      R  V VGR   +      
Sbjct: 86  RRIPKQFLPTTVSYNTSHAPGTVVIDTTSRYLYLVQANGKARRYGVGVGRPGFE-WAGVH 144

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           ++ R    P W  P  ++++                                        
Sbjct: 145 KVTRKREWPDWRPPAEMLKRQ--------------------------------------- 165

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
           PN       G  N + +  +         +H + EP          +SGC+R+RN  D+ 
Sbjct: 166 PNLPRYMPGGPRNPLGARALYLG-STLYRIHGSNEPWTIGQ---AVSSGCIRMRN-EDVA 220

Query: 354 VW 355
             
Sbjct: 221 EL 222


>gi|23500965|ref|NP_697092.1| putative lipoprotein [Brucella suis 1330]
 gi|62289036|ref|YP_220829.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
 gi|82698973|ref|YP_413547.1| hypothetical protein BAB1_0047 [Brucella melitensis biovar Abortus
           2308]
 gi|148559068|ref|YP_001258095.1| putative lipoprotein [Brucella ovis ATCC 25840]
 gi|161618039|ref|YP_001591926.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163842326|ref|YP_001626730.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189023311|ref|YP_001934079.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|225626596|ref|ZP_03784635.1| lipoprotein [Brucella ceti str. Cudo]
 gi|237814524|ref|ZP_04593522.1| lipoprotein [Brucella abortus str. 2308 A]
 gi|254690361|ref|ZP_05153615.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 6 str. 870]
 gi|254696479|ref|ZP_05158307.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700864|ref|ZP_05162692.1| ErfK/YbiS/YcfS/YnhG [Brucella suis bv. 5 str. 513]
 gi|254705231|ref|ZP_05167059.1| ErfK/YbiS/YcfS/YnhG [Brucella suis bv. 3 str. 686]
 gi|254707249|ref|ZP_05169077.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis M163/99/10]
 gi|254709207|ref|ZP_05171018.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis B2/94]
 gi|254731391|ref|ZP_05189969.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 4 str. 292]
 gi|256030731|ref|ZP_05444345.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis M292/94/1]
 gi|256045839|ref|ZP_05448715.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060192|ref|ZP_05450372.1| ErfK/YbiS/YcfS/YnhG [Brucella neotomae 5K33]
 gi|256112556|ref|ZP_05453477.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 3 str. Ether]
 gi|256158739|ref|ZP_05456614.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M490/95/1]
 gi|256254136|ref|ZP_05459672.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti B1/94]
 gi|256258615|ref|ZP_05464151.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 9 str. C68]
 gi|256368516|ref|YP_003106022.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260169635|ref|ZP_05756446.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. F5/99]
 gi|260546330|ref|ZP_05822070.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260563130|ref|ZP_05833616.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260567303|ref|ZP_05837773.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260755906|ref|ZP_05868254.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260759130|ref|ZP_05871478.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260760855|ref|ZP_05873198.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884929|ref|ZP_05896543.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261221280|ref|ZP_05935561.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261314732|ref|ZP_05953929.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316710|ref|ZP_05955907.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261324169|ref|ZP_05963366.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261751375|ref|ZP_05995084.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261755940|ref|ZP_05999649.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261759166|ref|ZP_06002875.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|265987780|ref|ZP_06100337.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265992254|ref|ZP_06104811.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993997|ref|ZP_06106554.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265997241|ref|ZP_06109798.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|297247455|ref|ZP_06931173.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
 gi|23346823|gb|AAN29007.1| lipoprotein, putative [Brucella suis 1330]
 gi|62195168|gb|AAX73468.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
 gi|82615074|emb|CAJ10003.1| ErfK/YbiS/YcfS/YnhG:Twin-arginine translocation pathway signal
           [Brucella melitensis biovar Abortus 2308]
 gi|148370325|gb|ABQ60304.1| putative lipoprotein [Brucella ovis ATCC 25840]
 gi|161334850|gb|ABX61155.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163673049|gb|ABY37160.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189018883|gb|ACD71605.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|225618253|gb|EEH15296.1| lipoprotein [Brucella ceti str. Cudo]
 gi|237789361|gb|EEP63571.1| lipoprotein [Brucella abortus str. 2308 A]
 gi|255998674|gb|ACU47073.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260096437|gb|EEW80313.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260153146|gb|EEW88238.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260156821|gb|EEW91901.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260669448|gb|EEX56388.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260671287|gb|EEX58108.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676014|gb|EEX62835.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260874457|gb|EEX81526.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260919864|gb|EEX86517.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261295933|gb|EEX99429.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261300149|gb|EEY03646.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261303758|gb|EEY07255.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261739150|gb|EEY27146.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|261741128|gb|EEY29054.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261745693|gb|EEY33619.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|262551709|gb|EEZ07699.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|262764978|gb|EEZ10899.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003320|gb|EEZ15613.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|264659977|gb|EEZ30238.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|297174624|gb|EFH33971.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
          Length = 241

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|114567038|ref|YP_754192.1| hypothetical protein Swol_1518 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337973|gb|ABI68821.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 241

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPS 154
            L  R L  G+    V+ L+  L I  D   S       F    E+AVK FQ    L   
Sbjct: 6   TLGSRVLRRGDEGTDVELLQNLLKILPDPIGSGIKEKGVFGKETENAVKKFQKYFNLAID 65

Query: 155 GMVDSSTLEAMNVPVDLRI 173
           G+V ++T   + VP    I
Sbjct: 66  GIVGANTFLFLGVPTASYI 84



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 1   MVGYLKINKILYCFFVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVD 60
           + G   + K  Y + V+++             A    + + +  +   + + ++ +    
Sbjct: 90  LFGARILQKGSYGYDVWVL------QNRLATTAKKFADTLGQPANRNFDSKTESAVKMFQ 143

Query: 61  MGIDSDIP-IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLI 119
             +  +   I+  +T+ Q          IL +G W           N    V  L+  L 
Sbjct: 144 RDVHLEGDGIVGPQTVYQLYNYATMGARILQKGRWDR---------NQGYDVYWLQRNLQ 194

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G       L   F +  E+AVK  Q   G+   G+V ++T 
Sbjct: 195 ELGYY--QGKLDGKFGSQTEAAVKKLQEASGIKVDGIVGANTF 235



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 43/115 (37%), Gaps = 9/115 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSG 155
            R L  G+    V  L+ RL  +            +  FD+  ESAVK+FQ    L+  G
Sbjct: 93  ARILQKGSYGYDVWVLQNRLATTAKKFADTLGQPANRNFDSKTESAVKMFQRDVHLEGDG 152

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +V   T+  +     +  R L     + +    Q   + ++  N+    L   + 
Sbjct: 153 IVGPQTVYQLYNYATMGARIL----QKGRWDRNQGYDVYWLQRNL--QELGYYQG 201


>gi|306842658|ref|ZP_07475303.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. BO2]
 gi|306287193|gb|EFM58690.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. BO2]
          Length = 241

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 80  PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 139 WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 163

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 164 -KPELEKYRNGQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 220 LMNQDIIDLYNRVQGKAP 237


>gi|282866653|ref|ZP_06275695.1| Peptidase M15A [Streptomyces sp. ACTE]
 gi|282558555|gb|EFB64115.1| Peptidase M15A [Streptomyces sp. ACTE]
          Length = 245

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V +L+ R  ++G    +    +  ++     +AVK FQ  +GL   G+
Sbjct: 39  TRTLSSGATGNDVTQLQIR--VAGYPGYNSVLAVDGSYGPATTAAVKRFQAAYGLAADGV 96

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 97  AGPATQAKL 105


>gi|295100343|emb|CBK97888.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 159

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A Y      G     P   L  G++   V+ ++++L   G           F     +AV
Sbjct: 78  ARYT--AKHGLIVPYPGIVLRSGSAGGCVRLVQQKLNTDG---ERLTTDGRFGTSTVAAV 132

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           K +Q RH L   G V   T E M
Sbjct: 133 KRYQTRHSLTSDGSVGKDTWEKM 155



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +  G+S   V  ++  L    D      +  +   F A  E AV+ FQ+R+GL   G V 
Sbjct: 10  IRRGSSGPDVALVQTWLNGIRDSCTWYAALTVDGTFGANAEKAVREFQLRYGLKEDGKVG 69

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 70  ANTWNVL 76


>gi|302558624|ref|ZP_07310966.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
 gi|302476242|gb|EFL39335.1| peptidoglycan binding domain-containing protein [Streptomyces
           griseoflavus Tu4000]
          Length = 223

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 8/77 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGW  +       G     V  ++  +   G           +      AVK F
Sbjct: 86  RGVDLGGGWSRID-----PGARGRRVAAIQYLMTQRGY---GLTADGYYGPVSAGAVKRF 137

Query: 146 QMRHGLDPSGMVDSSTL 162
           Q   GL   G V  +T 
Sbjct: 138 QAARGLVADGQVGPATW 154



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 22/150 (14%)

Query: 23  GLSLVEK--PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           G+ L      I        +    + +    +        +  D     +S   + + + 
Sbjct: 87  GVDLGGGWSRIDPGARGRRVAAIQYLMTQRGY-------GLTADGYYGPVSAGAVKRFQA 139

Query: 81  AIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           A    + +++ G      WP L    L  G++   V+ L+  L   G           F 
Sbjct: 140 A----RGLVADGQVGPATWPHLVY-TLRQGHAGHHVRALQTVLDKHG---AGLVADGGFG 191

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   SAV+ +Q  + L   G+  + T  A+
Sbjct: 192 SVTASAVRAYQSVNRLVVDGVAGAVTWRAL 221


>gi|291550822|emb|CBL27084.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus torques L2-14]
          Length = 430

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+    V++++E L +I+G     P       +    E+AV+ FQ   GL  +
Sbjct: 346 PGYTLEQGSQGPKVRQIQEELNVIAGAYPEIPKLTEDGIYGPETEAAVRKFQSIFGLPVT 405

Query: 155 GMVDSSTLEAMN 166
           G +D  T   ++
Sbjct: 406 GEIDYKTWYKIS 417


>gi|87303205|ref|ZP_01086003.1| putative bacteriophage lysozyme [Synechococcus sp. WH 5701]
 gi|87282372|gb|EAQ74332.1| putative bacteriophage lysozyme [Synechococcus sp. WH 5701]
          Length = 171

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             +A   +  A  + +   G  P      L +G    SV +L+  L + G    S  +  
Sbjct: 78  RVLAGLVRRRAEERAMFISGIQPVNDQAFLVVGEKGESVVKLQTSLNLHG---ESIQIDG 134

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            F  + E AVK FQ + GL   G+V   T E + 
Sbjct: 135 IFGPHTEDAVKRFQAKSGLVSDGIVGPRTWEKLE 168


>gi|209886166|ref|YP_002290023.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209874362|gb|ACI94158.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 387

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 65/221 (29%), Gaps = 55/221 (24%)

Query: 150 GLDPSGMVD----SSTLEAMNVPVDLRIRQ---LQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           G+   G +        + A+ V     +     L   L R +   + K     ++V+   
Sbjct: 143 GMPQQGRIGANGQPVQIAALPVEDQPEVGPRPELPARLRRQEVNFKTKEPAGTIVVDTAN 202

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  +      +R  V VGR D  T     +I R    P W  P  +I++         
Sbjct: 203 TQLYYILGNGRAVRYGVRVGR-DGFTWAGVQKITRKAEWPDWHPPPEMIERQ-------- 253

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
                                          P        G  N + +  +   +    Y
Sbjct: 254 -------------------------------PYLPRFMAGGDGNPLGARAMYLGN--TVY 280

Query: 323 -MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            +H T +P        F +SGC+ +   ++ DL   +   T
Sbjct: 281 RIHGTNQPSTIGK---FVSSGCIGMLNEDVEDLFERVKVGT 318


>gi|150388378|ref|YP_001318427.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149948240|gb|ABR46768.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 320

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V+RL+  L  +G       +   F    + AV  FQ    +   G+V   T
Sbjct: 130 LRVGSRGPDVERLQRLLRDNGY--DPGPIDGIFGTRTQLAVIAFQRDLNIVADGIVGPRT 187

Query: 162 LEAMNVP 168
              + V 
Sbjct: 188 WTGLGVD 194


>gi|299538548|ref|ZP_07051831.1| spore cortex-lytic enzyme precursor [Lysinibacillus fusiformis ZC1]
 gi|298726135|gb|EFI66727.1| spore cortex-lytic enzyme precursor [Lysinibacillus fusiformis ZC1]
          Length = 271

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G       +   F      A++ FQ  +GL   G
Sbjct: 26  AFSDQQITRGAYGDDVVELQARLQYLGFYKS--KIDGKFGYNTYWALRNFQENYGLPVDG 83

Query: 156 MVDSSTLEAMNVPVD 170
           +  + T +A+    D
Sbjct: 84  IAGAKTKKALTGNSD 98


>gi|323136681|ref|ZP_08071762.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397998|gb|EFY00519.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 201

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 8/129 (6%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV-- 286
           P+    ++      Y+V+P     +  +A  +    +     +  + E  + +  +++  
Sbjct: 61  PVGSIVVDSRHHFLYYVMPGGKAVRYGVATGQDAMGWTGRAYVGAMQEWPRWIPPKDMLE 120

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGC 343
            W   +P         G  N + S  +  Y   ++  Y +H T EP          +SGC
Sbjct: 121 RWPHLQPTADAGGLPGGPDNPLGSRALYLYQDGKDTLYRIHGTNEPEKIGQG---VSSGC 177

Query: 344 VRVRNIIDL 352
           +R+R+I  +
Sbjct: 178 IRMRDIDAI 186


>gi|153824309|ref|ZP_01976976.1| general secretion pathway protein A [Vibrio cholerae B33]
 gi|126518168|gb|EAZ75393.1| general secretion pathway protein A [Vibrio cholerae B33]
          Length = 259

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 2/105 (1%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           E      + +    +      W     R L  G     V  L  +L     L   +    
Sbjct: 154 ERYRIARQWLEPLWNGQFSLLWQASFSRTLKQGMQGADVALLESKLAQV--LGEPERPRE 211

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
            FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 212 QFDKDLSRKVELFQRWQNMHVDGIAGRQTLRRLELLTQQQAPSLK 256


>gi|239982441|ref|ZP_04704965.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces albus
           J1074]
 gi|291454288|ref|ZP_06593678.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
 gi|729061|sp|P00733|CBPM_STRAL RecName: Full=Zinc D-Ala-D-Ala carboxypeptidase; AltName:
           Full=D-alanyl-D-alanine carboxypeptidase; AltName:
           Full=Metallo DD-peptidase; AltName: Full=Zn
           DD-peptidase; Flags: Precursor
 gi|288967|emb|CAA39319.1| metallo (Zn) DD-peptidase [Streptomyces albus]
 gi|291357237|gb|EFE84139.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces albus J1074]
 gi|228101|prf||1717223A DD peptidase
          Length = 255

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +   F    ++AV+ FQ  +GL   G+
Sbjct: 49  SGTLSEGSSGEAVRQLQIR--VAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGI 106

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 107 AGPATFNKI 115


>gi|157831772|pdb|1LBU|A Chain A, Hydrolase Metallo (Zn) Dd-Peptidase
          Length = 213

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +   F    ++AV+ FQ  +GL   G+
Sbjct: 7   SGTLSEGSSGEAVRQLQIR--VAGYPGTGAQLAIDGQFGPATKAAVQRFQSAYGLAADGI 64

Query: 157 VDSSTLEAM 165
              +T   +
Sbjct: 65  AGPATFNKI 73


>gi|282897905|ref|ZP_06305900.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281197049|gb|EFA71950.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 201

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 5/71 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P++P   L  G+S ++++ L+  LI +G    +  +   F    E+A+K FQ +  L   
Sbjct: 133 PQMP--TLRFGDSGLAIRVLQRLLISNGY---NVRVDGVFGPLTETAIKAFQSQRDLSVD 187

Query: 155 GMVDSSTLEAM 165
           G+V  +T   +
Sbjct: 188 GIVGPNTWYQL 198


>gi|182677449|ref|YP_001831595.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633332|gb|ACB94106.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 258

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 39/197 (19%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              ++ ++    +R +   +    +  ++++     L  VE G   +R  V VGR     
Sbjct: 80  PGTKLSEIDPAFLRKEVDYKTNEPVGTIVIDPQHHYLYHVEEGGKAMRYGVGVGREGFA- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + IN     P W  P+ ++Q+     L++    L+                     
Sbjct: 139 WSGEATINFKREWPDWYPPKEMLQRQ--PELKKKMAQLQSG------------------- 177

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N +    +  +  + +  + +H T EP          +SGC+R
Sbjct: 178 ---------LGMAGGPGNPLGVRAMYLWQGNVDTLFRIHGTVEPWSIGKS---VSSGCIR 225

Query: 346 V--RNIIDLDVWLLKDT 360
           +  ++++DL   +   T
Sbjct: 226 MVNQDVVDLYQRVPVGT 242


>gi|78049967|ref|YP_366142.1| hypothetical protein XCV4411 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038397|emb|CAJ26142.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 615

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 11/147 (7%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMG----IDSDIPIISKETIAQTEKAIAFYQD 87
             +  D     +      D +    A +D         +    S+ T    +KA+   + 
Sbjct: 235 THTYYDGPKAANVAQNYEDAYPQNQAALDRAHLKVSGRNFDPSSERTDPDVQKAL---EL 291

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKL 144
           + +  G        L  G+S   V++L   L   G  D       +   F+A  + AV+ 
Sbjct: 292 VNASPGRQAAQSHILKEGSSGREVRKLESNLSALGYGDSDGHALQIDQKFNASTKQAVEA 351

Query: 145 FQMRHGL-DPSGMVDSSTLEAMNVPVD 170
           FQ  +GL    G    +TL+A+     
Sbjct: 352 FQWANGLTPVDGKAGPATLDAIGRQAR 378



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 57/190 (30%), Gaps = 42/190 (22%)

Query: 47  IVNDRFDNFLARVDMG---IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH 103
            ++ +F+    +        +   P+  K   A  +      + +             + 
Sbjct: 336 QIDQKFNASTKQAVEAFQWANGLTPVDGKAGPATLDAIGRQARGLQ---------SDLIE 386

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG +    + LR    + G L           +    AV  FQ  +GL  +G+ D  TL+
Sbjct: 387 LGFTGADSKPLR----VDGYL----------GSGTRQAVSAFQEANGLPVTGIADRGTLD 432

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           ++         Q+Q N            G R+                    RS  ++ R
Sbjct: 433 SL---ARQTAEQIQTNDPEQA--PGTYRGHRHTGTMEA-----------PSPRSDEVLAR 476

Query: 224 VDRQTPILHS 233
                P+L S
Sbjct: 477 PANTPPLLSS 486


>gi|327440243|dbj|BAK16608.1| uncharacterized protein [Solibacillus silvestris StLB046]
          Length = 111

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 10/75 (13%), Positives = 18/75 (24%), Gaps = 10/75 (13%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
           GK +        +                      +     +   +H T  P        
Sbjct: 31  GKILTPTPSGTYTIINKQL------NPPAPFGVLWMGLSKPH-YGIHGTNNPASIGKNR- 82

Query: 338 FETSGCVRVRNIIDL 352
             + GC+R+ N   L
Sbjct: 83  --SHGCIRMFNHDVL 95


>gi|324326719|gb|ADY21979.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 253

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGNSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|226311843|ref|YP_002771737.1| spore cortex-lytic enzyme precursor [Brevibacillus brevis NBRC
           100599]
 gi|226094791|dbj|BAH43233.1| probable spore cortex-lytic enzyme precursor [Brevibacillus brevis
           NBRC 100599]
          Length = 261

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 56/203 (27%), Gaps = 12/203 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST- 161
            +G     V+ ++ RL   G    +  +   F      A++ FQ   GL   G++ + T 
Sbjct: 38  KVGEEGSDVREMQYRLKHLGFY--TGKVDGVFGWRSYWALRNFQYEFGLPIDGVLGAQTK 95

Query: 162 --LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             L             L V                    + P   +  +    + L +  
Sbjct: 96  VKLYNATKNYKPTASDLGVPQTATPAPSTPSTPSTPSAPSKPTYHVAGISENDLRLMANA 155

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVI--PRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
           + G    +  I    +  ++ N       P +                + D  I +   +
Sbjct: 156 VYGESRGEPYIGQVAVAAVILNRTKNASFPNTPAGVIFEPRA---FTAVADGQIWLTPNE 212

Query: 278 --GKEVFVEEVDWNSPEPPNFIF 298
              K V      W+  +   + F
Sbjct: 213 QAKKAVNDALKGWDPTDGAIYYF 235


>gi|23097729|ref|NP_691195.1| cell wall associated protein [Oceanobacillus iheyensis HTE831]
 gi|22775953|dbj|BAC12230.1| cell wall associated protein (cell wall lytic activity)
           [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +  G+ S +V+ L+E L   G    +  +   F    E AV+ +Q    L   G+V  
Sbjct: 65  GLIQRGDVSSAVEDLQEELQDQGYYTYN--IDGIFGPITEEAVREYQADQDLQVDGIVGP 122

Query: 160 STLEAMNVPVDLRIRQLQV 178
           +T +A+ V  +    +L +
Sbjct: 123 NTKDALAVQNENSDEELNI 141


>gi|30262721|ref|NP_845098.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Ames]
 gi|47528039|ref|YP_019388.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49185569|ref|YP_028821.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Sterne]
 gi|49479156|ref|YP_036844.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|65320051|ref|ZP_00393010.1| COG3773: Cell wall hydrolyses involved in spore germination
           [Bacillus anthracis str. A2012]
 gi|165868424|ref|ZP_02213084.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0488]
 gi|167631745|ref|ZP_02390072.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0442]
 gi|167637623|ref|ZP_02395902.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0193]
 gi|170685440|ref|ZP_02876664.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0465]
 gi|170704742|ref|ZP_02895208.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0389]
 gi|177649478|ref|ZP_02932480.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0174]
 gi|190565234|ref|ZP_03018154.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis
           Tsiankovskii-I]
 gi|227814439|ref|YP_002814448.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CDC
           684]
 gi|228915357|ref|ZP_04078950.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229601515|ref|YP_002867030.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0248]
 gi|254685313|ref|ZP_05149173.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           CNEVA-9066]
 gi|254722722|ref|ZP_05184510.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A1055]
 gi|254737769|ref|ZP_05195472.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Western North America USA6153]
 gi|254743057|ref|ZP_05200742.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Kruger B]
 gi|254752083|ref|ZP_05204120.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Vollum]
 gi|254760604|ref|ZP_05212628.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Australia 94]
 gi|301054274|ref|YP_003792485.1| spore cortex-lytic enzyme [Bacillus anthracis CI]
 gi|30257353|gb|AAP26584.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. Ames]
 gi|47503187|gb|AAT31863.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49179496|gb|AAT54872.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           Sterne]
 gi|49330712|gb|AAT61358.1| spore cortex-lytic enzyme [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|164715150|gb|EDR20667.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0488]
 gi|167514172|gb|EDR89539.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0193]
 gi|167532043|gb|EDR94679.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0442]
 gi|170130543|gb|EDS99404.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0389]
 gi|170670800|gb|EDT21539.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0465]
 gi|172084552|gb|EDT69610.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0174]
 gi|190563261|gb|EDV17226.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis
           Tsiankovskii-I]
 gi|227002927|gb|ACP12670.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str. CDC
           684]
 gi|228844300|gb|EEM89358.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229265923|gb|ACQ47560.1| spore cortex-lytic enzyme prepeptide [Bacillus anthracis str.
           A0248]
 gi|300376443|gb|ADK05347.1| spore cortex-lytic enzyme [Bacillus cereus biovar anthracis str.
           CI]
          Length = 253

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGNSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|297516700|ref|ZP_06935086.1| hypothetical protein EcolOP_03614 [Escherichia coli OP50]
          Length = 207

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 45/169 (26%), Gaps = 44/169 (26%)

Query: 202 AASLEAVE-NGKVGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
              L     +        + +G+  R+TP    + + R    P W    +  ++      
Sbjct: 1   EMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRRE------ 54

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
                                         +    +       G  N M    I      
Sbjct: 55  -----------------------------YAKRGESLPAFVPAGPDNPMGLYAIYIGRLY 85

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
               H T     F   +R  + GC+R+RN  D   +L  + P  +R  I
Sbjct: 86  AI--HGTNAN--FGIGLR-VSQGCIRLRN--DDIKYLFDNVPVGTRVQI 127


>gi|119898071|ref|YP_933284.1| hypothetical protein azo1780 [Azoarcus sp. BH72]
 gi|119670484|emb|CAL94397.1| hypothetical protein azo1780 [Azoarcus sp. BH72]
          Length = 208

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKG-----LSVAFDAYVESAVKLFQMRHGLDPSG 155
            L LG++   V+ L++RL+ +  L P        +   F    + AV  +Q  HGL P G
Sbjct: 4   VLKLGSTGDLVRLLQQRLVEAEALPPEDVQGHSNIDGQFGRITQDAVIGYQTAHGLTPDG 63

Query: 156 MVDSST 161
           +V   T
Sbjct: 64  LVGHRT 69


>gi|229916617|ref|YP_002885263.1| carboxyl-terminal protease [Exiguobacterium sp. AT1b]
 gi|229468046|gb|ACQ69818.1| carboxyl-terminal protease [Exiguobacterium sp. AT1b]
          Length = 467

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G+   +V  L + L   G      G    +   + +AVK FQ  +GL+ SG VD 
Sbjct: 378 ESLQVGDYGDAVSNLHKILTGIGY--EPGGQPGYYGDTMANAVKAFQTDNGLEASGTVDE 435

Query: 160 STLEAMNV 167
            T  A+  
Sbjct: 436 ETASALEA 443


>gi|218530732|ref|YP_002421548.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254561701|ref|YP_003068796.1| hypothetical protein METDI3291 [Methylobacterium extorquens DM4]
 gi|218523035|gb|ACK83620.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|254268979|emb|CAX24940.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 223

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 46/167 (27%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       +     ++V+     L  V  G   +R  V VGR    T    ++I      
Sbjct: 82  REVVEYNSRYAPGTIVVSTAERRLYYVMPGGQAVRYGVGVGRPG-FTWSGVNKITAKREW 140

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P ++I +                                        P+      
Sbjct: 141 PGWTPPAAMIARR---------------------------------------PDLPRYMA 161

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 162 GGIENPLGARAMYIGKSE-YRIHGSNEPDTIGQ---AVSSGCIRMTN 204


>gi|254718356|ref|ZP_05180167.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. 83/13]
 gi|265983317|ref|ZP_06096052.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306839587|ref|ZP_07472391.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|264661909|gb|EEZ32170.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|306405285|gb|EFM61560.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
          Length = 206

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|237786645|ref|YP_002907350.1| cell wall hydrolase [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759557|gb|ACR18807.1| cell wall hydrolase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 392

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V +L+  L   G       +   F     SA+K +Q  +GL   G+    T++A+
Sbjct: 98  MQGDDVAQLQSHLQELGFYSSQ--IDGQFSRDTYSALKNYQRDYGLTVDGVCGPDTMKAL 155

Query: 166 N 166
           +
Sbjct: 156 S 156



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDL----------DPSKGLSVAFDAYVESAVKLFQMRH 149
             L +G+ S  V  +R  L   G L          D        FD  ++SA++ FQ + 
Sbjct: 3   ENLQVGDKSPRVAEVRTILTKVGLLKHPVSEHTSTDQWADGDDDFDYELQSALRAFQQQR 62

Query: 150 GLDPSGMVDSSTLE 163
           G+   G+++  TL 
Sbjct: 63  GVLADGVINDHTLR 76


>gi|17228662|ref|NP_485210.1| lysin [Nostoc sp. PCC 7120]
 gi|17130513|dbj|BAB73124.1| lysin [Nostoc sp. PCC 7120]
          Length = 242

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+    V  L+E LI          +   F    E+AVK FQ R  + P G+V+
Sbjct: 4   TETLRKGSKGSDVSELQEILIKLKF--DPGRIDGDFGNKTEAAVKQFQQRQSITPDGVVE 61

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
            +T  A+N  +  +I   ++
Sbjct: 62  INTRNALNKAIQRQIEIAKL 81


>gi|332798862|ref|YP_004460361.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
 gi|332696597|gb|AEE91054.1| ErfK/YbiS/YcfS/YnhG family protein [Tepidanaerobacter sp. Re1]
          Length = 176

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWS 364
             S  +        Y +H T +P        FE+SGC+R+ N  +  +  W+   T  + 
Sbjct: 38  FGSRWMRLSVPWGIYGIHGTNKPWSIGT---FESSGCIRMYNTHVEQVYEWVTIGTKVFM 94

Query: 365 RYHIE 369
              ++
Sbjct: 95  VGGVD 99



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  +++RL   G    +      ++   + AV  FQ   GL PSG VD++
Sbjct: 108 TLSQGSRGSDVLEVQKRLAGYGFY--NGAYDGIYEHETQKAVLAFQKAKGLYPSGKVDAA 165

Query: 161 TLEAMNVP 168
           T + + + 
Sbjct: 166 TYKELGIS 173


>gi|239927067|ref|ZP_04684020.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           ghanaensis ATCC 14672]
 gi|291435412|ref|ZP_06574802.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338307|gb|EFE65263.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 227

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L  G+    V  L+ RL+   D+         +DA + +AV  FQ+ +G+     G+   
Sbjct: 144 LREGDFGPEVTELQRRLLRIPDVYREGTTDGRYDAALSAAVARFQLWYGVRGDETGVYGD 203

Query: 160 STLEAMN 166
            T  A+ 
Sbjct: 204 DTRLALE 210


>gi|163851980|ref|YP_001640023.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163663585|gb|ABY30952.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 223

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 45/162 (27%), Gaps = 44/162 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              +     ++V+     L  V  G   +R  V VGR    T    ++I      P W  
Sbjct: 87  YNSRYAPGTIVVSTAERRLYYVMPGGQAVRYGVGVGRPG-FTWSGVNKITAKREWPGWTP 145

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P ++I +                                        P+       G  N
Sbjct: 146 PAAMIARR---------------------------------------PDLPRYMAGGIEN 166

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  +         +H + EP          +SGC+R+ N
Sbjct: 167 PLGARAMYIGKSE-YRIHGSNEPDTIGQ---AVSSGCIRMTN 204


>gi|138896847|ref|YP_001127300.1| hypothetical protein GTNG_3210 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250423|ref|ZP_03149115.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
 gi|134268360|gb|ABO68555.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210082|gb|EDY04849.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
          Length = 165

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 36/101 (35%), Gaps = 11/101 (10%)

Query: 268 DNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTY 322
                ++ ++G+ +    V       +    +F+   + P       +  +     +   
Sbjct: 64  SRRQLILKDRGRTIRTYPVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIH-YG 122

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +H T +P        + + GC+R+ N  +++L   +   T 
Sbjct: 123 IHGTNDPSSIGK---YVSRGCIRMHNKDVLELASIVPNGTE 160


>gi|110632721|ref|YP_672929.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110283705|gb|ABG61764.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 266

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 40/162 (24%), Gaps = 40/162 (24%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            +       ++V+     L  V       R  V VG+ D        ++      P W  
Sbjct: 126 YDGPQAPGTIVVDTKERFLYLVLKDGQARRYGVGVGK-DGFGWTGTHKVTAKREWPDWRP 184

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P  +I ++                                                G  N
Sbjct: 185 PAEMIARE-----------------------------------RKNGKILPTLVKGGPQN 209

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  +         +H T  P          +SGC+R+RN
Sbjct: 210 PLGARALYLG-STLYRIHGTNAPWTIGQ---AVSSGCIRMRN 247


>gi|169834766|ref|YP_001715696.1| LycA [Clostridium botulinum A3 str. Loch Maree]
 gi|169408873|gb|ACA57283.1| LycA [Clostridium botulinum A3 str. Loch Maree]
          Length = 316

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGERGGITKVIQQMLINIGYPVGSHGADGVFGDDTVTAIKAFQRDCHLVVDGIVGKETW 308

Query: 163 EAM 165
           EA+
Sbjct: 309 EAL 311


>gi|168184756|ref|ZP_02619420.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum Bf]
 gi|182672158|gb|EDT84119.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum Bf]
          Length = 316

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 249 KQGERGGITKVIQQMLINIGYPVGSHGADGVFGDDTVTAIKAFQRDCHLVVDGIVGKETW 308

Query: 163 EAM 165
           EA+
Sbjct: 309 EAL 311


>gi|119383274|ref|YP_914330.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
 gi|119373041|gb|ABL68634.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
          Length = 192

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 301 DPGKINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
             G  N + +  +       +  +  +H T EP       R  ++GC+R+RN  ++DL  
Sbjct: 125 PGGPTNPLGARALYLYDAKGNDTSIRIHGTTEPNSIG---RAVSNGCIRMRNEAVMDLFE 181

Query: 355 WLLKDTPTW 363
            +   TP +
Sbjct: 182 QVPIGTPVY 190


>gi|330466869|ref|YP_004404612.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
           maris AB-18-032]
 gi|328809840|gb|AEB44012.1| putative muramoyl-pentapeptide carboxypeptidase [Verrucosispora
           maris AB-18-032]
          Length = 249

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G +   V++L+ R  +SG         L  A+     SAV  FQ  +GL   G+
Sbjct: 44  GRTLSSGMTGEDVRQLQIR--VSGYPGYGAVLTLDGAYGPATRSAVIRFQQAYGLAADGV 101

Query: 157 VDSSTLEAM 165
             + T   +
Sbjct: 102 AGAQTFNQI 110


>gi|294498738|ref|YP_003562438.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium QM B1551]
 gi|294348675|gb|ADE69004.1| L-alanyl-D-glutamate peptidase [Bacillus megaterium QM B1551]
          Length = 231

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G     VQ ++  LI  G    S G    F +    AVK FQ    L   G+V   T
Sbjct: 160 IEYGGRGNHVQLIQRMLIHLGY-SLSGGADGIFGSSTLKAVKAFQQALYLQVDGIVGPKT 218

Query: 162 LEAM 165
           LE +
Sbjct: 219 LEKL 222


>gi|308172757|ref|YP_003919462.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605621|emb|CBI41992.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 385

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L           P+ G+  A+     +AVK FQ+ 
Sbjct: 304 PLPDGVFKVTNPLIRGAAVKQIQTALAALYYYPDKGAPNNGIDGAYGPKTANAVKRFQLM 363

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+    T   +  
Sbjct: 364 NGLTADGIYGPKTKAKLET 382


>gi|220920237|ref|YP_002495538.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219944843|gb|ACL55235.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 263

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 46/183 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R L     R             V+++  +  L  V+ G   +R  + VGR    T     
Sbjct: 114 RALDGRYRRQIVPYAGGQKPGTVVIDTTSRFLYLVQPGGQAIRYGIGVGRPG-FTWAGIK 172

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I +    P W  P  ++++                                        
Sbjct: 173 TITQKREWPDWTPPPEMLRRR--------------------------------------- 193

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIID 351
           P+     + G  N + +  +   S     +H T EP          +SGC+R+   ++ID
Sbjct: 194 PDLPRHMEGGPANPLGARALYLGSS-LYRIHGTNEPHTIGQS---VSSGCIRMMNEDVID 249

Query: 352 LDV 354
           L  
Sbjct: 250 LYE 252


>gi|262166485|ref|ZP_06034222.1| general secretion pathway protein A [Vibrio mimicus VM223]
 gi|262026201|gb|EEY44869.1| general secretion pathway protein A [Vibrio mimicus VM223]
          Length = 529

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 2/109 (1%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           ++  +      + +           W     R L  G     V  L  +L     L   +
Sbjct: 420 LVGDQRYRIARQWLEPLWHGQYSLLWQGGFSRTLKQGMQGADVALLESKLSQV--LGEPE 477

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                FD  +   V+LFQ    +   G+    TL  + +    +   L+
Sbjct: 478 RPRDQFDKDLSRKVELFQRWQNMQVDGIAGRQTLRRLELLTQQQAPSLK 526


>gi|218531169|ref|YP_002421985.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523472|gb|ACK84057.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 212

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 51/204 (25%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             M +     +      L R       +  +  ++V      L  V+ G   +R  V VG
Sbjct: 51  AWMTLAPKAPLDP---ALARTTVDFATREPVGTLVVETAERRLYLVQPGGKAMRYPVSVG 107

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R         + I+R +  P W     +I +                             
Sbjct: 108 RAG-LAWTGRAEIDRKLEWPDWNPAPEMIGRH---------------------------- 138

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFE 339
                      P+   R + G  + + +  + F    R+  Y +H T EP          
Sbjct: 139 -----------PDLPSRLEGGPFSPIGARALYFAQNRRDTLYRIHGTNEPETIGQ---AV 184

Query: 340 TSGCVRV--RNIIDLDVWLLKDTP 361
           +SGC+R+   +++DL   +   T 
Sbjct: 185 SSGCIRMLNEDVMDLYERVPVGTK 208


>gi|306842573|ref|ZP_07475224.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
 gi|306287429|gb|EFM58909.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
          Length = 210

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 37  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYPTDEKPGTIIVDTREKFLYLIMPEGKAVRY 96

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 97  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 156

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 157 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 190


>gi|289665229|ref|ZP_06486810.1| carboxypeptidase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 446

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G  S  V++L+ +L   G              F    + AV+ FQ  H L   G
Sbjct: 221 DGKLEQGERSEQVKQLQGQLAQLGATGRDGKPLHADGDFGTNTKYAVEQFQRAHALQVDG 280

Query: 156 MVDSSTLEAMN 166
           +V   T  A+ 
Sbjct: 281 VVGQQTQAALG 291


>gi|209886379|ref|YP_002290236.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209874575|gb|ACI94371.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 257

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 45/152 (29%), Gaps = 44/152 (28%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +++ P   L  V+     LR  V VG+    T      I      P W  P  ++++   
Sbjct: 131 VIDTPNKFLYLVQGNGQALRYGVGVGKPG-FTWAGVKTITAKREWPDWTPPAEMLKRR-- 187

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                P+     + G  N + +  +   
Sbjct: 188 -------------------------------------PDLPRHMEGGPDNPLGARAMYLG 210

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           S     +H + EP          +SGC+R+RN
Sbjct: 211 SS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 238


>gi|119487720|ref|ZP_01621229.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
 gi|119455553|gb|EAW36690.1| endopeptidase, cell wall lytic activity [Lyngbya sp. PCC 8106]
          Length = 227

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L+ G+    V+ ++ +L   G    +      +    + AVK FQ  +GL   G+V  S
Sbjct: 63  SLYYGDYGSDVKDVQHKLAYYGYFSYNAT--GYYGKVTKHAVKAFQRDYGLHVDGVVGPS 120

Query: 161 TLEAMN 166
           T  AM 
Sbjct: 121 TASAMG 126



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V +L+++L   G    +      +    + AVK FQ  +GL   G+    TL AM 
Sbjct: 172 VTKLQDQLANYGYFHANST--GYYGKITKHAVKAFQYDYGLHADGIAGPKTLRAMG 225


>gi|258513554|ref|YP_003189776.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777259|gb|ACV61153.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 175

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                + +  +        Y +H T  P          ++GC+R++N  I ++  ++   
Sbjct: 52  NPGGMLGTRWLGLNIPGGVYGIHGTNNPDSIGK---AVSNGCIRMQNQDIEEIFPYIAIG 108

Query: 360 T 360
           T
Sbjct: 109 T 109


>gi|229091754|ref|ZP_04222954.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-42]
 gi|228691582|gb|EEL45335.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-42]
          Length = 253

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYNKSTANKGNSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|159901701|ref|YP_001547947.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159894740|gb|ABX07819.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 322

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 70  ISKETIAQTE-----KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
              +T+A  +     K +     I+    W +L I   + G+ +V V+ L+++L   G  
Sbjct: 64  FGDQTLATVKSFQGSKGLTK-DGIVGPNTWEKLVIET-NQGDVNVVVKALQKQLNKHG-- 119

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             S  +   F A   +AVK FQ R GL   G V  +T  A+    
Sbjct: 120 -ASLTVDGDFGAATLTAVKSFQGRKGLTQDGSVGPNTWAALTGNA 163



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            +   W ++       G+S V+V  ++  L   G    S  +   F     + VK FQ  
Sbjct: 27  AAARTWAQVND-----GDSGVNVYTVQALLKQRGY---SLDVDGDFGDQTLATVKSFQGS 78

Query: 149 HGLDPSGMVDSSTLEAMNV 167
            GL   G+V  +T E + +
Sbjct: 79  KGLTKDGIVGPNTWEKLVI 97


>gi|295705989|ref|YP_003599064.1| putative cell wall endopeptidase [Bacillus megaterium DSM 319]
 gi|294803648|gb|ADF40714.1| putative cell wall endopeptidase [Bacillus megaterium DSM 319]
          Length = 231

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G ++  V++++  L   G L     +S  F+   + AV  FQ +H L+  G+V  +
Sbjct: 36  VLKQGMTNDDVEQVKTVLKDKGFLKGE--VSRYFNYETKKAVMAFQEKHNLEADGVVGEN 93

Query: 161 TLEAMNV 167
           T  A+  
Sbjct: 94  TYNALGK 100


>gi|294500636|ref|YP_003564336.1| putative cell wall endopeptidase [Bacillus megaterium QM B1551]
 gi|294350573|gb|ADE70902.1| putative cell wall endopeptidase [Bacillus megaterium QM B1551]
          Length = 224

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G ++  V++++  L   G L     +S  F+   + AV  FQ +H L+  G+V  +
Sbjct: 29  VLKQGMTNDDVEQVKTVLKDKGFLKGE--VSRYFNYETKKAVMAFQEKHNLEADGVVGEN 86

Query: 161 TLEAMNV 167
           T  A+  
Sbjct: 87  TYNALGK 93


>gi|226939342|ref|YP_002794415.1| hypothetical protein LHK_00411 [Laribacter hongkongensis HLHK9]
 gi|226941506|ref|YP_002796580.1| hypothetical protein LHK_02590 [Laribacter hongkongensis HLHK9]
 gi|226714268|gb|ACO73406.1| Peptidoglycan-binding domain 1 protein precursor [Laribacter
           hongkongensis HLHK9]
 gi|226716433|gb|ACO75571.1| Peptidoglycan-binding domain 1 protein precursor [Laribacter
           hongkongensis HLHK9]
          Length = 267

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++  +V  L+++L   G           F     +AV+ FQ + GL   G V   T
Sbjct: 4   LKQGSTGSAVTVLQQQLNRLGFALEP---DGWFGEATRAAVRAFQRQAGLLDDGKVGPVT 60

Query: 162 LEAMN 166
            EA+ 
Sbjct: 61  REALQ 65


>gi|255658560|ref|ZP_05403969.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
 gi|260849364|gb|EEX69371.1| endopeptidase, cell wall lytic activity [Mitsuokella multacida DSM
           20544]
          Length = 254

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L L +S   V  L+++L   G     K +   F    +  V  FQ  + L  +G+V
Sbjct: 26  AAPVLKLNSSGRDVMLLQQKLQNVGY--TIKDIDGIFGEETQRIVTQFQKDNNLRATGVV 83

Query: 158 DSSTLEAMN 166
           +++T  A+ 
Sbjct: 84  NNATWRALK 92


>gi|196041668|ref|ZP_03108959.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus NVH0597-99]
 gi|196027437|gb|EDX66053.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus NVH0597-99]
          Length = 253

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGSSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|196032602|ref|ZP_03100016.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus W]
 gi|218903872|ref|YP_002451706.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH820]
 gi|228927802|ref|ZP_04090850.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228946365|ref|ZP_04108687.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229122301|ref|ZP_04251515.1| Spore cortex-lytic enzyme [Bacillus cereus 95/8201]
 gi|195995353|gb|EDX59307.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus W]
 gi|218539399|gb|ACK91797.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH820]
 gi|228661150|gb|EEL16776.1| Spore cortex-lytic enzyme [Bacillus cereus 95/8201]
 gi|228813291|gb|EEM59590.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228831865|gb|EEM77454.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 253

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGSSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|118478116|ref|YP_895267.1| spore cortex-lytic enzyme [Bacillus thuringiensis str. Al Hakam]
 gi|196043628|ref|ZP_03110866.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB108]
 gi|225864724|ref|YP_002750102.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB102]
 gi|228934029|ref|ZP_04096872.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|229184969|ref|ZP_04312159.1| Spore cortex-lytic enzyme [Bacillus cereus BGSC 6E1]
 gi|118417341|gb|ABK85760.1| spore cortex-lytic enzyme [Bacillus thuringiensis str. Al Hakam]
 gi|196025937|gb|EDX64606.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB108]
 gi|225788886|gb|ACO29103.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus 03BB102]
 gi|228598444|gb|EEK56074.1| Spore cortex-lytic enzyme [Bacillus cereus BGSC 6E1]
 gi|228825725|gb|EEM71515.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 253

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGSSGGTAQENKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|39996637|ref|NP_952588.1| general secretion pathway protein-related protein [Geobacter
           sulfurreducens PCA]
 gi|39983518|gb|AAR34911.1| general secretion pathway protein-related protein [Geobacter
           sulfurreducens PCA]
 gi|298505651|gb|ADI84374.1| peptidoglycan-binding ATPase, putative [Geobacter sulfurreducens
           KN400]
          Length = 540

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 94  WPELPIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W      PL    G+    V+ L+E L  +G  D        FDA  E  V+ FQ   GL
Sbjct: 449 WKNFHGIPLRTRAGSRGKGVKPLQELLKGAGFYDEKPTGD--FDAATEEGVRRFQQSEGL 506

Query: 152 DPSGMVDSSTLE 163
            P G     TL 
Sbjct: 507 QPDGKAGEKTLA 518


>gi|307353609|ref|YP_003894660.1| peptidoglycan-binding domain 1 protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156842|gb|ADN36222.1| Peptidoglycan-binding domain 1 protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 807

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G+    V  L+ +L   G       +   F      AV  FQ   GL   G++   
Sbjct: 2   SLKIGSKGEPVCELQSKLKELGY--DPGEVDGNFGQVTRKAVSKFQENKGLSIDGVIGPE 59

Query: 161 TLEAMNV 167
           ++ A+ +
Sbjct: 60  SVNALGI 66


>gi|146297696|ref|YP_001181467.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145411272|gb|ABP68276.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 234

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G++   V  ++ RL   G       +   +   +E+A+ LFQ ++GL  +  +  
Sbjct: 165 RTIFPGDTGDDVMAVQRRLKELGFYHGE--VDGKYGLAMEAAINLFQKKNGLPITNKITP 222

Query: 160 STLEAMN 166
             L+ M 
Sbjct: 223 YLLKKMG 229



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 40/153 (26%), Gaps = 21/153 (13%)

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSP 291
           I   +F+ ++  P  I      + L     Y+  N I         GK      V     
Sbjct: 32  ILISVFSQHFSNPYLIFVSIDDSKL-----YVFKNGILYKSYPISPGKPSTPTPVGTFRI 86

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN-- 348
               +         +      +    R     +H T             + GCVR+RN  
Sbjct: 87  ISKAYW-------GDGFGGRWMGLNVRYGKYGIHGTIYENYIGA---HVSQGCVRMRNDD 136

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
           I +L  ++   T            +    T   
Sbjct: 137 IKELFSYIPIGTTVILSEGAYGEFRNGFRTIFP 169


>gi|325924471|ref|ZP_08185993.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
 gi|325545047|gb|EGD16379.1| putative peptidoglycan binding protein [Xanthomonas gardneri ATCC
            19865]
          Length = 1092

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 102  LHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG+    V+ L+ RL      G    +      +    E AV+ FQ   GL  +G+  
Sbjct: 948  LRLGDRGQEVEFLQYRLQQVDARGPNGQAVPQDGHYGPETEHAVRQFQQDQGLPATGVAG 1007

Query: 159  SSTLEAMNVPVDLRIRQLQ 177
                EA++     R   L+
Sbjct: 1008 PDLDEALSQAQHARREALK 1026


>gi|260583839|ref|ZP_05851587.1| carboxyl protease [Granulicatella elegans ATCC 700633]
 gi|260158465|gb|EEW93533.1| carboxyl protease [Granulicatella elegans ATCC 700633]
          Length = 485

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 3/89 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G  S +V  +   L   G    S      FD   + AVK +Q + GL  +G VD 
Sbjct: 400 ETLKVGTVSQNVLSVETILKGLGY---SVTADGYFDEATKEAVKAYQQKEGLTATGEVDE 456

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
            T + +   V   I+Q        K+LL+
Sbjct: 457 ETAQKLMNSVRELIQQNDTQYQAAKELLK 485


>gi|149182876|ref|ZP_01861336.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. SG-1]
 gi|148849435|gb|EDL63625.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. SG-1]
          Length = 296

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G    +  +   F      AV+ FQ   GL   G+V   T
Sbjct: 45  IQKGATGDDVIELQSRLQYIGYY--NGNIDGVFGWGTYWAVRNFQYEFGLPIDGLVGQET 102

Query: 162 LEAMNV 167
            + +  
Sbjct: 103 KDKLVK 108


>gi|110633216|ref|YP_673424.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110284200|gb|ABG62259.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 247

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 34/198 (17%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++    +R + +         ++++     L  V  G   +R  V +GR     
Sbjct: 69  PAVPVSRMDPRYLRQEVVDPTGEAPGSIVIDTSQHFLYLVRGGGRAMRYGVGLGREGFA- 127

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I+R    P W  P  +I++     L +                  E      +W
Sbjct: 128 WAGRAQIDRKAMWPKWHPPAEMIERQ--PELEK---------------YKTEYDKATNEW 170

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       +PG +N + +  +  Y   ++  Y +H +PE           +SGCVR
Sbjct: 171 RGG--------MEPGIMNPLGARAMYLYQDGKDTLYRIHGSPEWWSIGKS---VSSGCVR 219

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   + + TP
Sbjct: 220 MINQDVIDLYDRVPEGTP 237


>gi|295445961|gb|ADG21908.1| amidase [Providencia sp. WRB4]
          Length = 268

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 10/130 (7%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     + +       S     +     S         D    ++   +    P   + 
Sbjct: 101 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQQALDK--GQLPTFVAGLAPQHPQ- 157

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             A   +++     +     WP+L  +  L  G  S  V  LRE L  +G LD    +++
Sbjct: 158 -YAVMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITL 214

Query: 133 AFDAYVESAV 142
             D     AV
Sbjct: 215 PGDDTPTDAV 224


>gi|154506082|ref|ZP_02042820.1| hypothetical protein RUMGNA_03624 [Ruminococcus gnavus ATCC 29149]
 gi|153793581|gb|EDN76001.1| hypothetical protein RUMGNA_03624 [Ruminococcus gnavus ATCC 29149]
          Length = 432

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKG--LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++L+E+L +I+G             +      AV+ FQ   GL  +
Sbjct: 348 PGYTLENGSSGAKVRQLQEQLNVIAGAYPALPKIQTDGVYGPATAEAVRKFQEIFGLPQT 407

Query: 155 GMVDSSTLEAMNV 167
           G VD  T   ++ 
Sbjct: 408 GTVDYRTWYKISQ 420


>gi|78221508|ref|YP_383255.1| hypothetical protein Gmet_0285 [Geobacter metallireducens GS-15]
 gi|78192763|gb|ABB30530.1| hypothetical protein Gmet_0285 [Geobacter metallireducens GS-15]
          Length = 292

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G+    V +L++ L   G    +      F    E+A++ FQ + GL  +G+V  
Sbjct: 227 DWLQKGDRGPKVVQLQKALKSRGY---NLKSDGVFGKKTETALQDFQRKQGLPDNGIVGP 283

Query: 160 S 160
            
Sbjct: 284 K 284


>gi|254501216|ref|ZP_05113367.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222437287|gb|EEE43966.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 246

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 84/296 (28%), Gaps = 74/296 (25%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S E      K ++  + +++ G    L    L    +   V          G  D     
Sbjct: 8   STEAPLALSKGLSR-RSLMAGGL--VLAAGTLAGCQTYEQVV---------GLPDQPPLP 55

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
              FD     A         L         T  A+N          QV   + ++     
Sbjct: 56  DEEFDYASAYA--------ALPD----GDFTWPAINYKAFDEQYLRQVVEYKTRERPGTI 103

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           +   Y         L  V  G   LR  + VGR         + I     +P W  PR +
Sbjct: 104 IVDPY------NNYLYWVLPGGKALRYGIGVGRAGFA-WSGEALIRVKRPHPIWRPPREM 156

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           I +     L +   Y +                                  PG  N + +
Sbjct: 157 IARK--PSLER---YWEKG------------------------------FPPGLRNPLGA 181

Query: 311 TKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             ++ +    +  Y +H T +P          +SGC+R+  +++IDL   +   T 
Sbjct: 182 RAMDLWQGSVDTLYRIHGTNKPSSIGKS---VSSGCIRMWQQDVIDLFDRVPLRTK 234


>gi|156973179|ref|YP_001444086.1| Type II secretory pathway, component ExeA [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524773|gb|ABU69859.1| hypothetical protein VIBHAR_00859 [Vibrio harveyi ATCC BAA-1116]
          Length = 541

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     ++  L + L  +  ++     S  +D  ++  V+LFQ   G+  
Sbjct: 453 WQAPLKDTLRLDMEGPAIDVLDQLLAQA--VNEQPLGSDIYDGALKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL-QVNLMR 182
            G+    TLE +   V +   QL Q+N   
Sbjct: 511 DGIAGKHTLERLQQSVQIDAPQLKQINEED 540


>gi|328910876|gb|AEB62472.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 385

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L           P+ G+  A+     +AVK FQ+ 
Sbjct: 304 PLPDGVFKVTNPLIRGAAVKQIQTALAALYYYPDKGAPNNGIDGAYGPKTANAVKRFQLM 363

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+    T   +  
Sbjct: 364 NGLTADGIYGPKTKAKLET 382


>gi|227820975|ref|YP_002824945.1| putative exported ErfK/YbiS/YhnG protein [Sinorhizobium fredii
           NGR234]
 gi|227339974|gb|ACP24192.1| putative exported ErfK/YbiS/YhnG protein [Sinorhizobium fredii
           NGR234]
          Length = 231

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 56/196 (28%), Gaps = 43/196 (21%)

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +V +    +  V      ++      R K           V+V+     L  ++      
Sbjct: 32  IVGAKVKRSDVVLAAQP-KKPPQRFWRTKVRFRTDEAPGTVIVDTNNKYLYYIDGPNRAT 90

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           R  + VGR          ++ R    P W  P  + Q++                     
Sbjct: 91  RYGIGVGREG-FGWSGVVKVGRKAEWPAWTPPAEMRQRE--------------------- 128

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILF 332
                           +       Q+ G  N + +  +      R+  + +H T +P   
Sbjct: 129 --------------KEKGRILPITQEGGIDNPLGARALYLYKGGRDTIFRIHGTNQPWTI 174

Query: 333 NNVVRFETSGCVRVRN 348
              +   +SGC+R+ N
Sbjct: 175 GQNM---SSGCIRMMN 187


>gi|317057187|ref|YP_004105654.1| spore cortex-lytic enzyme [Ruminococcus albus 7]
 gi|315449456|gb|ADU23020.1| spore cortex-lytic enzyme [Ruminococcus albus 7]
          Length = 225

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+    V+ ++E+L   G       ++  +     +AVK FQ + G+  +G     TL+
Sbjct: 39  IGSYGNEVRAIQEKLKERGLFK--ANVTGYYGEITRNAVKAFQKQQGITQTGTAGPITLK 96

Query: 164 AMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRYV 196
           A+ + +       + N+  + + +  +  G  YV
Sbjct: 97  ALGISIGTVPAATEANIDLLARIISAEARGEPYV 130


>gi|256788031|ref|ZP_05526462.1| peptidodoglycan-binding membrane protein [Streptomyces lividans
           TK24]
 gi|289771919|ref|ZP_06531297.1| peptidoglycan-binding membrane protein [Streptomyces lividans TK24]
 gi|289702118|gb|EFD69547.1| peptidoglycan-binding membrane protein [Streptomyces lividans TK24]
          Length = 409

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 36/109 (33%), Gaps = 20/109 (18%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII--- 120
            S +P  S  T A             + G         L  G+    V  L++RL     
Sbjct: 309 RSAVPSQSTTTPAD--------DAPQASGDDDSPDGGTLSRGDQGPEVVELQQRLKEKWM 360

Query: 121 -SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDSSTLEAMN 166
             GDLD        +D  VE AV+ +Q  + +     G+    T   + 
Sbjct: 361 YWGDLDGD------YDRQVEDAVRQYQWENRIRTDRVGVYGPDTRRKLE 403


>gi|256824326|ref|YP_003148286.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
 gi|256687719|gb|ACV05521.1| cell wall-associated hydrolase, invasion-associated protein
           [Kytococcus sedentarius DSM 20547]
          Length = 422

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/72 (30%), Positives = 32/72 (44%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L   PL  G+    VQRL+  L   G++ P   L   + A    AV+ FQ R GL   G
Sbjct: 35  RLGPYPLRPGHRGGYVQRLQWALNKVGNVTPKVALDGVYGAITTRAVRAFQTRQGLLVDG 94

Query: 156 MVDSSTLEAMNV 167
           +  + T   ++ 
Sbjct: 95  IAGTGTKRRLDA 106



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 5/69 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +P+ LG +   V+ +  RL I         L          AVK FQ  HGL   G+V
Sbjct: 198 SGQPIKLGWTGTRVKLVLRRLGI-----DQGQLLHRMTPAAVDAVKRFQRAHGLTADGVV 252

Query: 158 DSSTLEAMN 166
              T  AM 
Sbjct: 253 GPRTWAAMG 261


>gi|319646306|ref|ZP_08000536.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
 gi|317392056|gb|EFV72853.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. BT1B_CT2]
          Length = 294

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V++++E L            + G+   +     +AVK FQ+ 
Sbjct: 213 TLPTGIYKYKSPMMKGTAVRQIQEALAALYFYPDKEAKNNGIDGYYGPKTANAVKRFQLM 272

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL   G+    T   +  
Sbjct: 273 HGLSADGIYGPKTKAKIEA 291


>gi|319764568|ref|YP_004128505.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
 gi|317119129|gb|ADV01618.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
          Length = 342

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PE   + L     S  V+ L+ RL  +  L     +   +       V+ FQ  HGL  +
Sbjct: 44  PEPLAQELRHRMESPLVRELQVRLRHANYLALY-DVDDRYGLKTRETVRKFQKDHGLRET 102

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           G+VD +T + +             N        
Sbjct: 103 GVVDQATWDRLLPRSHKPTAAELGNTDVGPWFT 135



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G +   ++ L+ RL  +G       +   F    + A+  F+ R GL  S ++D  T  
Sbjct: 137 PGQAGY-IRELQHRLRQAGHY--QGAIDGEFHGATQQAISGFRARVGLPASHVMDERTWA 193

Query: 164 A-MNVPVDLRIRQLQVNLMRIKKLLEQKMG---LRYVLVNIPAASLEAVENGKVGLRSTV 219
             +    + R  QL                    R V ++     +  V +G+       
Sbjct: 194 RLIAKTRNPRYAQLFDAPPASTLAQALDPRCATGRVVCISREQKRMSLVVDGRTLFTREA 253

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVI 246
              R   ++     RI  +  +    I
Sbjct: 254 RFARPGWESDKGEFRIWYMNSDTVSTI 280


>gi|304392960|ref|ZP_07374891.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303294958|gb|EFL89327.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 232

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 42/197 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + +RQ++    R +       G   ++V+     L   +     +R  V +GR     
Sbjct: 68  PAINLRQVKPQFFRREVDNPTGQGPGTLVVDTKNFYLYWPQANGRAMRYGVGLGRAGFD- 126

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
              +  I      P W  P  +I ++                             +   W
Sbjct: 127 WSGNGVIQWKQRWPKWTPPAEMIARE----------------------------PDLEKW 158

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H +PE           +SGCVR
Sbjct: 159 SAANGGM-----PPGLENPLGARALYIFQDGKDTLYRVHGSPEAFSIGK---AVSSGCVR 210

Query: 346 V--RNIIDLDVWLLKDT 360
           +  ++IIDL   +   +
Sbjct: 211 LLNQDIIDLYERVPSGS 227


>gi|119504858|ref|ZP_01626936.1| general secretion pathway protein A [marine gamma proteobacterium
           HTCC2080]
 gi|119459463|gb|EAW40560.1| general secretion pathway protein A [marine gamma proteobacterium
           HTCC2080]
          Length = 555

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 16/169 (9%)

Query: 32  HASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP---IISKETIAQTE------KAI 82
            A V D +I  +   +++ +     +   + +  + P   ++S + I             
Sbjct: 393 TAQVWDSVIALNRPVMLDMQTPARFSAATLVVAFEGPLAWVLSNDGIKSIRLVDMATAWR 452

Query: 83  AFYQDILSRG-GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
             Y+       GW     RPL  G+   +V  + + L  + D   +      F   +   
Sbjct: 453 GRYRMFWQPPQGW----NRPLVEGDIDPAVAVVAQ-LFATLDQQVTPLTKQRFTPALAER 507

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           V+LFQ ++ L   G+V   TL  +N  +   +      L R + L+E  
Sbjct: 508 VRLFQAQNNLTADGVVGVQTLLKLNDALGKGLVS-GAALRRAQWLMEGP 555


>gi|90419250|ref|ZP_01227160.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336187|gb|EAS49928.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 270

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + +  L   L R          +  ++V+ PA  L  V      +R  + VGR    +
Sbjct: 97  PAVDVSNLDRRLWRQVVDYPTTERVGTLVVDTPAKYLYLVMEEGTAMRYGIGVGR-GGFS 155

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  +I+++                             E   +
Sbjct: 156 WSGRATIAYKRKWPTWTPPAEMIKRE----------------------------PELAPY 187

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           P   N + +  +      R+  Y +H T +           +SGC+R
Sbjct: 188 SAANGGM-----PPSLDNPLGARALYIFQDGRDTLYRLHGTNQAWSIGK---AVSSGCIR 239

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +   TP
Sbjct: 240 LLNQDVIDLYGRVPDGTP 257


>gi|330815101|ref|YP_004358806.1| Gp43, bacteriophage-acquired protein [Burkholderia gladioli BSR3]
 gi|327367494|gb|AEA58850.1| Gp43, bacteriophage-acquired protein [Burkholderia gladioli BSR3]
          Length = 270

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LH  +    V  L++RL+ +G       ++  +D   E AVK  Q   GL   G+    
Sbjct: 3   VLHFNDCGAEVGLLQQRLVRAGY---PLAVTHIYDEATERAVKAVQAAAGLVVDGIAGPK 59

Query: 161 TLEAMNVPVDLRIRQLQVNL 180
           T  A+             +L
Sbjct: 60  TYNALATGQRDPRDLTNADL 79


>gi|316933107|ref|YP_004108089.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600821|gb|ADU43356.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 387

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 57/192 (29%), Gaps = 48/192 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   +  QL  NL R +     K     ++V+     L  V      +R  V VGR D
Sbjct: 180 EQPDADQSVQLPPNLRRQEVDFATKEPAGTIVVDTANTHLYYVLGNGRAVRYGVRVGR-D 238

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +I R    P W  P  +I++                                
Sbjct: 239 GFTWNGVQKITRKAEWPDWHPPAEMIERQ------------------------------- 267

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 268 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 314

Query: 345 RV--RNIIDLDV 354
            +   ++ DL  
Sbjct: 315 GMLNEDVEDLFE 326


>gi|291545276|emb|CBL18385.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. 18P13]
          Length = 463

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P RPL  G+SS  V+ ++ RL  I      +         F     +AV+ FQ    
Sbjct: 175 PSYPERPLQEGDSSDDVRAIQIRLRRIAQNYPAIPVIPDTDGVFGTPTAAAVEEFQRIFS 234

Query: 151 LDPSGMVDSSTLEAMN 166
           L  +G+VD ST   + 
Sbjct: 235 LPATGVVDQSTWYRIE 250



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 8/123 (6%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---IRPLHLGN 106
           + F    +    G+         E I  + K +A       +  +  +       L  G 
Sbjct: 227 EEFQRIFSLPATGVVDQSTWYRIEYIYNSVKKLAELSSEGEQ--FENVQKQYTEDLRPGM 284

Query: 107 SSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            S+ V+ ++  L + G          ++  +     ++V+ FQ   GL  +G+++ +T  
Sbjct: 285 ESMQVKLVQYYLAVVGAYYEQVQPVEITGYYGDQTAASVRSFQQVFGLPQTGIINRATWN 344

Query: 164 AMN 166
            + 
Sbjct: 345 QLT 347



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIIS-GDLDPSKGLSVA--FDAYVESAVKLFQMRHGLDPS 154
           P   L  G +S +V+  +E L    G       ++    F     SAV  FQ   GL+ +
Sbjct: 369 PGTVLKEGTTSEAVRIAQEYLNFLHGVYPQIPAVNNTGYFGPVTRSAVLAFQRLMGLEEN 428

Query: 155 GMVDSSTLEAMNV 167
           G++   T + +  
Sbjct: 429 GLIGPITWDELAR 441


>gi|110632447|ref|YP_672655.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110283431|gb|ABG61490.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 143

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G++   V+ L+  L+ +G    +  +   +    +SAV  FQ   GL   G+    T
Sbjct: 2   LRMGSTGARVRELQALLVRAG---HALKVDGDYGPSTKSAVLAFQRFAGLIADGVAGPET 58

Query: 162 LEA---MNVPVDLR 172
           + A     V  D R
Sbjct: 59  MRALASFKVAPDER 72


>gi|307304290|ref|ZP_07584042.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307321689|ref|ZP_07601079.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306892653|gb|EFN23449.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306902758|gb|EFN33351.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 228

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++  RQ+     R +           ++V+     L  V+ G   +R  V +GR     
Sbjct: 64  PEVPFRQIDPRFYRQEVGDPFGEAPGTIVVDTADRYLYLVQPGGRAMRYGVGLGREGFA- 122

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  +I +    +L +   Y  DN                   
Sbjct: 123 WSGRGLIQWKQKWPKWTPPNEMIARQ--PVLAK---YSADNGGM---------------- 161

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + S  +  F +  +    +H TPE           +SGCVR
Sbjct: 162 ------------PPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIGK---AVSSGCVR 206

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +    P
Sbjct: 207 MVNQDVIDLYDRVRNKAP 224


>gi|284919760|emb|CAX65537.1| putative ErfK ErfK/YbiS/YcfS/YnhG family protein [Enterobacter
           hormaechei]
          Length = 327

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 44/155 (28%), Gaps = 42/155 (27%)

Query: 196 VLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTP-ILHSRINRIMFNPYWVIPRSIIQK 253
           ++VN+    L     G        + +G+  R+TP    + + R    P W  P +  ++
Sbjct: 97  IVVNVAEMRLYYYPPGSNTVEVLPIGIGQAGRETPRNWVTAVERKQEGPTW-SPTANTRR 155

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
                 +  P +                                     G  N M    +
Sbjct: 156 AYAKEGKTLPAFF----------------------------------PAGPDNPMGLYAL 181

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                     H T     F   +R  + GC+R+RN
Sbjct: 182 YIGRLYAI--HGTNSN--FGIGLR-VSQGCIRLRN 211


>gi|168185528|ref|ZP_02620163.1| spore cortex-lytic enzyme [Clostridium botulinum C str. Eklund]
 gi|169296468|gb|EDS78601.1| spore cortex-lytic enzyme [Clostridium botulinum C str. Eklund]
          Length = 241

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G+ +  V  ++ RL           L   +      AVK FQ ++GL   G
Sbjct: 34  SIKTSVYKYGSKNNIVTEIQRRLKAWDYY--EGELDGKYGYETYLAVKDFQRKNGLIVDG 91

Query: 156 MVDSSTLEAMNVP 168
           +V  STL ++ + 
Sbjct: 92  IVGDSTLASLGIN 104


>gi|300864057|ref|ZP_07108957.1| hypothetical protein OSCI_580016 [Oscillatoria sp. PCC 6506]
 gi|300337936|emb|CBN54103.1| hypothetical protein OSCI_580016 [Oscillatoria sp. PCC 6506]
          Length = 203

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           A  +   ++   P+  I+ L LG+S+  V++L+ +L   G       ++  F+   + AV
Sbjct: 116 AKLESGEAQPYSPQTGIKLLKLGSSNGCVKQLQLQLAALGYY--RGKINGRFEYSTQVAV 173

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           + FQ    L+  G+V S T +A+N  V  
Sbjct: 174 QQFQQDSSLEADGIVGSVTRKALNDKVKD 202



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  L+ RL   G    +   +  F    + A+  FQ  + L  SG++DS T   +     
Sbjct: 64  VVELQNRLKELGYFPKNVKSTGFFGTITQEALAEFQCANNLLSSGILDSETSAKLESGEA 123

Query: 171 LR 172
             
Sbjct: 124 QP 125


>gi|116251224|ref|YP_767062.1| hypothetical protein RL1458 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255872|emb|CAK06953.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 204

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 48/201 (23%)

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVN-----LMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +++S T  A        ++Q+ ++     L R +   E       V+V+ PA     V  
Sbjct: 23  VLNSQTNYAALPDEKFPLKQVPIDKIRPELRRQEVAYETTHAAGTVIVDTPARRAYYVLG 82

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           G   +R  V VGR        ++ I R    P W    ++ +++                
Sbjct: 83  GGRAMRYGVGVGREG-LAFAGNAYIGRKAEWPSWTPTENMQRRE---------------- 125

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTP 327
                                           G  N + +  +      +  +  +H T 
Sbjct: 126 --------------------ERYRKLAGGMPGGPNNPLGARAMYLFRGGNDTHFRIHGTN 165

Query: 328 EPILFNNVVRFETSGCVRVRN 348
           +P          +SGCVR+ N
Sbjct: 166 QPQSIG---LAMSSGCVRMMN 183


>gi|90419953|ref|ZP_01227862.1| ErfK/YbiS/YcfS/YhnG family protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335994|gb|EAS49742.1| ErfK/YbiS/YcfS/YhnG family protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 297

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 66/219 (30%), Gaps = 54/219 (24%)

Query: 158 DSSTLEAMNVPVDLRIRQ----------LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           D +T + + V  +    +                R +  +E +     ++V+     L  
Sbjct: 86  DHATNKWVTVSAERVAARTQGRALAQRGPAAEYHRRQVRIETREKPGTIIVDSQRKFLYF 145

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           VE   +  R  V VGR           + R    P W  P S+I+++             
Sbjct: 146 VEGNGMATRYGVGVGREG-FGWSGRMSVGRKAEWPGWTPPPSMIKRE------------- 191

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MH 324
                                   +          G  N + +  +      R++ + +H
Sbjct: 192 ----------------------RAKGRILPAHMKGGPANPLGARAMYLYRGGRDSMFRIH 229

Query: 325 DTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            T +P      +   +SGC+R+  +++  L   +   T 
Sbjct: 230 GTNQPWTIGQNM---SSGCIRMMNQDVEHLYERVPNGTK 265


>gi|90423674|ref|YP_532044.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90105688|gb|ABD87725.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 236

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 46/176 (26%), Gaps = 46/176 (26%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L   L R       +     ++++     L  V      +R  + VGR D  T      I
Sbjct: 75  LPARLKRQVVNYTTREAQGTIVIDTANTYLYLVLGNGRAMRYGIGVGR-DGFTWSGVQPI 133

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
            R    P W  P  +I +                                        P 
Sbjct: 134 TRKAEWPNWTPPAEMIARQ---------------------------------------PY 154

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                  G  N + +  +      + Y +H T  P          +SGC+R+ N  
Sbjct: 155 LPRFMAGGPGNPLGARAMYL--GGSIYRIHGTNAPATIGTR---VSSGCIRLTNAD 205


>gi|114764039|ref|ZP_01443278.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114543397|gb|EAU46412.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. HTCC2601]
          Length = 186

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 298 FRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           + Q  G  N + +  +  F +  +TY  +H T  P       R  ++GC+R+   ++IDL
Sbjct: 117 YVQPGGPSNPLGARALYLFQNGRDTYFRIHGTTAPESIG---RSVSNGCIRMLNEHVIDL 173

Query: 353 DVWLLKDTP 361
              +   TP
Sbjct: 174 YNRVPVGTP 182


>gi|88813439|ref|ZP_01128675.1| N-acetylmuramoyl-L-alanine amidase, putative [Nitrococcus mobilis
           Nb-231]
 gi|88789310|gb|EAR20441.1| N-acetylmuramoyl-L-alanine amidase, putative [Nitrococcus mobilis
           Nb-231]
          Length = 236

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 35/106 (33%), Gaps = 19/106 (17%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP---LHLGNSSVSVQRLRERLIIS 121
           S  P +S  T + T  AI            P +P      L L      V  L+  L  +
Sbjct: 143 SLAPTVSPLT-SDTADAI------------PTVPRPTEPLLRLMARGQPVLHLQAMLSRA 189

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           G +         F     +AV+ FQ    L   G+V   T  A+  
Sbjct: 190 GHILEE---DGIFGQNTLAAVQAFQRSQDLKADGIVGPRTWTALRA 232


>gi|237814608|ref|ZP_04593606.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|237789445|gb|EEP63655.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 210

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 37  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 96

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 97  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 156

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 157 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 190


>gi|225851674|ref|YP_002731907.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|256264816|ref|ZP_05467348.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|225640039|gb|ACN99952.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|263095226|gb|EEZ18895.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|326408160|gb|ADZ65225.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M28]
 gi|326537870|gb|ADZ86085.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 206

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|126729498|ref|ZP_01745311.1| spore cortex-lytic enzyme precursor [Sagittula stellata E-37]
 gi|126709617|gb|EBA08670.1| spore cortex-lytic enzyme precursor [Sagittula stellata E-37]
          Length = 335

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 2/108 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V+ L+E L               FD    +A+  FQ  +GL    +    
Sbjct: 174 VLRFGDQGADVRVLQEDLAGLRYFA--GRRDGRFDTLTRAALLAFQADNGLATDAVAGQQ 231

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           T  A+       +R +    +R +     K G    +       L AV
Sbjct: 232 TWAALARAQPRPLRDIAPADLRAEGSSTMKGGDAAEVALTGGGLLAAV 279


>gi|17988092|ref|NP_540726.1| hypothetical protein BMEI1809 [Brucella melitensis bv. 1 str. 16M]
 gi|62289117|ref|YP_220910.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
 gi|82699056|ref|YP_413630.1| hypothetical protein BAB1_0138 [Brucella melitensis biovar Abortus
           2308]
 gi|163842410|ref|YP_001626814.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189023392|ref|YP_001934160.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|254690443|ref|ZP_05153697.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 6 str. 870]
 gi|254694933|ref|ZP_05156761.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 3 str. Tulya]
 gi|254696563|ref|ZP_05158391.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700948|ref|ZP_05162776.1| ErfK/YbiS/YcfS/YnhG [Brucella suis bv. 5 str. 513]
 gi|254731476|ref|ZP_05190054.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 4 str. 292]
 gi|256045930|ref|ZP_05448802.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060281|ref|ZP_05450454.1| ErfK/YbiS/YcfS/YnhG [Brucella neotomae 5K33]
 gi|256112643|ref|ZP_05453564.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 3 str. Ether]
 gi|256258699|ref|ZP_05464235.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus bv. 9 str. C68]
 gi|260546414|ref|ZP_05822154.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260563212|ref|ZP_05833698.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260755995|ref|ZP_05868343.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260759219|ref|ZP_05871567.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260760941|ref|ZP_05873284.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260885015|ref|ZP_05896629.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261215271|ref|ZP_05929552.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261324253|ref|ZP_05963450.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261751467|ref|ZP_05995176.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|265992341|ref|ZP_06104898.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994084|ref|ZP_06106641.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|294851539|ref|ZP_06792212.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NVSL 07-0026]
 gi|297247533|ref|ZP_06931251.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
 gi|306844408|ref|ZP_07476998.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
 gi|17983844|gb|AAL52990.1| protein ybis precursor [Brucella melitensis bv. 1 str. 16M]
 gi|62195249|gb|AAX73549.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
 gi|82615157|emb|CAJ10094.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis biovar Abortus 2308]
 gi|163673133|gb|ABY37244.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189018964|gb|ACD71686.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|260096521|gb|EEW80397.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260153228|gb|EEW88320.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260669537|gb|EEX56477.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260671373|gb|EEX58194.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676103|gb|EEX62924.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260874543|gb|EEX81612.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260916878|gb|EEX83739.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261300233|gb|EEY03730.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261741220|gb|EEY29146.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|262765065|gb|EEZ10986.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263003407|gb|EEZ15700.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|294820128|gb|EFG37127.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NVSL 07-0026]
 gi|297174702|gb|EFH34049.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
 gi|306275221|gb|EFM56971.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
          Length = 206

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|317128455|ref|YP_004094737.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315473403|gb|ADU30006.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 171

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 44/170 (25%), Gaps = 57/170 (33%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                   +G  Y++VN     L  +  G+V     +  G+ +  TP     I     +P
Sbjct: 16  WPIGTNPTVGDPYIIVNKSTNELAFIIEGEVRQIYEIATGKTNEHTPEGEYNIIVKAVDP 75

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                                 Y +  +I                               
Sbjct: 76  ----------------------YYRKKDIE----------------------------GG 85

Query: 303 GKINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            K N + +  I F           +H T  P        + T GC+R++N
Sbjct: 86  DKNNPLGTRWIGFDAEETDGRTYGIHGTNNPDSIGQ---YVTLGCIRLKN 132


>gi|294498679|ref|YP_003562379.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294348616|gb|ADE68945.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           QM B1551]
          Length = 188

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V+ L++ L    D+  +  +   F    ++ VK FQ  H L P G+V   
Sbjct: 48  TLRKGSHSSYVKDLQQSLK---DVKYNTSVDGIFGTQTQNVVKEFQTDHSLSPDGIVGPL 104

Query: 161 TLEAMNVPVDLRIR 174
           T  A++     R +
Sbjct: 105 TWAALDENKVERKQ 118


>gi|239989830|ref|ZP_04710494.1| hypothetical protein SrosN1_21180 [Streptomyces roseosporus NRRL
           11379]
 gi|291446846|ref|ZP_06586236.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349793|gb|EFE76697.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 360

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 40/133 (30%), Gaps = 5/133 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L   L   G           +     +AVK +Q  H    +G V  
Sbjct: 121 RTLKPGDKGRDVEQLERNLAELGY--TGFTPDQEYTELTAAAVKRWQKSHDAKQTGKVGP 178

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
              +    P  +RI+ +   +          +        I    L+  E+      + V
Sbjct: 179 G--DVTFAPGKVRIKSVGAGVGEQA-QPGAPVLETTGSERIVTFQLDVAESQLAKAGTKV 235

Query: 220 IVGRVDRQTPILH 232
            V   D  T    
Sbjct: 236 SVELPDGTTAPGK 248


>gi|146337496|ref|YP_001202544.1| hypothetical protein BRADO0342 [Bradyrhizobium sp. ORS278]
 gi|146190302|emb|CAL74298.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 153

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 47/168 (27%), Gaps = 47/168 (27%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++V      L  V +G   +R  V VG+  RQ     ++I+    NP W  P  
Sbjct: 18  DYSPGTIVVKTSERRLYLVLDGSHAMRYPVGVGKAGRQ-WAGTTKIDGKYKNPAWAPPAD 76

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAM 308
           + +                                       + P        G   N M
Sbjct: 77  VKR---------------------------------------DKPELPDVIAGGSPRNPM 97

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
               +         +H T  P        + + GC+R+  ++I DL  
Sbjct: 98  GVAAMTLAGGE-YAIHGTNVPNSVG---GYVSYGCIRMLNQDITDLYD 141


>gi|257069740|ref|YP_003155995.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
 gi|256560558|gb|ACU86405.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
          Length = 372

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG    +V  L++RL   G    S  +   F +    AVK  Q    +   G+V   
Sbjct: 96  KLRLGARGAAVTYLQQRLNAHG---ASLKVDGVFGSATLRAVKNRQSSARIGVDGVVGPK 152

Query: 161 TLEAM 165
           T  A+
Sbjct: 153 TWNAL 157



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GN   +V  L+++L  +G    S  +   F +   SAV+  Q   G+    +V   
Sbjct: 172 KLRQGNRGSAVTTLQKQLNSAG---ASLTVDGVFGSATGSAVRALQSAAGIGVDTVVGPK 228

Query: 161 TLEAMN 166
           T  A+N
Sbjct: 229 TWNALN 234


>gi|220931943|ref|YP_002508851.1| peptidase M23B [Halothermothrix orenii H 168]
 gi|219993253|gb|ACL69856.1| peptidase M23B [Halothermothrix orenii H 168]
          Length = 324

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    L LG+    V+++++ L   G       +   F    +  V+ FQ+ +GLD  G
Sbjct: 6   PVLATTLKLGDRGREVKKVQQILRDLGY---DIEVDSVFGYRTKQVVQAFQLNNGLDVDG 62

Query: 156 MVDSSTLE 163
           +V   TL 
Sbjct: 63  IVGDKTLN 70


>gi|148560099|ref|YP_001258172.1| putative lipoprotein [Brucella ovis ATCC 25840]
 gi|148371356|gb|ABQ61335.1| putative lipoprotein [Brucella ovis ATCC 25840]
          Length = 206

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N +    + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGVRALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|290967759|ref|ZP_06559312.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290782118|gb|EFD94693.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 323

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               H G+    +  +++ L+  G       +   + A  + A++ FQ +HG+   G++ 
Sbjct: 22  GAAFHPGDRGTQITEIQQALVKQGM---HLAVDGDYGADTQEAIRTFQKKHGIYADGVMG 78

Query: 159 SSTLEAM 165
           + T   +
Sbjct: 79  AKTYAVL 85



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V+ +++ L+  G    +  +   F    E A++ FQ R GL   G++   T  A+   V
Sbjct: 120 EVRTIQQALVRQGY---AVDVDGVFGPGTEQALRRFQARRGLTVDGVIGPETFYALTGQV 176


>gi|229060425|ref|ZP_04197788.1| Spore cortex-lytic enzyme [Bacillus cereus AH603]
 gi|229167426|ref|ZP_04295164.1| Spore cortex-lytic enzyme [Bacillus cereus AH621]
 gi|228615988|gb|EEK73075.1| Spore cortex-lytic enzyme [Bacillus cereus AH621]
 gi|228718808|gb|EEL70429.1| Spore cortex-lytic enzyme [Bacillus cereus AH603]
          Length = 259

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQTRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKDTTTNKGNSGGGTQENKPPKSTGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|119484925|ref|ZP_01619407.1| hypothetical protein L8106_15670 [Lyngbya sp. PCC 8106]
 gi|119457743|gb|EAW38867.1| hypothetical protein L8106_15670 [Lyngbya sp. PCC 8106]
          Length = 164

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG +  +V  L+  L I G    +  +   F +  E AVK FQ  + L   G+V S T
Sbjct: 17  LQLGKTGDNVIYLQNSLNIVG---ANLRIDGVFGSDTEIAVKRFQRDNELIIDGIVGSQT 73

Query: 162 LE 163
             
Sbjct: 74  WR 75



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +GN+   V  L+  L    +++ +  +   F      AVKLFQ++HGL  +G+V  +
Sbjct: 94  VLKVGNTGKIVFELQTHL---NNIEANLVVDGIFGVKTLDAVKLFQLKHGLVANGIVGLN 150

Query: 161 TLEAM 165
           T + +
Sbjct: 151 TWKEI 155


>gi|23008960|ref|ZP_00050190.1| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 199

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 50/192 (26%), Gaps = 48/192 (25%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +       + Q    + R             ++V+     L  V      LR  V VGR 
Sbjct: 41  LQQDPAAAVPQ-ASAIGREIVPYSGPHAPGTIVVSTAERRLYLVLPNGEALRYGVGVGRP 99

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              T      I      P W  P  ++++                               
Sbjct: 100 G-FTWGGTQTITMKREWPDWRPPAEMLRRR------------------------------ 128

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                    P+       G  N + +  +   +    Y +H + EP          +SGC
Sbjct: 129 ---------PDLPRYMKGGIENPLGARAMYLGN--TIYRIHGSNEPETIGT---AVSSGC 174

Query: 344 VRVRNIIDLDVW 355
           +R+ N  D+   
Sbjct: 175 IRMTN-EDVADL 185


>gi|291568576|dbj|BAI90848.1| putative transporter [Arthrospira platensis NIES-39]
          Length = 401

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L+ RL   G       +   +      A+  FQ+  GL+ +G+V+  T E +  
Sbjct: 71  DYDIIELQNRLQQKGYYL--GAIDGIYGEQTREAISNFQLDIGLESTGIVNQETWEYLLG 128

Query: 168 PVDLRIRQ 175
              +  ++
Sbjct: 129 NAAVIAQK 136


>gi|149183036|ref|ZP_01861490.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
 gi|148849266|gb|EDL63462.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp. SG-1]
          Length = 210

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG-----LSVAFDAYVESAVKLFQMRHGLDP 153
            R +  G+S   V+ L+ R  ++G    +       +   F +  E+AVK FQ  +GL  
Sbjct: 4   TRTMRNGDSGSDVKELQIR--VAGWASDTASQTYVLVDGVFGSGTEAAVKRFQKAYGLTV 61

Query: 154 SGMVDSST 161
            G+    T
Sbjct: 62  DGIAGPQT 69


>gi|254503879|ref|ZP_05116030.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222439950|gb|EEE46629.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 256

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 42/147 (28%), Gaps = 44/147 (29%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  L  ++N     R  V VG+   +      ++ R    P W  P ++ ++        
Sbjct: 135 ARYLYLIQNDGTARRYGVGVGKPGFE-WAGSHKVTRKAEWPDWRPPAAMRKRR------- 186

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNT 321
                                           P        G  N + +  +        
Sbjct: 187 --------------------------------PELPVFMAGGPDNPLGARALYLG-STLY 213

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRN 348
            +H + +P    +     +SGC+R+RN
Sbjct: 214 RIHGSNQPWTIGH---AVSSGCIRMRN 237


>gi|332982349|ref|YP_004463790.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
 gi|332700027|gb|AEE96968.1| ErfK/YbiS/YcfS/YnhG family protein [Mahella australiensis 50-1 BON]
          Length = 266

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 35/113 (30%), Gaps = 19/113 (16%)

Query: 259 LRQDPQYLKDNN-----IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
           L  +  YL  +N       + + K K      +           +       +   +  +
Sbjct: 82  LEDNVLYLLKDNKVMKKYPVAEGKYKT--PSPIGAWQIVSKRTDW------GSGFGTRWL 133

Query: 314 EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                   Y +H T +P          + GC R++N  + +L   +   TP +
Sbjct: 134 GLNVPWGVYGIHGTNKPDSVGWSS---SHGCFRMQNKHVEELFDLVKVGTPVY 183



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L+ G+ + +V  +++RL   G    +  L   +   +++A+  F+  +GL  +  VD+ T
Sbjct: 199 LNPGDRNSAVMEVQKRLKKLGYY--NGSLDGIYGEGMKAALLKFKKDYGLPYTHTVDAVT 256

Query: 162 LEAMNV 167
            + +N+
Sbjct: 257 YKTLNI 262


>gi|312143244|ref|YP_003994690.1| Peptidoglycan-binding domain 1 protein [Halanaerobium sp.
           'sapolanicus']
 gi|311903895|gb|ADQ14336.1| Peptidoglycan-binding domain 1 protein [Halanaerobium sp.
           'sapolanicus']
          Length = 337

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 2/92 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +   +V++ ++ L   G       +   +      AV  FQ   GL   G++   T
Sbjct: 78  LRENDRGENVKKAQKILRQKGFY--QGEIDGHYGHQTRLAVIKFQKIAGLQADGVLGPKT 135

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           L  +    +  + +  V       +L ++   
Sbjct: 136 LSKLTAEGENDVAEYTVQSGDSLWVLARRFDS 167


>gi|307323213|ref|ZP_07602423.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306890702|gb|EFN21678.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 244

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L LG++   V  L++RL+   ++     ++  +D  +  AV  FQ+ +G+     G+
Sbjct: 172 GDVLTLGDTGPEVTELQKRLLRIPNVYQDGPVNGQYDQSLAQAVSRFQVWYGIRGDANGV 231

Query: 157 VDSSTLEAMN 166
             S+T + + 
Sbjct: 232 YGSATRQQLE 241


>gi|297162440|gb|ADI12152.1| hypothetical protein SBI_09034 [Streptomyces bingchenggensis BCW-1]
          Length = 71

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL--DPSGMVDS 159
           L LG+S   V  L+ RL+   D+     ++  +D  + SAV  FQ+ +G+  D  G+   
Sbjct: 2   LSLGDSGPEVSELQSRLLRIPDVYTGGSVNGQYDQSLASAVARFQLWYGIRGDEDGVYGD 61

Query: 160 STLEAMN 166
            T   + 
Sbjct: 62  DTRRDLE 68


>gi|56421815|ref|YP_149133.1| hypothetical protein GK3280 [Geobacillus kaustophilus HTA426]
 gi|56381657|dbj|BAD77565.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 165

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 11/91 (12%)

Query: 278 GKEVFVEEVDW----NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           G+ +    +       +    +F+   + P       +  +     +   +H T +P   
Sbjct: 74  GRTIRTYPIGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKVH-YGIHGTNDPSSI 132

Query: 333 NNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                + + GC+R+ N  +++L   +   T 
Sbjct: 133 GK---YVSKGCIRMHNKDVLELASIVPNGTE 160


>gi|328884811|emb|CCA58050.1| hypothetical protein SVEN_4764 [Streptomyces venezuelae ATCC 10712]
          Length = 380

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 77  QTEKAIAFYQDILSR--GGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           +    +   +  ++   GG P  P+ PL   G++   V+ L+  L   G          +
Sbjct: 226 RLYALLPRLRHDVAALIGGDPAPPVWPLLRTGDTGERVRALQHLLAGRG---APLVPDGS 282

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           F    E AV+ FQ      P G+    T   + VPV  
Sbjct: 283 FGPATEQAVRDFQRLVRARPDGLAGDQTWHQLGVPVRA 320



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 4/98 (4%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P   +          A    +     W +L   P+  G++  +V+ ++  L   G  
Sbjct: 282 SFGPATEQAVRDFQRLVRARPDGLAGDQTWHQL-GVPVRAGDAGEAVRAVQVLLGARG-- 338

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                    F     +AV  FQ   GL   G+VD+ TL
Sbjct: 339 -VPAEADGLFGPGTAAAVASFQSGAGLPADGLVDARTL 375


>gi|226311326|ref|YP_002771220.1| hypothetical protein BBR47_17390 [Brevibacillus brevis NBRC 100599]
 gi|226094274|dbj|BAH42716.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 368

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG S   V+ L+  L   G        S  FD     AV LFQ R+    +G  D+ 
Sbjct: 131 TLKLGASGERVKELQTMLAGLGY---KVTASGQFDESTRFAVMLFQSRNKQTLTGEADTK 187

Query: 161 TLEAMNVPVDLRIRQ 175
           T  A+         Q
Sbjct: 188 TYTAIQTQYKNNPVQ 202



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G  +  V  + + L      D    +   +++Y    VK FQ ++ L  +G+V+ +
Sbjct: 33  SLKKGMKNSRVLEVEKMLDAL-HYDYKLVVDKTYNSYTVYNVKAFQKKYKLPQTGIVNKT 91

Query: 161 TLEAMNVPVDLRIR 174
           T + +      R +
Sbjct: 92  TYDKLTSVYQARKQ 105


>gi|225180948|ref|ZP_03734396.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
 gi|225168429|gb|EEG77232.1| cell wall hydrolase SleB [Dethiobacter alkaliphilus AHT 1]
          Length = 249

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R + +      V  L+E L   G     +     F      +++ FQ  HGL+P G+V  
Sbjct: 36  RTIRITMRGEDVAELQEFLNEQGY--RDEDAHGIFGPLTYGSLQQFQKDHGLNPDGIVGP 93

Query: 160 STLEAMN 166
            T   + 
Sbjct: 94  KTRRLIQ 100


>gi|116250642|ref|YP_766480.1| ErfK/YbiS/YhnG protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255290|emb|CAK06365.1| putative exported ErfK/YbiS/YhnG protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 230

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 42/188 (22%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A  V V    + ++    R K  L        V+++     L  VE      R  + VGR
Sbjct: 38  AQIVRVAQMPKYVKPQFKRKKVRLVTTEAAGTVIIDTNNKYLYLVEGNNRATRYGIGVGR 97

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D        +I R    P W  P  + +++                             
Sbjct: 98  -DGFGWSGVVKIGRKAEWPSWTPPAEMRRRE----------------------------- 127

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                 + +       Q+ G+ N + +  +      R+  + +H T +P      +   +
Sbjct: 128 ------AAKGHIIPAFQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---S 178

Query: 341 SGCVRVRN 348
           SGC+R+ N
Sbjct: 179 SGCIRMMN 186


>gi|326408062|gb|ADZ65127.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis M28]
 gi|326537779|gb|ADZ85994.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 163

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 2   PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 60

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 61  WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 85

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 86  -KPELEKYRNEQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 141

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 142 LMNQDIIDLYNRVQGKAP 159


>gi|315644947|ref|ZP_07898075.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
 gi|315279658|gb|EFU42960.1| spore cortex-lytic enzyme [Paenibacillus vortex V453]
          Length = 197

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+ +  V  L+ RL           L   + A  ++AV  FQ  +G+   G+ 
Sbjct: 10  AAPLLKPGSENGDVWDLQYRLKTLDFYTQ--PLDGKYGANTKAAVTRFQKEYGVPADGIT 67

Query: 158 DSSTLEAMNV 167
            + T   +  
Sbjct: 68  GAQTWRQLKK 77


>gi|325107830|ref|YP_004268898.1| ErfK/YbiS/YcfS/YnhG family protein [Planctomyces brasiliensis DSM
           5305]
 gi|324968098|gb|ADY58876.1| ErfK/YbiS/YcfS/YnhG family protein [Planctomyces brasiliensis DSM
           5305]
          Length = 436

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 55/183 (30%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R+ +++   +RI + L+   G  + +V+I   +L    +G       V  GR D  TP 
Sbjct: 293 ARLNRVEPEQIRIGETLKVIQGPFHAVVDISDKTLTVHAHGYYVCSFPVATGR-DNATPT 351

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
               +   + NP W  P +                       ++                
Sbjct: 352 GEFPVLNKVENPTWYGPDA-----------------------VVSAND------------ 376

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                          N +    I+  +      H T             ++GCVR+R   
Sbjct: 377 -------------PNNPLGEHWIDLGNGYGV--HGTINQDSIGQ---AVSNGCVRLR-PD 417

Query: 351 DLD 353
           D+ 
Sbjct: 418 DVA 420


>gi|284054140|ref|ZP_06384350.1| extracellular solute-binding protein [Arthrospira platensis str.
           Paraca]
          Length = 401

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L+ RL   G       +   +      A+  FQ+  GL+ +G+V+  T + +  
Sbjct: 71  DYDIIELQNRLQQKGYYL--GAIDGIYGEQTREAISNFQLDIGLENTGIVNQETWDYLLG 128

Query: 168 PVDLRIR 174
              +  +
Sbjct: 129 NAAVIAQ 135


>gi|239943377|ref|ZP_04695314.1| hypothetical protein SrosN15_20443 [Streptomyces roseosporus NRRL
           15998]
          Length = 354

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 40/133 (30%), Gaps = 5/133 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V++L   L   G           +     +AVK +Q  H    +G V  
Sbjct: 115 RTLKPGDKGRDVEQLERNLAELGY--TGFTPDQEYTELTAAAVKRWQKSHDAKQTGKVGP 172

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
              +    P  +RI+ +   +          +        I    L+  E+      + V
Sbjct: 173 G--DVTFAPGKVRIKSVGAGVGEQA-QPGAPVLETTGSERIVTFQLDVAESQLAKAGTKV 229

Query: 220 IVGRVDRQTPILH 232
            V   D  T    
Sbjct: 230 SVELPDGTTAPGK 242


>gi|289579414|ref|YP_003478041.1| carboxyl-terminal protease [Thermoanaerobacter italicus Ab9]
 gi|289529127|gb|ADD03479.1| carboxyl-terminal protease [Thermoanaerobacter italicus Ab9]
          Length = 456

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G+    V+ L++ L I      +      F     +AVK  Q + GL P+G+ D 
Sbjct: 370 GTLKVGSKGNDVKILQKHLNILKF--NAGPEDGIFGPKTANAVKKLQKKAGLTPTGVFDK 427

Query: 160 STLEAMNV 167
           +T +AM  
Sbjct: 428 NTYDAMVK 435


>gi|168187152|ref|ZP_02621787.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           C str. Eklund]
 gi|169294969|gb|EDS77102.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           C str. Eklund]
          Length = 304

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V++L+  L   G    +      F    ++AV  FQ  + L   G+V
Sbjct: 168 SSGLLKIGSKEDKVKQLQVNLNKLGYTCGNA--DGIFGQGTKNAVISFQRNNELSADGIV 225

Query: 158 DSSTLEAMNVPVDLR 172
             ST   +   ++ R
Sbjct: 226 GESTWNKILSNLEDR 240


>gi|331268737|ref|YP_004395229.1| spore-cortex-lytic enzyme [Clostridium botulinum BKT015925]
 gi|329125287|gb|AEB75232.1| spore-cortex-lytic enzyme [Clostridium botulinum BKT015925]
          Length = 221

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +       G     V  ++ RL      D    L   +      AVK FQ ++ L   G
Sbjct: 17  AIKTSVYKYGTKDSIVTEIQRRLKAWDYYDGE--LDGKYGYETYLAVKEFQRKNDLTVDG 74

Query: 156 MVDSSTLEAMNVP 168
           +V   TL ++ + 
Sbjct: 75  IVGDDTLASLGIN 87


>gi|261404509|ref|YP_003240750.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
 gi|261280972|gb|ACX62943.1| spore cortex-lytic enzyme [Paenibacillus sp. Y412MC10]
          Length = 219

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+ +  V  L+ RL           L   + A  ++AV  FQ  +G+   G+ 
Sbjct: 32  AAPLLKPGSENGDVWDLQYRLKTLDFYTQ--PLDGKYGANTKAAVSRFQKEYGVPADGIT 89

Query: 158 DSSTLEAMNV 167
            + T   +  
Sbjct: 90  GAQTWRQLKK 99


>gi|160932600|ref|ZP_02079990.1| hypothetical protein CLOLEP_01439 [Clostridium leptum DSM 753]
 gi|156868559|gb|EDO61931.1| hypothetical protein CLOLEP_01439 [Clostridium leptum DSM 753]
          Length = 241

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V++++ +L   G    +  +   + +  ++AV  FQ + GLDP G+  + TL
Sbjct: 52  KYGSQGEEVRQIQTKLKELGLY--TGSIDGIYGSGTKNAVIQFQKQQGLDPDGIAGTKTL 109

Query: 163 EAMN 166
            A+ 
Sbjct: 110 TALG 113


>gi|228901287|ref|ZP_04065483.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 4222]
 gi|228858352|gb|EEN02816.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 4222]
          Length = 253

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGNSGSTAQKNKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|255307414|ref|ZP_05351585.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile ATCC 43255]
          Length = 103

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + +  GNS   V+  +  L + G    + G+  +F +   +AV  FQ ++GL   G++
Sbjct: 30  TTKVIRKGNSGKEVKAAQIMLTLLGY---NVGIDSSFGSKTYNAVVSFQKKYGLSADGII 86

Query: 158 DSSTLEAMNV 167
             +T + +  
Sbjct: 87  GPATWDKLGR 96


>gi|218897774|ref|YP_002446185.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9842]
 gi|228908491|ref|ZP_04072332.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 200]
 gi|218545433|gb|ACK97827.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9842]
 gi|228851138|gb|EEM95951.1| Spore cortex-lytic enzyme [Bacillus thuringiensis IBL 200]
          Length = 253

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 8/148 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +  + T + +      +  +   N        ++    +    N+P           + L
Sbjct: 90  LAGAKTKQMLVK--ATKYDKSTANKGNSGSTAQKNKPSQNKGTNVPNG----YSQNDIQL 143

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPY 243
            +  + G    +  +    +  ++ N  
Sbjct: 144 MANAVYGESRGEPYLGQVAVAAVILNRV 171


>gi|126700003|ref|YP_001088900.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile 630]
 gi|115251440|emb|CAJ69273.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile]
          Length = 200

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + +  GNS   V+  +  L + G    + G+  +F +   +AV  FQ ++GL   G++
Sbjct: 127 TTKVIRKGNSGKEVKAAQIMLTLLGY---NVGIDSSFGSKTYNAVVSFQKKYGLSADGII 183

Query: 158 DSSTLEAMNV 167
             +T + +  
Sbjct: 184 GPATWDKLGR 193


>gi|13470669|ref|NP_102238.1| hypothetical protein mll0441 [Mesorhizobium loti MAFF303099]
 gi|14021411|dbj|BAB48024.1| mll0441 [Mesorhizobium loti MAFF303099]
          Length = 308

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G    SV  L   L   G       L   F    E+AV  FQ  HGL   G   
Sbjct: 181 DSVLTRGERGPSVAALVSNLAALGYYK--GKLDDVFGYGTEAAVLAFQRDHGLTADGYAG 238

Query: 159 S 159
            
Sbjct: 239 E 239


>gi|328553931|gb|AEB24423.1| bacteriophage SPbeta N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens TA208]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 7/73 (9%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L              G+  A+ A    AV+ FQ+ 
Sbjct: 304 SLPAGTFKVTSPLTRGEAVKQIQTALAALRYYPDKNAKNFGIDGAYGAKTAGAVRRFQLM 363

Query: 149 HGLDPSGMVDSST 161
           +GL   G+    T
Sbjct: 364 NGLKADGIYGPKT 376


>gi|116075275|ref|ZP_01472535.1| hypothetical protein RS9916_26984 [Synechococcus sp. RS9916]
 gi|116067472|gb|EAU73226.1| hypothetical protein RS9916_26984 [Synechococcus sp. RS9916]
          Length = 175

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 51/167 (30%)

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           ++ +  +  + +G+      V +G     TP    ++  +  NP +   +S         
Sbjct: 51  DLASRRISVIRDGQQLGLWPVAIGDPKTPTPAGVFKVENMRINPQYQSTKS--------- 101

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--Y 316
                                +V                     G    +    I F   
Sbjct: 102 --------------------GKVHPVT-----------------GPGGPLGHRWIGFLQQ 124

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTP 361
             N   +H TP P          ++GCVR+ N     L   +   TP
Sbjct: 125 GENQFGIHGTPWPHWVKIRA-AVSNGCVRMLNAHVQQLYDLVDVGTP 170


>gi|312115720|ref|YP_004013316.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220849|gb|ADP72217.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 192

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 47/149 (31%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L  VE+  V     + + + + +     S +++   NP W  P + ++++       
Sbjct: 63  DRRLYYVESKTVAYSYPIAIPKAEAK-WSGVSYVSQKRENPAWT-PTADMRRE------- 113

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNN 320
                                           P        G   N + +  +     ++
Sbjct: 114 -------------------------------NPKLPAYVPGGDPRNPLGTRALYL--GDS 140

Query: 321 TY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            Y +H T  P L        + GC+R+ N
Sbjct: 141 LYRIHGTDAPWLIGQ---QVSHGCIRMYN 166


>gi|265999695|ref|ZP_06111788.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|263095381|gb|EEZ18982.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
          Length = 165

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V++    L  V  G   LR  V +G+   + 
Sbjct: 4   PAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPGGEALRYGVGIGKAGFE- 62

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+                                   
Sbjct: 63  WQGRANVEYKKQWPRWTPPPEMIQR----------------------------------- 87

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
             PE   +   Q+PG  N + +  +  Y         +H +PE       +   +SGC+R
Sbjct: 88  -KPELEKYRNEQEPGPTNPLGARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIR 143

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 144 LMNQDIIDLYNRVQGKAP 161


>gi|240142398|ref|YP_002966908.1| hypothetical protein MexAM1_META2p0723 [Methylobacterium extorquens
           AM1]
 gi|240012342|gb|ACS43567.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 167

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           P        G  N + +  +  ++        +H T  P       R  +SGC+R+RN  
Sbjct: 94  PKLPALVPGGPGNPLGARALYLFADGGDTSYRIHGTNAPRSIG---REASSGCIRMRNAD 150


>gi|119512681|ref|ZP_01631754.1| hypothetical protein N9414_14468 [Nodularia spumigena CCY9414]
 gi|119462648|gb|EAW43612.1| hypothetical protein N9414_14468 [Nodularia spumigena CCY9414]
          Length = 188

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P LP   L  G+S  SV+ L+  L+ +G       +  AF    E+AVK FQ +  L   
Sbjct: 121 PALP--TLRFGSSGTSVRVLQRLLVSNGYAIR---VDGAFGPLTETAVKAFQNQRSLGVD 175

Query: 155 GMVDSSTLEAMNV 167
           G+V   T + + +
Sbjct: 176 GIVGPVTWQQLTI 188


>gi|326497859|dbj|BAJ94792.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518943|dbj|BAJ92632.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326528353|dbj|BAJ93358.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 369

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G+    + RL++ L   G L     S   S AFDA +E+AV  +Q   GL+ +G++D  T
Sbjct: 57  GDERDGLARLKDYLSHFGYLSEAPTSSPFSDAFDAELEAAVATYQRNFGLNATGVLDPPT 116

Query: 162 LEAMNVP 168
           +  M  P
Sbjct: 117 VSQMVAP 123


>gi|329930802|ref|ZP_08284207.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
 gi|328934661|gb|EGG31164.1| spore cortex-lytic enzyme [Paenibacillus sp. HGF5]
          Length = 219

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G+ +  V  L+ RL           L   + A  ++AV  FQ  +G+   G+ 
Sbjct: 32  AAPLLKPGSENGDVWDLQYRLKTLDFYTQ--PLDGKYGANTKAAVSRFQKEYGVPADGIT 89

Query: 158 DSSTLEAMNV 167
            + T   +  
Sbjct: 90  GAQTWRQLKK 99


>gi|229543982|ref|ZP_04433041.1| spore cortex-lytic enzyme [Bacillus coagulans 36D1]
 gi|229325121|gb|EEN90797.1| spore cortex-lytic enzyme [Bacillus coagulans 36D1]
          Length = 264

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 9/159 (5%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G       + +  G     V  L+ RL   G       +   F      A++ FQ  +G
Sbjct: 25  SGTARAFSNQVIQKGAVGDDVIELQARLQYIGYYK--GTIDGVFGYSTYWALRNFQKAYG 82

Query: 151 LDPSGMVDSST---LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           +   G+        L   +      ++ +  +  +       K          P  +   
Sbjct: 83  MPVDGLAGPGVKAKLVKASKYDAAYVKSMVASGKKFTYYGGTKKQAPKTAAKKPVQTATN 142

Query: 208 VENG----KVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           V NG     + L S  + G    +       +  ++ N 
Sbjct: 143 VPNGFSQNDIRLLSQAVYGEARGEPYEGQVAVAAVILNR 181


>gi|17988176|ref|NP_540810.1| hypothetical protein BMEI1893 [Brucella melitensis bv. 1 str. 16M]
 gi|17983936|gb|AAL53074.1| protein ybis precursor [Brucella melitensis bv. 1 str. 16M]
          Length = 203

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 8/178 (4%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
               + Y  V     +L A+   KV  +    +             ++      Y+V+P 
Sbjct: 25  TTPDVMYASVTEGPYALPAIPYEKVPKQFRRQIVPDPTGQAPGTIVVSLKDHFLYYVLPG 84

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
               +  + + +   ++    N+    +  +     E+    PE   +   Q+PG  N +
Sbjct: 85  GEALRYGVGIGKAGFEWQGRANVEYKKQWPRWTPPPEMIQRKPELEKYRNGQEPGPTNPL 144

Query: 309 ASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +  +  Y         +H +PE       +   +SGC+R+  ++IIDL   +    P
Sbjct: 145 GARALYIYQNGRDTGYRIHGSPEWWSIGQSM---SSGCIRLMNQDIIDLYNRVQGKAP 199


>gi|119491208|ref|ZP_01623305.1| hypothetical protein L8106_25370 [Lyngbya sp. PCC 8106]
 gi|119453549|gb|EAW34710.1| hypothetical protein L8106_25370 [Lyngbya sp. PCC 8106]
          Length = 176

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 18/138 (13%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S+  V+ L+++L   G      GL   F+  +E+ VK FQ   GL   G+V   
Sbjct: 2   VLKSGQSTHQVKNLQQQLERLGYSVGRLGLP--FNTQLENIVKAFQAEQGLPVDGVVGEI 59

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T         L+++Q    L  +    +  +     + N               L   VI
Sbjct: 60  T--------QLKLQQAIAELELLANSQKSPIPQPPQINNSGDFL------QGNWLEWRVI 105

Query: 221 VGRVD--RQTPILHSRIN 236
             +    R  P    +I+
Sbjct: 106 TTKKLNARSGPGFEYKID 123


>gi|256752603|ref|ZP_05493457.1| SpoIID/LytB domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748541|gb|EEU61591.1| SpoIID/LytB domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 487

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R +  G++   V+ L+  L   G       ++  +D    +AV  FQ  + L   G+  
Sbjct: 32  SRNMKKGDTGDDVKLLQTLLKEIGYYTKD--ITGTYDDNTLNAVMDFQKYYSLAVDGIAG 89

Query: 159 SSTLEAM 165
            +T+  +
Sbjct: 90  INTITKV 96


>gi|187779103|ref|ZP_02995576.1| hypothetical protein CLOSPO_02698 [Clostridium sporogenes ATCC
           15579]
 gi|187772728|gb|EDU36530.1| hypothetical protein CLOSPO_02698 [Clostridium sporogenes ATCC
           15579]
          Length = 308

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F    E+AVK  Q    L   G+V   T 
Sbjct: 241 KKGAKGGITKAIQKMLINIGYPVGSSGADGVFGDGTETAVKAVQKDCNLSVDGIVGKETW 300

Query: 163 EAM 165
           +A+
Sbjct: 301 KAL 303


>gi|170751970|ref|YP_001758230.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658492|gb|ACB27547.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 215

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 53/241 (21%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAY-VESAVKLF--QMRHGLDPSGMVDSSTLEAMNV 167
           V  L   L +S         + ++D +  ++A + +  Q ++G   +        + +  
Sbjct: 5   VTALAALLGVSVLAATPVLAASSYDPFGTDNADEYYSDQGQYGYQGTYAPGYG--QGVQA 62

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               +++ +     R             ++V+     L  V      +R  V VGR    
Sbjct: 63  APQAQVQPIP----REIVAFNGPYAPGTIVVSTAERRLYYVLGNGEAIRYGVGVGRPG-F 117

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           +    ++I      P W  P+++I +                                  
Sbjct: 118 SWSGTNKITAKREWPSWTPPKAMIARR--------------------------------- 144

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                 P+       G  N + +  +   S     +H + EP          +SGC+R+ 
Sbjct: 145 ------PDLPRYMAGGIENPLGARAMYIGSTE-YRIHGSNEPDTIGQ---AVSSGCIRMT 194

Query: 348 N 348
           N
Sbjct: 195 N 195


>gi|269960198|ref|ZP_06174573.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835005|gb|EEZ89089.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 541

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     ++  L + L  +  ++     S  +D  ++  V+LFQ   G+  
Sbjct: 453 WQAPLKDTLRLDMEGPAIDVLDQLLAQA--VNEQPLGSDIYDGALKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            G+    TL+ +   V +   QL+     
Sbjct: 511 DGIAGQRTLDRLQQSVQMDAPQLKQIDEE 539


>gi|330861295|emb|CBX71539.1| hypothetical protein YEW_CU11380 [Yersinia enterocolitica W22703]
          Length = 315

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETI 75
           YL    G+         S +   +     +I+N              + S  P   +   
Sbjct: 141 YLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVHEGTTAPYLASLAPQHPQ--Y 198

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
            +  +A+     +  R  WP++   P L  G  S  +  LRE L  +G L P     
Sbjct: 199 EKMHQALKEM--LADRRPWPQMANGPSLRPGQLSDDIPALREILDRTGMLHPVVSAP 253


>gi|239830989|ref|ZP_04679318.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823256|gb|EEQ94824.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 206

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 8/165 (4%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V      + A+ + K+  +    + +           ++      Y ++P     + 
Sbjct: 33  YSSVTDAGYVVPAIPSEKIQPQYRRQIVKYPTDEKPGTIIVDTREKFLYLIMPEGKAMRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGREGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            Y++       +H TPE       +   +SGC+R+  ++I+DL  
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMNQDIMDLYD 194


>gi|114763469|ref|ZP_01442876.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114544007|gb|EAU47018.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601]
          Length = 186

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 56/203 (27%), Gaps = 53/203 (26%)

Query: 160 STLEAMNVPVDLRIRQLQVN------LMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGK 212
           +TL    VP   R + +  N      +   +    + +G+  ++ +  + +L     +G 
Sbjct: 17  ATLALPLVPAQARAQAVIRNNISSFVMQDWRDHF-ETLGVSSIVADTTSRALHYWNADGS 75

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                   V + D  T   ++ I R    P W    S +  +                  
Sbjct: 76  DYRVYPTSVPKTDELTKRGYTEIVRKKVGPSWTPTASQL--ERFP--------------- 118

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
                         DW             PG  N + +  +         +H T +    
Sbjct: 119 --------------DWEPIG---------PGPDNPLGTHAMYLSWPAYI-IHGTHDTRKI 154

Query: 333 NNVVRFETSGCVRVRNIIDLDVW 355
               R  + GC+ + N   +   
Sbjct: 155 G---RRSSDGCIGLYN-EKIAEL 173


>gi|326202068|ref|ZP_08191938.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
 gi|325987863|gb|EGD48689.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
          Length = 236

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  ++ERL   G        S  ++  +++AV  FQ  H L     + +
Sbjct: 167 RNLKPGDRGADVLAVQERLKQLGYFHGY--ESGIYEDDLKNAVFQFQKDHNLKVKVSIST 224

Query: 160 STLEAMNVP 168
               AM   
Sbjct: 225 PDYNAMGYS 233



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 18/56 (32%), Gaps = 6/56 (10%)

Query: 308 MASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                +    R     +H T          R  + GC+R+ N  I +L   +   T
Sbjct: 98  FGGRWLGLNVRWGNYGIHGTKNEASIG---RSASHGCIRMYNRDIKELYDLVPLGT 150


>gi|205373543|ref|ZP_03226346.1| hypothetical protein Bcoam_09775 [Bacillus coahuilensis m4-4]
          Length = 164

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 50/155 (32%), Gaps = 13/155 (8%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRI---MFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           ++     V +  +    P ++  +  I   +  P      S   + ++          KD
Sbjct: 14  QISRDYRVPISSILSSNPQINPDMIIIGQRILIPSIPYSPSNPFRILINRQDHTLTLYKD 73

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P     I  + P       +  +     +   +H T  
Sbjct: 74  NTV----YKTYPIAVGKIASETPIGNYIIINKAPNPGGPFGAMWMSISKEH-YGIHGTNN 128

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           P          + GC+R+ N  +++L   +   T 
Sbjct: 129 PSSIGKN---VSLGCIRMYNKDVVELATIISIGTE 160


>gi|220927029|ref|YP_002502331.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219951636|gb|ACL62028.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 209

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 49/188 (26%), Gaps = 46/188 (24%)

Query: 163 EAMNVPVDLRIRQLQV--NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            A     +     +     ++R         G   ++V+     L  V  G   LR  + 
Sbjct: 46  SASAATPEAMDATVPKLSPILRETVAYNGPYGPGTIVVSTSERRLYYVLGGGQALRYGIG 105

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR    T      I      P W  P  ++++                           
Sbjct: 106 VGRPG-FTWGGMQSITMKREWPDWRPPSQMLRRR-------------------------- 138

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P+       G  N + +  +         +H + EP          +
Sbjct: 139 -------------PDLPRYMKGGPENPLGARAMYLG-GTLYRIHGSNEPETIGT---AVS 181

Query: 341 SGCVRVRN 348
           SGC+R+ N
Sbjct: 182 SGCIRMTN 189


>gi|331082131|ref|ZP_08331259.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405726|gb|EGG85256.1| hypothetical protein HMPREF0992_00183 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 163

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L  I+        +S    F    ++AVK FQ   GL  +
Sbjct: 79  PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 138

Query: 155 GMVDSSTLEAMN 166
           G++D ST   + 
Sbjct: 139 GIIDYSTWYEIQ 150


>gi|295314770|gb|ADF97535.1| PlyM10 [uncultured phage]
          Length = 282

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   FD   E+AVK FQ  +GL   G+  + +   
Sbjct: 220 GDTGAAVKTLQSELKQAGFL---LSVDGIFDKGTETAVKAFQRANGLAVDGVFGTGSQAK 276

Query: 165 MNV 167
           +N 
Sbjct: 277 LNA 279


>gi|284990257|ref|YP_003408811.1| peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284063502|gb|ADB74440.1| Peptidoglycan-binding domain 1 protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 224

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 32/66 (48%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG++  +V+RL+E L       P   +   F    ++ V+ FQ R GL   G+V  +
Sbjct: 158 VLRLGSTGDAVRRLQETLNRWYPSLPPLAVDGDFGPRTDARVRYFQGRAGLVADGIVGPA 217

Query: 161 TLEAMN 166
           T  A+ 
Sbjct: 218 TWRALG 223


>gi|288921194|ref|ZP_06415480.1| cell wall hydrolase/autolysin [Frankia sp. EUN1f]
 gi|288347401|gb|EFC81692.1| cell wall hydrolase/autolysin [Frankia sp. EUN1f]
          Length = 428

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 34/104 (32%), Gaps = 18/104 (17%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNS-----------SVSVQRLRERLIISGD 123
           +A    + +   G      +  +      LG+               V  L+ERL   G 
Sbjct: 100 RAFQQSRGLSVDGIIGPDTFRAIEEARRRLGDRLLYFSVTHPFVGDDVTALQERLSNMGF 159

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                     F A  + AV+ FQ   GLDP G+    TL  +  
Sbjct: 160 --DVGRADGIFGARTDVAVRDFQRNRGLDPDGLCGPRTLRELKR 201



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +  FD  +++AV+ FQ   GL   G++   T  A+ 
Sbjct: 87  TADLFDRELDNAVRAFQQSRGLSVDGIIGPDTFRAIE 123


>gi|229018065|ref|ZP_04174940.1| Spore cortex-lytic enzyme [Bacillus cereus AH1273]
 gi|229024246|ref|ZP_04180705.1| Spore cortex-lytic enzyme [Bacillus cereus AH1272]
 gi|228737021|gb|EEL87557.1| Spore cortex-lytic enzyme [Bacillus cereus AH1272]
 gi|228743156|gb|EEL93281.1| Spore cortex-lytic enzyme [Bacillus cereus AH1273]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQKGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQSKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|261420721|ref|YP_003254403.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
 gi|319768391|ref|YP_004133892.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
 gi|261377178|gb|ACX79921.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC61]
 gi|317113257|gb|ADU95749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y412MC52]
          Length = 165

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 11/91 (12%)

Query: 278 GKEVFVEEVDW----NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           G+ +    +       +    +F+   + P       +  +     +   +H T +P   
Sbjct: 74  GRTIRTYPIGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKLH-YGIHGTNDPSSI 132

Query: 333 NNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                + + GC+R+ N  +++L   +   T 
Sbjct: 133 GK---YVSKGCIRMHNKDVLELASIVPNGTE 160


>gi|148238943|ref|YP_001224330.1| hypothetical protein SynWH7803_0607 [Synechococcus sp. WH 7803]
 gi|147847482|emb|CAK23033.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 169

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 41/164 (25%), Gaps = 51/164 (31%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              +  + NG+      V +G     TP    ++     NP +   +S            
Sbjct: 48  QRRISVIRNGERIGPWPVAIGDPKTPTPTGVFQVENKRVNPQYQSTKS------------ 95

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRN 319
                              V                     G  + +    I F     N
Sbjct: 96  -----------------GRVHPVT-----------------GPSSPLGHRWIGFLQQGPN 121

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTP 361
              +H TP P          ++GCVR+ N     L   +   TP
Sbjct: 122 QFGIHGTPWPHWVKIRA-AVSNGCVRMLNAHVQKLYELVDVGTP 164


>gi|295704030|ref|YP_003597105.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294801689|gb|ADF38755.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           DSM 319]
          Length = 188

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+ S  V+ L++ L    D+  +  +   F    ++ VK FQ  H L P G+V   
Sbjct: 48  TLRKGSHSSYVRDLQQSLK---DVKYNTSVDGIFGTQTQNVVKEFQTDHSLSPDGIVGPL 104

Query: 161 TLEAMNVPVDLRIR 174
           T  A++     R +
Sbjct: 105 TWAALDENKVERKQ 118


>gi|229587283|ref|YP_002860321.1| LycA [Clostridium botulinum Ba4 str. 657]
 gi|229260176|gb|ACQ51213.1| LycA [Clostridium botulinum Ba4 str. 657]
          Length = 318

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T 
Sbjct: 251 KQGARGGITKVIQQMLINIGYPVGSYGADGVFGDGTVTAIKAFQRDCHLVADGIVGKETW 310

Query: 163 EAM 165
           +A+
Sbjct: 311 KAL 313


>gi|160933190|ref|ZP_02080579.1| hypothetical protein CLOLEP_02035 [Clostridium leptum DSM 753]
 gi|156868264|gb|EDO61636.1| hypothetical protein CLOLEP_02035 [Clostridium leptum DSM 753]
          Length = 439

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      + LG++  +V +L++RL+  G        +  FD   E  V  FQ    +   
Sbjct: 357 PFPKGTTMKLGDTGDNVTKLQQRLLELGH--TYSEPTGTFDELTEQGVMNFQFLSDMVAD 414

Query: 155 GMVDSSTLEAMNVPVDLR 172
           G+ D + L+A+  P  ++
Sbjct: 415 GIADDALLDALYAPDAVK 432


>gi|39936673|ref|NP_948949.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|39650529|emb|CAE29052.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
          Length = 294

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 58/192 (30%), Gaps = 48/192 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   +  QL  NL R +     K     ++V+     L  V      +R  V VGR D
Sbjct: 88  EQPDADQTVQLPPNLRRQEVDFATKEPAGTIVVDTANTHLYYVLGNGRAIRYGVRVGR-D 146

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +I+R    P W  P  +I++                                
Sbjct: 147 GFTWNGVQKISRKAEWPDWHPPAEMIERQ------------------------------- 175

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 176 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 222

Query: 345 RV--RNIIDLDV 354
            +   ++ DL  
Sbjct: 223 GMLNDDVSDLFE 234


>gi|256005192|ref|ZP_05430160.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|255990846|gb|EEU00960.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 2360]
 gi|316941590|gb|ADU75624.1| spore cortex-lytic enzyme [Clostridium thermocellum DSM 1313]
          Length = 234

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++ +L I      +  +   +      AV+ FQ ++GL   G+    TL A
Sbjct: 43  GSTGQEVKNIQYKLAIWKYY--NGKIDGIYGYKTYMAVRKFQAKNGLKVDGIAGPETLAA 100

Query: 165 MNVPVDLRIR 174
           + +P     +
Sbjct: 101 LGLPTGQAAK 110


>gi|125974454|ref|YP_001038364.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|281418980|ref|ZP_06249998.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
 gi|125714679|gb|ABN53171.1| cell wall hydrolase, SleB [Clostridium thermocellum ATCC 27405]
 gi|281407437|gb|EFB37697.1| spore cortex-lytic enzyme [Clostridium thermocellum JW20]
          Length = 234

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++ +L I      +  +   +      AV+ FQ ++GL   G+    TL A
Sbjct: 43  GSTGQEVKNIQYKLAIWKYY--NGKIDGIYGYKTYMAVRKFQAKNGLKVDGIAGPETLAA 100

Query: 165 MNVPVDLRIR 174
           + +P     +
Sbjct: 101 LGLPTGQAAK 110


>gi|115522891|ref|YP_779802.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115516838|gb|ABJ04822.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 266

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 44/190 (23%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
              +      +D   + +     +     +       ++++ P   L  V+     LR  
Sbjct: 102 QQAIREPEDQLDPAQQPIDPRFEKQLVAYQGNESPGTIVIDTPNKFLFLVQGDGKALRYG 161

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V VGR    T      I+     P W  P  ++ +                         
Sbjct: 162 VGVGRPG-FTWSGVKHISAKKEWPAWTPPPEMLARR------------------------ 196

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                          P+     + G  N + +  +   S     +H + EP         
Sbjct: 197 ---------------PDLPRHMEGGPQNPLGARAMYLGSS-LYRIHGSNEPWTIGTN--- 237

Query: 339 ETSGCVRVRN 348
            +SGC+R+RN
Sbjct: 238 VSSGCIRMRN 247


>gi|332710365|ref|ZP_08430313.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
 gi|332350914|gb|EGJ30506.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
          Length = 152

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + +  L  GN+  +V+ L++ LI  G        +  FD Y    V  FQ  + L   G
Sbjct: 75  TVTMPVLTPGNNGDAVRFLQQILISLGY--TIVKFNANFDRYTYLGVTQFQRNNRLKVDG 132

Query: 156 MVDSSTLEAMNVPVDLRIR 174
           +V   T   +      R R
Sbjct: 133 VVGWHTWRKLGEASVSRRR 151


>gi|307152104|ref|YP_003887488.1| hypothetical protein Cyan7822_2234 [Cyanothece sp. PCC 7822]
 gi|306982332|gb|ADN14213.1| protein of unknown function DUF187 [Cyanothece sp. PCC 7822]
          Length = 423

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     VQ ++  L   G       L+  F    ++AV  FQ  +GL   G+V   T   
Sbjct: 359 GMRGDDVQEIQRLLQNRGFY--RGKLNGNFGFRTKAAVTAFQKANGLKNDGIVGPLTYRQ 416

Query: 165 MNVP 168
           +   
Sbjct: 417 LKFS 420


>gi|269127230|ref|YP_003300600.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
 gi|268312188|gb|ACY98562.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
          Length = 243

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 6/99 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+ RL   G       +   +    + AV  FQ  + +  S  V      A
Sbjct: 58  GARGEHVKALQRRLKELGYAP--GPIDGRYGNLTQMAVWAFQKVNRIKVSDTVGERMWAA 115

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           +  P   R    +    R+       +  +Y++V     
Sbjct: 116 LENPKAPRPVSKRREPERVDV----DLRRQYLVVYKAGR 150


>gi|227821416|ref|YP_002825386.1| hypothetical protein NGR_c08420 [Sinorhizobium fredii NGR234]
 gi|227340415|gb|ACP24633.1| hypothetical protein NGR_c08420 [Sinorhizobium fredii NGR234]
          Length = 306

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 45/208 (21%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
                EA  +P    I  +    +R +           ++++ P+  L  V++G + LR 
Sbjct: 101 GPHPDEAFPLPATD-ISTVDPRFLRQQVPYVTHEPPGTIVIDTPSRHLYLVQDGGMALRY 159

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VG+   +     +RI R    P W+    ++ ++                       
Sbjct: 160 GIGVGKAGLE-FAGEARIGRKALWPRWIPTSEMVAREP---------------------- 196

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNN 334
                                  DPG  N +    +  Y   ++  + +H T E      
Sbjct: 197 -------------ERYGPLASGLDPGLTNPLGPRALYLYQDGKDTLFRIHGTTEAWSIGK 243

Query: 335 VVRFETSGCVRVRNII--DLDVWLLKDT 360
                +SGC+R+ N    DL   + + T
Sbjct: 244 ---AVSSGCIRMFNPDVIDLYNRVPEGT 268


>gi|170749159|ref|YP_001755419.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170655681|gb|ACB24736.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 192

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 50/174 (28%), Gaps = 47/174 (27%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +     +     ++V      L  V      +R  V VG          +RI+R  
Sbjct: 46  FARYEIAAPTREAPGTIVVETKERQLYLVLPNGRAMRYGVSVGDEA-YGWTGTARIDRKA 104

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  +I++                                  W           
Sbjct: 105 EWPAWNPPAEMIKR----------------------------------WPHVHA------ 124

Query: 300 QDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
              G +N + +  +    R  +  Y +H T EP          +SGC+R+RNI 
Sbjct: 125 MQGGPMNPLGARALYLSDRGRDTLYRIHGTNEPEKIGQ---AVSSGCIRMRNID 175


>gi|323139261|ref|ZP_08074315.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322395482|gb|EFX98029.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 206

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 47/182 (25%), Gaps = 46/182 (25%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                   L     R             ++V+     L  V+     +R  + VGR   Q
Sbjct: 46  TPTPEEENLSGPYERQVVFFRTTEAPGTIVVHTAERYLYLVQGNNRAIRYGIGVGRDGFQ 105

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
                 +I+R    P W  P  +IQ+                                  
Sbjct: 106 -WAGMHKISRKQEWPDWRPPPEMIQRQ--------------------------------- 131

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                 P        G  N M +  +        Y +H T +P    +     +SGC R+
Sbjct: 132 ------PYLPRFMAGGPGNPMGARALYI--GTTIYRIHGTNQPQTIGH---AVSSGCFRL 180

Query: 347 RN 348
            N
Sbjct: 181 VN 182


>gi|239827527|ref|YP_002950151.1| spore cortex-lytic enzyme [Geobacillus sp. WCH70]
 gi|239807820|gb|ACS24885.1| spore cortex-lytic enzyme [Geobacillus sp. WCH70]
          Length = 270

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G     V  L+ RL   G    +  +   F      AV+ FQ  +GL   
Sbjct: 29  KAFSNQVIQRGAVGDDVIELQARLQYIGFY--NGKIDGVFGWNTYWAVRNFQYEYGLPVD 86

Query: 155 GMVDSSTLEAMNV 167
           G+V  ST   +  
Sbjct: 87  GLVGESTKAKLVK 99


>gi|291299342|ref|YP_003510620.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568562|gb|ADD41527.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 323

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LGN       ++  L  +G        + AFDA  ESAVK FQ   GLD  G+V   T E
Sbjct: 41  LGNRGADTLSVQHLLAQAG---HQVEATGAFDAATESAVKKFQESKGLDADGIVGPKTWE 97

Query: 164 AMNVPVD 170
           A+   ++
Sbjct: 98  ALAPNLE 104



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+    W  L    L  G S  +V+ L+ +L     L     ++  FD  +   V+ FQ
Sbjct: 89  GIVGPKTWEAL-APNLETGASGEAVKALQVQLNAKQRLSLE--VNGTFDDALAGEVRKFQ 145

Query: 147 MRHGLDPSGMVDSSTLE 163
               +  +G V+  T  
Sbjct: 146 EHAKISATGAVNVETWR 162


>gi|291299343|ref|YP_003510621.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568563|gb|ADD41528.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 379

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 10/142 (7%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        +  +   + +  F           D  +    +    QT+  +      +
Sbjct: 242 DLATGSKGSEVRAAQCLLADAGFPTGDKPSGSFDDKTVTATKE---FQTKVGLEA-SGKV 297

Query: 90  SRGGWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            +  W  L        L  G+S   V R++  L  +  L         F    + AV  +
Sbjct: 298 DKHTWTALLSMGETPELKEGSSGADVSRVQRALTAA--LGAEVSQDGQFGPKTKQAVTDY 355

Query: 146 QMRHGLDPSGMVDSSTLEAMNV 167
           Q   G++ +G+V++ T +A+  
Sbjct: 356 QTAAGVEANGVVNAETWKALQA 377


>gi|227821290|ref|YP_002825260.1| hypothetical protein NGR_c07140 [Sinorhizobium fredii NGR234]
 gi|227340289|gb|ACP24507.1| hypothetical protein NGR_c07140 [Sinorhizobium fredii NGR234]
          Length = 253

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 62/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  RQ+     R +           ++V+     L  + +G    R  V +GR     
Sbjct: 89  PAVPYRQIDPRFYRQEVSDPFGEAPGTIVVDTADRYLYLIGSGGSATRYGVGLGREGFA- 147

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P S+I +    +L +   Y  DN                   
Sbjct: 148 WSGRGVIQWKQKWPKWTPPDSMIARQ--PVLAK---YSADNGGM---------------- 186

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + S  +  F +  +    +H TPE           +SGCVR
Sbjct: 187 ------------PPGLDNPLGSRALYIFQNGQDTLYRVHGTPEWQSIGK---AVSSGCVR 231

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +    P
Sbjct: 232 MINQDVIDLYARVRGKAP 249


>gi|254707169|ref|ZP_05168997.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis M163/99/10]
 gi|254709288|ref|ZP_05171099.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis B2/94]
 gi|256030811|ref|ZP_05444425.1| ErfK/YbiS/YcfS/YnhG [Brucella pinnipedialis M292/94/1]
 gi|256158836|ref|ZP_05456693.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M490/95/1]
 gi|256254217|ref|ZP_05459753.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti B1/94]
 gi|260169715|ref|ZP_05756526.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|261221367|ref|ZP_05935648.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261314645|ref|ZP_05953842.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316797|ref|ZP_05955994.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261759254|ref|ZP_06002963.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|265987867|ref|ZP_06100424.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265997327|ref|ZP_06109884.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|260919951|gb|EEX86604.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261296020|gb|EEX99516.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261303671|gb|EEY07168.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261739238|gb|EEY27234.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|262551795|gb|EEZ07785.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|264660064|gb|EEZ30325.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
          Length = 206

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E              PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSATIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|225626679|ref|ZP_03784718.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225618336|gb|EEH15379.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
          Length = 210

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 37  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 96

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E              PE   +    DPG  N + +  + 
Sbjct: 97  GIGVGRRGFEWSGTARVAMKREWPTWTPPSATIKRQPELAKYRNGMDPGLRNPLGARALY 156

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 157 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 190


>gi|190890519|ref|YP_001977061.1| hypothetical protein RHECIAT_CH0000898 [Rhizobium etli CIAT 652]
 gi|190695798|gb|ACE89883.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 42/194 (21%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D++   A  V V    + ++    R K  L        V+++     L  VE      R 
Sbjct: 30  DNAQRPAQIVRVAQMPKYVKPQFKRKKVRLMTTEAAGTVIIDTNNKYLYLVEGNNRATRY 89

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR D        +I R    P W  P  + +++                       
Sbjct: 90  GIGVGR-DGFGWSGIVKIGRKAEWPAWTPPAEMRRRE----------------------- 125

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNN 334
                       + +       Q+ G+ N + +  +      R+  + +H T +P     
Sbjct: 126 ------------AAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGL 173

Query: 335 VVRFETSGCVRVRN 348
            +   +SGC+R+ N
Sbjct: 174 NM---SSGCIRMMN 184


>gi|303241300|ref|ZP_07327805.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
 gi|302591139|gb|EFL60882.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
          Length = 1528

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 16/130 (12%)

Query: 110  SVQRLRERLIISGDLDPSKGLSV-------AFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             V  L++ L+  G L+     +         +    E+AVK FQ ++GLD  G V   T 
Sbjct: 1007 DVIVLQKILVSLGLLEMPIDPNTKTYVPFGTYAGLTENAVKKFQKKNGLDQDGKVGKITW 1066

Query: 163  EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
              + +P D    Q   N           +        IP  +L     G     + + VG
Sbjct: 1067 NKLMLPWDENSAQPDRN----SWSYIYILQNDRFYTAIPQVTLSTPTKG-----TKIKVG 1117

Query: 223  RVDRQTPILH 232
               R T    
Sbjct: 1118 EPLRITANGT 1127


>gi|265999208|ref|ZP_05465370.2| protein YBIS [Brucella melitensis bv. 2 str. 63/9]
 gi|263092660|gb|EEZ16881.1| protein YBIS [Brucella melitensis bv. 2 str. 63/9]
          Length = 277

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 146 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 203

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 204 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 229

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H   +P      +   +SGC+R+RN
Sbjct: 230 G-STLYRIHGANQPWTIGKAM---SSGCIRMRN 258


>gi|225686039|ref|YP_002734011.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|225642144|gb|ACO02057.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
          Length = 244

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 40/153 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H   +P      +   +SGC+R+RN
Sbjct: 197 G-STLYRIHGANQPWTIGKAM---SSGCIRMRN 225


>gi|299134597|ref|ZP_07027789.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298590407|gb|EFI50610.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 378

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 48/207 (23%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           +  + L A + P     ++L   L R +   + K     ++V+     L  +      +R
Sbjct: 152 MTVAVLPAEDQPETGPRQELSPRLRRQEVNYQTKEPAGTIIVDTANTQLYYILGHGRAIR 211

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             V VGR D  T     +I R    P W  P  +I++                       
Sbjct: 212 YGVRVGR-DGFTWTGVQKITRKAEWPDWHPPPEMIERQ---------------------- 248

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNV 335
                            P        G  N + +  +   +    Y +H T +P      
Sbjct: 249 -----------------PYLPRFMAGGDGNPLGARAMYLGN--TVYRIHGTNQPSTIGK- 288

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDT 360
             F +SGC+ +   ++ DL   +   T
Sbjct: 289 --FVSSGCIGMLNEDVEDLFDRVKVGT 313


>gi|187777208|ref|ZP_02993681.1| hypothetical protein CLOSPO_00754 [Clostridium sporogenes ATCC
           15579]
 gi|187774136|gb|EDU37938.1| hypothetical protein CLOSPO_00754 [Clostridium sporogenes ATCC
           15579]
          Length = 232

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    + +++ +L   G    + G+   F     +AV+ FQ ++GL   G++   TL A
Sbjct: 43  GHRGDIISQVQRKLKAWGYY--NGGVDGIFGHGTYTAVRSFQSKNGLTVDGIIGDKTLVA 100

Query: 165 MNVP 168
           + + 
Sbjct: 101 LGIN 104


>gi|88808650|ref|ZP_01124160.1| hypothetical protein WH7805_03132 [Synechococcus sp. WH 7805]
 gi|88787638|gb|EAR18795.1| hypothetical protein WH7805_03132 [Synechococcus sp. WH 7805]
          Length = 157

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 48/164 (29%), Gaps = 52/164 (31%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             Q    + + +++    L   +NGKV  R  V +G  +  TP     I           
Sbjct: 23  PMQARAEKTIEISLKQRYLTLFDNGKVVERFPVAIGAPESPTPAGSYAIT---------- 72

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                +K+                  +  + GK +                    PG  N
Sbjct: 73  -----RKEEAP---------------VYHKGGKVI-------------------APGPKN 93

Query: 307 AMASTKI-EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            +    +  F   +  Y +H T  P     +    + GC+R+ N
Sbjct: 94  PVGVRYMAYFQIGSGEYAIHGTAWPNWV-KLRAAVSLGCIRMLN 136


>gi|319645390|ref|ZP_07999622.1| CtpA protein [Bacillus sp. BT1B_CT2]
 gi|317392276|gb|EFV73071.1| CtpA protein [Bacillus sp. BT1B_CT2]
          Length = 465

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 3/76 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++   V+  ++ L   G    + G    FDA  E+AVK FQ    L  +G++
Sbjct: 375 SKKEYKAGSTGDEVKAAQQMLQALGYKLNATGA---FDAQTEAAVKAFQKDQKLKTTGIL 431

Query: 158 DSSTLEAMNVPVDLRI 173
              T  ++   +  ++
Sbjct: 432 TGETTISLTSKLQDKL 447


>gi|217077446|ref|YP_002335164.1| ErfK/YbiS/YcfS/YnhG family [Thermosipho africanus TCF52B]
 gi|217037301|gb|ACJ75823.1| ErfK/YbiS/YcfS/YnhG family [Thermosipho africanus TCF52B]
          Length = 379

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 11/121 (9%)

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T      +  I+ N             ++ +              +     K++      
Sbjct: 220 TVQFTEGLTSIVVNLSTSRLAVYYAGKLVKVFPVAIGRSDSMPPGIYWILNKQIDPALY- 278

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           W     P          IN + +  ++  +     +H T +P       R  + GCVR+ 
Sbjct: 279 WYGEYIPPR------SPINGLGTRFLQLSNP-TYGIHGTTKPWEIG---RRISHGCVRMF 328

Query: 348 N 348
           N
Sbjct: 329 N 329


>gi|194015260|ref|ZP_03053876.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194012664|gb|EDW22230.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 279

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQ-MRHG 150
            +P   +  G    +V +L+  L            + G+   +     +AVK FQ  + G
Sbjct: 194 AVPTGVIRQGARGTAVTQLQNALAAVYFYPDKGAKNNGIDGIYGPKTANAVKRFQSTQAG 253

Query: 151 LDPSGMVDSSTLEAMNV 167
           +   G+  S+T   +  
Sbjct: 254 IANDGIYGSATRAKLVA 270


>gi|52080651|ref|YP_079442.1| carboxy-terminal processing protease [Bacillus licheniformis ATCC
           14580]
 gi|52786025|ref|YP_091854.1| CtpA [Bacillus licheniformis ATCC 14580]
 gi|52003862|gb|AAU23804.1| carboxy-terminal processing protease [Bacillus licheniformis ATCC
           14580]
 gi|52348527|gb|AAU41161.1| CtpA [Bacillus licheniformis ATCC 14580]
          Length = 465

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 3/76 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++   V+  ++ L   G    + G    FDA  E+AVK FQ    L  +G++
Sbjct: 375 SKKEYKAGSTGDEVKAAQQMLQALGYKLNATGA---FDAQTEAAVKAFQKDQKLKTTGIL 431

Query: 158 DSSTLEAMNVPVDLRI 173
              T  ++   +  ++
Sbjct: 432 TGETTISLTSKLQDKL 447


>gi|261211540|ref|ZP_05925828.1| general secretion pathway protein A/general secretion pathway
           protein B [Vibrio sp. RC341]
 gi|260839495|gb|EEX66121.1| general secretion pathway protein A/general secretion pathway
           protein B [Vibrio sp. RC341]
          Length = 783

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 2/95 (2%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +      + +           W     R L  G     V  L  +L     L   +  + 
Sbjct: 424 QRYRIARQWLEPLWRGQYALLWQGGFSRTLKQGMRGDDVALLESKLAQV--LGEPERSTD 481

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            FD  +   V+LFQ    +   G+    TL     
Sbjct: 482 LFDKDISRKVELFQRWQSMHVDGIAGKQTLRRFRT 516


>gi|170742571|ref|YP_001771226.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168196845|gb|ACA18792.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 48/167 (28%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R     + +     V+V+     L  V    + +R  V VGR    T      I      
Sbjct: 72  RELVPFDGRYAPGTVVVSTAERRLYYVLGDGMAIRYGVGVGRPG-FTWSGTKTIVAKKEW 130

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P     K+M+A     P+Y+                                   
Sbjct: 131 PSWTPP-----KEMLARRPDLPRYMA---------------------------------- 151

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 152 GGIDNPLGARAMYIG-GTLYRIHGSNEPDTIGQ---AVSSGCIRMTN 194


>gi|297531502|ref|YP_003672777.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
 gi|297254754|gb|ADI28200.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. C56-T3]
          Length = 165

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 11/91 (12%)

Query: 278 GKEVFVEEVDW----NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           G+ +    +       +    +F+   + P       +  +     +   +H T +P   
Sbjct: 74  GRTIRTYPIGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKIH-YGIHGTNDPSSI 132

Query: 333 NNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                + + GC+R+ N  +++L   +   T 
Sbjct: 133 GK---YVSKGCIRMHNKDVLELASIVPNGTE 160


>gi|182436235|ref|YP_001823954.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326776864|ref|ZP_08236129.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464751|dbj|BAG19271.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326657197|gb|EGE42043.1| Zinc D-Ala-D-Ala carboxypeptidase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 260

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G+S  +V++L+ R  ++G         +  AF    ++AV+ FQ  +GL   G+
Sbjct: 54  SGTLQEGSSGEAVRQLQIR--VAGYPGTGNQIAIDGAFGPATKAAVQRFQAAYGLAADGI 111

Query: 157 VDSSTLEAM 165
             + T   +
Sbjct: 112 AGAQTFNKI 120


>gi|209548062|ref|YP_002279979.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533818|gb|ACI53753.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 42/148 (28%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  +E      R  + VGR D        +I R    P W  P  + +++         
Sbjct: 76  YLYLIEGNNRATRYGIGVGR-DGFGWSGVVKIGRKAEWPAWTPPAEMRRRE--------- 125

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNT 321
                                     + +       Q+ G+ N + +  +      R+  
Sbjct: 126 --------------------------AAKGHIIPAFQEGGEDNPLGARAMYLYQGGRDTI 159

Query: 322 Y-MHDTPEPILFNNVVRFETSGCVRVRN 348
           + +H T +P      +   +SGC+R+ N
Sbjct: 160 FRIHGTNQPWTIGLNM---SSGCIRMMN 184


>gi|153868406|ref|ZP_01998357.1| hypothetical protein BGS_0497 [Beggiatoa sp. SS]
 gi|152144274|gb|EDN71643.1| hypothetical protein BGS_0497 [Beggiatoa sp. SS]
          Length = 147

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERL-IISGDLD 125
            +S +T     +AI  Y        W  P LP+  L +G S+ SV  +R+ L  I G   
Sbjct: 35  ALSGQTFEFPIEAINEYWLGQFLVLWQPPTLPVPVLQVGISNESVIWIRKLLDEIEGLRG 94

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               LS  FD  +   V  FQ +  LDP G+V   TL A+  
Sbjct: 95  EPHTLSPLFDYALRRRVIAFQRQQKLDPDGIVGEQTLLALQA 136


>gi|329121069|ref|ZP_08249700.1| cell wall hydrolase [Dialister micraerophilus DSM 19965]
 gi|327471231|gb|EGF16685.1| cell wall hydrolase [Dialister micraerophilus DSM 19965]
          Length = 248

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G  ++      +GNS   V+ ++ +L+  G       +   +    E+AV++FQ R  L 
Sbjct: 17  GTGDIGNSAYKIGNSGEIVKLIQRKLVKQG---IKIEIDGKYGKDTENAVRIFQKRKKLK 73

Query: 153 PSGMVDSSTLEAM 165
             G++   T  A+
Sbjct: 74  VDGIIGEETYFAL 86


>gi|304315730|ref|YP_003850875.1| spore cortex-lytic enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777232|gb|ADL67791.1| spore cortex-lytic enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GNS   V R++ RL   G  D    +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNSGSDVSRVQSRLKDWGYYD--GPVDGFFGVRTWLAVRKFQANNGLNVTGIVDDETKVA 99

Query: 165 MNVPVDLRIRQ 175
           +          
Sbjct: 100 LGFNTSTSAAI 110


>gi|153953613|ref|YP_001394378.1| gamma-D-glutamyl-L-diamino acid endopeptidase [Clostridium kluyveri
           DSM 555]
 gi|219854235|ref|YP_002471357.1| hypothetical protein CKR_0892 [Clostridium kluyveri NBRC 12016]
 gi|146346494|gb|EDK33030.1| Predicted gamma-D-glutamyl-L-diamino acid endopeptidase
           [Clostridium kluyveri DSM 555]
 gi|219567959|dbj|BAH05943.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 423

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             LG+    V  ++  L   G       +   +    + AV++FQ  HGL   G++  +T
Sbjct: 4   FKLGSRGTEVMHIQATLKKIGY--NPGVIDGIYGTDTKKAVEIFQRNHGLIVDGIIGPNT 61

Query: 162 LE 163
             
Sbjct: 62  YR 63


>gi|15965817|ref|NP_386170.1| hypothetical protein SMc04338 [Sinorhizobium meliloti 1021]
 gi|307315650|ref|ZP_07595182.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307318885|ref|ZP_07598317.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|15075086|emb|CAC46643.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306895606|gb|EFN26360.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306898675|gb|EFN29339.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 232

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 59/207 (28%), Gaps = 49/207 (23%)

Query: 151 LDPSGMVDSSTLEAMNVPVDL------RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           L  + + DS T + +N           R  Q+     R             ++++     
Sbjct: 37  LAQTQIYDSKTKKWVNYDKRKARQYFARNNQVPEAFRRQMVPFRTAEVPGTIIIDGNQHF 96

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V+ G   +R  + VGR          R+ R    P W  P  ++ +           
Sbjct: 97  LYLVQPGGQAIRYGIGVGREG-FGWAGIVRVGRTAEWPTWTPPPEMVAR----------- 144

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN--TY 322
                                  W              G  N + +  +  Y  +N   Y
Sbjct: 145 -----------------DPNAAKWAGG--------MPGGPDNPLGARALYLYEGDNDTIY 179

Query: 323 -MHDTPEPILFNNVVRFETSGCVRVRN 348
            +H T EP          +SGC+R+ N
Sbjct: 180 RIHGTVEPWTIG---LDVSSGCIRMNN 203


>gi|326778411|ref|ZP_08237676.1| Peptidase M23 [Streptomyces cf. griseus XylebKG-1]
 gi|326658744|gb|EGE43590.1| Peptidase M23 [Streptomyces cf. griseus XylebKG-1]
          Length = 340

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGW  +       G S  +V  ++  +   G       +  ++ +    AVK F
Sbjct: 203 RGVDLSGGWSRID-----PGASGATVVVIQHLMNQRG---HGLAVDGSYGSLSVGAVKRF 254

Query: 146 QMRHGLDPSGMVDSSTL 162
           Q   GL   G V  +T 
Sbjct: 255 QRSAGLAADGQVGPATW 271



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 9/92 (9%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           K       + + G      WP L    L  G S   V+ L+  L   G       +   F
Sbjct: 252 KRFQRSAGLAADGQVGPATWPVLVY-TLRQGASGSPVRALQTALNRRG---ARLAVDGGF 307

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   SAV+ +Q  + L   G     T  A+ 
Sbjct: 308 GSVTTSAVRAYQSGNRLVTDGEAGPVTWRALT 339


>gi|296141898|ref|YP_003649141.1| cell wall hydrolase/autolysin [Tsukamurella paurometabola DSM
           20162]
 gi|296030032|gb|ADG80802.1| cell wall hydrolase/autolysin [Tsukamurella paurometabola DSM
           20162]
          Length = 395

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 11/78 (14%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSV-----------AFDAYVESAVKLFQMRHG 150
           + LG+   +V  +R  L   G L                    FD  ++ A + FQ + G
Sbjct: 4   ISLGDHGGAVAEIRGILADQGFLPDYVAPRELVSNGWTLPEAVFDRRLDHATRAFQQQRG 63

Query: 151 LDPSGMVDSSTLEAMNVP 168
           L   G+V  +T  A+   
Sbjct: 64  LLVDGVVGPATYRALRES 81



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 21/155 (13%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDS--DIP-IISKETIAQTEKAIAFYQD 87
           I        + E    + +  F          + +   +P  +    +    +A    + 
Sbjct: 4   ISLGDHGGAVAEIRGILADQGFLPDYVAPRELVSNGWTLPEAVFDRRLDHATRAFQQQRG 63

Query: 88  ILSRGGWPELPIRPLH-----LGN-----------SSVSVQRLRERLIISGDLDPSKGLS 131
           +L  G       R L      LG            S   V  L+ RL   G       + 
Sbjct: 64  LLVDGVVGPATYRALRESTYQLGARTLSYIASAPPSGDDVAALQARLQNLGFYA--GMID 121

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             F       +  +Q   GL   G+   +TL ++ 
Sbjct: 122 GLFGPQTHLGLSAYQREFGLVADGICGPATLRSLT 156


>gi|299132267|ref|ZP_07025462.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298592404|gb|EFI52604.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 257

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 43/153 (28%), Gaps = 46/153 (30%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  V  G   +R  V VGR    T      I+R    P W  P  +I +          
Sbjct: 101 YLYLVLGGNRAIRYGVGVGREG-FTWSGVQTISRKAEWPDWHPPAQMIARQ--------- 150

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
                                         P        G  N + +  +     +   +
Sbjct: 151 ------------------------------PYLPRFVAGGPGNPLGARAMYLGHSD-YRI 179

Query: 324 HDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
           H T +P        F +SGC+R+ N  + DL  
Sbjct: 180 HGTNDPTTIGK---FVSSGCIRLTNTDVEDLFN 209


>gi|303238375|ref|ZP_07324910.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
 gi|302594079|gb|EFL63792.1| spore cortex-lytic enzyme [Acetivibrio cellulolyticus CD2]
          Length = 234

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++ +L   G  D    +   +     +AV+ FQ ++GL   G+    TL A
Sbjct: 43  GSTGQEVKNIQYKLSNWGYYD--GAIDGEYGYKTYTAVRSFQYKNGLTVDGVAGPETLSA 100

Query: 165 MNVP 168
           + + 
Sbjct: 101 LGLS 104


>gi|229045449|ref|ZP_04192106.1| Spore cortex-lytic enzyme [Bacillus cereus AH676]
 gi|296503296|ref|YP_003664996.1| cell wall hydrolase CwlJ [Bacillus thuringiensis BMB171]
 gi|228724891|gb|EEL76191.1| Spore cortex-lytic enzyme [Bacillus cereus AH676]
 gi|296324348|gb|ADH07276.1| cell wall hydrolase cwlJ [Bacillus thuringiensis BMB171]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|229110200|ref|ZP_04239774.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-15]
 gi|228673186|gb|EEL28456.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-15]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|222085236|ref|YP_002543766.1| hypothetical protein Arad_1389 [Agrobacterium radiobacter K84]
 gi|221722684|gb|ACM25840.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 246

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 62/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +Q+     R +           V+VN     L   E G   +R  + VGR     
Sbjct: 80  PPVPYQQIDPQFYRQRVADPTGEAPGSVVVNTRERHLYVTEAGGTAMRYGIGVGREGFA- 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 139 WQGRGVIQWRKKWPRWNPPDEMVARQ----------------------------PELVKY 170

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           DPG  N + +  +     ++++ Y +H  P+           +SGCVR
Sbjct: 171 SIANGGM-----DPGLKNPLGARALYIFEDNQDSLYRLHGNPDWRSIGK---AVSSGCVR 222

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   + +  P
Sbjct: 223 LLNQDVIDLYDRVPERAP 240


>gi|218515887|ref|ZP_03512727.1| hypothetical protein Retl8_20501 [Rhizobium etli 8C-3]
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 67/217 (30%), Gaps = 57/217 (26%)

Query: 150 GLDPSG-MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-----YVLVNIPAA 203
           GL  +G ++   +  A   P      Q    ++R+ ++ +           +++    A 
Sbjct: 7   GLAAAGLVLSLMSASAFAAPAGSDNTQRPAQIVRVAQMPKYVKPQFKRKKVHLMTTEAAG 66

Query: 204 ---------SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
                     L  VE      R  + VGR D        +I R    P W  P  + +++
Sbjct: 67  TVIIDTNNKYLYLVEGNNRATRYGIGVGR-DGFGWSGIVKIGRKAEWPAWTPPAEMRRRE 125

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
                                              + +       Q+ G+ N + +  + 
Sbjct: 126 -----------------------------------AAKGHIIPAYQEGGEDNPLGARAMY 150

Query: 315 F--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                R+  + +H T +P      +   +SGC+R+ N
Sbjct: 151 LYQGGRDTIFRIHGTNQPWTIGLNM---SSGCIRMMN 184


>gi|206971930|ref|ZP_03232879.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH1134]
 gi|206733315|gb|EDZ50488.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH1134]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|42781838|ref|NP_979085.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987]
 gi|206973778|ref|ZP_03234696.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97]
 gi|217960192|ref|YP_002338752.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187]
 gi|222096255|ref|YP_002530312.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1]
 gi|229139388|ref|ZP_04267959.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26]
 gi|42737762|gb|AAS41693.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus ATCC 10987]
 gi|206747934|gb|EDZ59323.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus H3081.97]
 gi|217063319|gb|ACJ77569.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus AH187]
 gi|221240313|gb|ACM13023.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus Q1]
 gi|228643935|gb|EEL00196.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST26]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|39934220|ref|NP_946496.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|39648068|emb|CAE26588.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
          Length = 267

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++ P   L  V+     LR  V VGR    T      I      P W  P+ ++ +  
Sbjct: 140 IVIDTPNKFLYLVQGDGKALRYGVGVGRPG-FTWSGVKTITAKREWPAWTPPKEMLARR- 197

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 198 --------------------------------------PDLPRHMEGGPANPLGARAMYL 219

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+RN
Sbjct: 220 GSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 248


>gi|30020874|ref|NP_832505.1| cell wall hydrolase cwlJ [Bacillus cereus ATCC 14579]
 gi|218234005|ref|YP_002367468.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264]
 gi|228921423|ref|ZP_04084746.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228939871|ref|ZP_04102448.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972761|ref|ZP_04133360.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228979345|ref|ZP_04139681.1| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407]
 gi|228985846|ref|ZP_04145995.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229070227|ref|ZP_04203479.1| Spore cortex-lytic enzyme [Bacillus cereus F65185]
 gi|229079940|ref|ZP_04212471.1| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2]
 gi|229103362|ref|ZP_04234044.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28]
 gi|229116269|ref|ZP_04245659.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3]
 gi|229128092|ref|ZP_04257074.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4]
 gi|229145328|ref|ZP_04273717.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24]
 gi|229156330|ref|ZP_04284426.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342]
 gi|229179035|ref|ZP_04306392.1| Spore cortex-lytic enzyme [Bacillus cereus 172560W]
 gi|229190847|ref|ZP_04317839.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876]
 gi|61242533|sp|P0A3V0|SLEB_BACCR RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; AltName:
           Full=Germination-specific amidase; Flags: Precursor
 gi|61242541|sp|P0A3V1|SLEB_BACCE RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; AltName:
           Full=Germination-specific amidase; Flags: Precursor
 gi|1644192|dbj|BAA09800.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus]
 gi|29896427|gb|AAP09706.1| Cell wall hydrolase cwlJ [Bacillus cereus ATCC 14579]
 gi|218161962|gb|ACK61954.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus B4264]
 gi|228592637|gb|EEK50464.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 10876]
 gi|228604403|gb|EEK61867.1| Spore cortex-lytic enzyme [Bacillus cereus 172560W]
 gi|228627205|gb|EEK83936.1| Spore cortex-lytic enzyme [Bacillus cereus ATCC 4342]
 gi|228638167|gb|EEK94608.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST24]
 gi|228655367|gb|EEL11223.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-Cer4]
 gi|228667101|gb|EEL22553.1| Spore cortex-lytic enzyme [Bacillus cereus Rock1-3]
 gi|228679858|gb|EEL34053.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-28]
 gi|228703319|gb|EEL55774.1| Spore cortex-lytic enzyme [Bacillus cereus Rock4-2]
 gi|228712890|gb|EEL64813.1| Spore cortex-lytic enzyme [Bacillus cereus F65185]
 gi|228773881|gb|EEM22298.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228780349|gb|EEM28580.1| Spore cortex-lytic enzyme [Bacillus thuringiensis Bt407]
 gi|228786976|gb|EEM34956.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228819802|gb|EEM65850.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228838196|gb|EEM83514.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|312828406|emb|CBY16475.1| SceA protein [Bacillus thuringiensis serovar kurstaki str.
           YBT-1520]
 gi|326940519|gb|AEA16415.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 259

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|192289746|ref|YP_001990351.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283495|gb|ACE99875.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 262

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++ P   L  V+     LR  V VGR    T      I      P W  P+ ++ +  
Sbjct: 135 IVIDTPNKFLYLVQGDGKALRYGVGVGRPG-FTWSGVKTITAKREWPAWTPPKEMLARR- 192

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 193 --------------------------------------PDLPRHMEGGPANPLGARAMYL 214

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+RN
Sbjct: 215 GSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 243


>gi|239828519|ref|YP_002951143.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
 gi|239808812|gb|ACS25877.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. WCH70]
          Length = 165

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 31/91 (34%), Gaps = 11/91 (12%)

Query: 278 GKEVFVEEVDW----NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
           G+ +    +       +    +F+   + P       +  +     +   +H T +P   
Sbjct: 74  GRTIRTYPIGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKVH-YGIHGTNDPSSI 132

Query: 333 NNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
                + + GC+R+ N  +++    +   T 
Sbjct: 133 GK---YVSKGCIRMHNKDVLEFASIVPNGTE 160


>gi|294632792|ref|ZP_06711351.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
 gi|292830573|gb|EFF88923.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces sp. e14]
          Length = 248

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESA 141
             D     GW     R L  G S   V  L+ R+       PS    G+  +F     +A
Sbjct: 30  LTDTARAYGW----SRTLSQGASGADVTELQIRVAGWAADSPSHSIVGVDGSFGPATAAA 85

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+ FQ  +GL   G+   +T   +N 
Sbjct: 86  VRRFQAAYGLGVDGVAGPATQAQLNA 111


>gi|188589391|ref|YP_001922286.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499672|gb|ACD52808.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum E3
           str. Alaska E43]
          Length = 697

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 19/153 (12%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD----LDPSK 128
           +     +K +     I   G     P  PL L + + +V+ ++++L         +    
Sbjct: 298 QYYFGYDKTLVRATMIE--GIPESYPGTPLRLNDENNNVKVIQKQLNRISKNFPAIPKIP 355

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
             +  FD   E AVK+FQ    L   G+V  +T          RI  + V + R+ +L +
Sbjct: 356 YENGKFDKITEDAVKVFQKVFNLTQDGIVGRATWY--------RISSIYVGVKRLAELDQ 407

Query: 189 QK-----MGLRYVLVNIPAASLEAVENGKVGLR 216
           +             V  P   L+    G+    
Sbjct: 408 EPEIDGENPPPDSGVEYPGYLLKYGSRGEKVKE 440



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V   ++    L  +  +      +  FD   E++VK  Q + GL  +
Sbjct: 609 PGFDLELGDQDGYVTVFQKYVNVLAKNNYISSQIEENGVFDKRTENSVKELQEKFGLKVT 668

Query: 155 GMVDSSTLE 163
           G+VD  T +
Sbjct: 669 GVVDKITWD 677



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F    +  V +FQ   GL P G
Sbjct: 425 PGYLLKYGSRGEKVKEVQNYLSVISKSYNIPSIKADGIFGQMTKDTVIVFQRLFGLSPDG 484

Query: 156 MVDSSTLEAM 165
           +V  +T   +
Sbjct: 485 VVGLNTWNKI 494


>gi|297545556|ref|YP_003677858.1| carboxyl-terminal protease [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843331|gb|ADH61847.1| carboxyl-terminal protease [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 456

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G+    V+ +++ L I      +      F     +AVK  Q + GL P+G+ D 
Sbjct: 370 GTLKVGSKGNDVKIIQKHLNILKF--NAGPEDGIFGPKTANAVKKLQKKAGLTPTGVFDK 427

Query: 160 STLEAMNV 167
           +T +AM  
Sbjct: 428 NTYDAMVK 435


>gi|229150962|ref|ZP_04279173.1| Spore cortex-lytic enzyme [Bacillus cereus m1550]
 gi|228632522|gb|EEK89140.1| Spore cortex-lytic enzyme [Bacillus cereus m1550]
          Length = 259

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|148381127|ref|YP_001255668.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153930963|ref|YP_001385502.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934739|ref|YP_001388908.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
 gi|148290611|emb|CAL84740.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927007|gb|ABS32507.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930653|gb|ABS36152.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
          Length = 231

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKITNKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYY--NGDPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|21220813|ref|NP_626592.1| peptidodoglycan-binding membrane protein [Streptomyces coelicolor
           A3(2)]
 gi|8246786|emb|CAB92821.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           coelicolor A3(2)]
          Length = 452

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 34/109 (31%), Gaps = 20/109 (18%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII--- 120
            S  P  S  T A               G         L  G+    V  L++RL     
Sbjct: 352 RSAEPSQSTTTPAD--------DAPQESGDDDSPDGGTLSRGDQGPEVVELQQRLKEKWM 403

Query: 121 -SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDSSTLEAMN 166
             GDLD        +D  VE AV+ +Q  + +     G+    T   + 
Sbjct: 404 YWGDLDGD------YDRQVEDAVRQYQWENRIRTDRVGVYGPDTRRKLE 446


>gi|56963693|ref|YP_175424.1| peptidoglycan binding domain-containing protein [Bacillus clausii
           KSM-K16]
 gi|56909936|dbj|BAD64463.1| peptidoglycan-binding domain-containing protein [Bacillus clausii
           KSM-K16]
          Length = 362

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 20/151 (13%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDR------FDNFLARVDMGIDSDIPIISKET 74
            M  ++ ++ +      E + +    + ++        +            +     + +
Sbjct: 29  TMANAMSDRTLSQGDSGEQVEQLQLLLTDNGVFDKEDINGTFGNSTASAIKEF----QAS 84

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
                  IA  Q + +        +  L  G+    V+ L+++L+          +   F
Sbjct: 85  EDLLVDGIAGLQTLGA--------LHALEHGDEGKLVEELQKQLLNLNYYKGE--VDGLF 134

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  E AV+ FQ  +G+   G+   +T   +
Sbjct: 135 GSLTERAVENFQSDNGIAVDGIAGPATYSKL 165


>gi|304404662|ref|ZP_07386323.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304346469|gb|EFM12302.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 389

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+    V R++  L  +G   P   +   F +  E AV+ FQ  + L+  G+V   T
Sbjct: 11  IKRGSKGEEVTRIQTLLNKAGF--PPGTVDSDFGSNTEEAVRNFQKANHLEVDGVVGKDT 68

Query: 162 LE 163
             
Sbjct: 69  WA 70


>gi|157364476|ref|YP_001471243.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga lettingae TMO]
 gi|157315080|gb|ABV34179.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga lettingae TMO]
          Length = 399

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 53/153 (34%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++VN   A L    NG +     V +G+ D   P             YW     I++K++
Sbjct: 267 IVVNTTVARLALYYNGTLVKSFPVAIGKSDTTPP-----------GVYW-----IVKKEI 310

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
              L                  G+ +                       IN + +  ++ 
Sbjct: 311 DPAL---------------YWYGEYIPPRS------------------PINGLGTRYLQL 337

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +     +H T +P          + GC+R+ N
Sbjct: 338 SNP-TYGIHGTTKPWEIGKR---ISHGCIRMLN 366


>gi|209516749|ref|ZP_03265601.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
 gi|209502866|gb|EEA02870.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
          Length = 272

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G++   V+  ++ L  +G       +   +     +AV  +Q   GL P G+   
Sbjct: 4   DVLQQGDTGDDVKTWQQCLARNGF--NPGEIDGVYGQATVAAVIAYQKSEGLLPDGVAGP 61

Query: 160 STLEAMN 166
            TL A+ 
Sbjct: 62  RTLLALG 68


>gi|323706253|ref|ZP_08117820.1| spore cortex-lytic enzyme [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534417|gb|EGB24201.1| spore cortex-lytic enzyme [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 238

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GNS   V R++ RL   G  D    +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNSGSDVSRVQSRLKDWGYYD--GPVDGFFGVRTWLAVRKFQANNGLNVTGIVDDQTKVA 99

Query: 165 MNVPVDL 171
           +   +  
Sbjct: 100 LGFNISQ 106


>gi|240139107|ref|YP_002963582.1| hypothetical protein MexAM1_META1p2527 [Methylobacterium extorquens
           AM1]
 gi|240009079|gb|ACS40305.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens AM1]
          Length = 205

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 44/153 (28%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V+     L  V  G   +R  V VGR    T    ++I      P W  P ++I +  
Sbjct: 78  IVVSTAERRLYYVMPGGQAVRYGVGVGRPG-FTWSGVNKITAKREWPGWTPPAAMIARR- 135

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+       G  N + +  +  
Sbjct: 136 --------------------------------------PDLPRYMAGGIENPLGARAMYI 157

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H + EP          +SGC+R+ N
Sbjct: 158 GKSE-YRIHGSNEPDTIGQ---AVSSGCIRMTN 186


>gi|169334010|ref|ZP_02861203.1| hypothetical protein ANASTE_00402 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258727|gb|EDS72693.1| hypothetical protein ANASTE_00402 [Anaerofustis stercorihominis DSM
           17244]
          Length = 230

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  V+ ++E+L   G  D S  +   F A  E AVK FQ ++GL   G    STLE 
Sbjct: 34  GSPAAHVKPVQEKLKRWGYYDGS--VDGKFGAATEKAVKYFQRKNGLTQDGKAGKSTLEK 91

Query: 165 MN 166
           M 
Sbjct: 92  MG 93


>gi|291300295|ref|YP_003511573.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569515|gb|ADD42480.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 364

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 27/65 (41%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+S   V   +  L  SG        +  +D     +VK FQ   GL  +G +DS 
Sbjct: 226 ALKDGDSGDEVTAAQCLLDKSGRPTTDGDPNGEYDKATAKSVKQFQADIGLKETGEIDSH 285

Query: 161 TLEAM 165
           T  A+
Sbjct: 286 TWTAL 290



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G    +V RL+  L  +  L+ +  +   F A   +A K +Q + GLD  G+V  +T
Sbjct: 299 LQEGEEGRNVSRLQRALTAA--LETTVPIDGKFTAETTAAAKKYQEKAGLDADGIVGVNT 356

Query: 162 LEAMNV 167
             A+  
Sbjct: 357 WRALRA 362


>gi|330503105|ref|YP_004379974.1| PG-binding-1 domain-containing protein [Pseudomonas mendocina
           NK-01]
 gi|328917391|gb|AEB58222.1| PG-binding-1 domain-containing protein [Pseudomonas mendocina
           NK-01]
          Length = 285

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+ S +VQ+L+  L  +G           F    E AV+ +Q++ GL   G+    T
Sbjct: 7   LRHGDKSQAVQQLQWALNAAG---ARLEPDGDFGDETEKAVRAYQLKVGLVVDGVAGEKT 63

Query: 162 LEAMNVPVDLRI 173
           L A+      R+
Sbjct: 64  LSALAGADCSRL 75


>gi|307941741|ref|ZP_07657096.1| ErfK/YbiS/YcfS/YnhG [Roseibium sp. TrichSKD4]
 gi|307775349|gb|EFO34555.1| ErfK/YbiS/YcfS/YnhG [Roseibium sp. TrichSKD4]
          Length = 261

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 53/186 (28%), Gaps = 44/186 (23%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            ++  P   + RQ+    +              +++N     L  V+      R  V VG
Sbjct: 101 ASVRNPAPQQRRQIAPQFLPTIVDYRGPHKAGTIIINTNEKYLYLVQKDGTARRYGVGVG 160

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +   +      ++ R    P W  P ++ ++                             
Sbjct: 161 KPGFE-WAGTHKVTRKAEWPDWRPPAAMRKRR---------------------------- 191

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                      P+       G  N + +  +         +H + +P    +     +SG
Sbjct: 192 -----------PDLPNFMPGGPENPLGARALYLG-STLYRIHGSNQPWTIGH---AVSSG 236

Query: 343 CVRVRN 348
           C+R+RN
Sbjct: 237 CIRMRN 242


>gi|226945800|ref|YP_002800873.1| PG-binding-1 domain-containing protein [Azotobacter vinelandii DJ]
 gi|226720727|gb|ACO79898.1| PG-binding-1 domain-containing protein [Azotobacter vinelandii DJ]
          Length = 276

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L L + +++V  L+++L   G           +    E AV+ +Q R GL   G+    
Sbjct: 3   TLRLDDRNLAVLTLQKQLNALG---AGLYPDGHYGEQTEQAVRDYQRRTGLVVDGIAGPK 59

Query: 161 TLEAMN 166
           T+ A+ 
Sbjct: 60  TMAALA 65


>gi|260575033|ref|ZP_05843034.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
 gi|259022655|gb|EEW25950.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
          Length = 275

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 60/198 (30%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + +L     R     + +     +++N     L  V      +R  + VG+   + 
Sbjct: 56  PAIPLDKLPAQFQRQTVAYQTEEVPGTIIINPSERLLYLVTGKNKAIRYGIAVGKAGFE- 114

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P+ +I +                              E   W
Sbjct: 115 WAGVANVAERKLWPTWTPPKEMIARK----------------------------PELARW 146

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSR---NNTYMHDTPEPILFNNVVRFETSGCVR 345
                      Q  G  N + +  +   S        +H TP+     +     +SGC+R
Sbjct: 147 EKG--------QPGGPTNPLGARALYLNSNGRDYGYRIHGTPDWQSIGHN---ASSGCIR 195

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   + ++  
Sbjct: 196 MINQDVIDLFQRVPENAK 213


>gi|327191147|gb|EGE58191.1| hypothetical protein RHECNPAF_3350013 [Rhizobium etli CNPAF512]
          Length = 228

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 42/188 (22%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A  V V    + ++    R K  L        V+++     L  VE      R  + VGR
Sbjct: 36  AQIVRVAQMPKYVKPQFKRKKVRLMTTEAAGTVIIDTNNKYLYLVEGNNRATRYGIGVGR 95

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D        +I R    P W  P  + +++                             
Sbjct: 96  -DGFGWSGIVKIGRKAEWPAWTPPAEMRRRE----------------------------- 125

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                 + +       Q+ G+ N + +  +      R+  + +H T +P      +   +
Sbjct: 126 ------AAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---S 176

Query: 341 SGCVRVRN 348
           SGC+R+ N
Sbjct: 177 SGCIRMMN 184


>gi|148253945|ref|YP_001238530.1| hypothetical protein BBta_2457 [Bradyrhizobium sp. BTAi1]
 gi|146406118|gb|ABQ34624.1| hypothetical protein BBta_2457 [Bradyrhizobium sp. BTAi1]
          Length = 226

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 16/102 (15%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +  E         PG  N M S  +      ++  + +H T +P          +SGC+R
Sbjct: 123 SEIERLGVPTFVAPGPDNPMGSRAMYLYANGKDTLFRIHGTNQPEYIGAS---ISSGCIR 179

Query: 346 VRN--IIDLDV--------WLLKDTPTWSRYHIEEVVKTRKT 377
           + N   IDL           +L      S Y  +  ++   T
Sbjct: 180 LTNEDAIDLYNRVKVGTIVVVLDPKKGDSPYKPQMALQGGAT 221


>gi|228958984|ref|ZP_04120685.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229196921|ref|ZP_04323662.1| Spore cortex-lytic enzyme [Bacillus cereus m1293]
 gi|228586644|gb|EEK44721.1| Spore cortex-lytic enzyme [Bacillus cereus m1293]
 gi|228800645|gb|EEM47561.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 239

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 12  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 69

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 70  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 125

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 126 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 157


>gi|15889613|ref|NP_355294.1| hypothetical protein Atu2336 [Agrobacterium tumefaciens str. C58]
 gi|15157507|gb|AAK88079.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 205

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 57/183 (31%), Gaps = 43/183 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + +++  L R +   +       V+V+ PA  L  V      +R  V VGR     
Sbjct: 42  PAMHLDKVKPELRRQEVTYDTSHPAGTVVVDTPARRLYYVMGEGRAMRYGVGVGRQG-LA 100

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I R    P W    +++++D                                  
Sbjct: 101 LKGDAYIGRKSEWPSWTPTANMMRRD---------------------------------- 126

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
             P    F      G  N + +  +      +     +H T +P    + +   +SGC+R
Sbjct: 127 --PRNLKFAGGMPGGPNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAM---SSGCIR 181

Query: 346 VRN 348
           + N
Sbjct: 182 MLN 184


>gi|227497955|ref|ZP_03928135.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226832613|gb|EEH64996.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 621

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 8/87 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GW       L  G + V V+ +++RL IS         +  F    ++AV+ FQ R GL 
Sbjct: 395 GW---ATNELTPGMNGVKVRIVQQRLGISN-GSALATANGTF----QNAVRNFQRRAGLP 446

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            +G+VD  T  AM       + Q Q  
Sbjct: 447 QTGVVDQQTWNAMGTGFSWWVDQYQAT 473


>gi|169794743|ref|YP_001712536.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           AYE]
 gi|169147670|emb|CAM85533.1| putative phage-related cell wall hydrolase [Acinetobacter baumannii
           AYE]
          Length = 280

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G+   +V  L+++L   G     D    +   F    E AV   Q + GL   G V 
Sbjct: 7   LKFGSKGDAVATLQKQLAKMGYKGVKDKPLSVDGHFGESTEFAVIQLQRKFGLVADGKVG 66

Query: 159 SSTLEAMNVP 168
             T +A+   
Sbjct: 67  DKTRQALAGD 76


>gi|148253206|ref|YP_001237791.1| ErfK/YbiS/YcfS/YnhG family protein [Bradyrhizobium sp. BTAi1]
 gi|146405379|gb|ABQ33885.1| putative ErfK/YbiS/YcfS/YnhG protein family [Bradyrhizobium sp.
           BTAi1]
          Length = 259

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V+ P   L  V+     LR  + VGR    T      I+     P W  P  ++ +  
Sbjct: 132 IVVDTPNKFLYLVQGEGKALRYGIGVGRPG-FTWSGVKTISAKREWPDWTPPPEMLARR- 189

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 190 --------------------------------------PDLPRHMEGGPENPLGARAMYL 211

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+RN
Sbjct: 212 GSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 240


>gi|83943946|ref|ZP_00956403.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
 gi|83954519|ref|ZP_00963230.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
 gi|83840803|gb|EAP79974.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
 gi|83845193|gb|EAP83073.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. EE-36]
          Length = 190

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 52/217 (23%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVN---LMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NG 211
              + L A   PV      ++ N               +G   ++ +  + +L     +G
Sbjct: 20  FTPALLRA-QTPVPEIAAPVRHNTNGFSSQNWQDHFDTLGKAAIVADTSSRALHYWGGDG 78

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           +        V R D  T   ++RI R    P W    S+I++D       D +Y+     
Sbjct: 79  ETYKIYPTSVPRSDELTKRGYTRIVRKRVGPDWTPTPSMIERDP------DLKYM----- 127

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPIL 331
                                         PG  N + +  +         +H T +   
Sbjct: 128 -----------------------------PPGPDNPLGTHAMYLSWP-AYLIHGTHDTRK 157

Query: 332 FNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                R  + GC+ + N   +   L +  P  ++  I
Sbjct: 158 IG---RQSSDGCIGLYN--HMIEALYQIAPIGTQVRI 189


>gi|182437776|ref|YP_001825495.1| hypothetical protein SGR_3983 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466292|dbj|BAG20812.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 205

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +   GGW  +       G S  +V  ++  +   G       +  ++ +    AVK F
Sbjct: 68  RGVDLSGGWSRID-----PGASGATVVVIQHLMNQRG---HGLAVDGSYGSLSVGAVKRF 119

Query: 146 QMRHGLDPSGMVDSSTL 162
           Q   GL   G V  +T 
Sbjct: 120 QRSAGLAADGQVGPATW 136



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 9/92 (9%)

Query: 80  KAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           K       + + G      WP L    L  G S   V+ L+  L   G       +   F
Sbjct: 117 KRFQRSAGLAADGQVGPATWPVLVY-TLRQGASGSPVRALQTALNRRG---ARLAVDGGF 172

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   SAV+ +Q  + L   G     T  A+ 
Sbjct: 173 GSVTTSAVRAYQSGNRLVTDGEAGPVTWRALT 204


>gi|256368603|ref|YP_003106109.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|255998761|gb|ACU47160.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
          Length = 206

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++P     + 
Sbjct: 33  YPSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|16079643|ref|NP_390467.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310519|ref|ZP_03592366.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314843|ref|ZP_03596648.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319764|ref|ZP_03601058.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324043|ref|ZP_03605337.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321312085|ref|YP_004204372.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|113674|sp|P24808|CWLA_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlA; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|39874|emb|CAA35788.1| hydrolase [Bacillus subtilis]
 gi|142802|gb|AAA62676.1| N-Acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
 gi|1217875|dbj|BAA06960.1| cell wall lytic enzyme (autolysin) [Bacillus subtilis]
 gi|1303768|dbj|BAA12424.1| CwlA [Bacillus subtilis]
 gi|2635035|emb|CAB14531.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|320018359|gb|ADV93345.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           BSn5]
          Length = 272

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP               V ++++ L            + G+   +      A++ FQ  
Sbjct: 191 ALPSGIFKVKSPMMRGEKVTQIQKALAALYFYPDKGAKNNGIDGVYGPKTADAIRRFQSM 250

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+    T   +  
Sbjct: 251 YGLTQDGIYGPKTKAKLEA 269


>gi|209524668|ref|ZP_03273215.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494812|gb|EDZ95120.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 401

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L++RL   G       +   +      A+  FQ+  GL+ +G+V+  T +++  
Sbjct: 71  DYDIIELQKRLQEKGYYL--GAIDGIYGEKTREAISNFQLSIGLESTGIVNQETWDSLLG 128

Query: 168 PVDL 171
               
Sbjct: 129 NSAA 132


>gi|206599573|ref|YP_002242012.1| gp29 [Mycobacterium phage Brujita]
 gi|206282722|gb|ACI06243.1| gp29 [Mycobacterium phage Brujita]
 gi|302858466|gb|ADL71213.1| gp29 [Mycobacterium phage island3]
          Length = 314

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   V+ L+ RL               F    E  V+ FQ R GL   G+   +TL A+ 
Sbjct: 189 TGERVKALQARLNRDYPAYSDLDEDGEFGPLTEQVVREFQRRSGLLDDGIAGPATLAALG 248

Query: 167 VPVDL 171
           +    
Sbjct: 249 LSFQP 253


>gi|114705545|ref|ZP_01438448.1| putative signal peptide protein [Fulvimarina pelagi HTCC2506]
 gi|114538391|gb|EAU41512.1| putative signal peptide protein [Fulvimarina pelagi HTCC2506]
          Length = 240

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 47/197 (23%)

Query: 160 STLEAMNVPVDLRIRQLQV-----NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            T E+ + P  +R   +Q         R    +E +     ++V+     L  VENG   
Sbjct: 36  GTWESTDDPRVMRRTMMQQRRPSAAFNRANVNIETRERPGTIIVDTHRRYLYFVENGGRA 95

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
            R  V VG+          ++ R    P W+ P+ ++ ++                    
Sbjct: 96  TRYGVGVGKEG-FGWSGQMKVGRKAEWPDWIPPKEMVIRE-------------------- 134

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPIL 331
                            +      R   G  N + +  +      R++ + +H T +P  
Sbjct: 135 ---------------RRKGHILPARMAGGPKNPLGARALYLYRGGRDSLFRIHGTNQPWT 179

Query: 332 FNNVVRFETSGCVRVRN 348
                   +SGC+R+ N
Sbjct: 180 IGQR---LSSGCIRMMN 193


>gi|229161629|ref|ZP_04289609.1| Spore cortex-lytic enzyme [Bacillus cereus R309803]
 gi|228621874|gb|EEK78720.1| Spore cortex-lytic enzyme [Bacillus cereus R309803]
          Length = 259

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGTKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|154251395|ref|YP_001412219.1| peptidoglycan-binding domain-containing protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155345|gb|ABS62562.1| Peptidoglycan-binding domain 1 protein [Parvibaculum
           lavamentivorans DS-1]
          Length = 310

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           ++  R L       +   V+ L   L+  G    +      FD  +E A+K FQ  +GL 
Sbjct: 239 DVTTRNLRLTSPRMTGNDVRALEAALVKEGY---AINCDGVFDEGLEKALKSFQQDYGLI 295

Query: 153 PSGMVDSSTL 162
             G+   +T 
Sbjct: 296 ADGVAGPATR 305


>gi|256390233|ref|YP_003111797.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256356459|gb|ACU69956.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 410

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 49/146 (33%), Gaps = 7/146 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RPL +G +   V+     L   G    + G S  + A   +AVK +Q   GLD +G VD 
Sbjct: 151 RPLTVGTTGADVKEFETDLAALGYTGFTPGTS--YTADTAAAVKKWQAAVGLDQTGNVDP 208

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           +  +A      +RI  L  +L                LV +    L   + G V     V
Sbjct: 209 A--QAAVTSGPIRIAALHTSLGSAAGGQVLDDTGTTKLVTVA---LAVAKEGLVKAGDKV 263

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWV 245
            V   D  T          +      
Sbjct: 264 TVTLPDGSTTAGTVTGVGKVATVPST 289


>gi|226305739|ref|YP_002765699.1| hypothetical protein RER_22520 [Rhodococcus erythropolis PR4]
 gi|226184856|dbj|BAH32960.1| hypothetical protein RER_22520 [Rhodococcus erythropolis PR4]
          Length = 262

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 18/150 (12%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           GL+L E  I           S    ++ + +   A  D          S + +A  ++  
Sbjct: 125 GLNLFENNIFWGAD-----WSRADEMHYQLNGGTASGDGA--------SAKLVAFAQRLE 171

Query: 83  AFYQDILSRGGWPELPIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
             Y  +L+    P +  +P     L  GN+   V  L+  L           +   F   
Sbjct: 172 GGYLGLLAGTAVPPIIPKPVARPTLRRGNTGGDVTYLQGLLNRMFASYSKLVVDGDFGPA 231

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            ES V+  Q R GL   G+V S T  AM V
Sbjct: 232 TESVVREVQRRSGLAVDGIVGSDTWRAMGV 261


>gi|126729787|ref|ZP_01745600.1| hypothetical protein SSE37_04915 [Sagittula stellata E-37]
 gi|126709906|gb|EBA08959.1| hypothetical protein SSE37_04915 [Sagittula stellata E-37]
          Length = 335

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 2/108 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V+ L+E L               FD    +A+  FQ  +GL    +  + 
Sbjct: 174 VLRFGDRGADVRVLQEDLAGLRYFA--GRRDGRFDTLTRAALLAFQADNGLATDAVAGAL 231

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           T  A+       +R +    +R +     K G    +       L AV
Sbjct: 232 TWAALARAQPRPLRDIAPADLRAEGSSTMKGGDAAEVALTGGGLLAAV 279


>gi|118590650|ref|ZP_01548051.1| hypothetical protein SIAM614_05768 [Stappia aggregata IAM 12614]
 gi|118436626|gb|EAV43266.1| hypothetical protein SIAM614_05768 [Stappia aggregata IAM 12614]
          Length = 290

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 51/179 (28%), Gaps = 44/179 (24%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
             + RQ+    +      +       ++++     L  V+N     R  V VG+   +  
Sbjct: 137 APQTRQIAPQFLPTIVNYDGPHKAGTIVIDTNERFLYLVQNDGTARRYGVGVGKPGFE-W 195

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
               ++ R    P W  P  + ++                                    
Sbjct: 196 AGTHKVTRKAEWPDWRPPAEMRKRR----------------------------------- 220

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               P+       G  N + +  +         +H + +P    +     +SGC+R+RN
Sbjct: 221 ----PDLPTFMAGGPENPLGARAMYLG-STLYRIHGSNQPWTIGH---AVSSGCIRMRN 271


>gi|47569014|ref|ZP_00239704.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241]
 gi|47554283|gb|EAL12644.1| spore cortex-lytic enzyme prepeptide [Bacillus cereus G9241]
          Length = 259

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPPQDKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|329934815|ref|ZP_08284856.1| peptidoglycan-binding membrane protein [Streptomyces
           griseoaurantiacus M045]
 gi|329305637|gb|EGG49493.1| peptidoglycan-binding membrane protein [Streptomyces
           griseoaurantiacus M045]
          Length = 391

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 37/128 (28%), Gaps = 7/128 (5%)

Query: 49  NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ-DILSRGGWPELPIRPLHLGNS 107
           +       A       S     +  T    +      +    + G         L  G+ 
Sbjct: 267 DTASATATASGGRTASSSATPSATRTARDAQATSEATRSKKPATGEDQHQDPPVLRRGDD 326

Query: 108 SVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDSSTLEA 164
              V+ L+ RL      L     +   +D  VE+AV  +Q   G+     G+   +T   
Sbjct: 327 GPEVEELQRRLRQRLFYL---GTVDGTYDGDVETAVAAYQSARGITDDPRGVYGEATRAR 383

Query: 165 MNVPVDLR 172
           +    D  
Sbjct: 384 LESETDEP 391


>gi|194017081|ref|ZP_03055693.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194010949|gb|EDW20519.1| N-acetylmuramoyl-L-alanine amidase CwlA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 273

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 97  LPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRH 149
           LP              +V++++E +            + G+   +     +AVK FQ+ H
Sbjct: 193 LPTGIFKVKAPLMKGDAVKQIQEAIAALYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMH 252

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL   G+    T   +  
Sbjct: 253 GLAADGIYGPKTKAKLEA 270


>gi|88807653|ref|ZP_01123165.1| hypothetical protein WH7805_13918 [Synechococcus sp. WH 7805]
 gi|88788867|gb|EAR20022.1| hypothetical protein WH7805_13918 [Synechococcus sp. WH 7805]
          Length = 151

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 45/174 (25%), Gaps = 51/174 (29%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              ++ +++    +  + NG       V +G     TP    ++     NP +   +S  
Sbjct: 20  EDTHIHLDLRQRRISVIRNGHRIGPWPVAIGDPRTPTPTGVFQVENKRVNPQYESTKS-- 77

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                                        V                     G  + +   
Sbjct: 78  ---------------------------GRVHPVT-----------------GPSSPLGHR 93

Query: 312 KIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTP 361
            I F     N   +H TP P          ++GCVR+ N     L   +   TP
Sbjct: 94  WIGFLRQGPNQFGIHGTPWPHWVKIRA-AVSNGCVRMLNAHVQKLYELVDVGTP 146


>gi|190572272|ref|YP_001970117.1| hypothetical protein Smlt0193 [Stenotrophomonas maltophilia K279a]
 gi|190010194|emb|CAQ43802.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 663

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
                 G  S  V++++E+L   G +            F    ++AV+  Q  +GL   G
Sbjct: 461 AELYKQGAHSEGVRKVQEQLGHLGYVGADGKPLVEDGRFGRNTDAAVRQLQKDNGLVADG 520

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMR-------------IKKLLEQKMGLRYVLVNIPA 202
           +V + TLEA+    + R R L +N  R             ++ L       R+ L +  A
Sbjct: 521 IVGAKTLEAIK---EARERPL-LNDERHPRNPLFIQASKGLELLPAGTFKDRHALESAAA 576

Query: 203 A 203
           A
Sbjct: 577 A 577


>gi|75812752|ref|YP_320369.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75705508|gb|ABA25180.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 171

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDL---------DPSKGLSVAFDAYVESAVKLFQ 146
           +L +  L  G+   +VQ L+  L  +G L              +   F A   SAV+  Q
Sbjct: 72  DLTLPTLRQGDRGRNVQLLQRILQDNGFLGAAGVRLGNPRGAIIDGIFGAVTVSAVRDLQ 131

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
            R+ +  +G V+ +T E +++
Sbjct: 132 RRYRIPVTGRVNPTTWEVLDM 152


>gi|86356459|ref|YP_468351.1| hypothetical protein RHE_CH00813 [Rhizobium etli CFN 42]
 gi|86280561|gb|ABC89624.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 230

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 42/148 (28%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  VE      R  + VGR D        +I R    P W  P  + +++         
Sbjct: 78  YLYLVEGNNRATRYGIGVGR-DGFGWSGIVKIGRKAEWPAWTPPAEMRRRE--------- 127

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNT 321
                                     + +       Q+ G+ N + +  +      R+  
Sbjct: 128 --------------------------AAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTI 161

Query: 322 Y-MHDTPEPILFNNVVRFETSGCVRVRN 348
           + +H T +P      +   +SGC+R+ N
Sbjct: 162 FRIHGTNQPWTIGLNM---SSGCIRMMN 186


>gi|20808900|ref|NP_624071.1| spore cortex-lytic enzyme prepeptide [Thermoanaerobacter
           tengcongensis MB4]
 gi|20517559|gb|AAM25675.1| spore cortex-lytic enzyme prepeptide [Thermoanaerobacter
           tengcongensis MB4]
          Length = 234

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G  D    +   F      AV+ FQ  +GL  +G+VD  T  A
Sbjct: 40  GNTGSDVAKVQARLKAWGYYD--GPVDGFFGVKTWLAVRKFQAYNGLAVTGIVDDDTKVA 97

Query: 165 MNVPVDL 171
           +      
Sbjct: 98  LGFTTTA 104


>gi|54307653|ref|YP_128673.1| putative general secretion pathway protein A [Photobacterium
           profundum SS9]
 gi|46912076|emb|CAG18871.1| putative general secretion pathway protein A [Photobacterium
           profundum SS9]
          Length = 556

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 37/126 (29%), Gaps = 7/126 (5%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGW--PE 96
            +     S     +    A     I+        E IA   + +  +        W  P 
Sbjct: 417 AMVTLQDSQQQTFYAVVYAVTAKRIELL---FGGERIAVKPEWLEQHWQGEYTLLWRPPH 473

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
                +  G     V  L ++L     L  ++  S  FD  V   ++ FQ    L   G+
Sbjct: 474 GSKTTIRYGQQGPRVAWLNQQLNA--FLGVTQTRSDYFDQSVLEKLRRFQRSQDLAADGI 531

Query: 157 VDSSTL 162
               TL
Sbjct: 532 AGPLTL 537


>gi|304393047|ref|ZP_07374976.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
 gi|303294812|gb|EFL89183.1| peptidoglycan binding domain-containing protein [Ahrensia sp.
           R2A130]
          Length = 182

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V+RL+E+L +        G    F    + AV  FQ  +GL   G+    T
Sbjct: 4   LKKGMKGAPVKRLQEKLGV--------GADGDFGPGTQKAVMDFQKANGLSVDGIAGPDT 55

Query: 162 LEAMN 166
             AM 
Sbjct: 56  FTAMG 60



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 11/95 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G+    V++L+  L               F +  + AV  +Q  +GL   GM   ST
Sbjct: 67  LRVGSRGEQVKKLQAAL--------GASADGIFGSGTKQAVMDYQKANGLAVDGMAGPST 118

Query: 162 LE---AMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
           L    A +      + + ++          + +  
Sbjct: 119 LATMDAFDTMDASVVSRAEITPEEEAAFDGEDLPE 153


>gi|240169597|ref|ZP_04748256.1| putative toxin subunit [Mycobacterium kansasii ATCC 12478]
          Length = 3193

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 59/201 (29%), Gaps = 18/201 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L L  ++  V  L+  L   G            F A   +AV  FQ   GL  +G V
Sbjct: 255 PRALRLNATNKDVPVLQRTLAFLGHAVNETEFKDTRFGASTRAAVLAFQKSAGLPETGHV 314

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D  TL A+N  V            RI+  +       +  +   +  L     G     +
Sbjct: 315 DRGTLAALNQAVIRANPAAAATTARIRGTVRDT---AWAGIKGASVELRTRAIGG----A 367

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V++G+                F+  +  P        ++ L     Y       +   +
Sbjct: 368 GVVLGQRATLANGF--------FDLPYTAPVDAATGKPVSPLLLTVTYRDPAGAEI--GR 417

Query: 278 GKEVFVEEVDWNSPEPPNFIF 298
                   + W +    +  +
Sbjct: 418 KNLTNPPPMAWANFTQGDRPY 438



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 20/41 (48%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
               ++A++  Q R GL  +G +D  T + ++     + R+
Sbjct: 199 GPSTQAAIRTLQARFGLPATGTMDPETFDRVHAAAASKPRK 239



 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            V+ L + L   G    +  +  A       +AVK+ Q R GLD +G  + ST++A+ V 
Sbjct: 26  RVELLHQALGTLGLPVDAGEVDEAKLGKTTSAAVKVLQERAGLDQTGKFNKSTVDALKVH 85

Query: 169 VDLRI 173
           V+ ++
Sbjct: 86  VEDQL 90


>gi|150376490|ref|YP_001313086.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150031037|gb|ABR63153.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 243

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 61/189 (32%), Gaps = 42/189 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  RQ+    +R +           V+V+ P   L  VE G   +R  V +GR     
Sbjct: 69  PAVPYRQMDPKYLRQRVPDPTGEPAGTVVVDTPGRYLYLVEPGGTAMRYGVGIGREGFA- 127

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I+     P W  P  +I +                              E  ++
Sbjct: 128 WEGDGIIHWRQAWPRWKPPAEMIARR----------------------------PELAEY 159

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
           +            PG  N + +  +  F +  +    +H TPE           +SGCVR
Sbjct: 160 SVENGGM-----APGIKNPLGARALYIFQNGRDTLYRLHGTPEWNSIGK---ATSSGCVR 211

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 212 LVNQDVIDL 220


>gi|218663442|ref|ZP_03519372.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli IE4771]
          Length = 204

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 53/182 (29%), Gaps = 43/182 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++++ PA     V      +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYESSHAPGTIVIDTPARRAYYVLGDNRAMRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ I R    P W    ++ +++                                   
Sbjct: 101 AGNAYIGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +      +  +  +H T +P          +SGC+R+
Sbjct: 126 -ERYRRLAGGMPGGPNNPLGARAMYLYRSGNDTHFRIHGTNQPESIG---LAMSSGCIRM 181

Query: 347 RN 348
            N
Sbjct: 182 MN 183


>gi|149198883|ref|ZP_01875925.1| tonB-dependent receptor protein [Lentisphaera araneosa HTCC2155]
 gi|149138081|gb|EDM26492.1| tonB-dependent receptor protein [Lentisphaera araneosa HTCC2155]
          Length = 325

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 63/214 (29%), Gaps = 66/214 (30%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T+ A+ +   + I    +++ ++      +  ++    +    +L+ + +GK+     + 
Sbjct: 171 TIRAVQISNKIPIESSVIHVNQVLTFFGGQWEIKASKSH---YALQLLLDGKLFRFYNIG 227

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           +G+ D +TP     I+     P W                                    
Sbjct: 228 IGK-DNRTPFGEFFISGKKREPSW------------------------------------ 250

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-----YSRNNTYMHDTPEPILFNNV 335
                          + F       N + +  +        S     +H T EP      
Sbjct: 251 -------------KGYPF---GHPENVLGTRWMRLTKISDGSNEGYGIHGTSEPESIGT- 293

Query: 336 VRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
               + GC+R+RN  + +L  ++  +    +   
Sbjct: 294 --ASSLGCIRMRNEDVEELFNFIPDNKIKVTIED 325


>gi|119900262|ref|YP_935475.1| hypothetical protein azo3973 [Azoarcus sp. BH72]
 gi|119672675|emb|CAL96589.1| hypothetical protein azo3973 [Azoarcus sp. BH72]
          Length = 267

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G S  +V+RL+ RL+  G       +   F    E+AV  +Q   GL P G+    
Sbjct: 3   VLKRGASGAAVERLQRRLLECGF--DPGLIDGLFGGGSEAAVLAYQWSEGLLPDGIAGPR 60

Query: 161 TLEAMN 166
           TL+++ 
Sbjct: 61  TLKSLG 66


>gi|257056977|ref|YP_003134809.1| putative peptidoglycan-binding domain-containing protein
           [Saccharomonospora viridis DSM 43017]
 gi|256586849|gb|ACU97982.1| putative peptidoglycan-binding domain-containing protein
           [Saccharomonospora viridis DSM 43017]
          Length = 246

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G +   V+ L+ R+        +  +   + A  E+AVK FQ  +GL   G+   
Sbjct: 40  RTLSRGATGSDVRELQIRVAGWVASGENLVIDGVYGAATEAAVKRFQSGYGLAADGVAGP 99

Query: 160 STLEAM 165
           +T   +
Sbjct: 100 NTFNKI 105


>gi|209548411|ref|YP_002280328.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534167|gb|ACI54102.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 244

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   Q+     R + L         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAIPYEQIDPRYYRQRVLDPTGQPPGTIVVDTPSRFLYLVQGDGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 138 WQGSGVIQWRQKWPRWKPPNEMVARQ----------------------------PELVKY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           +PG  N + +  +  F +  +  Y +H  P+           +SGCVR
Sbjct: 170 SIENGGM-----EPGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LMNQDIIDLYDRVPTKAP 239


>gi|308172492|ref|YP_003919197.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307605356|emb|CBI41727.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens DSM 7]
          Length = 323

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMR 148
            LP              +V++++  L              G+  A+ A   +AVK FQ  
Sbjct: 242 RLPAGIFKVTSPLTRGEAVKQIQTALAALHYYPDKSAKNFGIDSAYGAKTANAVKRFQSM 301

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+    T   + 
Sbjct: 302 YGLPADGIYGPKTKAKLE 319


>gi|256826841|ref|YP_003150800.1| putative peptidoglycan-binding domain-containing protein
           [Cryptobacterium curtum DSM 15641]
 gi|256582984|gb|ACU94118.1| putative peptidoglycan-binding domain-containing protein
           [Cryptobacterium curtum DSM 15641]
          Length = 303

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 13/91 (14%)

Query: 86  QDILSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +D +    W  L      LG+              V  L++ L   G    +      F 
Sbjct: 58  RDEVDDKVWALLLDATFRLGDRTLYLRMPYFHGNDVAELQQALDALGF---ATSTDGMFG 114

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           A+ E A++LFQM  GL   G+  S T  A+ 
Sbjct: 115 AHTELALRLFQMNMGLPSDGIAGSFTFRAIA 145



 Score = 44.3 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +   ++S +VQ ++E+L   G L  +K ++  FD    +A+K F    G  P   VD 
Sbjct: 5   ETIRKHDASAAVQDVQEKLASLGYL-GTKQVTGTFDDATIAALKAFCKDSGFPPRDEVDD 63

Query: 160 STLE 163
               
Sbjct: 64  KVWA 67


>gi|257068140|ref|YP_003154395.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
 gi|256558958|gb|ACU84805.1| cell wall-associated hydrolase, invasion-associated protein
           [Brachybacterium faecium DSM 4810]
          Length = 280

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+   +VQ L+       D      +   F     SAVK +Q   GL   G+V
Sbjct: 84  STQKLRWGSRGGAVQELQ---SALNDHGAGLAVDGVFGPRTHSAVKSYQSSQGLQVDGVV 140

Query: 158 DSSTLEAMN 166
              T  A+N
Sbjct: 141 GPKTRAALN 149


>gi|186682191|ref|YP_001865387.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186464643|gb|ACC80444.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 135

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +G++  +V+  +  L   G    +  ++  FD    SAV  FQ   GL   G++   
Sbjct: 72  VLTVGSTGEAVKTAQNALKQQGFY--TANVNGVFDNKTRSAVIKFQKSKGLRADGIIGRR 129

Query: 161 TLEAMN 166
           TL ++ 
Sbjct: 130 TLASLK 135


>gi|322384552|ref|ZP_08058232.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150607|gb|EFX44084.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 216

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L++G  S  V  L+ERL   G      G++  +    + AV+ FQ  +GL  +G  D
Sbjct: 29  AMTLNIGTQSEHVLNLQERLSSLGYFKK--GITGYYGKITKEAVRDFQKAYGLSVTGSAD 86

Query: 159 SSTLE---AMNVPVDLRIRQLQ 177
           S+TL     M     + + QL 
Sbjct: 87  SATLAKLNQMAGSKQITLDQLA 108


>gi|192292497|ref|YP_001993102.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286246|gb|ACF02627.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 421

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 58/192 (30%), Gaps = 48/192 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   +  QL  NL R +     K     ++V+     L  V      +R  V VGR D
Sbjct: 215 EQPDADQTVQLPPNLRRQEVDFATKEPAGTIVVDTANTHLYYVLGNGRAIRYGVRVGR-D 273

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +I+R    P W  P  +I++                                
Sbjct: 274 GFTWNGVQKISRKAEWPDWHPPAEMIERQ------------------------------- 302

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 303 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 349

Query: 345 RV--RNIIDLDV 354
            +   ++ DL  
Sbjct: 350 GMLNDDVSDLFE 361


>gi|325919153|ref|ZP_08181210.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
 gi|325550360|gb|EGD21157.1| putative peptidoglycan-binding domain-containing protein
           [Xanthomonas gardneri ATCC 19865]
          Length = 606

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L  G     VQ +++ L   G  D           F      AV  FQ +HGL P G+V
Sbjct: 409 VLKHGARGGEVQSMQQDLNRLGVRDAQGNRLAEDGRFGDNTREAVIAFQKQHGLQPDGVV 468

Query: 158 DSSTLEAMNVPV 169
             +T  A++   
Sbjct: 469 GRNTQAALSALP 480


>gi|163940501|ref|YP_001645385.1| spore cortex-lytic enzyme SleB [Bacillus weihenstephanensis KBAB4]
 gi|229012007|ref|ZP_04169186.1| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048]
 gi|229133643|ref|ZP_04262469.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196]
 gi|163862698|gb|ABY43757.1| Spore cortex-lytic enzyme SleB [Bacillus weihenstephanensis KBAB4]
 gi|228649678|gb|EEL05687.1| Spore cortex-lytic enzyme [Bacillus cereus BDRD-ST196]
 gi|228749095|gb|EEL98941.1| Spore cortex-lytic enzyme [Bacillus mycoides DSM 2048]
          Length = 259

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQTRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKDTTTNKGNSGGGKQENKPPKSTGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|229030433|ref|ZP_04186473.1| Spore cortex-lytic enzyme [Bacillus cereus AH1271]
 gi|228730872|gb|EEL81812.1| Spore cortex-lytic enzyme [Bacillus cereus AH1271]
          Length = 259

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTSNKGNSGGTAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|159045946|ref|YP_001534740.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157913706|gb|ABV95139.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 182

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 66/210 (31%), Gaps = 46/210 (21%)

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
            +  +TL      +  R  QL          L        ++V   A  L  V+  +  L
Sbjct: 9   TMGLATLA--TPAIAQRKFQLDPRFEPTVVPLRYPFQAGQIIVVPQAHYLYWVQPEQKAL 66

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
           R  V VG+   +    ++ I R    P W     +I+++              +      
Sbjct: 67  RYGVGVGKAGLE-FKGNATIKRKAVWPNWRPTDEMIEREP-------------HKYERFA 112

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILF 332
           +                          G  N + +  +     + +  + +H T EP   
Sbjct: 113 DG----------------------VPGGPNNPLGARALYLYQGNVDTYFRIHGTTEPWSI 150

Query: 333 NNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
               R  ++GC+R+   ++IDL   + + T
Sbjct: 151 G---RSVSNGCIRMVNEHVIDLYDRVPRGT 177


>gi|330826784|ref|YP_004390087.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
 gi|329312156|gb|AEB86571.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
          Length = 342

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 1/93 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PE   + L     S  V+ L+ RL  +  L     +   +       V+ FQ  HGL  +
Sbjct: 44  PEPLAQELRHRMESPLVRELQVRLRHAKYLALY-DVDDRYGLKTRETVRKFQKDHGLRET 102

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           G+VD +T + +             N        
Sbjct: 103 GVVDQATWDRLLPRSHKPTAAELGNTDVGPWFT 135



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G +   ++ L+ RL  +G       +   F    + A+  F+ R GL  S ++D  T  
Sbjct: 137 PGQAGY-IRELQHRLRQAGHY--QGAIDGEFHGATQQAISGFRARVGLPASHVMDERTWA 193

Query: 164 A-MNVPVDLRIRQLQVNLMRIKKLLEQKMG---LRYVLVNIPAASLEAVENGKVGLRSTV 219
             +    + R  QL                    R V ++     +  V +G+       
Sbjct: 194 RLIAKTRNPRYAQLFDAPPASTLAQALDPRCATGRVVCISREQKRMSLVVDGRTLFTREA 253

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVI 246
              R   ++     RI  +  +    I
Sbjct: 254 RFARPGWESDKGEFRIWYMNSDTVSTI 280


>gi|260431451|ref|ZP_05785422.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415279|gb|EEX08538.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 188

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPI 330
                + +  + V +   +  ++   Q  G  N + +  +  F +  +TY  +H T +P 
Sbjct: 97  WRPTNEMIERDPVAYAKFKDNDY--VQPGGGDNPLGARALYLFQNGVDTYFRIHGTTQPQ 154

Query: 331 LFNNVVRFETSGCVRVRNI 349
                 R  ++GC+R+ N 
Sbjct: 155 TIG---RAVSNGCIRMLNA 170


>gi|225570400|ref|ZP_03779425.1| hypothetical protein CLOHYLEM_06500 [Clostridium hylemonae DSM
           15053]
 gi|225160771|gb|EEG73390.1| hypothetical protein CLOHYLEM_06500 [Clostridium hylemonae DSM
           15053]
          Length = 421

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V +++E+L +I+G             +    E+AV+ FQ   GL  +
Sbjct: 337 PGYNLEIGASGDKVLQMQEQLNVIAGAYPAIPKITADGVYGPATEAAVRKFQSVFGLPET 396

Query: 155 GMVDSSTLEAMN 166
           G+VD  T   ++
Sbjct: 397 GIVDYRTWYKIS 408


>gi|294500376|ref|YP_003564076.1| hypothetical protein BMQ_3629 [Bacillus megaterium QM B1551]
 gi|294350313|gb|ADE70642.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 186

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 15/108 (13%)

Query: 255 MMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDW----NSPEPPNFIFRQDP--GKIN 306
           ++        Y  +  I ++D    GK      V +    N  +   +     P     N
Sbjct: 40  IINKYYNKLAYFHNGYIEIVDPVATGKTWVKTPVGFFKVVNKIKNRPYYTGHIPAGNPRN 99

Query: 307 AMASTKIEFY----SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +    +         +   +H             + + GC R+ N  
Sbjct: 100 PLGKRWLGINANGTYGDTYGIHGNNNESSIGK---YVSQGCGRMHNAD 144


>gi|257142668|ref|ZP_05590930.1| bacteriophage-acquired protein [Burkholderia thailandensis E264]
          Length = 270

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q    L   G+    T
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAASLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|154686370|ref|YP_001421531.1| CtpA [Bacillus amyloliquefaciens FZB42]
 gi|154352221|gb|ABS74300.1| CtpA [Bacillus amyloliquefaciens FZB42]
          Length = 467

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+S  +V   ++ L   G    S  ++  +D   E AVK FQ +  L  +G++
Sbjct: 376 AKKTYKYGDSGTTVTNAQKMLKALGY---SVKVNGTYDKAFEQAVKQFQAKEKLKQTGII 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIK 184
              T   +   +     QL  N  ++K
Sbjct: 433 TGDTTAKLMTDLQK---QLADNDTQMK 456


>gi|86356949|ref|YP_468841.1| hypothetical protein RHE_CH01309 [Rhizobium etli CFN 42]
 gi|86281051|gb|ABC90114.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 204

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 45/190 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++++ PA     V  G   +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYESAHAPGTIVIDTPARRAYYVLGGNRAMRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ I R    P W    ++ +++                                   
Sbjct: 101 AGNAYIGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y   +     +H T +P          +SGC+R+
Sbjct: 126 -ERYRRLAGGMPGGPNNPLGARAMYLYRGGSDTHFRIHGTNQPESIG---LAMSSGCIRM 181

Query: 347 --RNIIDLDV 354
              ++IDL  
Sbjct: 182 MNHDVIDLYE 191


>gi|304317987|ref|YP_003853132.1| carboxyl-terminal protease [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779489|gb|ADL70048.1| carboxyl-terminal protease [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 455

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +  + +  G++   V+ L+  L + G        +  F      A+  FQ   G+  +G+
Sbjct: 366 VYTKDIKKGDTGNDVKLLQSYLSLLGYYKGEP--NGYFGNDTYDAIVSFQKYAGIPATGV 423

Query: 157 VDSSTLEAMN 166
           +D  T +A++
Sbjct: 424 LDRGTTDALS 433


>gi|328880763|emb|CCA54002.1| hypothetical protein SVEN_0715 [Streptomyces venezuelae ATCC 10712]
          Length = 130

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG----LSVAFDAYVESAVKLFQMRHGLD 152
           +P      G+S + V  L+E +   G     +         F A  +SAV+ FQ  HGL 
Sbjct: 55  IPRYDYSQGDSDICVAGLQELVARFGLTSWEQSGGNFTDGVFGARTDSAVRRFQSNHGLA 114

Query: 153 PSGMVDSSTLEAMNV 167
           P G+V   T E +  
Sbjct: 115 PDGIVGPRTWEKLVT 129


>gi|153938990|ref|YP_001392530.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|152934886|gb|ABS40384.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|295320516|gb|ADG00894.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           230613]
          Length = 231

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 24/89 (26%), Gaps = 13/89 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                + GC+R+  +N+ +L      DTP
Sbjct: 121 SS---SHGCIRMKNKNVAELYKITPLDTP 146



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYY--NGEPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|194363931|ref|YP_002026541.1| peptidoglycan-binding domain 1 protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194346735|gb|ACF49858.1| Peptidoglycan-binding domain 1 protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 665

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 20/121 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSG 155
                 G  S  V++++E+L   G +            F    ++AV+  Q  +GL   G
Sbjct: 463 AELYKQGAHSEGVRKVQEQLGHLGYVGADGKPLVEDGRFGRNTDAAVRQLQKDNGLVVDG 522

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMR-------------IKKLLEQKMGLRYVLVNIPA 202
           +V + TLEA+    D R R L +N  R             ++ L       R+ L +  A
Sbjct: 523 IVGAKTLEAIK---DARERPL-LNDERHPRNPLFIQASKGLELLPAGTFKDRHTLESAAA 578

Query: 203 A 203
           A
Sbjct: 579 A 579


>gi|159046140|ref|YP_001541812.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|159046475|ref|YP_001542145.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157913899|gb|ABV95331.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157914234|gb|ABV95664.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 221

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 42/170 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L+  + L    +    + V+  A  L  +E G   +R  V + + D   P     I R +
Sbjct: 60  LLPQRVLANDGLRPGDIHVDAIARYLYHIEEGGTAMRYGVAIAKGDLYEP-GTYTIRRKV 118

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P+W   +S+I+        +DP+  +                            F   
Sbjct: 119 EWPHWTPTQSMIE--------RDPEAYER---------------------------FADG 143

Query: 300 QDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV 346
            +PG  NA+ S  +  F    +TY  +H TP P       R  +SGCVR+
Sbjct: 144 MEPGPNNALGSRALYLFVGDRDTYLRIHGTPSPRSIG--GRA-SSGCVRM 190


>gi|158422581|ref|YP_001523873.1| ErfK/YbiS/YcfS/YnhG precursor [Azorhizobium caulinodans ORS 571]
 gi|158329470|dbj|BAF86955.1| ErfK/YbiS/YcfS/YnhG precursor [Azorhizobium caulinodans ORS 571]
          Length = 222

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 50/187 (26%), Gaps = 46/187 (24%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             VP +    QL     R             ++++     L  VE     +R  + VGR 
Sbjct: 59  GLVPPEDDEAQLDPAYRRQPVYFRTTEAPGTIIISTSDRFLYLVEGNNRAMRYGIGVGRD 118

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             Q      +I+R    P W  P  +IQ+                               
Sbjct: 119 GFQ-WQGLEKISRKAEWPDWTPPAEMIQRQ------------------------------ 147

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                    P        G  N M +  +        Y +H T +P          +SGC
Sbjct: 148 ---------PYLPRFMAGGPGNPMGARALYL--GQTVYRIHGTNQPETIGY---AVSSGC 193

Query: 344 VRVRNII 350
            R+ N  
Sbjct: 194 FRLVNSD 200


>gi|75910618|ref|YP_324914.1| glycoside hydrolase family protein [Anabaena variabilis ATCC 29413]
 gi|75704343|gb|ABA24019.1| Glycoside hydrolase, family 24 [Anabaena variabilis ATCC 29413]
          Length = 243

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+    V  L+E L+          +   F    E+AVK FQ +  + P G+V+
Sbjct: 4   TETLRKGSKGSEVSELQEILVKLKF--DPGRIDGDFGNKTEAAVKQFQQKQNITPDGVVE 61

Query: 159 SSTLEAMNVPVDLRIRQLQV 178
            +T  A+N  +  +I   ++
Sbjct: 62  INTRNALNKAIQRQIEIAKL 81


>gi|321312058|ref|YP_004204345.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|320018332|gb|ADV93318.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
          Length = 250

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          ++ +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+    T   + 
Sbjct: 229 NGLTADGIYGPKTKAKLK 246


>gi|294497318|ref|YP_003561018.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
 gi|294347255|gb|ADE67584.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
          Length = 256

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 42/168 (25%), Gaps = 59/168 (35%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++N    +L   + GK+     V  GR    TP     I   + N  +           
Sbjct: 32  IIINKSTNTLAFYDRGKLVRTFKVATGRQMSYTPEGTFSIVNKIKNRPYYK--------- 82

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                            ++    +          N +    +  
Sbjct: 83  ---------------------------------DNIRGGD--------PRNPLGDRWLGL 101

Query: 316 YSRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
            +R        +H    P        + +SGC+R+ +  +   WL   
Sbjct: 102 NARGTYGTTYAIHGNNNPSSIGT---YASSGCIRMYD--EEVRWLFDR 144


>gi|21233610|ref|NP_639527.1| hypothetical protein XCC4193 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770575|ref|YP_245337.1| hypothetical protein XC_4282 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188993806|ref|YP_001905816.1| hypothetical protein xccb100_4411 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21115476|gb|AAM43409.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575907|gb|AAY51317.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735566|emb|CAP53784.1| hypothetical protein xcc-b100_4411 [Xanthomonas campestris pv.
           campestris]
          Length = 449

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
           P +    + +G SS  VQ++++ L   G              +   +++AV  +Q  HGL
Sbjct: 217 PFVDDGTIRIGGSSEMVQKVQQTLNAEGYRGADNQPLQEDGVYRLSMQAAVINYQQAHGL 276

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
             +G +D +TL+ +      R    ++N          +
Sbjct: 277 SQTGDIDPATLQQI----APRTFPPELNREDHNATPTYR 311


>gi|257053977|ref|YP_003131810.1| Peptidoglycan-binding domain 1 protein [Halorhabdus utahensis DSM
           12940]
 gi|256692740|gb|ACV13077.1| Peptidoglycan-binding domain 1 protein [Halorhabdus utahensis DSM
           12940]
          Length = 864

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG    +VQ+L+E L   G       +   +      AV  FQ   GL+P+G V   T
Sbjct: 3   LTLGADGEAVQQLQELLAERGY--DVGEIDGEYGRRTRDAVASFQREQGLEPTGSVGPDT 60

Query: 162 LEAMNVPVD 170
            E +++ VD
Sbjct: 61  AEELDLDVD 69


>gi|295706084|ref|YP_003599159.1| endopeptidase [Bacillus megaterium DSM 319]
 gi|294803743|gb|ADF40809.1| Endopeptidase [Bacillus megaterium DSM 319]
          Length = 225

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V++L++ L   G    +            SAVK FQ ++G+   G
Sbjct: 25  ALGDQTLRQGMNHQDVKQLQQTLKNKGYFKGNTTTYFG--TVTTSAVKSFQRKNGIAADG 82

Query: 156 MVDSSTLEAMNVPVD 170
           +V   T   + V   
Sbjct: 83  IVGKGTYAKLGVSAK 97


>gi|226502831|ref|NP_001142095.1| hypothetical protein LOC100274259 [Zea mays]
 gi|194707100|gb|ACF87634.1| unknown [Zea mays]
          Length = 370

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           HLG     + ++++ L   G L P    S    FDA +E A+K++Q   GL  +G++D+S
Sbjct: 56  HLGEQQQGLAKVKDYLSRFGYLPPESSGSFNDVFDADLEEAIKVYQRNFGLGITGVMDAS 115

Query: 161 TLEAMNVP 168
           T+  M  P
Sbjct: 116 TVAQMMAP 123


>gi|295798113|emb|CAX68938.1| ErfK/YbiS/YcfS/YnhG family protein [uncultured bacterium]
          Length = 267

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 54/174 (31%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             G+  + V+     L   ++  +     V  G     TP+    I   + +P W     
Sbjct: 141 NRGVFKIKVDKSENKLRLYQDDALIKTYRVCTGEK-NSTPVGTFTIETKLEDPTW----- 194

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                                       G  +  +                     N + 
Sbjct: 195 ------------------------YKSPGVAIPPKT------------------PENILG 212

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +  + F    +  +H T  P          +SGC+R+  +++ +L   +   T 
Sbjct: 213 TRWMGFSLA-SYGIHGTTLPETIGT---QASSGCIRMLNKDVEELYSIVPLKTK 262


>gi|138895936|ref|YP_001126389.1| protein ErfK/SrfK [Geobacillus thermodenitrificans NG80-2]
 gi|196248827|ref|ZP_03147527.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
 gi|134267449|gb|ABO67644.1| Protein ErfK/SrfK precursor [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211703|gb|EDY06462.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. G11MC16]
          Length = 168

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 29/86 (33%), Gaps = 11/86 (12%)

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD--PG--KINAMASTKIEFY----SRNNTY 322
             +       +  E +   + +  N  +R+   PG    N + +  I F           
Sbjct: 50  YPVATGMNAGLTPEGMFTVTVKAENPYYRKKGIPGGAPNNPLGTRWIGFNARGTDGRIYG 109

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN 348
           +H T  P        + + GCVR+ N
Sbjct: 110 VHGTNNPASIG---GYVSQGCVRMHN 132


>gi|289642266|ref|ZP_06474415.1| NLP/P60 protein [Frankia symbiont of Datisca glomerata]
 gi|289507901|gb|EFD28851.1| NLP/P60 protein [Frankia symbiont of Datisca glomerata]
          Length = 360

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 50/176 (28%), Gaps = 25/176 (14%)

Query: 91  RGGW------PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            G W       E P R L LG+    V RL+ RL I             F       V+ 
Sbjct: 125 DGEWESSDGRQEFPRRSLRLGSQGDPVARLQIRLGIF--------ADGRFGPRTARGVRT 176

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           FQ   GL    +V   T  A+             +   +  LL      +  + +  A +
Sbjct: 177 FQSGAGLTIDAVVGPRTWGALFGASAAPTVSAPASAQPVPALLTTPATAQPAVASTAALT 236

Query: 205 LEAV-----ENGKVGLRSTVIVGRVDRQTPIL------HSRINRIMFNPYWVIPRS 249
           +  V             +   +G+  R              +  +       +PR+
Sbjct: 237 VAPVGASTSVAAAAFAVAQQQIGKPYRYGAAGPNDFDCSGLVKYVYAQVGASVPRT 292


>gi|255525876|ref|ZP_05392804.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|296185117|ref|ZP_06853527.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|255510440|gb|EET86752.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
 gi|296049951|gb|EFG89375.1| SpoIID/LytB domain protein [Clostridium carboxidivorans P7]
          Length = 858

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   PL+LG +   V  L+  LI  G    S      F +  +SAV  FQ   G+  +G 
Sbjct: 777 IAALPLNLGMTGSDVISLQNALIKLGYNISSAT--GYFGSQTKSAVIAFQTSAGIPATGT 834

Query: 157 VDSSTLEAMN 166
           V + T  ++N
Sbjct: 835 VGTWTYSSLN 844


>gi|15895098|ref|NP_348447.1| fused Zn-dependent amidase/peptidase/peptodoglycan-binding
           domain-containing protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15024797|gb|AAK79787.1|AE007691_5 Fusion of predicted Zn-dependent amidase/peptidase (cell wall
           hydrolase/DD-carboxypeptidase family) and
           uncharacterized domain of ErfK family;
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325509236|gb|ADZ20872.1| peptodoglycan-binding domain protein [Clostridium acetobutylicum EA
           2018]
          Length = 281

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 11/102 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              LG+S   V+ ++++L   G    +      F    + AV+ FQ +H +   G V   
Sbjct: 56  VFKLGSSGSDVKSIQDKLNNYGY---AITADGKFGPSTDWAVRDFQYKHNIAMDGSVSDQ 112

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           T+  +N               R+  +++         +   A
Sbjct: 113 TMNLLNQTPTD--------ATRVNSVIQPDPNPDVQSLKAAA 146


>gi|296447920|ref|ZP_06889829.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296254557|gb|EFH01675.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 221

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 56/180 (31%), Gaps = 41/180 (22%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           +     R     +       ++V+     L  VE G   +R  V  G+         + I
Sbjct: 65  VGAAYERYLVDFKTSEPPGSIVVDTKNKFLYFVEGGGKAIRYGVATGQEA-YGWTGRATI 123

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
             +   P W+ P+ ++  +    L+                             + +   
Sbjct: 124 GGMQEWPRWIPPKDML--ERWPHLQ----------------------------PTADAGG 153

Query: 296 FIFRQDPGKINAMASTKIEFYS--RNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                  G  N + S  +  +   ++  Y +H T EP          +SGC+R+R+I  +
Sbjct: 154 LP----GGPDNPLGSRALYLHEGGKDTLYRIHGTNEPDKIGQS---VSSGCIRMRDIDAI 206


>gi|296118595|ref|ZP_06837173.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968494|gb|EFG81741.1| N-acetymuramyl-L-alanine amidase-related protein [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 404

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 22/158 (13%)

Query: 29  KPIHASVLDEIINESYHSIVN-DRFDNFLARVDMGID---SDIPIISKETIAQTEKAIAF 84
           + +        + E+  ++       N+   V        S+        ++   KA   
Sbjct: 13  RILQVGDRSARVAEARATLARLGMLSNYTGDVSDWKRQKFSEEDKHFDSELSDIIKAFQQ 72

Query: 85  YQDILSRGGWPELPIRPLH-----LGNS-----------SVSVQRLRERLIISGDLDPSK 128
            + I+  G   +L +R L      LGN               V +L+++L   G      
Sbjct: 73  SRGIIPSGNIDDLTLRELRQASYKLGNRVLSYQPNNELVGDDVSQLQKQLQELGFYM--A 130

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F ++  +A+  +Q+ +GL   G+   +T+ A++
Sbjct: 131 RIDGHFGSFTHAALLEYQLNYGLQQDGVCGPATIRALS 168



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 68/220 (30%), Gaps = 36/220 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGL------------SVAFDAYVESAVKLFQMRH 149
           L +G+ S  V   R  L   G L    G                FD+ +   +K FQ   
Sbjct: 15  LQVGDRSARVAEARATLARLGMLSNYTGDVSDWKRQKFSEEDKHFDSELSDIIKAFQQSR 74

Query: 150 GLDPSGMVDSSTLEAMNVP-----------------VDLRIRQLQVNLMRIKKLLEQKMG 192
           G+ PSG +D  TL  +                    V   + QLQ  L  +   + +  G
Sbjct: 75  GIIPSGNIDDLTLRELRQASYKLGNRVLSYQPNNELVGDDVSQLQKQLQELGFYMARIDG 134

Query: 193 LRYVLVNIP--AASLEA-VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 +       L   ++   V   +T+    +  +     S  N             
Sbjct: 135 HFGSFTHAALLEYQLNYGLQQDGVCGPATIRALSLLGRRITGGSAHNIQERERVRNAGPK 194

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
           +  K ++     DP     N   ++  +  ++  EE+ W+
Sbjct: 195 LAGKRVV----IDPGLGGSNKGQLVKGRYGQISEEEILWD 230


>gi|218671807|ref|ZP_03521476.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli GR56]
          Length = 207

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 59/188 (31%), Gaps = 42/188 (22%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A  V V    + ++    R K  L        V+++     L  VE      R  + VGR
Sbjct: 15  AQVVRVAQMPKYVKPQFKRKKVRLVTTEAAGTVIIDTNNKYLYLVEGNNRATRYGIGVGR 74

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D        +I R    P W  P  + +++                             
Sbjct: 75  -DGFGWSGIVKIGRKAEWPSWTPPAEMRRRE----------------------------- 104

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                 + +       Q+ G+ N + +  +      R+  + +H T +P      +   +
Sbjct: 105 ------AAKGHIIPAFQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---S 155

Query: 341 SGCVRVRN 348
           SGC+R+ N
Sbjct: 156 SGCIRMMN 163


>gi|217979976|ref|YP_002364123.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217505352|gb|ACK52761.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 205

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 29/176 (16%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRI-------NRIMFNPYWVIPRSIIQK---- 253
            +A + G  G+           QT  L + +       + ++ +P    P +I       
Sbjct: 22  AQAFDGGSSGVVRGAAPASPPTQTASLSTELNRAAQPTHTLVPDPTEEKPGTITVDTKNR 81

Query: 254 --DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP--------G 303
              +     Q  +Y         + +G+        W +  PP  + ++ P        G
Sbjct: 82  YLYLSLEGGQAMRYDVGVGREGFEWQGRAYVGRRAQWPTWTPPAAMLKRRPDLPKTMIGG 141

Query: 304 KINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
             N + +  +  Y+++      +H T EP          +SGC+R+   +I+DL  
Sbjct: 142 VENPLGARAMYLYNKSGDTMFRIHGTNEPDTIGQ---AVSSGCIRLLNEDIVDLYE 194


>gi|229097273|ref|ZP_04228235.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-29]
 gi|228686084|gb|EEL40000.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-29]
          Length = 259

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGSAQENKPPQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|291485022|dbj|BAI86097.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 250

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          ++ +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+    T   + 
Sbjct: 229 NGLTADGIYGPKTKAKLK 246


>gi|78042988|ref|YP_359059.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995103|gb|ABB14002.1| ErfK/YbiS/YcfS/YnhG family protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 143

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 24/99 (24%), Gaps = 7/99 (7%)

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNN-TYMHDT 326
           NN  +                             G     + S  +          +H T
Sbjct: 44  NNQKIKSWPVAVGAPSTPTPTGIYRIKNKISNPGGSPYGVLGSRWMGLTIPGGNYGIHGT 103

Query: 327 PEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
             P       R  + GC+R+ N       L    P WSR
Sbjct: 104 NNPASIG---REVSRGCIRMLNKD--IEELFPQVPLWSR 137


>gi|298290287|ref|YP_003692226.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296926798|gb|ADH87607.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 200

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 63/213 (29%), Gaps = 59/213 (27%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGL---RYVLVNIPAAS--------LEAVENGK 212
           A    +  R +QL  N    K L           Y     P           L  V++G 
Sbjct: 26  APTASLTPRDKQLLANAPYQKVLPPDMYQRAIVDYSGREKPGTIVVDTDKKWLYFVQDGG 85

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             +R  V VG         ++++ R    P W     I Q      +   P +       
Sbjct: 86  KAIRYGVTVGEEG-LAFKGNAKVGRKTEWPTWTPTPEIKQ-----RIAGVPDF------- 132

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEP 329
                                        PG  N M +  +     +++  + +H T +P
Sbjct: 133 ---------------------------VGPGPHNPMGARALYLFQGNKDTLFRIHGTNQP 165

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                     +SGC+R+   ++IDL   + + T
Sbjct: 166 EYIGQ---AISSGCIRMLNEDVIDLYTRVPQGT 195


>gi|313891875|ref|ZP_07825480.1| NlpC/P60 family protein [Dialister microaerophilus UPII 345-E]
 gi|313119869|gb|EFR43056.1| NlpC/P60 family protein [Dialister microaerophilus UPII 345-E]
          Length = 251

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G   +      +GNS   V+ ++ +L+  G       +   +    E+AV++FQ R  L 
Sbjct: 17  GTGYIGNSAYKIGNSGEIVKLIQRKLVKQG---IKIEIDGKYGKDTENAVRIFQKRKKLK 73

Query: 153 PSGMVDSSTLEAM 165
             G++   T  A+
Sbjct: 74  VDGIIGEETYFAL 86


>gi|228989877|ref|ZP_04149854.1| hypothetical protein bpmyx0001_6440 [Bacillus pseudomycoides DSM
           12442]
 gi|228769812|gb|EEM18398.1| hypothetical protein bpmyx0001_6440 [Bacillus pseudomycoides DSM
           12442]
          Length = 253

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   K +    E +    N  +   +  +  PG    N + +  + 
Sbjct: 35  LSFFENGNYVRTFPVTTGKRQTPTPEGIFCIINKYKNKEYHRKNIPGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             +     +H T          R E++GC+R+ +
Sbjct: 95  L-NEKEYAIHGTNREGTIG---RRESNGCIRMHD 124


>gi|328957385|ref|YP_004374771.1| carboxy-terminal processing protease [Carnobacterium sp. 17-4]
 gi|328673709|gb|AEB29755.1| carboxy-terminal processing protease [Carnobacterium sp. 17-4]
          Length = 497

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   L + S  V+ L + L   G   P + +   FD   E AVK FQ    L   G+V 
Sbjct: 404 SKTYQLKDVSAEVENLEKVLEALGY--PVESVDGYFDESTEEAVKQFQTDKKLPVDGIVT 461

Query: 159 SSTLEAMNVPVDLRIR 174
             T   +   +   I 
Sbjct: 462 GETATQLIESLRTLID 477


>gi|61680534|pdb|1Y7M|A Chain A, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A
           Resolution
 gi|61680535|pdb|1Y7M|B Chain B, Crystal Structure Of The B. Subtilis Ykud Protein At 2 A
           Resolution
          Length = 164

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 51/154 (33%), Gaps = 12/154 (7%)

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRIN--RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
             +     +    + +  P L + +   + +  P    P +I     +++  +      +
Sbjct: 13  NSIAADFRISTAALLQANPSLQAGLTAGQSIVIPGLPDPYTIPYHIAVSIGAKTLTLSLN 72

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
           N +     K   + V ++   +P    +I  +         +  +   + +   +H T  
Sbjct: 73  NRV----XKTYPIAVGKILTQTPTGEFYIINRQRNPGGPFGAYWLSLSAAH-YGIHGTNN 127

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           P          + GC+R  N  +I+L   +   T
Sbjct: 128 PASIGK---AVSKGCIRXHNKDVIELASIVPNGT 158


>gi|300024175|ref|YP_003756786.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525996|gb|ADJ24465.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 356

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 50/181 (27%), Gaps = 50/181 (27%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L  +      +   V V + D +     + +     NP W     +++         
Sbjct: 67  DRRLYFITKQGEAITYPVAVPKGDAR-WQGVTSVTNKRVNPPWTPTPDMVR--------- 116

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNN 320
                                           P        G  +N +    +   S   
Sbjct: 117 ------------------------------SNPRLPRWVPGGHPMNPLGIRALYLGSS-T 145

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL---LKDTPTWSRYHIEEVVKTR 375
             +H T  P          +SGC+R+ N  ++DL   +   ++ T TW ++     + ++
Sbjct: 146 YRIHGTDAPWTIGQ---AVSSGCIRMTNQDVLDLYPRVPVGMRVTVTWQQFKTGSAISSK 202

Query: 376 K 376
            
Sbjct: 203 S 203


>gi|229083982|ref|ZP_04216278.1| hypothetical protein bcere0022_6300 [Bacillus cereus Rock3-44]
 gi|228699272|gb|EEL51961.1| hypothetical protein bcere0022_6300 [Bacillus cereus Rock3-44]
          Length = 238

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNI--HMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N         GK             N  +   +  ++ PG    N + +  + 
Sbjct: 20  LSFFENGNYIKTFPVTTGKRQTPTPEGTFCIINKYKNKEYHRKKIPGGAPNNPLGTRWLG 79

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             +     +H T          R E++GC+R+ +
Sbjct: 80  L-NEKEYAIHGTNREGTIG---RRESNGCIRMHD 109


>gi|290962481|ref|YP_003493663.1| serine-threonine protein kinase [Streptomyces scabiei 87.22]
 gi|260652007|emb|CBG75139.1| putative serine-threonine protein kinase [Streptomyces scabiei
           87.22]
          Length = 621

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSST 161
             G+S   V++++  L   G      G+S  FDA  ++AV+ FQ    L    G V    
Sbjct: 554 RPGDSGDRVRQVQCMLSKRGYSLGPGGVSGEFDAGTKAAVQSFQRARQLVVKDGTVRPRV 613

Query: 162 LEAMNVP 168
             A+   
Sbjct: 614 WRALRST 620


>gi|304404313|ref|ZP_07385975.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
 gi|304347291|gb|EFM13123.1| spore cortex-lytic enzyme [Paenibacillus curdlanolyticus YK9]
          Length = 261

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                 + +G+S   V  L+ RL   G       +   F     +AVK FQ + G+   G
Sbjct: 33  TFSSATIKMGSSGKDVYELQGRLKFLGFYS--GKVDGNFGTTTLNAVKWFQWKFGMTADG 90

Query: 156 MVDSS 160
           +V + 
Sbjct: 91  VVGAK 95


>gi|196248696|ref|ZP_03147396.1| spore cortex-lytic enzyme [Geobacillus sp. G11MC16]
 gi|196211572|gb|EDY06331.1| spore cortex-lytic enzyme [Geobacillus sp. G11MC16]
          Length = 263

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G       + +  G     V  L+ RL   G       +   F      A++ FQ ++G
Sbjct: 20  AGDAAAFSPQVIQRGAVGDDVIELQARLQYLGFYK--GKIDGVFGWGTYWALRNFQQKYG 77

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+  + T   +  
Sbjct: 78  LPVDGLAGAETKRKLVK 94


>gi|147676430|ref|YP_001210645.1| hypothetical protein PTH_0095 [Pelotomaculum thermopropionicum SI]
 gi|146272527|dbj|BAF58276.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 185

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 6/64 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
                + +  +          +H T  P        + ++GC+R+   ++ +L   +   
Sbjct: 58  NPGGVLGTRWMGLSIPGGRYGIHGTNNPSSIG---GYVSNGCIRMFNEDVEELFAKVEIG 114

Query: 360 TPTW 363
           TP  
Sbjct: 115 TPVE 118



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           ++L+N+    L   E  ++     V VG+    TP     I   + NP  
Sbjct: 12  HILINLATRQLSYFEGSRLMNTYPVGVGKPSTPTPTGKYSIIEKIMNPGG 61


>gi|138895808|ref|YP_001126261.1| sporulation specific N-acetylmuramoyl-L-alanineamidase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267321|gb|ABO67516.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Geobacillus thermodenitrificans
           NG80-2]
          Length = 263

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 2/77 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G       + +  G     V  L+ RL   G       +   F      A++ FQ ++G
Sbjct: 20  AGDAAAFSPQVIQRGAVGDDVIELQARLQYLGFYK--GKIDGVFGWGTYWALRNFQQKYG 77

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+  + T   +  
Sbjct: 78  LPVDGLAGAETKRKLVK 94


>gi|260588566|ref|ZP_05854479.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
 gi|260541041|gb|EEX21610.1| spore cortex-lytic enzyme SleC [Blautia hansenii DSM 20583]
          Length = 421

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPS 154
           P +PL +G+S   +++++E+L  I+        +S    F    ++AVK FQ   GL  +
Sbjct: 337 PGQPLDIGSSGSKIRQIQEQLNAIANAYPALPKISVDGVFGENTQNAVKKFQQIFGLPAT 396

Query: 155 GMVDSSTLEAMN 166
           G++D ST   + 
Sbjct: 397 GIIDYSTWYEIQ 408


>gi|167465177|ref|ZP_02330266.1| cell wall hydrolase, SleB [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 216

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 5/167 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L++G  S  V  L+ERL   G      G++  +    + AV+ FQ  +GL  +G  D
Sbjct: 29  AMTLNIGTQSEHVLNLQERLSSLGYFKK--GITGYYGKITKEAVRDFQKAYGLSVTGSAD 86

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
           S+TL  +N     +  Q+ ++ +      E +       V + A  L  V++       T
Sbjct: 87  SATLAKLNQMAGSK--QITLDKLARIIYAEARGESFKGQVAVGAVVLNRVQSNAFPDSIT 144

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
            ++ +  + + I       +  N                       Y
Sbjct: 145 EVIFQPGQFSAI-RDGQYSLKPNQAAYDAARSALNGWDPTGGALYYY 190


>gi|119493546|ref|ZP_01624211.1| hypothetical protein L8106_25882 [Lyngbya sp. PCC 8106]
 gi|119452600|gb|EAW33782.1| hypothetical protein L8106_25882 [Lyngbya sp. PCC 8106]
          Length = 196

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 10/145 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSS 160
           L LG +  +V+  ++R I +G      G +  +   +++AV+ FQ  + GL   G++  +
Sbjct: 41  LKLGAAGEAVRFAQQRFIANGY---RIGFNGQYGPQMKAAVEHFQRNYGGLVVDGIIGEN 97

Query: 161 TLEAM-NVPVDLRI--RQLQVNLMRIKKLLEQKMGLRYVLVNIPA---ASLEAVENGKVG 214
           T   + +   + R   R  +V     K   +  M   Y      A     L   +NG   
Sbjct: 98  TWRVLCDGDAEFRRLGRTFRVRFQTTKYPYDVNMPELYQGSVGDAVECLQLRLYDNGFFL 157

Query: 215 LRSTVIVGRVDRQTPILHSRINRIM 239
               +   +          R    +
Sbjct: 158 FIDGIFGPKTLEVVKAFQRREGLKV 182



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+   +V+ L+ RL  +G       +   F       VK FQ R GL   G+V   T   
Sbjct: 137 GSVGDAVECLQLRLYDNGFFLF---IDGIFGPKTLEVVKAFQRREGLKVDGIVGVQTWRK 193

Query: 165 MN 166
           + 
Sbjct: 194 LG 195


>gi|284046149|ref|YP_003396489.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283950370|gb|ADB53114.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 329

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L  G S   V+ L++ L  +G    S  +   F +  +  VK FQ    L  +G
Sbjct: 107 SLGDRVLKKGMSGQDVRVLQDYLNRAGF---STTIDGQFGSGTQRLVKRFQQAQELTVTG 163

Query: 156 MVDSSTLEAMNV 167
           +VD++T+ A+  
Sbjct: 164 IVDAATVTALRK 175



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V+ L++ L  +G   P  G    F       VK F+ ++ L   G+ DS
Sbjct: 20  RTLKQGMSGQDVRVLQDFLTRAGFTTPVGGD---FGPITLGNVKKFEKQYRLTVDGIADS 76

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           + +  +    D R    +  +        + +G R +   +    +  +++
Sbjct: 77  AFVTKLREVADPRGNSTRTRVKGNATATARSLGDRVLKKGMSGQDVRVLQD 127


>gi|86748964|ref|YP_485460.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86571992|gb|ABD06549.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 263

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 57/203 (28%), Gaps = 46/203 (22%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q R+             +   +         +     +     +K G   ++V+ P   L
Sbjct: 88  QRRYLPPMDPQAPMQMRQQEAIDPARPAFDPRYEKQIVDYQGNEKPGT--IVVDTPNKFL 145

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
             V+     LR  + VGR    T      I+     P W  P+ ++ +            
Sbjct: 146 YLVQGDGRALRYGIGVGRPG-FTWSGVKTISAKREWPSWTPPKEMLARR----------- 193

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
                                       P+     + G  N + +  +   S     +H 
Sbjct: 194 ----------------------------PDLPRFMEGGPENPLGARAMYLGSS-LYRIHG 224

Query: 326 TPEPILFNNVVRFETSGCVRVRN 348
           + EP          +SGC+R+RN
Sbjct: 225 SNEPWTIGTN---VSSGCIRMRN 244


>gi|169335886|ref|ZP_02863079.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258624|gb|EDS72590.1| hypothetical protein ANASTE_02319 [Anaerofustis stercorihominis DSM
           17244]
          Length = 214

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 4/80 (5%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +Y+ + + GG P      +  G+    V++ + RLI  G           F +  E+AVK
Sbjct: 135 YYRSVRTFGGSPAY-YPIIAKGSRGAYVKKAQNRLIKKGY---KISADGIFGSSTENAVK 190

Query: 144 LFQMRHGLDPSGMVDSSTLE 163
            FQ +  +   G+V  +T +
Sbjct: 191 RFQKKSEITVDGIVGKNTWK 210


>gi|257869674|ref|ZP_05649327.1| carboxyl-terminal protease [Enterococcus gallinarum EG2]
 gi|257803838|gb|EEV32660.1| carboxyl-terminal protease [Enterococcus gallinarum EG2]
          Length = 473

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + L  G SS +V RL + L   G     +     FD    SAV+  Q +  L+ +
Sbjct: 383 PLPRDKELKEGQSSEAVDRLNQFLSALGY----RTTGDTFDQTTVSAVQAVQQKAELEVT 438

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G V++ T +A+   V  +++Q
Sbjct: 439 GKVNAETAQAIEKAVTDQLKQ 459


>gi|218530237|ref|YP_002421053.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240138595|ref|YP_002963067.1| hypothetical protein MexAM1_META1p1980 [Methylobacterium extorquens
           AM1]
 gi|254561191|ref|YP_003068286.1| hypothetical protein METDI2768 [Methylobacterium extorquens DM4]
 gi|218522540|gb|ACK83125.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240008564|gb|ACS39790.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Methylobacterium extorquens AM1]
 gi|254268469|emb|CAX24426.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Methylobacterium extorquens DM4]
          Length = 171

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 47/181 (25%), Gaps = 44/181 (24%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R        +G   ++V      L  V      +R  V VG+  +Q     ++I+   + 
Sbjct: 28  REVVPFADGLGAGTIVVRTTERRLYLVNGDGTAIRYPVAVGKPGKQ-WSGATQIDGKYYQ 86

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  + +                                        P      + 
Sbjct: 87  PDWSPPAEVKRD--------------------------------------NPRLPNLIRG 108

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
               N M    +         +H T  P        F + GC+R+ N  D+     + T 
Sbjct: 109 GSPSNPMGVAAMTLRGGE-YAIHGTNRPNSIGT---FASYGCIRMYN-QDIADLFGRVTV 163

Query: 362 T 362
            
Sbjct: 164 G 164


>gi|152975663|ref|YP_001375180.1| spore cortex-lytic enzyme SleB [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152024415|gb|ABS22185.1| Spore cortex-lytic enzyme SleB [Bacillus cytotoxicus NVH 391-98]
          Length = 247

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   
Sbjct: 31  QAFSNQVIQRGASGEDVIELQSRLKYNGYY--TGKVDGVFGWGTYWALRNFQQKFGLKVD 88

Query: 155 GMVDSST 161
           G+    T
Sbjct: 89  GLAGPKT 95


>gi|302556454|ref|ZP_07308796.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302474072|gb|EFL37165.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 113

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           PE+P    L  G++   V  L+ RL+    +     ++  +D  V  AV  FQ  +G+  
Sbjct: 35  PEIPGTGLLRPGDTGHGVYELQVRLLQIPHIYDGGAINGRYDTEVRQAVARFQNAYGIHG 94

Query: 154 S--GMVDSSTLEAM 165
              G+   +T  A+
Sbjct: 95  DETGIYGDNTRHAL 108


>gi|295398972|ref|ZP_06808954.1| spore cortex-lytic enzyme [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110421|ref|YP_003988737.1| spore cortex-lytic enzyme [Geobacillus sp. Y4.1MC1]
 gi|294978438|gb|EFG54034.1| spore cortex-lytic enzyme [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215522|gb|ADP74126.1| spore cortex-lytic enzyme [Geobacillus sp. Y4.1MC1]
          Length = 275

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G     V  L+ RL   G    +  +   F      AV+ FQ  +GL   
Sbjct: 33  KAFSNQVIQRGAVGDDVIELQARLQYIGFY--NGKIDGVFGWRTYWAVRNFQYEYGLPVD 90

Query: 155 GMVDSSTLEAMNV 167
           G+V  ST   +  
Sbjct: 91  GLVGESTKAKLVK 103


>gi|284034144|ref|YP_003384075.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
 gi|283813437|gb|ADB35276.1| Zinc D-Ala-D-Ala carboxypeptidase [Kribbella flavida DSM 17836]
          Length = 255

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
            R L  G S   V++L+ R  ++G            AF    ++AV  FQ  +GL   G+
Sbjct: 48  SRTLSEGASGEDVRQLQVR--VAGYPGYGGHLAADGAFGPATKAAVTRFQQAYGLAADGI 105

Query: 157 VDSSTLEAM 165
             S+T   +
Sbjct: 106 AGSATFSKL 114


>gi|86749040|ref|YP_485536.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86572068|gb|ABD06625.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 406

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 60/198 (30%), Gaps = 48/198 (24%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   +  QL  +L R +     K     ++V+     L  +      +R  V VGR D
Sbjct: 199 EQPDADQEFQLPQHLRRQEVAFPTKEPAGTIVVDTGNTYLYYILGNGRAMRYGVRVGR-D 257

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +++R    P W  P  +I++                                
Sbjct: 258 GFTWNGVQKVSRKAEWPDWHPPTEMIERQ------------------------------- 286

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 287 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 333

Query: 345 RV--RNIIDLDVWLLKDT 360
            +   ++ DL   +   T
Sbjct: 334 GMLNDDVSDLFERVKVGT 351


>gi|188581741|ref|YP_001925186.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179345239|gb|ACB80651.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 225

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 44/162 (27%), Gaps = 44/162 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              +     ++V+     L  V      +R  V VGR    T    ++I      P W  
Sbjct: 89  FNGRYAPGTIVVSTAERRLYYVLPDGQAIRYGVGVGRPG-FTWSGVNKITAKREWPGWTP 147

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P +++ +                                        P+       G  N
Sbjct: 148 PAAMLARR---------------------------------------PDLPRYMAGGIEN 168

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  +         +H + EP          +SGC+R+ N
Sbjct: 169 PLGARAMYIGKSE-YRIHGSNEPDTIGQ---AVSSGCIRMTN 206


>gi|326391827|ref|ZP_08213343.1| carboxyl-terminal protease [Thermoanaerobacter ethanolicus JW 200]
 gi|325992133|gb|EGD50609.1| carboxyl-terminal protease [Thermoanaerobacter ethanolicus JW 200]
          Length = 457

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G+    V+ L++ L I      +      F     +AVK  Q + GL P+G+ D 
Sbjct: 370 GTLRVGSRGNDVKILQKNLNILKF--NAGPEDGIFGPKTANAVKELQKKAGLTPTGVFDK 427

Query: 160 STLEAMNV 167
           +T +A+  
Sbjct: 428 NTYDALVK 435


>gi|258514598|ref|YP_003190820.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257778303|gb|ACV62197.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 411

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 52/197 (26%), Gaps = 65/197 (32%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +++N     L   +N ++     V  GR    TP    +I   +                
Sbjct: 30  IIINKQNNKLAFYQNNQLVKIFPVATGREPSYTPEGSFKIINKII--------------- 74

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIE 314
                 +P Y+                                + D G   N + +  + 
Sbjct: 75  ------NPYYI------------------------------KLKIDGGAPDNPLGNRWMG 98

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI----- 368
             +      +H    P        + + GC+R+ N   +  WL +  P  +   I     
Sbjct: 99  LNAGGGTYGIHGNSNPASIGT---YASGGCIRMSNNDVI--WLYERIPIGTPVEIINYSM 153

Query: 369 --EEVVKTRKTTPVKLA 383
             +  +   +   + + 
Sbjct: 154 DFDNNLLDGERRDIIVK 170


>gi|217978437|ref|YP_002362584.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217503813|gb|ACK51222.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 200

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 49/174 (28%), Gaps = 46/174 (26%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 V+V+     L  V      ++  V VGR    T     ++  +   P W  P  
Sbjct: 66  DQPGGTVVVSTSERKLNYVLGDGTAIQYGVGVGREG-FTWSGTKKVTMVREWPGWTPPSQ 124

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           ++++                                        P+       G  N + 
Sbjct: 125 MLKRR---------------------------------------PDLPRYMPGGIDNPLG 145

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           +  I   S     +H + EP          +SGC+R+ N  + DL   +   T 
Sbjct: 146 ARAIYLGSS-LYRIHGSNEPETIGA---AVSSGCIRMTNEDVTDLAARVKVGTK 195


>gi|162456517|ref|YP_001618884.1| hypothetical protein sce8234 [Sorangium cellulosum 'So ce 56']
 gi|161167099|emb|CAN98404.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 834

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G     V+  ++ L    +G L         F A  E+A ++FQ   GL  +G
Sbjct: 392 PGGGLARGAKGPEVKAWQQHLLTWRAGLLPRFGADGE-FGAETEAATRIFQQEMGLPVTG 450

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
            V   T EAM   +      L++     + L+
Sbjct: 451 AVGPETREAMQRALPRPPCALELPRALGRALM 482


>gi|146339182|ref|YP_001204230.1| putative ErfK/YbiS/YcfS/YnhG signal peptide [Bradyrhizobium sp.
           ORS278]
 gi|146191988|emb|CAL75993.1| conserved hypothetical protein, putative ErfK/YbiS/YcfS/YnhG
           precursor; putative signal peptide [Bradyrhizobium sp.
           ORS278]
          Length = 226

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 16/94 (17%)

Query: 297 IFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IID 351
                PG  N M S  +      ++  + +H T +P          +SGC+R+ N   ID
Sbjct: 131 PTFVAPGPDNPMGSRAMYLYANGKDTLFRIHGTNQPEYIGAS---ISSGCIRLTNEDAID 187

Query: 352 LDV--------WLLKDTPTWSRYHIEEVVKTRKT 377
           L           +L      S Y  +  ++   T
Sbjct: 188 LYNRVKVGTIVVVLDPKKGDSPYKPQMALQGGGT 221


>gi|326201826|ref|ZP_08191697.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
 gi|325988426|gb|EGD49251.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium papyrosolvens DSM
           2782]
          Length = 123

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 14/116 (12%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           SI     +  L      +   N  +    GK      V                      
Sbjct: 15  SITINRSLHKLTLYRDSIVFKNYPVAV--GKPSTPTPVGTFRIVNRAI------NPGGPF 66

Query: 309 ASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            +  +   + N    +H T  P          ++GC+R+ N  +I+L   +   T 
Sbjct: 67  GARWLGLNAPNCDYGIHGTNNPSSIGKD---VSNGCIRMFNEQVIELSNLVSIGTV 119


>gi|188581211|ref|YP_001924656.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179344709|gb|ACB80121.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 171

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 45/175 (25%), Gaps = 44/175 (25%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R      + +G   ++V      L  V      +R  V VG+  +Q     + I+   +
Sbjct: 27  AREIVPFAEGVGAGTIVVRTTERRLYLVNGDGTAIRYPVAVGKPGKQ-WSGATHIDGKYY 85

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P  + +                                        P      +
Sbjct: 86  QPDWSPPAEVKRDH--------------------------------------PRLPNLIR 107

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                N M    +         +H T  P        F + GC+R+ N  D+   
Sbjct: 108 GGSPSNPMGVAAMTLRGGE-YAIHGTNRPSSIGT---FASYGCIRMYN-QDIADL 157


>gi|225166762|ref|YP_002650747.1| hypothetical protein pC2C203U28_p029 [Clostridium botulinum]
 gi|253771405|ref|YP_003034242.1| peptidoglycan binding domain protein [Clostridium botulinum D str.
           1873]
 gi|225007426|dbj|BAH29522.1| conserved hypothetical protein [Clostridium botulinum]
 gi|253721382|gb|ACT33675.1| peptidoglycan binding domain protein [Clostridium botulinum D str.
           1873]
          Length = 266

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V +L++ L   G       +   F    ++ VK FQ  +GL  +G+VD  T
Sbjct: 2   LKQGDRGANVSKLQKTLKYLGY--SCGKIDGIFGESTKNQVKRFQKHNGLPANGIVDVVT 59


>gi|307265061|ref|ZP_07546621.1| carboxyl-terminal protease [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919859|gb|EFN50073.1| carboxyl-terminal protease [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 457

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L +G+    V+ L++ L I      +      F     +AVK  Q + GL P+G+ D 
Sbjct: 370 GTLKVGSRGNDVKILQKNLNILKF--NAGPEDGIFGPKTANAVKELQKKAGLTPTGVFDK 427

Query: 160 STLEAMNV 167
           +T +A+  
Sbjct: 428 NTYDALVK 435


>gi|297617582|ref|YP_003702741.1| 3D domain protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145419|gb|ADI02176.1| 3D domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 290

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 32/90 (35%), Gaps = 14/90 (15%)

Query: 78  TEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           T +A+  YQ             R L  G +   V RL+E L   G L         F   
Sbjct: 98  TRRALDAYQ------------PRLLFEGCTGADVTRLQETLKERGYLTGDA--DGKFGPE 143

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              AV  FQ  + L+   +V   T +A+  
Sbjct: 144 TRKAVLAFQKANSLEADAIVGPLTRQALAQ 173



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L++G     V RL+  L + G           F    + AV   Q  +     G+V  
Sbjct: 39  RNLYVGCEGEDVARLQNTLNLKGYYCGPA--DQKFGVKTQKAVLALQQENACRVDGIVGP 96

Query: 160 STLEAMNV 167
            T  A++ 
Sbjct: 97  ETRRALDA 104


>gi|168333614|ref|ZP_02691874.1| spore cortex-lytic enzyme SleC [Epulopiscium sp. 'N.t. morphotype
           B']
          Length = 145

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   + +GN   +V+ ++E   R+  S  L P    +  F    E A+K+FQ    L 
Sbjct: 59  SFPGYSIKIGNEGAAVRTIQEQLNRISQSYPLIPKVPSNGVFGEKTEEAIKVFQKVFYLA 118

Query: 153 PSGMVDSSTL 162
           P G+V  +T 
Sbjct: 119 PDGVVGKATW 128


>gi|167629767|ref|YP_001680266.1| peptidoglycan binding domain 1, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167592507|gb|ABZ84255.1| peptidoglycan binding domain 1, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 230

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           + +    P+   R L+ G S   VQ+L+  L   G           F A    A+K FQ 
Sbjct: 22  LTALAATPQFGSRQLYRGVSGADVQQLQGYLKEMGYFAEEPT--GYFGAITFDALKQFQA 79

Query: 148 RHGLDPSGMVDSSTLEAMN 166
              L   G+    T +A+ 
Sbjct: 80  YRDLIIDGVAGPQTFKALR 98


>gi|16079624|ref|NP_390448.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221310497|ref|ZP_03592344.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314821|ref|ZP_03596626.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319743|ref|ZP_03601037.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324021|ref|ZP_03605315.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1730978|sp|P54450|CWLH_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase CwlH; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|1303785|dbj|BAA12441.1| YqeE [Bacillus subtilis]
 gi|2635016|emb|CAB14512.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 250

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          ++ +L++ L +          + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNILQLQKALAVLHFYPDKGAKNNGIDGVYGPKTANAVKRFQLM 228

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+    T   + 
Sbjct: 229 NGLTADGIYGPKTKAKLK 246


>gi|329928325|ref|ZP_08282196.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
 gi|328937882|gb|EGG34287.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
          Length = 223

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 15/104 (14%)

Query: 268 DNNIHMIDEKGKEVFVEEV---DWNSPEP-PNFIFRQDP---GKINAMASTKIEFYSRNN 320
           + +  ++ E G+ +    V   + ++P P  +F  +      G   +     I       
Sbjct: 42  ERHKLLVREHGQIIKTYSVAVGNPSTPTPVGDFRVKYKGTNWGP--SFGPRWIGLNVPWG 99

Query: 321 -TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
              +H T +P          + GC+R+ N  +I+L   +   T 
Sbjct: 100 NFGIHGTNKPYSIGQ---HLSHGCIRMHNKDVIELYELIPIGTK 140



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    VQ ++ RL  +G    +      F      ++K +Q  H L P+G+V S  
Sbjct: 158 LAEGDVGGDVQLIQSRLKSAGYY--NGECDGKFRFNTTESLKKYQRDHHLIPNGVVSSKE 215

Query: 162 LEAMN 166
            E + 
Sbjct: 216 YEELG 220


>gi|289667240|ref|ZP_06488315.1| hypothetical protein XcampmN_01617 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 427

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 9/117 (7%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              L  G     V++L+ +L   G +            F    + AV+ FQ   GL   G
Sbjct: 209 DDKLEQGERGEQVKQLQSQLAQLGAVGCDGKPPHADGDFGGNTKYAVEQFQRERGLQVDG 268

Query: 156 MVDSSTLEAMNV-----PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           +V S    A++              + V   R   L + +      + N   + LEA
Sbjct: 269 VVGSQAQAALSQALSQHTAKQTAAPMNVPQTRSPLLSDPRHPENA-MYNGAVSKLEA 324


>gi|153939027|ref|YP_001390990.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. Langeland]
 gi|152934923|gb|ABS40421.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. Langeland]
 gi|295319049|gb|ADF99426.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. 230613]
          Length = 155

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI  G    S G    F      AV+ FQ    L   G V   T 
Sbjct: 85  RQGARGEITKTIQQMLINIGYPVGSYGADGVFGNGTVIAVEAFQRDCNLALDGTVGKDTW 144

Query: 163 EAM 165
           +A+
Sbjct: 145 KAL 147


>gi|163851429|ref|YP_001639472.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163663034|gb|ABY30401.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 171

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 45/174 (25%), Gaps = 44/174 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R        +G   ++V      L  V      +R  V VG+  +Q     ++I+   + 
Sbjct: 28  REVVPFADGLGAGTIVVRTTERRLYLVNGDGTAIRYPVAVGKPGKQ-WSGATQIDGKYYQ 86

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  + +                                        P      + 
Sbjct: 87  PDWSPPAEVKRD--------------------------------------NPRLPNLIRG 108

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
               N M    +         +H T  P        F + GC+R+ N  D+   
Sbjct: 109 GSPSNPMGVAAMTLRGGE-YAIHGTNRPNSIGT---FASYGCIRMYN-QDIADL 157


>gi|150397160|ref|YP_001327627.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150028675|gb|ABR60792.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 229

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 59/207 (28%), Gaps = 49/207 (23%)

Query: 151 LDPSGMVDSSTLEAMNVPVDL------RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           L  + + DS T + +N           R  Q+     R             ++++     
Sbjct: 34  LAQTQIYDSKTKKWVNYDKRKARQYFSRNNQVPEAFRRQMVPFRTAEVPGTIIIDGNQHF 93

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V+ G   +R  + VGR          R+ R    P W  P  ++ +           
Sbjct: 94  LYLVQPGGQAIRYGIGVGREG-FGWAGIVRVGRRAEWPTWTPPAEMVAR----------- 141

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN--TY 322
                                  W              G  N + +  +  Y  ++   Y
Sbjct: 142 -----------------DPNAAKWAGG--------MPGGPDNPLGARALYLYEGDSDTIY 176

Query: 323 -MHDTPEPILFNNVVRFETSGCVRVRN 348
            +H T EP          +SGC+R+ N
Sbjct: 177 RIHGTVEPWTIG---LDVSSGCIRMNN 200


>gi|228997686|ref|ZP_04157293.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock3-17]
 gi|229009044|ref|ZP_04166383.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock1-4]
 gi|228752214|gb|EEM01903.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock1-4]
 gi|228762030|gb|EEM10969.1| Spore cortex-lytic enzyme [Bacillus mycoides Rock3-17]
          Length = 251

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 10/149 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   
Sbjct: 31  QAFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVD 88

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+  + T + M V      +       +     +     +    N+P           + 
Sbjct: 89  GLAGAKT-KQMLVKATKYEKS---TANKGNTGGQSNKPAQNKGTNVPNG----YSQNDIQ 140

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L +  + G    +  +    +  ++ N  
Sbjct: 141 LMANAVYGESRGEPYLGQVAVAAVILNRV 169


>gi|228991584|ref|ZP_04151528.1| Spore cortex-lytic enzyme [Bacillus pseudomycoides DSM 12442]
 gi|228768153|gb|EEM16772.1| Spore cortex-lytic enzyme [Bacillus pseudomycoides DSM 12442]
          Length = 251

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 10/149 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   
Sbjct: 31  QAFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVD 88

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+  + T + M V      +       +     +     +    N+P           + 
Sbjct: 89  GLAGAKT-KQMLVKATKYEKS---TANKGNTGGQSNKPAQNKGTNVPNG----YSQNDIQ 140

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L +  + G    +  +    +  ++ N  
Sbjct: 141 LMANAVYGESRGEPYLGQVAVAAVILNRV 169


>gi|160902066|ref|YP_001567647.1| ErfK/YbiS/YcfS/YnhG family protein [Petrotoga mobilis SJ95]
 gi|160359710|gb|ABX31324.1| ErfK/YbiS/YcfS/YnhG family protein [Petrotoga mobilis SJ95]
          Length = 389

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 296 FIFRQDPGK-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +     PG  +N M +  ++  +     +H T +P          + GC+R+ N
Sbjct: 313 YDEYIPPGSLMNGMGTRWLQLSNPQ-YGIHGTTKPWEIGKR---ISHGCIRMFN 362


>gi|312879709|ref|ZP_07739509.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
           12260]
 gi|310783000|gb|EFQ23398.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
           12260]
          Length = 198

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 32/101 (31%), Gaps = 6/101 (5%)

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGK-INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           +V     D +        F +          S  I FY+     +H T  P       R 
Sbjct: 84  KVRRVLQDASQLVYDPAWFDEPGEPQKGVYGSKLISFYNPWQIAIHGTNSPRSVG---RR 140

Query: 339 ETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTRKT 377
            T GC+R++N  I  L  ++      W      +     KT
Sbjct: 141 ATHGCIRMKNRDINTLVAYVKPGMKIWIVGKDGKAPPGGKT 181


>gi|251779050|ref|ZP_04821970.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243083365|gb|EES49255.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 791

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 15/151 (9%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD----LDPSK 128
           +     +K +     I   G     P  PL L + + +V+ ++++L         +    
Sbjct: 298 QYYFGYDKTLVRATMIE--GIPESYPGTPLRLNDENNNVKVIQKQLNRISKNFPAIPKIP 355

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN---VPVDLRIRQLQVNLMRIKK 185
             +  FD   E AVK+FQ    L   G+V  +T   ++   V V       Q   +  + 
Sbjct: 356 YENGKFDKITEDAVKVFQKVFNLTQDGIVGRATWYRISSIYVGVKRLAELDQEPEIDGEN 415

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
                 G        P   L+    G+    
Sbjct: 416 PPPDSGGEY------PGYLLKYGSRGEKVKE 440



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 38/123 (30%), Gaps = 13/123 (10%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       P+      F    + AV  FQ   GL P G
Sbjct: 425 PGYLLKYGSRGEKVKEVQNYLSVISKSYNIPNIKADGIFGQMTKDAVIAFQRLFGLAPDG 484

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T            +   V    IK   +Q +   +     P   L     G+   
Sbjct: 485 IIGINTWN----------KIYYVYKDLIKGTAQQDLNEEFDGKY-PGYLLSYGSKGEKVR 533

Query: 216 RST 218
              
Sbjct: 534 EMQ 536



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V+  +     L  +  +      +  FD   E++VK  Q + GL  +
Sbjct: 703 PGFDLELGDQDGYVKVFQMYVNVLAKNNYISSQIEENGVFDKRTENSVKELQEKFGLKVT 762

Query: 155 GMVDSSTLE 163
           G+VD  T +
Sbjct: 763 GVVDKITWD 771



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F     +AV  FQ   GL   G
Sbjct: 519 PGYLLSYGSKGEKVREMQTYLSVVSKSYNIPSINADGIFGDMTRNAVLSFQRLFGLAQDG 578

Query: 156 MVDSSTLEAM 165
           +V  +T   +
Sbjct: 579 VVGLNTWNKI 588


>gi|154246694|ref|YP_001417652.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160779|gb|ABS67995.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 170

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G S   V+ L+ +L +             F    E A+K +Q +HGL   G+    T
Sbjct: 4   LKRGLSGEPVKILQAKLGV--------AADGKFGPGTEEALKAYQTQHGLAADGIAGPDT 55

Query: 162 LEAMNVPVDLRIRQ 175
             A+ +P  + + Q
Sbjct: 56  FAALGLPELILLTQ 69



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 23/103 (22%)

Query: 78  TEKAIAFYQ---DILSRG----------GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           TE+A+  YQ    + + G          G PEL    L  G+   +V++L+  L I+   
Sbjct: 32  TEEALKAYQTQHGLAADGIAGPDTFAALGLPEL--ILLTQGSKGETVKKLQTALGIT--- 86

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                   A+      AV+ FQ ++GL+  GM    TL  ++V
Sbjct: 87  -----ADGAYGPGTAKAVEAFQAKNGLEADGMAGPVTLSKIDV 124


>gi|260174282|ref|ZP_05760694.1| SpoIID/LytB domain-containing protein [Bacteroides sp. D2]
 gi|315922552|ref|ZP_07918792.1| predicted protein [Bacteroides sp. D2]
 gi|313696427|gb|EFS33262.1| predicted protein [Bacteroides sp. D2]
          Length = 285

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 12/141 (8%)

Query: 105 GNSSVSVQRLRERL-----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           G S   V  L  +L     II  D++ +    V +   +E+A+K FQ  H     G+V  
Sbjct: 128 GVSGKDVAELANKLVKIRYIIKSDIEKNYSGDVKYSIRLENAIKKFQKDHNQVVDGIVGK 187

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T+EA+N  ++   R+     ++   L ++ +  +    ++       ++ G +      
Sbjct: 188 KTIEAINKQIEQINRETVNTDVQKYNLGDRILKKQMQGYDVTQLKNILIDKGYLS----- 242

Query: 220 IVGRVDRQTPILHSRINRIMF 240
             G++ + T +      + + 
Sbjct: 243 --GKLLKGTSLFDEETEKAVI 261



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L        V +L+  LI  G L       +  FD   E AV  FQ   G+D  G+V++ 
Sbjct: 219 LKKQMQGYDVTQLKNILIDKGYLSGKLLKGTSLFDEETEKAVIKFQKSIGIDADGIVETQ 278

Query: 161 TL 162
           T+
Sbjct: 279 TV 280


>gi|159046137|ref|YP_001541809.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|159046472|ref|YP_001542142.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157913896|gb|ABV95328.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157914231|gb|ABV95661.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 193

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 66/217 (30%), Gaps = 54/217 (24%)

Query: 147 MRHGLDPSGMVD---SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            R  L  +G +     +T  A  V +  R     VN  R   +     G  +V+ +    
Sbjct: 5   TRRELICAGAMGCFLPTTAWAHKVKLPERFEPQLVNTRRGDWV----KGDVHVVPD--DF 58

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            L  +    + +R  V VGR     P     + R    P+W    ++I+++     +   
Sbjct: 59  FLYFMLEDGMAIRYGVGVGRKGLYEP-GEFTVARKAKWPWWRPTNAMIRREPRKYAK--- 114

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN--T 321
                                           +      G  N + +  +  Y      T
Sbjct: 115 --------------------------------YKDGLKGGPNNPLGARALYLYDAEGRDT 142

Query: 322 Y--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
           Y  +H T  P    +     ++GC R+ N  + DL  
Sbjct: 143 YLRIHGTNAPETIGS---AVSNGCARLTNEHVKDLYE 176


>gi|86138807|ref|ZP_01057379.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
 gi|85824454|gb|EAQ44657.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. MED193]
          Length = 199

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 55/188 (29%), Gaps = 45/188 (23%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLE-QKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVI 220
               +     +++   +  +         +G+  +L ++ + ++     +G+        
Sbjct: 36  SEEPISNQPSVQRNISSFRQQNWQDHFDDLGMGCLLADVTSRAVHYWGGDGETYRLYPSS 95

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V   +  T   ++++ R   NP W    S+ ++D                          
Sbjct: 96  VPMSEELTKRGYTKVVRKAENPSWTPTPSMRERD-------------------------- 129

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P+   R   G  N + +  +         +H T +        R  +
Sbjct: 130 -------------PSLPTRLPGGPGNPLGTRAMYLSWP-AYLVHGTHDTRKIG---RQSS 172

Query: 341 SGCVRVRN 348
           SGC+ + N
Sbjct: 173 SGCIGLYN 180


>gi|328545089|ref|YP_004305198.1| ErfK/YbiS/YcfS/YnhG family [polymorphum gilvum SL003B-26A1]
 gi|326414831|gb|ADZ71894.1| ErfK/YbiS/YcfS/YnhG family [Polymorphum gilvum SL003B-26A1]
          Length = 241

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 44/183 (24%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                 R RQ+    +      +       ++V+  A  L  V+ G    R  + VGR  
Sbjct: 84  ARTQTPRHRQIAPQYLPTIVDYDGPHAPGTIVVDTNARYLYLVQRGGTARRYGIGVGRPG 143

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            +       + R    P W  P  + Q+                                
Sbjct: 144 FE-WAGTHTVTRKAEWPDWRPPSEMRQRQ------------------------------- 171

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                   P+       G  N + +  +         +H + EP    +     +SGC+R
Sbjct: 172 --------PDLPEFMPGGPQNPLGARALYLG-STLYRIHGSNEPWTIGH---AVSSGCIR 219

Query: 346 VRN 348
           +RN
Sbjct: 220 MRN 222


>gi|297204419|ref|ZP_06921816.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
 gi|197716685|gb|EDY60719.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
          Length = 300

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 7/77 (9%)

Query: 95  PELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ-MRHG 150
           P +       L LG+    V  L+ RL   G  D        FD  V+SAV+ +Q  R  
Sbjct: 220 PTVSSGLPPVLSLGDKGPEVVELQLRLRQVGLYDGEADGD--FDQQVQSAVRTYQVTRFV 277

Query: 151 LDPS-GMVDSSTLEAMN 166
           L    G+   +T  ++ 
Sbjct: 278 LQDDSGVYGRATRASLE 294


>gi|170760335|ref|YP_001788499.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169407324|gb|ACA55735.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 231

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSATPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKGKKYY--NGEPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  E + V
Sbjct: 220 SFYEKLGV 227


>gi|302558357|ref|ZP_07310699.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
 gi|302475975|gb|EFL39068.1| zinc D-Ala-D-Ala carboxypeptidase [Streptomyces griseoflavus
           Tu4000]
          Length = 231

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+              ++ A   +AVK FQ  +GL   G+   
Sbjct: 27  RTLSQGSSGSDVTQLQIRVAGWVTSGERLAYDGSYGARTAAAVKKFQAAYGLAADGVAGP 86

Query: 160 STLEAM 165
           +T   +
Sbjct: 87  ATFSKI 92


>gi|254488370|ref|ZP_05101575.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
 gi|214045239|gb|EEB85877.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
          Length = 187

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 49/212 (23%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLR 216
            + L A    V   +R    +  + +       +G   ++ +  + +L     +G+    
Sbjct: 22  PAILRAETTDVAA-VRHNTSSFTQQRWEDHFDTLGKAAIVADTTSRALHFWSGDGETYNI 80

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
               V R D  T   ++RI R    P W    S+I+++       D +Y+          
Sbjct: 81  YPTSVPRSDELTKRGYTRIVRKRVGPDWTPTPSMIERNP------DLKYM---------- 124

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
                                    PG  N + +  +         +H T +        
Sbjct: 125 ------------------------PPGPDNPLGTHAMYLDWP-AYLIHGTHDTRKIG--- 156

Query: 337 RFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
           R  + GC+ + N   +   L +  P  ++  I
Sbjct: 157 RQSSDGCIGLYN--HMIEALFQIAPVGTQVRI 186


>gi|167945516|ref|ZP_02532590.1| general secretion pathway protein A [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 99

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W       L   G+    V  LR RL +S G    + G+S  FD  +   ++ +Q+R GL
Sbjct: 5   WRPHAGEALIGPGSDGPLVTWLRRRLALSNGIKLSADGVSQQFDEELGVQLREYQLRTGL 64

Query: 152 DPSGMVDSST 161
            P G+    T
Sbjct: 65  KPDGVAGQKT 74


>gi|85713538|ref|ZP_01044528.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85699442|gb|EAQ37309.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 221

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 8/66 (12%)

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN-- 348
                R   G  N + +  +     +++  + +H T +P          +SGC+R+ N  
Sbjct: 130 GGLPSRVAGGPDNPLGARALYLYQGNKDTLFRIHGTNQPEYIGTS---ISSGCIRMTNED 186

Query: 349 IIDLDV 354
            IDL  
Sbjct: 187 AIDLYD 192


>gi|298292414|ref|YP_003694353.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296928925|gb|ADH89734.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 174

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 8/65 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V+ L+E+L +             F    E A+K +Q +HGL   G+    T
Sbjct: 4   LKKGLAGAPVKILQEKLGV--------PADGRFGPKTEEALKAYQKQHGLSADGIAGPDT 55

Query: 162 LEAMN 166
             A+ 
Sbjct: 56  FAALG 60



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G S  +V++L+  L I        G    F      AVK +Q  +GL+  G    +T
Sbjct: 67  LKVGTSGETVKKLQSALGI--------GADGKFGPGTAKAVKEYQAANGLEADGYAGPAT 118

Query: 162 LEAMN 166
           L  + 
Sbjct: 119 LAKLA 123


>gi|315150422|gb|EFT94438.1| peptidase [Enterococcus faecalis TX0012]
          Length = 477

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV  FQ ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDFQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|296120396|ref|YP_003628174.1| ErfK/YbiS/YcfS/YnhG family protein [Planctomyces limnophilus DSM
           3776]
 gi|296012736|gb|ADG65975.1| ErfK/YbiS/YcfS/YnhG family protein [Planctomyces limnophilus DSM
           3776]
          Length = 396

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN- 348
               P     +     N +    ++  +      H T EP          + GC+R++N 
Sbjct: 323 QYTDPEGRVIEGKDPRNPLGPRWLDLGNSYGI--HGTIEPESIGK---AASRGCIRLQND 377

Query: 349 -IIDLDVWLLKDTP 361
             I++  +L+K + 
Sbjct: 378 DAIEVYDFLVKGSE 391


>gi|91975749|ref|YP_568408.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91682205|gb|ABE38507.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 224

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 63/196 (32%), Gaps = 57/196 (29%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V+     L  V++G   +R  + VG          +++  +   P W    S I +  
Sbjct: 72  IVVDSDNHYLYYVQDGGKAIRYGITVGEEA-MAWSGIAKVGAMAEWPAWHPTPSEISRLG 130

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
           +                                             PG  N M S  I  
Sbjct: 131 VPRF----------------------------------------VAPGPDNPMGSRAIYL 150

Query: 316 YS--RNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV--------WLLKDTPT 362
           YS  ++  + +H T +P          +SGC+R+ N  +IDL           +L+    
Sbjct: 151 YSGGKDTLFRIHGTNQPEYIGAS---ISSGCIRMTNEDVIDLYNRVKMGAIVVVLEPKHG 207

Query: 363 WSRYHIEEVVKTRKTT 378
            S Y+ +  ++   +T
Sbjct: 208 DSPYNSKMALQGGGST 223


>gi|228996068|ref|ZP_04155720.1| hypothetical protein bmyco0003_6620 [Bacillus mycoides Rock3-17]
 gi|229003684|ref|ZP_04161496.1| hypothetical protein bmyco0002_6550 [Bacillus mycoides Rock1-4]
 gi|228757521|gb|EEM06754.1| hypothetical protein bmyco0002_6550 [Bacillus mycoides Rock1-4]
 gi|228763635|gb|EEM12530.1| hypothetical protein bmyco0003_6620 [Bacillus mycoides Rock3-17]
          Length = 253

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNI--HMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N         GK             N  +   +  +  PG    N + +  + 
Sbjct: 35  LSFFENGNYVRTFPVTTGKRQTPTPEGTFCIINKYKNKEYHRKNIPGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             +     +H T          R E++GC+R+ +
Sbjct: 95  L-NEKEYAIHGTNREGTIG---RRESNGCIRMHD 124


>gi|218673428|ref|ZP_03523097.1| hypothetical protein RetlG_18533 [Rhizobium etli GR56]
          Length = 165

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 34/131 (25%), Gaps = 4/131 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             +   ++ RL+  L  +G       +       V  AV  F+  + L   G  D   + 
Sbjct: 38  PADPEPAIVRLQVLLDRAG--SSPGVIDGLSGENVNKAVAGFEAMNKLPVDGRPDPEVVS 95

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVG 222
            +     + +R   V+      L+E           + +       E         + + 
Sbjct: 96  RLEDNAAI-VRSYVVSPEDATGLVETIPEDYGEKAKMQSLGYTSVAEKLSERFHMGLDLL 154

Query: 223 RVDRQTPILHS 233
                      
Sbjct: 155 NALNPASQFSP 165


>gi|325293693|ref|YP_004279557.1| hypothetical protein AGROH133_08049 [Agrobacterium sp. H13-3]
 gi|325061546|gb|ADY65237.1| hypothetical protein AGROH133_08049 [Agrobacterium sp. H13-3]
          Length = 205

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 43/183 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++ + +++  L R +   +       V+V+ PA  L  V      +R  V VGR     
Sbjct: 42  PEMHLDKVKPELRRQEVAYDTAHPAGTVIVDTPARRLYYVLGDGRAMRYGVGVGRQG-LA 100

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I R    P W    +++++D      ++ +Y     +                 
Sbjct: 101 LKGDAYIGRKSEWPSWTPTANMMRRDP-----RNLKYA--GGME---------------- 137

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +      +     +H T +P    + +   +SGC+R
Sbjct: 138 -------------GGPNNPLGARALYLYRGGNDTMFRLHGTNQPQSIGHAM---SSGCIR 181

Query: 346 VRN 348
           + N
Sbjct: 182 MLN 184


>gi|190890872|ref|YP_001977414.1| hypothetical protein RHECIAT_CH0001255 [Rhizobium etli CIAT 652]
 gi|190696151|gb|ACE90236.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 244

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 44/199 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   Q+     R + L         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEQIDPRYYRQRVLDPTGQPPGTIVVDTPSRFLYLVQADGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY-LKDNNIHMIDEKGKEVFVEEVD 287
                 I      P W  P      +M+A   +  +Y + +  +                
Sbjct: 138 WQGSGVIQWRQKWPRWKPP-----NEMVARQPELVKYSIDNGGME--------------- 177

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCV 344
                         PG  N + +  +  F +  +  Y +H  P+           +SGCV
Sbjct: 178 --------------PGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCV 220

Query: 345 RV--RNIIDLDVWLLKDTP 361
           R+  ++IIDL   +    P
Sbjct: 221 RLMNQDIIDLYDRVPTKAP 239


>gi|75908501|ref|YP_322797.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75702226|gb|ABA21902.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 198

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GNS V+V+ L+  L+  G       +   F A  E+AVK FQ++  L   G+V  +
Sbjct: 135 TLRFGNSGVAVRALQRLLVAKGYAVR---VDGNFGALTETAVKAFQIQRNLSVDGVVGFN 191

Query: 161 TLEAMNV 167
           T  ++  
Sbjct: 192 TWYSLTR 198


>gi|297617690|ref|YP_003702849.1| peptidoglycan-binding protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145527|gb|ADI02284.1| Peptidoglycan-binding domain 1 protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 246

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 35/105 (33%), Gaps = 19/105 (18%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL--------II 120
           I+  +T     +    Y      G       R L  G+    V  L+ RL        + 
Sbjct: 76  IVGPQTYWCLGQPTGKYAQGRVFG------SRTLRRGSRHTDVWILQNRLNAKAKKYAVA 129

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            G           F    E+AVKLFQ   G+   G+V   T + +
Sbjct: 130 LG-----GPADGNFGPKTETAVKLFQGDSGISVDGVVGPVTFDQL 169



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G + + V  L+++L+              F    E+AV  FQ   G+   G+  
Sbjct: 177 GRNLQKGRNGIDVFALQKKLVALSY--NPGPCDGKFGPKTEAAVIKFQKDAGIAADGIAG 234

Query: 159 SSTLEAMNV 167
             T  ++ +
Sbjct: 235 PQTYYSLGI 243



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 21/73 (28%), Gaps = 2/73 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                  V+ L+  L    D            F    ESAV  FQ    +   G+V   T
Sbjct: 22  PYTRGTDVKVLQSLLNYFKDPLGIQLLTEDGIFGPKTESAVIKFQQYVQISVDGIVGPQT 81

Query: 162 LEAMNVPVDLRIR 174
              +  P     +
Sbjct: 82  YWCLGQPTGKYAQ 94


>gi|254785273|ref|YP_003072701.1| peptidoglycan binding domain containing protein [Teredinibacter
           turnerae T7901]
 gi|237686178|gb|ACR13442.1| Peptidoglycan binding domain containing protein [Teredinibacter
           turnerae T7901]
          Length = 554

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G  + ++  L ++  +  D  PS      F+A +   VK+FQ  HGL+  G++ 
Sbjct: 475 SEPLVMGQKNPAIGWLAKQFALL-DERPSPLTDDRFNANLRERVKIFQRTHGLEDDGIIG 533

Query: 159 SSTL 162
           + TL
Sbjct: 534 ARTL 537


>gi|223984153|ref|ZP_03634304.1| hypothetical protein HOLDEFILI_01597 [Holdemania filiformis DSM
           12042]
 gi|223963885|gb|EEF68246.1| hypothetical protein HOLDEFILI_01597 [Holdemania filiformis DSM
           12042]
          Length = 171

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G++ + VQ+++  L               F A  E+ V  FQ  H L P G +   
Sbjct: 102 PLEYGDTGLEVQKMQNYLNKLTLPSTPITADGVFGAKTEAKVIAFQNAHSLTPDGKIGEK 161

Query: 161 TLEAMNV 167
           T + +  
Sbjct: 162 TWDKIIA 168



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 6/112 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
              +  G + ++V++++  L +      DL        +F +  E+AV +FQ   GL   
Sbjct: 9   AYVIRRGYTGLAVKKMQHYLNVLRTSYPDLPV-LKEDGSFGSATENAVMIFQKHTGLTAD 67

Query: 155 GMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           G++ + T + +              +     +    + G   + V      L
Sbjct: 68  GIIGTLTWDKIIAKYKAAPGPGPDPDPDPGTEQPPLEYGDTGLEVQKMQNYL 119


>gi|308069349|ref|YP_003870954.1| peptidoglycan-binding domain-containing protein [Paenibacillus
           polymyxa E681]
 gi|305858628|gb|ADM70416.1| Putative peptidoglycan-binding domain-containing protein
           [Paenibacillus polymyxa E681]
          Length = 163

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 40/122 (32%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+S   V+ L+  L   G       +  +F + V++ ++ FQ   GL   G+  S 
Sbjct: 42  TLRQGDSGGYVRALQANLWAYGQQGDVGKIDGSFGSGVKTGLQNFQRNKGLSADGIAGSG 101

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T   M   V + +      L             R         ++    N KV    TV 
Sbjct: 102 TWNRMTYNVSIEVPGRSFTLSSSDSSTYYVFYGRNDNNRSMRYAVLYKSNNKVITEGTVF 161

Query: 221 VG 222
             
Sbjct: 162 YN 163


>gi|289642238|ref|ZP_06474388.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia symbiont of Datisca
           glomerata]
 gi|289507972|gb|EFD28921.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia symbiont of Datisca
           glomerata]
          Length = 317

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 32/115 (27%), Gaps = 22/115 (19%)

Query: 268 DNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFR-----QDPGKINAMASTKIEFYSRNN- 320
           ++ + + D++   V     V       P   F      Q      A           +  
Sbjct: 203 EHRLRVYDKQQVVVDEPTAVGTGDTPTPGGKFYLTELLQPRNPAGAYGPYAFGLSGFSTT 262

Query: 321 ----------TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                       +H T +P L        + GC+RV N  I  L   L   TP  
Sbjct: 263 LDSFEGRAPVIGIHGTNQPNLLGQD---VSHGCIRVSNETITRLARLLPLGTPVE 314


>gi|221195274|ref|ZP_03568330.1| cell wall hydrolase/autolysin [Atopobium rimae ATCC 49626]
 gi|221185177|gb|EEE17568.1| cell wall hydrolase/autolysin [Atopobium rimae ATCC 49626]
          Length = 309

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 14/149 (9%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
            PI        + +    +V  R D  +   +   ++  P  +K              + 
Sbjct: 2   DPITPGSTGAAVEDIQERLV--RLDYVIDDSEREKNTYGPSTAKAVARFRLDHDLSLGED 59

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +    W  L      LG+              V++L+ERL I G           +  + 
Sbjct: 60  VDTATWMLLVDESYQLGDRTLYLRLPNFHGNDVRQLQERLNILGF--SCGKPDGQYGVHT 117

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+AVKLFQ   G    GM    TL+A+  
Sbjct: 118 EAAVKLFQESVGELADGMAFQDTLDAIER 146


>gi|254474928|ref|ZP_05088314.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Ruegeria sp.
           R11]
 gi|214029171|gb|EEB70006.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Ruegeria sp.
           R11]
          Length = 183

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 63/188 (33%), Gaps = 43/188 (22%)

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
               ++   + + G   VL    +  L  V   +   R  V VG+   +     + I   
Sbjct: 30  TPQDVRIKKQFEPGQILVLPR--SYYLYFVTERRRARRYGVGVGKAGLE-FTGTATIEAK 86

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
              P W     +I        ++DP+         +D                      +
Sbjct: 87  REWPSWRPTPEMI--------QRDPRAYAR----FVDND--------------------Y 114

Query: 299 RQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
            Q  GK N + +  +  F +  +TY  +H T +P    +     ++GC+R+ N  I+DL 
Sbjct: 115 IQPGGKSNPLGARALYLFQNGVDTYFRIHGTNKPETIGSS---VSNGCIRMTNEHIVDLY 171

Query: 354 VWLLKDTP 361
             +   T 
Sbjct: 172 DRVPIGTV 179


>gi|163791094|ref|ZP_02185514.1| carboxyl-terminal protease [Carnobacterium sp. AT7]
 gi|159873650|gb|EDP67734.1| carboxyl-terminal protease [Carnobacterium sp. AT7]
          Length = 496

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   LG+ S  V+ L + L   G       +   FD   + AV  FQ+   L   G V 
Sbjct: 403 SKTYQLGDVSEEVKNLEKVLDALGY--SVDTIDGYFDEATQKAVSQFQIDKKLPVDGKVT 460

Query: 159 SSTLEAMNVPVDLRIR 174
             T   +   +   I 
Sbjct: 461 GETATQLVESLRKLID 476


>gi|84497560|ref|ZP_00996382.1| endopeptidase [Janibacter sp. HTCC2649]
 gi|84382448|gb|EAP98330.1| endopeptidase [Janibacter sp. HTCC2649]
          Length = 193

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 21/176 (11%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V  L++RL   G           + +    AV   Q   GL   G V S+T +A
Sbjct: 2   GDRGPKVLALQQRLSNLGYWLGEP--DGHYGSLTRQAVWALQKSAGLSRDGNVGSATQKA 59

Query: 165 MNVPVDLRIRQ----LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           +   V    +     + +NL R   ++ +   + Y+L             G     +   
Sbjct: 60  LANGVRPSTQLSGDGIDINLSRQILMIVRGGEVTYILNTST--------GGGYKYETKKG 111

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM------MALLRQDPQYLKDNN 270
                R TP    ++   +         ++ +         +      P Y   + 
Sbjct: 112 NTATAR-TPKGTFKVYYTVDGSDEGFLGTMWRPRYFHGGYAVHGSPSIPAYPASHG 166


>gi|312135699|ref|YP_004003037.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor owensensis
           OL]
 gi|311775750|gb|ADQ05237.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor owensensis
           OL]
          Length = 223

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  +++RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQKRLKELGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 32/124 (25%), Gaps = 16/124 (12%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+    I         GK      V        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKEGILYKSYPISPGKPSTPTPVGTFKIISKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
              R     +H T             + GCVR+  +++ +L  ++   T       I   
Sbjct: 92  LNVRYGKYGIHGTIYESYIGA---HVSKGCVRMLNKDVKELFSYIPIGTTVVISEGIYGE 148

Query: 372 VKTR 375
            +  
Sbjct: 149 FRNG 152


>gi|170756349|ref|YP_001780527.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
 gi|169121561|gb|ACA45397.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
          Length = 125

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKS---VSNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            ++++N    +L   ++  V     V VG+    TP    +I     NP  
Sbjct: 16  YHIIINTQTHTLTLFKDNNVYKTYKVAVGKPSTPTPKGTFKIINRAINPGG 66


>gi|32141264|ref|NP_733665.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces coelicolor
           A3(2)]
 gi|24430040|emb|CAD55354.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           coelicolor A3(2)]
          Length = 244

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 40  RTLSQGASGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 99

Query: 160 STLEAM 165
           +T   +
Sbjct: 100 ATFSKI 105


>gi|17231042|ref|NP_487590.1| hypothetical protein all3550 [Nostoc sp. PCC 7120]
 gi|17132683|dbj|BAB75249.1| all3550 [Nostoc sp. PCC 7120]
          Length = 208

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 29/93 (31%), Gaps = 3/93 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           ++        +    L  G+    VQ L+ +L   G           +    + AV  FQ
Sbjct: 37  EVAQVSSTSTIGQVVLKPGSQGPDVQTLQTQLKQLGYYSGIA--DGKYGDSTKKAVAKFQ 94

Query: 147 MRH-GLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
                    G+ D +T   +   +     +L V
Sbjct: 95  QAKVFSRVDGVADLATKRILQTALIDNQNKLAV 127


>gi|149202226|ref|ZP_01879199.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. TM1035]
 gi|149144324|gb|EDM32355.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. TM1035]
          Length = 184

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 10/93 (10%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPI 330
                + +  +   +   +  ++   Q  G  N + S  +  F +  +TY  +H T +P 
Sbjct: 93  WRPTDEMIERDPRTYGRFKGNDY--VQPGGAGNPLGSRALYLFQNGRDTYYRIHGTTQPS 150

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                    ++GC+R+   ++ DL   +   T 
Sbjct: 151 SIGQS---VSNGCIRMINEHVQDLYDRVPIGTV 180


>gi|126737923|ref|ZP_01753653.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
 gi|126721316|gb|EBA18020.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. SK209-2-6]
          Length = 154

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 54/186 (29%), Gaps = 47/186 (25%)

Query: 179 NLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLR-STVIVGRVDRQTPILHSRIN 236
           +  +         +G+  +L ++ + ++          R     V   +  T   ++++ 
Sbjct: 7   SFQQQSWQDHFDELGVGCLLADVASRAVHYWGGDGETFRLYPSSVPMSEELTKRGYTKVV 66

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           R   NP W    S+ ++D                                       P+ 
Sbjct: 67  RKAKNPTWTPTPSMRERD---------------------------------------PSL 87

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
             R   G  N + S  +         +H T +        R  +SGC+ + N  + +L  
Sbjct: 88  PVRMAGGVGNPLGSRGMYLSWP-AYLVHGTHDTRKIG---RQSSSGCIGLYNQHVEELYE 143

Query: 355 WLLKDT 360
            +   T
Sbjct: 144 LVKVGT 149


>gi|87123874|ref|ZP_01079724.1| hypothetical protein RS9917_09701 [Synechococcus sp. RS9917]
 gi|86168443|gb|EAQ69700.1| hypothetical protein RS9917_09701 [Synechococcus sp. RS9917]
          Length = 158

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 57/201 (28%), Gaps = 54/201 (26%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           + +PV  R R   V   ++  L        ++ +      +  + +G+      V +G  
Sbjct: 3   LVMPVQGRARPASV-PDQLAVLPAAPSTQIHLDLR--QRRISVLRDGQRFGPWPVAIGDP 59

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
              TP    ++  +                     R++PQY           K  +V   
Sbjct: 60  KTPTPAGVFQVENM---------------------RKNPQY--------QSTKSGKVHPV 90

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTYMHDTPEPILFNNVVRFETSG 342
                             G    +    I F     N   +H TP P          ++G
Sbjct: 91  T-----------------GPKAPLGHRWIGFLQQGPNQFGIHGTPWPHWVKIRA-AVSNG 132

Query: 343 CVRVRNI--IDLDVWLLKDTP 361
           CVR+ N     L   +   TP
Sbjct: 133 CVRMLNAHVQQLFELVDVGTP 153


>gi|209883787|ref|YP_002287644.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209871983|gb|ACI91779.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 203

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 51/204 (25%), Gaps = 48/204 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                 +L     R             ++V+     L  V+     LR  + VGR   Q 
Sbjct: 44  PSAEEEELAPQFKRTMVFYRTTEAPGTIIVSTSERFLYVVQGNGRALRYGIGVGREGFQ- 102

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                +I R    P W  P  +I +                                   
Sbjct: 103 WKGLLKITRKQEWPDWTPPPEMIARQ---------------------------------- 128

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
                P        G  N M +  +        Y +H T +P          +SGC R+ 
Sbjct: 129 -----PYLPRFMAGGPGNPMGARALYL--GTTVYRIHGTNQPQTIGT---AVSSGCFRLV 178

Query: 348 NII--DLDVWLLKDTPTWSRYHIE 369
           N    DL   +   T    R   E
Sbjct: 179 NADVIDLYERIPVGTKVIVRQKPE 202


>gi|299134200|ref|ZP_07027393.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298590947|gb|EFI51149.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 249

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 46/152 (30%), Gaps = 44/152 (28%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +++ P   L  V++    LR  V VG+           I+     P W  P  ++++   
Sbjct: 123 VIDTPNKFLYLVQDNGRALRYGVGVGKPGFM-WSGVKTISAKREWPDWTPPAEMLKRR-- 179

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                P+     + G  N + +  +   
Sbjct: 180 -------------------------------------PDLPRHMEGGPENPLGARAMYLG 202

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           S     +H + EP          +SGC+R+RN
Sbjct: 203 SS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 230


>gi|289768974|ref|ZP_06528352.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
 gi|289699173|gb|EFD66602.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
          Length = 229

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 25  RTLSQGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 84

Query: 160 STLEAM 165
           +T   +
Sbjct: 85  ATFSKI 90


>gi|256785081|ref|ZP_05523512.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces lividans TK24]
          Length = 222

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+   
Sbjct: 18  RTLSQGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLGADGVAGP 77

Query: 160 STLEAM 165
           +T   +
Sbjct: 78  ATFSKI 83


>gi|170759637|ref|YP_001786273.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
 gi|169406626|gb|ACA55037.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 125

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKS---VSNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            ++++N    +L   ++  V     V VG+    TP  + +I     NP  
Sbjct: 16  YHIIINTQTHTLTLFKDNNVYKTYKVAVGKPSTPTPKGNFKIINRAINPGG 66


>gi|303241311|ref|ZP_07327816.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
 gi|302591150|gb|EFL60893.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
          Length = 2818

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 99   IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V  L++ L+  G L   KG+    +    + AV+ +Q+R  +   G  
Sbjct: 2475 GTVLKVGSKGEDVVILQKELVELGCLTMPKGVEYGYYGNLTQEAVRQYQIRARITVDGKA 2534

Query: 158  DSSTLEAMN 166
               T +A+ 
Sbjct: 2535 GDQTWKALG 2543


>gi|72537711|ref|YP_293741.1| gp28-like protein [Burkholderia phage phi52237]
 gi|254188181|ref|ZP_04894693.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|72398401|gb|AAZ72636.1| gp28-like protein [Burkholderia phage phi52237]
 gi|157935861|gb|EDO91531.1| putative peptidoglycan binding domain [Burkholderia pseudomallei
           Pasteur 52237]
          Length = 270

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L   +    V  L++RL+ +G       +S  +D   E AV+  Q   GL   G+     
Sbjct: 4   LRFNDHGAEVGLLQQRLVRAGY---PVDVSHLYDEQTERAVQTLQAAAGLVVDGIAGPKM 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
              +             +L R
Sbjct: 61  YRVLASGQRDPKHLTDADLAR 81


>gi|322807493|emb|CBZ05068.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYY--NGDPDGIYGENMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|170755984|ref|YP_001782818.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
 gi|169121196|gb|ACA45032.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum B1 str.
           Okra]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYY--NDEPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|168183495|ref|ZP_02618159.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|237796634|ref|YP_002864186.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
 gi|182673343|gb|EDT85304.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|229263482|gb|ACQ54515.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKGKKYY--NGEPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|168179172|ref|ZP_02613836.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|226950607|ref|YP_002805698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|182669937|gb|EDT81913.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|226843014|gb|ACO85680.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTNAPNSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 SS---SHGCIRMKN 131



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L        +      +   ++S V  FQ  + +  S  ++S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYY--NGDPDGIYGESMKSVVHKFQEDNNIPLSNTINS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|88703621|ref|ZP_01101337.1| general secretion pathway protein A [Congregibacter litoralis KT71]
 gi|88702335|gb|EAQ99438.1| general secretion pathway protein A [Congregibacter litoralis KT71]
          Length = 560

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+    V R+   L    D        + FD  +E+ VKLFQ + GL   G++ 
Sbjct: 470 GRTLQRGDRGDDVARVAA-LFARLDGQIQPLTEMLFDPRLEARVKLFQQQQGLRADGVLG 528

Query: 159 SSTLEAMNVPVDLRI 173
            +TL A+++ V   +
Sbjct: 529 ENTLRALSLAVGDDL 543


>gi|332974779|gb|EGK11695.1| ErfK/YbiS/YcfS/YnhG family protein [Desmospora sp. 8437]
          Length = 317

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 42/174 (24%), Gaps = 61/174 (35%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             ++ VN     L   + G+     +V  GR    TP    ++      P          
Sbjct: 52  RPWIEVNKATNRLTLHQAGRAIKSYSVATGRSQSLTPEGTFKVVVKFIKP---------- 101

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                                              W                 N +    
Sbjct: 102 ----------------------------------GWKGIAGGL--------PENPLGERW 119

Query: 313 IEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           I             +H T +P          +SGCVR+RN  +IDL   + + T
Sbjct: 120 IGIQVNGDRGRTYGIHGTNQPDSIGT---HASSGCVRMRNRDVIDLYNRVPEGT 170


>gi|254520785|ref|ZP_05132841.1| peptidoglycan-binding domain 1 protein [Clostridium sp. 7_2_43FAA]
 gi|226914534|gb|EEH99735.1| peptidoglycan-binding domain 1 protein [Clostridium sp. 7_2_43FAA]
          Length = 605

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 4/73 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD----LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P   L +G+ + +V+ ++E+L         +         F    E +VK+FQ    L P
Sbjct: 324 PGYSLRIGDVNENVKVIQEQLNRVSKNFPAIPRIYPEDGRFGKETEDSVKVFQRVFNLTP 383

Query: 154 SGMVDSSTLEAMN 166
            G+V  +T   ++
Sbjct: 384 DGVVGRATWYKIS 396



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 14/81 (17%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLD--------PSKGLSVAFDAYVESAVKL 144
           G  + P   L  G     V+ L+      G L         P+  +   F    + A+  
Sbjct: 429 GDGKYPGYLLKYGARGEKVRELQ------GYLSEISKSYNIPNVSVDGIFGNVTKDAIIK 482

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ   GL   G+V  +T   +
Sbjct: 483 FQRLFGLSTDGIVGLATWNKV 503



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 6/72 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLI----ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P   L  G+    V+ ++  L       G   P+      F      AV  FQ    L  
Sbjct: 527 PGYLLKYGSRGEKVKEVQYYLASISNQIG--IPTIAADGIFGNATREAVVAFQKLFALSL 584

Query: 154 SGMVDSSTLEAM 165
            G++   T   +
Sbjct: 585 DGIIGQYTWNKI 596


>gi|299134009|ref|ZP_07027202.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298590756|gb|EFI50958.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 203

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 53/202 (26%), Gaps = 48/202 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                 +L     R             ++V+     L  V+     LR  + VGR   Q 
Sbjct: 44  PSEAEEELPPEFKRTTVFYRTTEPPGTIIVSTSERFLYVVQGNGRALRYGIGVGREGFQ- 102

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                +I+R    P W  P  +IQ+                                   
Sbjct: 103 WQGLLKISRKQEWPDWTPPPEMIQRQ---------------------------------- 128

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
                P        G  N M +  +   S    Y +H T +P          +SGC R+ 
Sbjct: 129 -----PYLPRFMAGGPGNPMGARALYLGS--TVYRIHGTNQPQTIGT---AVSSGCFRLV 178

Query: 348 NII--DLDVWLLKDTPTWSRYH 367
           N    DL   +   T    R  
Sbjct: 179 NADIIDLYDRIPVGTKVVVRQK 200


>gi|299133154|ref|ZP_07026349.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298593291|gb|EFI53491.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 174

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 47/169 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V      L  + + +  +R  V VG+  ++     +RI+    NP W  P  + +   
Sbjct: 44  IVVKTSERRLYLILDEQHAIRYPVGVGKRGKE-WAGETRISGKYRNPAWSPPDDVKR--- 99

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIE 314
                                               + PN     + G   N M    + 
Sbjct: 100 ------------------------------------DHPNIPDVIEGGSPRNPMGVAAMT 123

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
                   +H T  P        + + GCVR+ N    DL   +   TP
Sbjct: 124 LAGGQ-YAIHGTNVPKSVG---GYVSYGCVRMYNPDITDLFERVSVGTP 168


>gi|89099360|ref|ZP_01172237.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911]
 gi|89085969|gb|EAR65093.1| hypothetical protein B14911_22317 [Bacillus sp. NRRL B-14911]
          Length = 170

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 5/65 (7%)

Query: 289 NSPEPPNFIFR-QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
               P +++   ++P          +    +    +H T  P          + GCVR+ 
Sbjct: 94  TQTPPGDYVIVNREPNPGGPFGIMWLSLS-KAGYGIHGTNNPASIGK---AVSKGCVRMN 149

Query: 348 NIIDL 352
           N   L
Sbjct: 150 NQDVL 154


>gi|90426193|ref|YP_534563.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90108207|gb|ABD90244.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 265

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++ P   L  V+     LR  + VGR    T     +I+     P W  P  ++ +  
Sbjct: 138 IVIDTPNKFLFLVQGDGTALRYGIGVGRPG-FTWSGVKQISAKKEWPAWTPPPEMLARR- 195

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 196 --------------------------------------PDLPRHMEGGPQNPLGARAMYL 217

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H + EP          +SGC+R+RN
Sbjct: 218 G-STLYRIHGSNEPWTIGTN---VSSGCIRMRN 246


>gi|311030560|ref|ZP_07708650.1| hypothetical protein Bm3-1_08466 [Bacillus sp. m3-13]
          Length = 352

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           +  G +   V  L+ RL  +G       +   +      AVK FQ   GLD   G+V   
Sbjct: 34  IQKGATGNDVVELQARLQYNGYYH--ARIDGVYGWSTYWAVKNFQQEFGLDHVDGLVGPK 91

Query: 161 TLEAMNV 167
           T E +  
Sbjct: 92  TKEMLQK 98


>gi|194015644|ref|ZP_03054260.1| N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194013048|gb|EDW22614.1| N-acetylmuramoyl-L-alanine amidase XlyB (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 267

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 15/125 (12%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH---LGN 106
           D+F   +A    G  S    +  E+++         +  +++     LP   L       
Sbjct: 147 DQFKAGIATARTGSKSTRKPVRTESLSH--------KAPVTKQKSSNLPSGILKITKPLT 198

Query: 107 SSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               V  +++ L            + G+   + +   +AVK FQ+ +GL   G+    T 
Sbjct: 199 KGPQVIAVQKALSSLYFYPDKGAKNNGIDGYYGSKTANAVKRFQLMNGLAADGIYGPKTK 258

Query: 163 EAMNV 167
             +  
Sbjct: 259 NKIER 263


>gi|307317204|ref|ZP_07596645.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306897292|gb|EFN28037.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 193

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 44/191 (23%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                  ++     R +           ++VN     L  V+ G   +R  + VG   R 
Sbjct: 31  SPQSARTRIDPRYRRQEVAYYGGEAPGTIVVNTGERYLYYVQGGGSAIRYGIGVGEEGR- 89

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T    ++I R    P W    ++I++     L Q                          
Sbjct: 90  TLKGRAKIGRKAEWPSWTPTANMIRRK--PHLAQ-------------------------- 121

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                   +      G  N + +  +      +     +H T EP          +SGC+
Sbjct: 122 --------YAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQ---AVSSGCI 170

Query: 345 RVRNIIDLDVW 355
           R+ N  D+   
Sbjct: 171 RLTN-DDIVDL 180


>gi|226358218|ref|YP_002787957.1| peptidoglycan-binding domain 1 protein [Deinococcus deserti VCD115]
 gi|226319861|gb|ACO47855.1| putative peptidoglycan-binding domain 1 protein [Deinococcus
           deserti VCD115]
          Length = 241

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+    W +L    +  G+S+ +V+ ++++L  +G    S  +   F +   SAV+ FQ
Sbjct: 4   GIVGGNTWEKLIA-TVQQGDSNTAVRAVQDQL-RNGYGYGSVTIDGVFGSGTNSAVRDFQ 61

Query: 147 MRHGLDPSGMVDSSTLEAM 165
            + GL   G+V  +T  ++
Sbjct: 62  SKRGLGVDGVVGLNTWHSL 80


>gi|241203830|ref|YP_002974926.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857720|gb|ACS55387.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 204

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 43/182 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       V+V+ PA     V  G   +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYETTHAAGTVIVDTPARRAYYVLGGGRAVRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ I R    P W    ++ +++                                   
Sbjct: 101 AGNAYIGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y         +H T +P          +SGCVR+
Sbjct: 126 -ERYRKLAGGMPGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCVRM 181

Query: 347 RN 348
            N
Sbjct: 182 MN 183


>gi|328543217|ref|YP_004303326.1| ErfK/YbiS/YcfS/YnhG superfamily [polymorphum gilvum SL003B-26A1]
 gi|326412963|gb|ADZ70026.1| ErfK/YbiS/YcfS/YnhG superfamily [Polymorphum gilvum SL003B-26A1]
          Length = 173

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 7/95 (7%)

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPE 328
               ID K  +           + P+       G   N M    +     ++  +H T  
Sbjct: 78  GQTYIDGKYVKPAWSPPAVVKRDFPDLPDVIAGGAPNNPMGVAALTLA-GDDYAIHGTNR 136

Query: 329 PILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           P       R  + GC+R+RN  I+DL   +  +TP
Sbjct: 137 PGSIG---RAVSYGCIRMRNGDILDLFNRVGLNTP 168


>gi|295314812|gb|ADF97556.1| PlyM31 [uncultured phage]
          Length = 357

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++     +    L  G++  +V+ L+  L  +G L     +   F    E+AVK FQ  
Sbjct: 205 AAKPAPSTVKRDYLLDGDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRA 261

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+  + +   +N 
Sbjct: 262 NGLAVDGVFGTGSQAKLNA 280


>gi|218782967|ref|YP_002434285.1| peptidoglycan-binding domain 1 protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764351|gb|ACL06817.1| Peptidoglycan-binding domain 1 protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 616

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           LG+    V  +++ LI  G    S      +      A+K FQ   G+   G+   +T+
Sbjct: 546 LGDKGPLVNWIQDVLIHGGY---SLSKDGVYGPRTSKAIKSFQTDFGIRADGVAGPTTI 601


>gi|218509595|ref|ZP_03507473.1| hypothetical protein RetlB5_19948 [Rhizobium etli Brasil 5]
          Length = 204

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 45/190 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++V+ PA     V      +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYETTHAAGTIVVDTPARRAYYVLGDGRAMRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + I R    P W    ++ +++                                   
Sbjct: 101 AGDAYIGRKAEWPSWTPTENMRRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y         +H T +P          +SGC+R+
Sbjct: 126 -ERYRKLAGGMPGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCIRM 181

Query: 347 --RNIIDLDV 354
              ++IDL  
Sbjct: 182 MNHDVIDLYD 191


>gi|62391939|ref|YP_227341.1| N-acetymuramyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
 gi|41223086|emb|CAF19031.1| N-ACETYMURAMYL-L-ALANINE AMIDASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 403

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 13/81 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 9   SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 68

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q   G+ PSG++D  TL A+ 
Sbjct: 69  QQARGVVPSGLIDDPTLRAIR 89



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 101 PLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               GN      V  ++  L   G       +   F      AV  +Q+ +G+   G+  
Sbjct: 101 AYQPGNQLVGDDVVEIQSHLQELGFYA--DRVDGHFGELTHKAVMNYQLNYGMQVDGICG 158

Query: 159 SSTLEAMNV 167
             T+ A++ 
Sbjct: 159 PDTIRALSR 167


>gi|126653377|ref|ZP_01725481.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. B14905]
 gi|126589893|gb|EAZ84024.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. B14905]
          Length = 277

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G       +   F      A++ FQ ++GL   G
Sbjct: 26  AFSDQQITRGAYGDDVIELQARLQYLGFYKS--KIDGKFGYNTYWALRNFQEKYGLPVDG 83

Query: 156 MVDSSTLE--AMNVPVDLRIRQLQVNL 180
           +  + T +  A     D +  + Q+N 
Sbjct: 84  IAGAKTKKTIAGYSDYDEKWVKAQLNA 110


>gi|152974458|ref|YP_001373975.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023210|gb|ABS20980.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 253

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           N  +   +  ++ PG    N + +  +   +     +H T          R E++GC+R+
Sbjct: 67  NKYKNKEYHRKKIPGGAPNNPLGTRWLGL-NEKEYAIHGTNREGTIG---RRESNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|218460779|ref|ZP_03500870.1| hypothetical protein RetlK5_15296 [Rhizobium etli Kim 5]
          Length = 104

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 6/65 (9%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
            + +       Q+ G+ N + +  +      R+  + +H T +P      +   +SGC+R
Sbjct: 1   EAAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---SSGCIR 57

Query: 346 VRNII 350
           + N  
Sbjct: 58  MMNAD 62


>gi|148239504|ref|YP_001224891.1| hypothetical protein SynWH7803_1168 [Synechococcus sp. WH 7803]
 gi|147848043|emb|CAK23594.1| Uncharacterized conserved secreted protein [Synechococcus sp. WH
           7803]
          Length = 157

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 52/164 (31%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             Q    + + +++    L  ++NGKV  R  V +G  +  TP     I           
Sbjct: 23  PMQARAEKTIEISLKQRYLTLLDNGKVVERFPVAIGAPESPTPSGSYAIT---------- 72

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                +K+                  +  + GK +                    PG  N
Sbjct: 73  -----RKEEAP---------------VYHKGGKVI-------------------APGPKN 93

Query: 307 AMASTKI-EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            +    +  F   +  Y +H T  P     +    + GC+R+ N
Sbjct: 94  PVGVRYMAYFQIGSGEYAIHGTAWPNWV-KLRAAVSLGCIRMLN 136


>gi|160878697|ref|YP_001557665.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160427363|gb|ABX40926.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 464

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S  SV +L+E+L    D+    P+      F     +AVK FQ +  L 
Sbjct: 378 SFPGYNLTIGSSGSSVMQLQEQLNAIADVYYPIPNVSADGIFGPATAAAVKAFQKQFNLP 437

Query: 153 PSGMVDSSTLEAMN 166
            SG+VD  T   ++
Sbjct: 438 QSGIVDLPTWYKIS 451


>gi|309389082|gb|ADO76962.1| Peptidase M23 [Halanaerobium praevalens DSM 2228]
          Length = 434

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +    + L +    V   ++ L I G       +   F    E A K FQ  + L   G
Sbjct: 23  SVSAFQVKLNDRGKEVIEAQKHLEILGY---EVAIDGIFGKSTEDAAKKFQAENNLQVDG 79

Query: 156 MVDSSTLEAMNVPVDLRI 173
           ++   TL  +   +  ++
Sbjct: 80  IIGGKTLSLLKEMISEKV 97


>gi|218133257|ref|ZP_03462061.1| hypothetical protein BACPEC_01122 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992130|gb|EEC58134.1| hypothetical protein BACPEC_01122 [Bacteroides pectinophilus ATCC
           43243]
          Length = 417

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L + G+   S  +      +      AV+ FQ    L  +
Sbjct: 333 PGSNLDIGSSGSKVRQIQEQLNLIGEFYSSIPVLIPDGIYGERTADAVRAFQKIFRLPQT 392

Query: 155 GMVDSSTL 162
           G+VD  T 
Sbjct: 393 GIVDYPTW 400


>gi|220921868|ref|YP_002497169.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219946474|gb|ACL56866.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 192

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 55/201 (27%), Gaps = 50/201 (24%)

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P   + +     M +  +           R             ++V      L  V   +
Sbjct: 22  PDPALSAQDAAWMAMVPEAEADP---RFARYLTDDPTGEPPGTIVVETKERQLYYVLPDR 78

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             +R  V VG          +R+ R    P W  P  ++++                   
Sbjct: 79  KAVRYGVTVGDEA-YGWTGTARVFRKAAWPDWNPPAEMVKR------------------- 118

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEP 329
                          W    P         G  N + +  +     +R+  Y +H T EP
Sbjct: 119 ---------------WPHVHPMK------GGPENPLGARALYLADGNRDTLYRIHGTNEP 157

Query: 330 ILFNNVVRFETSGCVRVRNII 350
                     +SGC+R+RNI 
Sbjct: 158 ERIGQ---AASSGCIRMRNID 175


>gi|288556068|ref|YP_003428003.1| spore cortex-lytic enzyme [Bacillus pseudofirmus OF4]
 gi|288547228|gb|ADC51111.1| spore cortex-lytic enzyme [Bacillus pseudofirmus OF4]
          Length = 348

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 2/92 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G +   V  L+ RL   G    +  +   +      AV+ +Q   GLD  G
Sbjct: 31  AFTDQVIQQGATGDDVVELQSRLQYIGFY--NGKIDGVYGWGTYWAVRNYQYEFGLDIDG 88

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           +V     E +    +   + ++  L   +K  
Sbjct: 89  LVGPEMKEMLAKSTEYNEQFVKRALNEGRKFT 120


>gi|85374415|ref|YP_458477.1| putative bacteriophage-acquired protein [Erythrobacter litoralis
           HTCC2594]
 gi|84787498|gb|ABC63680.1| putative bacteriophage-acquired protein [Erythrobacter litoralis
           HTCC2594]
          Length = 343

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 56/190 (29%), Gaps = 24/190 (12%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           L      I AS LD+   E         F            +          A   +  A
Sbjct: 142 LDAFVAFIKASRLDD---ELRRHDW-KAFARGY-NGPEYWKNKYDTKMARAFATFSEGGA 196

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              +          P R + +G+   SV  L+E L ++            F    +SAV 
Sbjct: 197 RTDN----------PQRVIRMGDKGQSVMHLQELLGLT--------KDGDFGPGTKSAVI 238

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV-PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
            FQ +  L P G+V   T  A+          +     +  +     ++  +   V    
Sbjct: 239 KFQKKAKLHPDGIVGGQTWAALLADTAAKPTTKRGKQDLAQRSRAPLRLHDKGDDVKFLQ 298

Query: 203 ASLEAVENGK 212
             L  +E+G 
Sbjct: 299 KLLGLIEDGD 308



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 28/118 (23%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIR--------------------PLHLGNS 107
           P      I   +KA      I+    W  L                       PL L + 
Sbjct: 231 PGTKSAVIKFQKKAKLHPDGIVGGQTWAALLADTAAKPTTKRGKQDLAQRSRAPLRLHDK 290

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V+ L++ L +  D          F     + VK FQ  +GL   G+V  +T   +
Sbjct: 291 GDDVKFLQKLLGLIED--------GDFGPATLARVKKFQQENGLVDDGIVGRNTWARL 340


>gi|23309016|ref|NP_602284.2| N-acetylmuramoyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
 gi|21325865|dbj|BAC00486.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium glutamicum ATCC
           13032]
          Length = 414

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 13/81 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 20  SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 79

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q   G+ PSG++D  TL A+ 
Sbjct: 80  QQARGVVPSGLIDDPTLRAIR 100



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 101 PLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               GN      V  ++  L   G       +   F      AV  +Q+ +G+   G+  
Sbjct: 112 AYQPGNQLVGDDVVEIQSHLQELGFYA--DRVDGHFGELTHKAVMNYQLNYGMQVDGICG 169

Query: 159 SSTLEAMNV 167
             T+ A++ 
Sbjct: 170 PDTIRALSR 178


>gi|298293120|ref|YP_003695059.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296929631|gb|ADH90440.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 170

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 42/154 (27%), Gaps = 44/154 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V+     L  V      +R  V VGR  +Q      RI+     P W  P  I +   
Sbjct: 40  IVVSARERRLYLVTGPGKAIRYPVAVGRRGKQ-WQGQVRISGKYVEPAWSPPAEIKR--- 95

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIE 314
                                               + P        G   N M +  + 
Sbjct: 96  ------------------------------------DNPKLPDVIPGGTRANPMGARAMT 119

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                   +H T +P        F + GCVR+ N
Sbjct: 120 LSGGGQYAIHGTNQPRSIGT---FASYGCVRMYN 150


>gi|323139215|ref|ZP_08074270.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322395513|gb|EFX98059.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 275

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 74/284 (26%), Gaps = 76/284 (26%)

Query: 92  GGWPELPIRPLHL--------GNSSVSVQRLRERLIISGDLDPSKGLSVA---FDAYVES 140
           G +P  P  P+          G S              G  +P          ++  +E 
Sbjct: 30  GAYPAYPSSPVRPYADQGGVYGESDPD----------DGYYEPPTRRPPRADAYERNLED 79

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI-------KKLLEQKMGL 193
             +  + R    P G        A   P         ++L          + L++   G 
Sbjct: 80  YPEDAEPRARAKPRGAEGRRARIAALPPDADPAYSTPIDLDDQVDPNQSTRTLVDDPTGQ 139

Query: 194 RYVL--VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           R     ++  A  L         L   V VGR   +     ++I R  + P W  P  ++
Sbjct: 140 RAGTLTIDTGARKLYLSLGNGEALEYGVGVGRQGFE-WKGVAQIGRKAYWPGWTPPSEML 198

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
            +                                        P+     + G  N + + 
Sbjct: 199 LRR---------------------------------------PDLPEHMEGGLDNPLGAR 219

Query: 312 KIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +            +H T EP          +SGC+R+ N   +
Sbjct: 220 ALYLFEGPKDTMFRIHGTNEPDTIGK---AVSSGCIRMLNADVI 260


>gi|148378889|ref|YP_001253430.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 3502]
 gi|153933529|ref|YP_001383270.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934554|ref|YP_001386819.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
 gi|148288373|emb|CAL82450.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929573|gb|ABS35073.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930468|gb|ABS35967.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A str.
           Hall]
 gi|322805217|emb|CBZ02781.1| protein erfK/srfK precursor [Clostridium botulinum H04402 065]
          Length = 125

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKS---VSNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            ++++N    +L       V     V VG+    TP  + +I     NP  
Sbjct: 16  YHIIINTQTHTLTLFRGNNVYRTYKVAVGKPSTPTPKGNFKIINRAINPGG 66


>gi|56963516|ref|YP_175247.1| hypothetical protein ABC1751 [Bacillus clausii KSM-K16]
 gi|56909759|dbj|BAD64286.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 171

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 9/66 (13%)

Query: 290 SPEPPNFIFRQDPG--KINAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGC 343
             E P +  +  PG    N + S  I F     +     +H T  P          ++GC
Sbjct: 74  KVEQPYYRKKNIPGGDARNPLGSRWIGFDALGTAGRTYGLHGTNRPGSIGYS---ASAGC 130

Query: 344 VRVRNI 349
           +R+ N 
Sbjct: 131 IRLANP 136


>gi|86751770|ref|YP_488266.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86574798|gb|ABD09355.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 201

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 52/193 (26%), Gaps = 48/193 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L +             ++V      L  V+     LR  + VGR   Q      +I+R  
Sbjct: 53  LRKQMVFFRTSEPAGTIVVQTAERYLYLVQGNNRALRYGIGVGREGFQ-WQGLLKISRKA 111

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P WV P  +IQ+                                        P     
Sbjct: 112 EWPDWVPPPEMIQRQ---------------------------------------PYLPRF 132

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
              G  N + +  +   S    Y +H T  P          +SGC R+ N    DL   +
Sbjct: 133 MAGGPGNPLGARAMYLGS--TIYRIHGTNRPDTIGT---AISSGCFRLVNADVADLYERV 187

Query: 357 LKDTPTWSRYHIE 369
              T    R   E
Sbjct: 188 PVGTKVVVRQRPE 200


>gi|150014928|ref|YP_001307182.1| peptidoglycan binding domain-containing protein [Clostridium
            beijerinckii NCIMB 8052]
 gi|149901393|gb|ABR32226.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
            NCIMB 8052]
          Length = 1061

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 6/109 (5%)

Query: 91   RGGWPELPIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQM 147
             G     P  PL +G+S  +V+ ++ +L  I     L P       F+     AVK FQ 
Sbjct: 937  SGSPQSYPGEPLTIGSSGPAVRTIQNQLNRIARNYPLIPKVAEDGQFNQKTADAVKTFQQ 996

Query: 148  RHGLDPSGMVDSSTLEAMN---VPVDLRIRQLQVNLMRIKKLLEQKMGL 193
               L  +G+VD +T   ++   V V         +++R    + + +  
Sbjct: 997  IFTLPQTGIVDYATWYRISDIYVGVSRIAELRDSSMLRSSLGMNEFIPP 1045


>gi|312127038|ref|YP_003991912.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777057|gb|ADQ06543.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 223

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKELGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 30/109 (27%), Gaps = 16/109 (14%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+    I         GK      V        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKEGILYKSYPISPGKPSTPTPVGTFKIISKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
              R     +H T             + GCVR+  +++ +L  ++   T
Sbjct: 92  LNVRYGKYGIHGTIYESYIGA---HVSKGCVRMLNKDVKELFSYIPIGT 137


>gi|295696513|ref|YP_003589751.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
 gi|295412115|gb|ADG06607.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus tusciae DSM 2912]
          Length = 216

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 12/87 (13%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVV 336
           G+      +           +           +  +        Y +H T  P       
Sbjct: 60  GRPDSPTPIGHWKVINKYKNW------GGGFGTRWLGLNVPWGIYGIHGTNRPHSIGWS- 112

Query: 337 RFETSGCVRVRN--IIDLDVWLLKDTP 361
              ++GC+R+RN  + +L   +   TP
Sbjct: 113 --ASAGCIRMRNQDVEELYEMIRVGTP 137



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  +++RL   G        +  F    ++A+K F+    L   G+V  
Sbjct: 149 RRLKDGDIGTDVWLVQDRLRRLGFY--RGPCNGRFSLSTQAALKAFERSQHLPVDGVVSV 206

Query: 160 STLEAMN 166
               A+ 
Sbjct: 207 RDYHALG 213


>gi|86356808|ref|YP_468700.1| hypothetical protein RHE_CH01168 [Rhizobium etli CFN 42]
 gi|86280910|gb|ABC89973.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 244

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   Q+     R + L         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEQIDPRYYRQRVLDPTGQPPGTIVVDTPSRFLYLVQADGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 138 WQGSGVIQWRQKWPRWKPPNEMVARQ----------------------------PELVKY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           +PG  N + +  +  F +  +  Y +H  P+           +SGCVR
Sbjct: 170 SIENGGM-----EPGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LLNQDIIDLYDRVPTKAP 239


>gi|168178292|ref|ZP_02612956.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|168184118|ref|ZP_02618782.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|226948166|ref|YP_002803257.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|237794190|ref|YP_002861742.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
 gi|182670899|gb|EDT82873.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum NCTC
           2916]
 gi|182672811|gb|EDT84772.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Bf]
 gi|226841594|gb|ACO84260.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum A2 str.
           Kyoto]
 gi|229261214|gb|ACQ52247.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum Ba4 str.
           657]
          Length = 125

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKS---VSNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +++N  A +L    N  V     V VG+    TP    +I     NP  
Sbjct: 16  YRIVINTKAHTLTLFRNNNVYKTYKVAVGKPSTPTPKGTFKIINRAINPGG 66


>gi|153941218|ref|YP_001390250.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|152937114|gb|ABS42612.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           Langeland]
 gi|295318345|gb|ADF98722.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium botulinum F str.
           230613]
          Length = 125

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNNPSSIGKS---VSNGCIRMFNNQVIELSNIVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            ++++N  A +L   ++  V     V VG+    TP    +I     NP  
Sbjct: 16  YHIIINTQAHTLTLFKDNNVYKTYKVAVGKPSTPTPKGTFKIINRAINPGG 66


>gi|158321448|ref|YP_001513955.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs]
 gi|158141647|gb|ABW19959.1| ErfK/YbiS/YcfS/YnhG family protein [Alkaliphilus oremlandii OhILAs]
          Length = 254

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G+    V  ++ RL   G  D    L   +  ++E A+  FQ  H +  +  ++  T +
Sbjct: 188 PGDFGADVLEIQNRLRAYGYYDVE-HLDGKYGPHMEQALYQFQKDHNIPKNPHIEYDTYK 246

Query: 164 AMNV 167
           A+ V
Sbjct: 247 ALGV 250



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 35/123 (28%), Gaps = 16/123 (13%)

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIFRQ 300
                      ++  + +   YL + N  +       GK      +              
Sbjct: 55  ITDNPEYEDIRVLIDISEKRLYLMNGNDLVKIYPVATGKLDTPTPIGTWKVVHKAKW--- 111

Query: 301 DPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLL 357
                    +  +          +H T +P    +     ++GCVR+ N  + DL  ++ 
Sbjct: 112 ----GGGFGTRWMGLNVPWGTYGIHGTNKPNSIGSN---ASAGCVRMNNTDVEDLYKYVK 164

Query: 358 KDT 360
            +T
Sbjct: 165 HNT 167


>gi|154246416|ref|YP_001417374.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154160501|gb|ABS67717.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 200

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 66/229 (28%), Gaps = 61/229 (26%)

Query: 150 GLDPSGMVDSSTLEAMNVPVD-LRIRQLQVN-----------LMRIKKLLEQKMGLRYVL 197
           GL  SG +   T           R +QL  N             R             ++
Sbjct: 12  GLMLSGCMS-ETYAPAPESAQTARDKQLLANKPYPNVKPSGDYARHIVEYPTNKKPGTIV 70

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           ++ P   L  VE     +R  V VG          +++ R    P W     I Q     
Sbjct: 71  IDTPNKFLYYVEGNGKAIRYGVTVGEES-LAFRGQAKVGRKAEWPSWTPTPEIHQ----- 124

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-- 315
            +   P Y+                                   PG  N M +  +    
Sbjct: 125 RIAGLPSYVA----------------------------------PGPHNPMGARALYLYQ 150

Query: 316 YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +++  + +H T +P          +SGC+R+   ++IDL   +   T 
Sbjct: 151 GNQDTLFRIHGTNQPEYLGQ---AISSGCIRMLNEDVIDLYSRVPTGTE 196


>gi|302872405|ref|YP_003841041.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575264|gb|ADL43055.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 223

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E AV L+Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKKLGFYSGS--IDGKYGAALEYAVNLYQKKNKLPVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 31/124 (25%), Gaps = 16/124 (12%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+    I         GK      V        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKEGILYKSYPISPGKPSTPTPVGTFKIISKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
                    +H T             + GCVR+  +++ +L  ++   T       I   
Sbjct: 92  LNVVYGKYGIHGTIYENYIGA---HVSKGCVRMLNKDVKELFSYISVGTTVVISEGIYGE 148

Query: 372 VKTR 375
            +  
Sbjct: 149 FRNG 152


>gi|190891021|ref|YP_001977563.1| hypothetical protein RHECIAT_CH0001405 [Rhizobium etli CIAT 652]
 gi|190696300|gb|ACE90385.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
 gi|327192851|gb|EGE59776.1| hypothetical protein RHECNPAF_189002 [Rhizobium etli CNPAF512]
          Length = 204

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 45/190 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++V+ PA     V      +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYETTHAAGTIVVDTPARRAYYVLGDGRAMRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + I R    P W    ++ +++                                   
Sbjct: 101 AGDAYIGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y         +H T +P          +SGC+R+
Sbjct: 126 -ERYRKLAGGMPGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCIRM 181

Query: 347 --RNIIDLDV 354
              ++IDL  
Sbjct: 182 MNHDVIDLYD 191


>gi|158422818|ref|YP_001524110.1| ErfK/YbiS/YcfS/YnhG precursor [Azorhizobium caulinodans ORS 571]
 gi|158329707|dbj|BAF87192.1| ErfK/YbiS/YcfS/YnhG precursor [Azorhizobium caulinodans ORS 571]
          Length = 200

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 65/221 (29%), Gaps = 59/221 (26%)

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR---YVLVNIPA---- 202
           G+  +G   +    A    +  R +QL  N    K   E +   +   Y     P     
Sbjct: 12  GIVLAGCQTNQLQPAPEASLKPRDKQLLANAPYPKVKPEGEFARQIVSYSGKEKPGTIVV 71

Query: 203 ----ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
                 L  V+     +R  V VG          +++ R    P W     I Q      
Sbjct: 72  DTDKRMLYYVQGDGTAIRYGVTVGEES-LAFRGEAKVGRKAEWPSWTPTPEIHQ-----R 125

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--Y 316
           +   P Y+                                    G  N M +  +     
Sbjct: 126 IAGLPSYVN----------------------------------GGPQNPMGARALYLYQG 151

Query: 317 SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           +R+  + +H T +P L        +SGC+R+   ++IDL  
Sbjct: 152 NRDTLFRIHGTNQPELLGQ---AISSGCIRMLNEDVIDLFN 189


>gi|91978152|ref|YP_570811.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91684608|gb|ABE40910.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 193

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 46/167 (27%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +     K     ++++     L  VE     LR  + VGR D        RI      
Sbjct: 51  RERVNFIGKYAPGTIVISTAERRLYLVEPDGTALRYGIGVGR-DGFRWAGTHRITAKKEW 109

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 110 PSWTPPAQMLRRR---------------------------------------PDLPRHMA 130

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G+ N + +  +         +H + EP          +SGC R+ N
Sbjct: 131 GGEDNPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTN 173


>gi|288554783|ref|YP_003426718.1| murein binding protein [Bacillus pseudofirmus OF4]
 gi|288545943|gb|ADC49826.1| murein binding protein [Bacillus pseudofirmus OF4]
          Length = 165

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 59/169 (34%), Gaps = 12/169 (7%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            Y  + +P  +L ++           I+       P +      I+  P    P  I   
Sbjct: 1   MYQHIVLPGETLFSISED-YRTPYQAILAANQIPNPNMIYVGQPIVI-PGIPDPALIPYF 58

Query: 254 DMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI 313
             +++  +     ++  +  +      + V  + +++P     I  ++P       +  +
Sbjct: 59  IDVSISNRTLSLYENEQLQKVY----PIAVGRMLYDTPVGEFIIVNREPNPGGPFGTLWL 114

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
               + +  +H T +P    +     + GC+R+  +++ +L   +   T
Sbjct: 115 SLS-KKSYGIHGTNDPSSIGH---AVSKGCIRMFNQDVEELGSIVPNGT 159


>gi|169827478|ref|YP_001697636.1| spore cortex-lytic enzyme (SCLE) [Lysinibacillus sphaericus C3-41]
 gi|168991966|gb|ACA39506.1| Spore cortex-lytic enzyme precursor (SCLE) [Lysinibacillus
           sphaericus C3-41]
          Length = 277

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 4/87 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G       +   F      A++ FQ ++GL   G
Sbjct: 26  AFSNQQITRGAYGDDVIELQARLQYLGFYKS--KIDGKFGYNTYWALRNFQEKYGLPVDG 83

Query: 156 MVDSSTLE--AMNVPVDLRIRQLQVNL 180
           +  + T +  A     D +  + Q+N 
Sbjct: 84  IAGAKTKKTIAGYSDYDEKWVKAQLNA 110


>gi|265996616|ref|ZP_06109173.1| ErfK/YbiS/YcfS/YhnG family protein [Brucella ceti M490/95/1]
 gi|262550913|gb|EEZ07074.1| ErfK/YbiS/YcfS/YhnG family protein [Brucella ceti M490/95/1]
          Length = 79

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
           +     +      R D G  N + +  +         +H T +P      +   +SGC+R
Sbjct: 2   IARERKKGRFLPARMDGGINNPLGARALYLG-STLYRIHGTNQPWTIGKAM---SSGCIR 57

Query: 346 VRN 348
           +RN
Sbjct: 58  MRN 60


>gi|254488253|ref|ZP_05101458.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. GAI101]
 gi|214045122|gb|EEB85760.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. GAI101]
          Length = 183

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 6/52 (11%)

Query: 300 QDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
           Q  G  N + +  +  F +  +TY  +H T +P       R  ++GC+R+ N
Sbjct: 116 QPGGPDNPLGARALYLFQNGRDTYFRIHGTTQPSSIG---RSVSNGCIRMIN 164


>gi|83944388|ref|ZP_00956842.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
 gi|83953429|ref|ZP_00962151.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83842397|gb|EAP81565.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83844711|gb|EAP82594.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
          Length = 183

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 300 QDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           Q  G  N + +  +  F +  +TY  +H T +P       R  ++GC+R+   ++ DL  
Sbjct: 116 QPGGPSNPLGARALYLFQNGRDTYFRIHGTTQPSSIG---RSVSNGCIRMLNEHVKDLYQ 172

Query: 355 WLLKDTP 361
            +   T 
Sbjct: 173 RVPIGTK 179


>gi|301058095|ref|ZP_07199147.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
 gi|300447727|gb|EFK11440.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
          Length = 544

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIIS---GDLD-PSKGLSVAFDAYVESAVKLFQMRHG 150
           P +    L  G+S   V+ L+ +L       D        S  FD  +ES V  FQ    
Sbjct: 456 PPIKSAILKKGDSGPDVRWLKAQLNRVEGGNDPSVSDTAESNVFDDILESRVMNFQRSCA 515

Query: 151 LDPSGMVDSSTLEAMNVP 168
           + P G+V   TL  +  P
Sbjct: 516 VLPDGIVGEQTLIQLTKP 533


>gi|225018050|ref|ZP_03707242.1| hypothetical protein CLOSTMETH_01986 [Clostridium methylpentosum
           DSM 5476]
 gi|224949196|gb|EEG30405.1| hypothetical protein CLOSTMETH_01986 [Clostridium methylpentosum
           DSM 5476]
          Length = 456

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V  L+  L + G      P   ++  F      AV+ FQ   GL  +
Sbjct: 372 PGYYLTEGASGEDVTNLQTYLALIGRTYTNLPEIPVTGNFGPQTAEAVRAFQRDFGLPVT 431

Query: 155 GMVDSSTLEAMN 166
           G V   T + + 
Sbjct: 432 GSVGPVTWQRIA 443



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 34/115 (29%), Gaps = 16/115 (13%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
            +P  P L  G S V V+ ++  L +     P      +   F      AV+ FQ    +
Sbjct: 275 TVPYPPTLQEGMSGVEVRTIQYYLSVLSYFYPEIPFVQIDGIFGPATREAVQAFQRMVNI 334

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
              G+V + T   +       I  L               G    +   P   L 
Sbjct: 335 PSDGIVGAQTWNNLQRVYYDVINSL----------PPGYQGEGATVY--PGYYLT 377



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P   L +G +   V+ ++ +L  I +    +         F      +V+ FQ    L  
Sbjct: 180 PGVALRVGMAGNDVKTIQTQLNRIANNYPSIPKIPSTDGIFGESTARSVREFQRIFNLTQ 239

Query: 154 SGMVDSSTL-------EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
            G+V  ST         A+    +L    L+V  + +      + G+  V V      L 
Sbjct: 240 DGIVGKSTWYKIKYIFTAVKQLGELASEGLRVEEVTVPYPPTLQEGMSGVEVRTIQYYLS 299

Query: 207 A 207
            
Sbjct: 300 V 300


>gi|313900439|ref|ZP_07833932.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312954501|gb|EFR36176.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 356

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQM 147
            G W     + L  G+  + VQ+L+  L IIS      PS  +   F   ++ AV+ +Q 
Sbjct: 273 TGLW---TGKVLRQGDVGIEVQQLQYFLSIISESYPSIPSVTVDSRFGPGLDRAVRAYQR 329

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRI 173
             GL   G+V   T  ++       +
Sbjct: 330 EFGLAVDGLVGRYTWNSIYETYAAIV 355



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P   L L +S   V  ++E L  I      +         F    ESAV+ FQ +  
Sbjct: 175 PSYPGYALRLESSGQPVFIIQELLNGIAVNYPNIPLIYPPDAVFGPQTESAVRAFQRQFD 234

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+V  ST   ++ 
Sbjct: 235 LTVDGIVGQSTWYQISR 251


>gi|269792192|ref|YP_003317096.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099827|gb|ACZ18814.1| ErfK/YbiS/YcfS/YnhG family protein [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 228

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
            S  I FY+     +H T  P          T GC+R+RN  I  L  ++ K T  W
Sbjct: 113 GSKLISFYNPWQIAIHGTNSPSSIGKR---VTHGCIRMRNRDIETLVTYIGKGTRIW 166


>gi|209886032|ref|YP_002289889.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209874228|gb|ACI94024.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 240

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 20/110 (18%)

Query: 287 DWNSPEPP----NFIFRQDPGKINAMASTKIEFYS--RNNTY-MHDTPEPILFNNVVRFE 339
           DW+  +              G  N M S  I  YS  ++  + +H T +P          
Sbjct: 133 DWHPTKSEIERLGVPTFVKGGPDNPMGSRAIYLYSGGKDTLFRIHGTNQPEYIGAS---I 189

Query: 340 TSGCVRVRN--IIDLDV--------WLLKDTPTWSRYHIEEVVKTRKTTP 379
           +SGC+R+ N  +IDL           +L+     S ++ +  ++   T  
Sbjct: 190 SSGCIRMTNEDVIDLYSRVKMGAIVVVLEPKQGDSPFNSKMALQGGNTLY 239


>gi|148242241|ref|YP_001227398.1| hypothetical protein SynRCC307_1142 [Synechococcus sp. RCC307]
 gi|147850551|emb|CAK28045.1| Uncharacterized conserved secreted protein [Synechococcus sp.
           RCC307]
          Length = 181

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 50/159 (31%), Gaps = 33/159 (20%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++   +G+V     V VGR D  TP+    ++R+M NP W  P +          +  P
Sbjct: 48  KVKVFHDGQVVATFPVAVGRSDAPTPLGEHTVHRMMKNPVWSSPWTGR--------QVKP 99

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYM 323
             L       I           +D N            PG  N                 
Sbjct: 100 HALGPIGTRWIGFWYTCGNRSSLDAN-------PPVFRPGACN-------------EIGF 139

Query: 324 HDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
           H T             ++GCVR+  R+ + L   + + T
Sbjct: 140 HGTGSVKSIGT---AASNGCVRMFDRDAVALYDLVKEGT 175


>gi|298244048|ref|ZP_06967855.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297557102|gb|EFH90966.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 368

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 10/111 (9%)

Query: 70  ISKETIAQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
            S+ET    +  +     +   G      WP+L       G+   +V  L+ +L  +G  
Sbjct: 72  YSQETSDAVKS-LQHKDTLSENGLVGALTWPKLIKAT-SSGSQGYTVMALQHQLNQAGF- 128

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                +   F +  E AV+ +Q +  L   G+    T + +      R ++
Sbjct: 129 --HLNVDGVFGSDTEKAVRAYQQQVSLSVDGVAGVRTWQYLLAATAAREKK 177


>gi|298292514|ref|YP_003694453.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296929025|gb|ADH89834.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 210

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 56/212 (26%), Gaps = 51/212 (24%)

Query: 156 MVDSSTLEAMNVP---VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
            + +  ++    P         QL     R             ++++     L  V+   
Sbjct: 35  TLGNKIVDVPEKPGYVPSAEEEQLDPAFRRQPVYFRTNEAPGTIIIHTNERFLYFVQGDN 94

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             LR  + VGR   Q      +++R    P W  P  +IQ+                   
Sbjct: 95  RALRYGIGVGRDGFQ-WSGLQKVSRKAEWPDWTPPPEMIQRQ------------------ 135

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPIL 331
                                P        G  N M +  +   S    Y +H T  P  
Sbjct: 136 ---------------------PYLPRWMAGGPGNPMGAAALYLGS--TVYRIHGTNMPDT 172

Query: 332 FNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
                   +SGC R+ N    DL   +   T 
Sbjct: 173 IGM---AVSSGCFRLINPDVQDLFNRVPVGTK 201


>gi|291563072|emb|CBL41888.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SS3/4]
          Length = 412

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   V++L+E+L       +  P       +      AV+ FQ   GL  +
Sbjct: 328 PGYDLKIGATGDKVRQLQEQLDAISSVYNAIPDISPDGIYGPATAEAVRKFQSIFGLPQT 387

Query: 155 GMVDSSTL 162
           G+VD +T 
Sbjct: 388 GVVDFATW 395


>gi|153010573|ref|YP_001371787.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562461|gb|ABS15958.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 256

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 63/200 (31%), Gaps = 46/200 (23%)

Query: 172 RIRQLQVNLMRIKKL-----LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
            I ++ V+ +  K                V+V+ P   L  V+      R  V VGR   
Sbjct: 78  PIPEVDVSKVDPKWWRTEVDYPTDERAGIVIVDTPNRYLYHVQPHGRATRYGVGVGRDGF 137

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
                   I      P W  P  ++ +     L   P  + +  +               
Sbjct: 138 SWAGRGRHIAYKREWPRWTPPDEMVARQ--PELE--PYSIANGGM--------------- 178

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGC 343
                         DPG  N + +  +  +  +R+  Y +H  PE           +SGC
Sbjct: 179 --------------DPGLKNPLGARALYIHEGNRDTIYRIHGNPEFWTIGQ---AVSSGC 221

Query: 344 VRV--RNIIDLDVWLLKDTP 361
           +R+  +++I L   +   +P
Sbjct: 222 IRMINQDVIHLADNVRDGSP 241


>gi|296333268|ref|ZP_06875721.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675228|ref|YP_003866900.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149466|gb|EFG90362.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413472|gb|ADM38591.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 250

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          +V +L++ L            + G+   +     +AVK FQ+ 
Sbjct: 169 PLPSGVIKLTSPYRKGTNVLQLQKALAALHFYPDKGAKNNGIDGVYGPKTANAVKRFQLL 228

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+    T   + 
Sbjct: 229 NGLAADGIYGPKTKAKLK 246


>gi|294500739|ref|YP_003564439.1| Endopeptidase [Bacillus megaterium QM B1551]
 gi|294350676|gb|ADE71005.1| Endopeptidase [Bacillus megaterium QM B1551]
          Length = 225

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  + L  G +   V++L++ L   G    +            SAVK FQ ++GL   G
Sbjct: 25  ALGDQTLRQGMNHQDVKQLQQTLKNKGYFKGNTTTYFG--TVTTSAVKSFQRKNGLAADG 82

Query: 156 MVDSSTLEAMNV 167
           +V   T   + V
Sbjct: 83  IVGKGTYAKLGV 94


>gi|254478173|ref|ZP_05091555.1| C-terminal processing peptidase subfamily, putative
           [Carboxydibrachium pacificum DSM 12653]
 gi|214035902|gb|EEB76594.1| C-terminal processing peptidase subfamily, putative
           [Carboxydibrachium pacificum DSM 12653]
          Length = 470

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 25/144 (17%)

Query: 63  IDSDIPIISKETIAQTEKAIAFY-----QDILSRGGWPEL------------PIRPLHLG 105
           + S +P+        T   IA Y     + I   G  P++                L +G
Sbjct: 332 VQSVVPLQDGSGFKLT---IARYKLPSGRYIGKEGLTPDVYVKNVQYTADIKFAGELKIG 388

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    V+ L++ L +      +      F     +AVK  Q + GL P+G+ D +T  A+
Sbjct: 389 SRGNEVKILQKYLNLLKF--NAGPEDGIFGPKTANAVKELQKKAGLSPTGVFDKNTYNAL 446

Query: 166 NV---PVDLRIRQLQVNLMRIKKL 186
                 ++ +   L+  L  ++ +
Sbjct: 447 LKMIDSLNNKDAVLEKALELLRNM 470


>gi|188582248|ref|YP_001925693.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179345746|gb|ACB81158.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 241

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 54/199 (27%), Gaps = 50/199 (25%)

Query: 162 LEAMNVPVDLRIRQLQVN----LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             A+          +         R     +       ++++  A  L  ++ G   +R 
Sbjct: 76  FAALPTGPAPEEATVARAVDPRYARQVVAYDGPGRAGQIVIDTNAKYLYLIQPGGQAIRY 135

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR           I+     P W  P  ++++                        
Sbjct: 136 GIGVGRPGFV-WTGAKTISAKREWPDWTPPAEMLRRR----------------------- 171

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                           P+       G  N + +  +   +     +H T EP        
Sbjct: 172 ----------------PDLPRHMAGGPENPLGARAMYLGTS-LYRIHGTNEPHTIGQN-- 212

Query: 338 FETSGCVRV--RNIIDLDV 354
             +SGC+R+   ++IDL  
Sbjct: 213 -VSSGCIRMMNEDVIDLYE 230


>gi|148242142|ref|YP_001227299.1| hypothetical protein SynRCC307_1043 [Synechococcus sp. RCC307]
 gi|147850452|emb|CAK27946.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 165

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 51/160 (31%), Gaps = 33/160 (20%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  ++NG+      V VGR    TP+   R++R+  +P W  P    +K  +A     
Sbjct: 31  RQLRVIQNGRQIASYPVAVGRATNPTPLGTHRVHRLEKDPIWSSP---WRKRQVAASATG 87

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           P   +                    W      +   R+ P         + E  +     
Sbjct: 88  PLGTRWIGF----------------WYRCGKRSSTDRRPP---------RFEADNCREIG 122

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            H T +           T GCVR+RN   I L   + +  
Sbjct: 123 FHGTGKLSSIGQ---AATFGCVRLRNQDAISLFDLVKEGD 159


>gi|114567574|ref|YP_754728.1| hypothetical protein Swol_2063 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338509|gb|ABI69357.1| hypothetical protein Swol_2063 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 434

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V  ++++LI  G    +   +  +D      V  FQ  H L+ +G+  + T
Sbjct: 358 LKEGFTGDDVLEMQQQLIALGY---NCQANKVYDGQTRDMVAEFQSDHRLEVTGIATAET 414

Query: 162 LEAMN 166
              + 
Sbjct: 415 RALLQ 419


>gi|149189054|ref|ZP_01867342.1| putative general secretion pathway protein A [Vibrio shilonii AK1]
 gi|148837017|gb|EDL53966.1| putative general secretion pathway protein A [Vibrio shilonii AK1]
          Length = 554

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 2/96 (2%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            ++ I+  +  +           W       L L      V+ L E+L     L  +   
Sbjct: 441 GQQRISLPKSWLEQLWTGEYYSIWQRELQTTLRLNQQGAQVRLLDEKLSKV--LGGTPSG 498

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S  FD  ++  V++FQ    +D  G+   +TL  + 
Sbjct: 499 SDIFDEALKRKVEIFQRWQNIDVDGIAGRNTLRKLE 534


>gi|170751777|ref|YP_001758037.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658299|gb|ACB27354.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 269

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 54/183 (29%), Gaps = 46/183 (25%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R +     +     ++++     L  V+ G+  LR  + VGR           ++R  
Sbjct: 126 YQRQEVAFAGRQKPGTIVIDTAGKHLYLVQAGQRALRYGIGVGRPGFA-WSGLKTVSRKA 184

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  ++ +                                        P+    
Sbjct: 185 EWPDWTPPAEMLARR---------------------------------------PDLPRH 205

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLL 357
              G  N + +  +   S     +H T EP          +SGC+R+ N  +IDL   + 
Sbjct: 206 MAGGPENPLGARALYLGSS-LYRIHGTNEPNTIGQS---VSSGCIRMMNDDVIDLYDRVP 261

Query: 358 KDT 360
             T
Sbjct: 262 VGT 264


>gi|220925047|ref|YP_002500349.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949654|gb|ACL60046.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 215

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 49/167 (29%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K G   ++V+     L  V    + +R  V VGR    T     R+      
Sbjct: 73  RELVPFGNKYGPGTIVVSTSERRLYYVLGDGMAIRYGVGVGRPG-FTWSGTKRVVAKREW 131

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P     K+M+A     P+Y+                                   
Sbjct: 132 PSWTPP-----KEMLARRPDLPRYMA---------------------------------- 152

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 153 GGIDNPLGARAMYIG-GTLYRIHGSNEPDTIGQ---AVSSGCIRMTN 195


>gi|159898672|ref|YP_001544919.1| peptidoglycan binding domain-containing protein [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891711|gb|ABX04791.1| Peptidoglycan-binding domain 1 protein [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 306

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+    W  L +  +  G++  +V+ ++  L      +    +  AF A  ESAVK FQ
Sbjct: 81  GIVGPNTWNALIV-TVRRGDNGNAVKAVQTLLNAK--RNAGLTVDGAFGAGTESAVKSFQ 137

Query: 147 MRHGLDPSGMVDSSTLE 163
              GL   G+V  +T +
Sbjct: 138 SHAGLSADGVVGPTTWK 154



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 15/96 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  GN    V+ ++  L I             F +  ES+VK FQ   GL   G+V  +
Sbjct: 35  TISKGNRGTDVKAMQYLLNI--------SADGVFGSGTESSVKSFQSSRGLGADGIVGPN 86

Query: 161 TLEAMNVPV-------DLRIRQLQVNLMRIKKLLEQ 189
           T  A+ V V        ++  Q  +N  R   L   
Sbjct: 87  TWNALIVTVRRGDNGNAVKAVQTLLNAKRNAGLTVD 122


>gi|256785704|ref|ZP_05524135.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289769597|ref|ZP_06528975.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289699796|gb|EFD67225.1| serine/threonine protein kinase [Streptomyces lividans TK24]
          Length = 452

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G W       +  G+    V+ L+  L     +     +   F    + AV  FQ R G
Sbjct: 376 SGTWDF----TIARGDGGSQVRELQCLLRYLHGITAVGEVDGDFGPMTQGAVLTFQERAG 431

Query: 151 LDPSGMVDSSTLEAMN 166
           LD  G+V  +T  A+ 
Sbjct: 432 LDADGIVGPATWRALR 447


>gi|159043497|ref|YP_001532291.1| peptidoglycan-binding domain 1 protein [Dinoroseobacter shibae DFL
           12]
 gi|157911257|gb|ABV92690.1| peptidoglycan-binding domain 1 protein [Dinoroseobacter shibae DFL
           12]
          Length = 260

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V+ L++ L ++  L     +  AF     +AV  FQ  +GL   G+V  +T  A
Sbjct: 200 GDRGRIVEDLQQALNLA--LGLDLDVDGAFGPATRAAVMEFQRVNGLTVDGIVGPNTQAA 257

Query: 165 MNV 167
           + +
Sbjct: 258 LGM 260


>gi|295314768|gb|ADF97534.1| PlyM9 [uncultured phage]
          Length = 343

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 221 GDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGS--- 274

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKM 191
                  ++  +  NL +   +     
Sbjct: 275 -----QAKLNAILANLNKKPVVNPAAP 296


>gi|317128557|ref|YP_004094839.1| spore cortex-lytic enzyme [Bacillus cellulosilyticus DSM 2522]
 gi|315473505|gb|ADU30108.1| spore cortex-lytic enzyme [Bacillus cellulosilyticus DSM 2522]
          Length = 372

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +   V  L+ RL   G       +   F      AV+ +Q   G++ +G+V  +T
Sbjct: 39  IQRGATGDDVVELQARLQYIGFY--EGDIDGVFGWGTYWAVRNYQQEFGMEVTGLVGENT 96

Query: 162 LEAMNVPVD 170
              +    D
Sbjct: 97  KAMLERSTD 105


>gi|290960881|ref|YP_003492063.1| peptidodoglycan-binding membrane protein [Streptomyces scabiei
           87.22]
 gi|260650407|emb|CBG73523.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           scabiei 87.22]
          Length = 379

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--- 154
             + L  G+    V  L+ RL   G    +  +   +D+ VE AV ++Q   G+      
Sbjct: 303 APKTLRPGDDDPEVTELQLRLSQLGIY--TGDIDDNYDSQVEQAVLVYQSSRGITKDQDE 360

Query: 155 -GMVDSSTLEAMNVPVDLR 172
            G+    T E +       
Sbjct: 361 PGVYGLVTRERLESETKEP 379


>gi|52080803|ref|YP_079594.1| spore cortex-lytic enzyme [Bacillus licheniformis ATCC 14580]
 gi|52786173|ref|YP_092002.1| hypothetical protein BLi02431 [Bacillus licheniformis ATCC 14580]
 gi|52004014|gb|AAU23956.1| spore cortex-lytic enzyme [Bacillus licheniformis ATCC 14580]
 gi|52348675|gb|AAU41309.1| SleB [Bacillus licheniformis ATCC 14580]
          Length = 321

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 31  AFSEQVIQRGATGDDVIELQARLQYNGYY--NGRIDGVYGWATYWAVRNFQNQFGLRDTD 88

Query: 155 GMVDSSTLE 163
           G+V   T  
Sbjct: 89  GLVGPKTKR 97


>gi|312792945|ref|YP_004025868.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180085|gb|ADQ40255.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 223

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++   V  ++ RL   G    S  +   + A +E A+ LFQ ++ L  +  +  
Sbjct: 154 RTIYPGDTGEDVMAVQRRLKELGFYSGS--IDGKYGAALEYAINLFQKKNKLSVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 32/124 (25%), Gaps = 16/124 (12%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+    I         GK      V        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKEGILYKSYPISPGKPSTPTPVGTFKIISKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
              R     +H T             + GCVR+  +++ +L  ++   T       I   
Sbjct: 92  LNVRYGKYGIHGTIYESYIGA---HVSKGCVRMLNKDVKELFSYIPIGTTVIVSEGIYGE 148

Query: 372 VKTR 375
            +  
Sbjct: 149 FRNG 152


>gi|285808600|gb|ADC36119.1| putative lipoprotein [uncultured bacterium 253]
          Length = 273

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 62/238 (26%), Gaps = 73/238 (30%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V+    RL   G    +  +   FD   +SA+  FQ   G   +G +  + L+A+   
Sbjct: 31  SEVREAERRLSDLGYW--TGTIDGVFDPGTKSALIAFQKWEGRPITGELTPNELQAIRTS 88

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              + R                 G  ++ V++    L  V +        V  G      
Sbjct: 89  APPKAR---------------DFGYAHIEVDLDRQVLMVVNDAGGVRVLPVATGNE---- 129

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                                   K  +   ++   +       + D+        E  W
Sbjct: 130 ------------------------KQFIDEGQESVAHTPRGRFVVYDK--------EFGW 157

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           ++                ++ +     +      +H        N      + GC+RV
Sbjct: 158 HT---------------GSLGAVYYANFISGGVAIHG-----SRNVPNAPASHGCIRV 195


>gi|326803551|ref|YP_004321369.1| peptidase, S41 family [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650259|gb|AEA00442.1| peptidase, S41 family [Aerococcus urinae ACS-120-V-Col10a]
          Length = 497

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             E  +  Y ++    G      +   LG  S  ++ ++ +L + G L+  +     FD 
Sbjct: 388 DIEAKLPDYSELSLVDG-----SQNYQLGEESDKIKNIQAQLALLGYLESDQVQ-GKFDE 441

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             ++A+  FQ  H L+ +G V+  T +A+     LR   L  +  + K
Sbjct: 442 QTQTALGAFQADHELEKTGQVNDETAQALTR--ALRDYILAHDTQKDK 487


>gi|311032644|ref|ZP_07710734.1| putative cell wall endopeptidase [Bacillus sp. m3-13]
          Length = 215

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           EL  + L  G     V+ L++ L   G    S+  +     Y   AVK FQ  +G+  +G
Sbjct: 24  ELGDQTLKPGMYHEDVKELQKVLDDKGYFGYSETTTYY-GEYTTDAVKKFQADNGITVNG 82

Query: 156 MVDSSTLEAMNV 167
           +    T EA+ +
Sbjct: 83  IAGEETFEALGI 94


>gi|254424824|ref|ZP_05038542.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196192313|gb|EDX87277.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 339

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +    L  G++  SV  L+ERL   G       +   +    +  V+ +Q    L  +
Sbjct: 192 GSMTSDTLAPGSTGSSVIALQERLNNFG---IPVFVDGTYGFETQQGVRTYQRLQRLPVT 248

Query: 155 GMVDSSTLEAMNVPVDLR 172
           G  D  TL +M   V  +
Sbjct: 249 GTADRRTLSSMGFSVSSK 266



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           L  R L  G+    V+ L+  L  +G           +       V  +Q    L  +G+
Sbjct: 55  LTRRALRRGDIGEDVRALQLYLSQNGLFPYQA--DGIYGQETVDGVVTYQRIRDLPATGI 112

Query: 157 VDSSTLEAMN 166
            D  TL  M+
Sbjct: 113 ADEETLRDMD 122


>gi|237654227|ref|YP_002890541.1| peptidoglycan-binding protein [Thauera sp. MZ1T]
 gi|237625474|gb|ACR02164.1| Peptidoglycan-binding domain 1 protein [Thauera sp. MZ1T]
          Length = 274

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 95  PELPIR------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           P +P +       +  G +   +  ++E     G    ++ +  AF    E+A++ FQ  
Sbjct: 193 PSIPRKDAEDRPTIRRGATGNPIFLVKEVQRKLGF--GAQQVDGAFGPLTEAAMRRFQRA 250

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           HGL P G+V   T +A++ 
Sbjct: 251 HGLVPDGIVGPRTWKALDT 269


>gi|145297086|ref|YP_001139907.1| hypothetical protein cgR_2982 [Corynebacterium glutamicum R]
 gi|140847006|dbj|BAF56005.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 396

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 13/81 (16%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-------------GLSVAFDAYVESAVKLF 145
            + L +G+ S  V  +R  L   G ++                     FD  +  ++K F
Sbjct: 2   SKVLRVGDRSPRVAEVRTTLARLGVIEGYSREMSAKTESQKFHEEETLFDEELSLSIKSF 61

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q   G+ PSG++D  TL A+ 
Sbjct: 62  QQARGVVPSGLIDDLTLRAIR 82



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 101 PLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               GN      V  ++  L   G       +   F      AV  +Q+ +G+   G+  
Sbjct: 94  AYQPGNQLVGDDVVEIQSHLQELGFYA--DRVDGHFGELTHKAVMNYQLNYGMQVDGICG 151

Query: 159 SSTLEAMNV 167
             T+ A++ 
Sbjct: 152 PDTIRALSR 160


>gi|228953081|ref|ZP_04115141.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|112380305|gb|ABI16957.1| SleB [Bacillus thuringiensis serovar kurstaki]
 gi|228806587|gb|EEM53146.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 259

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST----LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T    ++A         +    N        ++   L+    N+P          
Sbjct: 90  LAGAKTKQMLVKATKYDKSTANKGTTTNKGNSGGTAQENKPLQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|91201948|emb|CAJ75008.1| hypothetical protein kuste4246 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 314

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 64/206 (31%)

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             +  +N   D R+        ++K L     G   +L++    +L  + N +   +  +
Sbjct: 162 ELIMRINKKPDSRLNI----GEKLKIL----KGKTKILISKSEFTLTVLLNDRYVKQYRI 213

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
             G+ D+ TP     +   M NP                                     
Sbjct: 214 GTGKNDK-TPEGTFEVKNKMKNPT------------------------------------ 236

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVV 336
                   W SP    + +     + N + +  I F    +     +H T  P       
Sbjct: 237 --------WYSPYGGVYSY---GDEKNILGTRWIGFKEKENLAGFGIHGTTMPETIGT-- 283

Query: 337 RFETSGCVRVRN--IIDLDVWLLKDT 360
              + GC+R++N  + ++  ++  DT
Sbjct: 284 -ASSDGCIRMKNSDVEEVFDFVTTDT 308


>gi|261417931|ref|YP_003251613.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC61]
 gi|297529599|ref|YP_003670874.1| spore cortex-lytic enzyme [Geobacillus sp. C56-T3]
 gi|319767257|ref|YP_004132758.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC52]
 gi|261374388|gb|ACX77131.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC61]
 gi|297252851|gb|ADI26297.1| spore cortex-lytic enzyme [Geobacillus sp. C56-T3]
 gi|317112123|gb|ADU94615.1| spore cortex-lytic enzyme [Geobacillus sp. Y412MC52]
          Length = 267

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G    +  +   F      A++ FQ  +GL   G
Sbjct: 25  AFSPQVIQRGAVGDDVIELQARLQYLGFY--NGKIDGVFGWRTYWALRNFQYEYGLPVDG 82

Query: 156 MVDSSTLEAM 165
           +  S T   +
Sbjct: 83  LAGSETKRKL 92


>gi|295314810|gb|ADF97555.1| PlyM30 [uncultured phage]
          Length = 338

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 202 GDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 258

Query: 165 MNV 167
           +N 
Sbjct: 259 LNA 261


>gi|295314772|gb|ADF97536.1| PlyM11 [uncultured phage]
          Length = 356

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 220 GDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 276

Query: 165 MNV 167
           +N 
Sbjct: 277 LNA 279


>gi|295314756|gb|ADF97528.1| PlyM3 [uncultured phage]
          Length = 307

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 185 GDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 241

Query: 165 MNV 167
           +N 
Sbjct: 242 LNA 244


>gi|78045053|ref|YP_360576.1| putative spore cortex-lytic enzyme [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997168|gb|ABB16067.1| putative spore cortex-lytic enzyme [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 226

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            +G+    V  +  +L+  G       +   FD   + AV  FQ + GL   G+V   T+
Sbjct: 33  KVGSYGSKVLEIERKLVSLGYKVY--KVDKYFDVSTKKAVMAFQKKEGLKVDGIVGPVTM 90

Query: 163 EAMNV 167
           + +  
Sbjct: 91  KRLIA 95


>gi|239831945|ref|ZP_04680274.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824212|gb|EEQ95780.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 208

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFE 339
            + V  N      +    D G  N M +  +  +   ++  Y +H T +P          
Sbjct: 123 PDMVKRNPEHYGPYKDGVDGGPRNPMGARALYMHKDGKDTYYRVHGTNDPSSIGK---AV 179

Query: 340 TSGCVRV--RNIIDLDV 354
           ++GC+R+  ++IIDL  
Sbjct: 180 SAGCIRLLNQDIIDLYD 196


>gi|163736602|ref|ZP_02144021.1| ErfK/YbiS/YcfS/YnhG [Phaeobacter gallaeciensis BS107]
 gi|161390472|gb|EDQ14822.1| ErfK/YbiS/YcfS/YnhG [Phaeobacter gallaeciensis BS107]
          Length = 199

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 47/182 (25%)

Query: 179 NLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRIN 236
           +  +         +G+  +L +I + +L     +G         V   +  T   ++++ 
Sbjct: 52  SFQQQAWQDHFDELGVGCMLADISSRALHYWGGDGVTYRLFPSSVPMTEELTKRGYTKVV 111

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           R   NP W    S+ ++D                                       P+ 
Sbjct: 112 RKAKNPSWTPTASMRERD---------------------------------------PSL 132

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
             R D G  N + +  +         +H T +        R  +SGC+ + N  +  L  
Sbjct: 133 PLRMDGGPGNPLGTRAMYLSWP-AYLVHGTHDTRKIG---RQSSSGCIGLYNQHVEALYE 188

Query: 355 WL 356
            +
Sbjct: 189 MV 190


>gi|153839922|ref|ZP_01992589.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AQ3810]
 gi|149746554|gb|EDM57542.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AQ3810]
          Length = 539

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TLE +   V      L 
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLA 532


>gi|295314758|gb|ADF97529.1| PlyM4 [uncultured phage]
          Length = 329

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 183 GDTGDNVRALQTGLKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 239

Query: 165 MNV 167
           +N 
Sbjct: 240 LNA 242


>gi|28897189|ref|NP_796794.1| putative general secretion pathway protein A [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|260361614|ref|ZP_05774641.1| general secretion pathway protein A [Vibrio parahaemolyticus K5030]
 gi|260878094|ref|ZP_05890449.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AN-5034]
 gi|260895977|ref|ZP_05904473.1| general secretion pathway protein A [Vibrio parahaemolyticus
           Peru-466]
 gi|28805398|dbj|BAC58678.1| putative general secretion pathway protein A [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|308086710|gb|EFO36405.1| general secretion pathway protein A [Vibrio parahaemolyticus
           Peru-466]
 gi|308089713|gb|EFO39408.1| general secretion pathway protein A [Vibrio parahaemolyticus
           AN-5034]
 gi|308111838|gb|EFO49378.1| general secretion pathway protein A [Vibrio parahaemolyticus K5030]
          Length = 539

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TLE +   V      L 
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLA 532


>gi|295314764|gb|ADF97532.1| PlyM7 [uncultured phage]
          Length = 356

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++  +V+ L+  L  +G L     +   F    E+AVK FQ  +GL   G+  + +   
Sbjct: 220 GDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRANGLAVDGVFGTGSQAK 276

Query: 165 MNV 167
           ++ 
Sbjct: 277 LDA 279


>gi|295094743|emb|CBK83834.1| Putative peptidoglycan binding domain./Stage II sporulation
           protein. [Coprococcus sp. ART55/1]
          Length = 410

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +L+ +L  I        +  +   +      AV+ FQ    L  +
Sbjct: 326 PGYELTIGSSGDKVSQLQRQLARIALNYPAIGTVTVDGVYGQNTADAVRKFQQIFNLPVT 385

Query: 155 GMVDSSTLEAMNV 167
           G+ D  T   ++ 
Sbjct: 386 GVTDYKTWYKISQ 398


>gi|255527303|ref|ZP_05394182.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|296185714|ref|ZP_06854123.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|255508993|gb|EET85354.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
 gi|296049842|gb|EFG89267.1| spore cortex-lytic enzyme [Clostridium carboxidivorans P7]
          Length = 235

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V +++ +L        S  +   +     +AVK FQ ++GL   G+V  STL+A
Sbjct: 44  GSKGGVVSQIQSKLKAWYYYSGS--VDGVYGYGTFTAVKKFQAKNGLKVDGVVGDSTLQA 101

Query: 165 MNVPVDL 171
           + +    
Sbjct: 102 LGIYSAK 108


>gi|126730040|ref|ZP_01745852.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Sagittula
           stellata E-37]
 gi|126709420|gb|EBA08474.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Sagittula
           stellata E-37]
          Length = 182

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 41/183 (22%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL   L   +  + + +    +L+   A  L  ++     +R  V  G+  +        
Sbjct: 23  QLDPTLRPQRVGIRKDLAPGQILILPAAHFLYYIDQPGAAMRYGVGFGKAGQAI-SGEFY 81

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           +      P W    ++I++D                                 +   +  
Sbjct: 82  VGSKKEWPTWRPTDAMIERD------------------------------PGSYGKFKGN 111

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNT---YMHDTPEPILFNNVVRFETSGCVRV--RNI 349
           ++   Q  G  N + +  +  Y         +H T  P       R  ++GCVR+   ++
Sbjct: 112 DY--VQPGGPGNPLGARALYLYRDGRYTYNAIHGTTSPESIG---RSVSNGCVRMINEHV 166

Query: 350 IDL 352
           +DL
Sbjct: 167 MDL 169


>gi|328471958|gb|EGF42835.1| general secretion pathway protein A [Vibrio parahaemolyticus 10329]
          Length = 539

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 451 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 508

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TLE +   V      L 
Sbjct: 509 DGIAGHRTLERLQQSVQPNAPTLA 532


>gi|323703741|ref|ZP_08115381.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531329|gb|EGB21228.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 292

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 43/175 (24%), Gaps = 56/175 (32%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
             + +++N     L   +NG +     V  GR    TP    ++     N          
Sbjct: 22  NSKMIIINKKTNQLGFYQNGVLTNVFPVATGRRRSFTPEGTFKVINKQVN---------- 71

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                      P Y K +                                    N +   
Sbjct: 72  -----------PPYYKKH-----------------------------IPGGSPYNPLGPR 91

Query: 312 KIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            +   +      +H    P        + ++GC+R+ N   L  WL    P  + 
Sbjct: 92  WLGLSAPGGPYGIHGNNNPASIGT---YASNGCIRLHNKDIL--WLYDQVPIGTP 141


>gi|322805741|emb|CBZ03306.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum H04402
           065]
          Length = 281

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 34/99 (34%), Gaps = 3/99 (3%)

Query: 68  PIISKETIAQTEKAI-AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           P  SK      +  +       +SR G+   P      G      + +++ LI  G    
Sbjct: 180 PSTSKPVQTNKKHTLINQLYAEMSRQGFNTFPAC--RQGARGNITKIIQQMLINIGYTVG 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S G    F      AVK FQ    L    +V   T +A+
Sbjct: 238 SFGADGVFGNSTVMAVKSFQRDCNLSADVLVGKETWKAL 276


>gi|302553257|ref|ZP_07305599.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470875|gb|EFL33968.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 259

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 91  RGGWPELPIRPLHL----GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            G W     R L      GN+   V   +  L  +G       +   F  + E AV+  Q
Sbjct: 181 DGRWYAGNSRTLKAVLATGNAGPEVAEAQCLLREAGL--SPGAVDGIFGPHTEQAVRELQ 238

Query: 147 MRHGLDPSGMVDSSTLEAMN 166
            R GL   G++   T +A+ 
Sbjct: 239 KRSGLVVDGIIGPHTWKALR 258


>gi|326804586|ref|YP_004327457.1| phage-encoded peptidoglycan binding protein [Salmonella phage Vi01]
 gi|301795236|emb|CBW37954.1| phage-encoded peptidoglycan binding protein [Salmonella phage Vi01]
          Length = 264

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN    V+ L++ L   G    S      F    E+AVK  Q   GL   G+    T
Sbjct: 4   LKLGNRGSEVKSLQQSLNKIGF---SLVADGIFGKATENAVKSVQAGAGLVIDGIAGPKT 60

Query: 162 LEAMN 166
             A+ 
Sbjct: 61  FYAIR 65


>gi|323137227|ref|ZP_08072306.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322397585|gb|EFY00108.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 259

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 44/187 (23%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           + A         R++  + +R +   +       ++V+ P   L  V+     +R  + V
Sbjct: 98  VAAYAPQPMDMQREMDPDYLRAEVDYQGPESPGTIVVDTPRKHLYLVQGRGRAIRYGIGV 157

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           GR   +       I+R    P W  P  ++ +                            
Sbjct: 158 GRPGFE-WSGVKTISRKAEWPDWTPPAEMLARR--------------------------- 189

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                       P+     D G  N + +  +   S     +H T EP          +S
Sbjct: 190 ------------PDLPRHMDGGPANPLGARALYLGSS-LYRIHGTNEPHTIGQN---VSS 233

Query: 342 GCVRVRN 348
           GC+R+ N
Sbjct: 234 GCIRMMN 240


>gi|260429377|ref|ZP_05783354.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Citreicella
           sp. SE45]
 gi|260420000|gb|EEX13253.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Citreicella
           sp. SE45]
          Length = 188

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPI 330
                + +  +   +      ++   Q  G  N + +  +  F +  +T+  +H T EP 
Sbjct: 97  WRPTQEMIERDPSSYGRFRNNDY--VQPGGPTNPLGARALYLFQNGRDTFYRIHGTTEPQ 154

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                 R  ++GC+R+   ++IDL   +   TP
Sbjct: 155 SIG---RSVSNGCIRMLNEHVIDLYNRVPVGTP 184


>gi|320011044|gb|ADW05894.1| Peptidoglycan-binding domain 1 protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 329

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS- 154
           E+    L  G+S   V  L+ RL            +  + A VE AV  +Q    +    
Sbjct: 249 EVSGATLRRGDSGAEVAELQRRLQEI--WVYRGPDNGDYSAQVEQAVAEYQRWVSVRNDP 306

Query: 155 -GMVDSSTLEAMNVPVDLR 172
            G+    T  A+      R
Sbjct: 307 PGVYGPETRSALESQTSGR 325


>gi|134297972|ref|YP_001111468.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
 gi|134050672|gb|ABO48643.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
          Length = 192

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 6/63 (9%)

Query: 304 KINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
               + +  +          +H T  P          ++GC+R+   N+ +L   +   T
Sbjct: 59  PGGILGTRWLGLNIPGGNYGIHGTSNPSSIGK---LVSAGCIRMYNENVEELFPMIPVGT 115

Query: 361 PTW 363
           P  
Sbjct: 116 PVE 118


>gi|21223194|ref|NP_628973.1| serine/threonine protein kinase [Streptomyces coelicolor A3(2)]
 gi|9367447|emb|CAB97420.1| putative serine/threonine protein kinase [Streptomyces coelicolor
           A3(2)]
          Length = 452

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G W       +  G+    V+ L+  L     +     +   F    + AV  FQ R G
Sbjct: 376 SGTWDF----TIARGDGGSQVRELQCLLRYLHGITAVGEVDGDFGPMTQGAVVTFQERAG 431

Query: 151 LDPSGMVDSSTLEAMN 166
           LD  G+V  +T  A+ 
Sbjct: 432 LDADGIVGPATWRALR 447


>gi|16265094|ref|NP_437886.1| hypothetical protein SM_b21516 [Sinorhizobium meliloti 1021]
 gi|15141233|emb|CAC49746.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 243

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  R++     R +           V+V+ P   L  +E G   +R  V +GR     
Sbjct: 69  PAVPYREMDPKYFRQRVPDPTGEPAGTVVVDTPGRFLYLIEPGGTAMRYGVGIGREGFA- 127

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I+     P W  P  +I +     L +           + +             
Sbjct: 128 WQGEGIIHWRQPWPRWKPPADMIARR--PELEK---------YSVANGG----------- 165

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  F +  +    +H TPE           +SGCVR
Sbjct: 166 -----------MAPGIDNPLGARALYIFQNGQDTLYRLHGTPEWKSIGK---AVSSGCVR 211

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +    P
Sbjct: 212 LVNQDVIDLYKRVPYHAP 229


>gi|317124408|ref|YP_004098520.1| peptidoglycan-binding protein [Intrasporangium calvum DSM 43043]
 gi|315588496|gb|ADU47793.1| Peptidoglycan-binding domain 1 protein [Intrasporangium calvum DSM
           43043]
          Length = 679

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 30/148 (20%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA------- 83
           +        +     ++     D     +             + +A  ++++A       
Sbjct: 548 LAMGSRGAAVRTLQRALGGVAVDGVFGSLTR-----------DKVAALQRSLALPQTGVV 596

Query: 84  --FYQDILSRGGWPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
                ++L    +P    R   L LG++   V  ++  L +          +  FD    
Sbjct: 597 TPEVWEVLESREFPFAAHRTTVLRLGDTGPQVSAVQRVLGV--------RPTGVFDERTR 648

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +AVK  Q R GL  +G+V S T    + 
Sbjct: 649 AAVKEAQARAGLASTGVVASRTWSLFDR 676



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 48/136 (35%), Gaps = 17/136 (12%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPII---SKETIAQTEKAIAFYQD 87
           +   +  E + +    + N     +   +     ++        +  +A         Q+
Sbjct: 220 LSFGMQSEAVRQLQVRLGNLPTTGYYGAMTRDRVTEYQRFAGLPQTGVADLRT-----QE 274

Query: 88  ILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           IL++ GW  +      L  G +S +V+ L+ +L        S   +  F +  +  V  +
Sbjct: 275 ILAKRGWRTVSAAFPTLSYGMTSSAVRTLQTKL-------GSLPTTGYFGSLTKDRVLAY 327

Query: 146 QMRHGLDPSGMVDSST 161
           Q   GL  +G  D  T
Sbjct: 328 QKFVGLPQTGTADPVT 343



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 10/132 (7%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +        +      + N     +   +     ++        +  T  A    Q++L
Sbjct: 368 TLSIGTTSAAVKNLQAELGNLPTTGYFGSMTQARVTEY--QKAVGLPATGIADQTTQELL 425

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
              GWP      L +G +S +VQ L+ RL        +   +  F +   + V  +Q   
Sbjct: 426 YTKGWPT-TYPTLSVGMTSTAVQNLQARL-------GNLPTTGYFGSMTRARVIEYQRFV 477

Query: 150 GLDPSGMVDSST 161
           GL  +G+ D+ T
Sbjct: 478 GLATTGVADNRT 489



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 7/73 (9%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            + GG        L +G +S +V+ L+      G+L  +      F +  ++ V  +Q  
Sbjct: 356 ATSGGGTATTYPTLSIGTTSAAVKNLQ---AELGNLPTTG----YFGSMTQARVTEYQKA 408

Query: 149 HGLDPSGMVDSST 161
            GL  +G+ D +T
Sbjct: 409 VGLPATGIADQTT 421


>gi|291485863|dbj|BAI86938.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 313

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP               V+R+++ L            + G+   +     +AVK FQ  
Sbjct: 232 ALPSGTFKVTNPMRKGDDVRRIQKALAALYFYPDKGAKNNGIDGVYGPKTANAVKRFQSM 291

Query: 149 HGLDPSGMVDSSTLEAMN 166
           +GL   G+  S T   + 
Sbjct: 292 YGLTQDGIYGSKTKAKLE 309


>gi|56420766|ref|YP_148084.1| sporulation specific N-acetylmuramoyl-L-alanine amidase
           [Geobacillus kaustophilus HTA426]
 gi|56380608|dbj|BAD76516.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Geobacillus kaustophilus HTA426]
          Length = 264

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G    +  +   F      A++ FQ  +GL   G
Sbjct: 25  AFSPQVIQRGAVGDDVIELQARLQYLGFY--NGKIDGVFGWRTYWALRNFQYEYGLPVDG 82

Query: 156 MVDSSTLEAM 165
           +  S T   +
Sbjct: 83  LAGSETKRKL 92


>gi|20808962|ref|NP_624133.1| periplasmic protease [Thermoanaerobacter tengcongensis MB4]
 gi|20517627|gb|AAM25737.1| Periplasmic protease [Thermoanaerobacter tengcongensis MB4]
          Length = 453

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 22/128 (17%)

Query: 79  EKAIAFY-----QDILSRGGWPEL------------PIRPLHLGNSSVSVQRLRERLIIS 121
           +  IA Y     + I   G  P++                L +G+    V+ L++ L + 
Sbjct: 328 KLTIARYKLPSGRYIGKEGLTPDVYVKNVQYTADIKFGGELKIGSRGNEVKILQKYLNLL 387

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV---PVDLRIRQLQV 178
                +      F     +AVK  Q + GL P+G+ D +T  A+      ++ +   L+ 
Sbjct: 388 KF--NAGPEDGIFGPKTANAVKELQKKAGLSPTGVFDKNTYNALLKMIDSLNNKDAVLEK 445

Query: 179 NLMRIKKL 186
            L  ++ +
Sbjct: 446 ALELLRNM 453


>gi|323339888|ref|ZP_08080157.1| carboxy-terminal processing protease CtpA [Lactobacillus ruminis
           ATCC 25644]
 gi|323092761|gb|EFZ35364.1| carboxy-terminal processing protease CtpA [Lactobacillus ruminis
           ATCC 25644]
          Length = 481

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L L +S  SV+ L++ L   G    +   +  F    + AV+ +Q  + L  +G  D+
Sbjct: 395 KELKLDDSGSSVESLQKMLNFLGY--DAGKENGYFSEKTQKAVEAYQKENKLTVNGKADT 452

Query: 160 STLEAMNVPVDLRIRQ 175
            TL  +   +  +I Q
Sbjct: 453 KTLTTLETQISQKINQ 468


>gi|209548546|ref|YP_002280463.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534302|gb|ACI54237.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 204

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 43/182 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       V+V+ PA     V      +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYETTHAAGTVVVDTPARRAYYVLGDGRAVRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ I R    P W    ++ +++                                   
Sbjct: 101 AGNAYIGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y         +H T +P          +SGC+R+
Sbjct: 126 -ERYRKLAGGMPGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCIRM 181

Query: 347 RN 348
            N
Sbjct: 182 MN 183


>gi|119943964|ref|YP_941644.1| general secretion pathway ATPase protein [Psychromonas ingrahamii
           37]
 gi|119862568|gb|ABM02045.1| General secretion pathway ATPase protein [Psychromonas ingrahamii
           37]
          Length = 584

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           LS   +      L ++   S   +  D  ++  A +    DS   +I  + I  +E    
Sbjct: 427 LSCYSENTSLKKLKQLNYPSVVRLERDNLESLHAVLYAINDSYQLLIDGQVIEVSETWFN 486

Query: 84  FYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
            Y        W  P      L  G  S  +  L  +L     +         FD  +   
Sbjct: 487 TYWSGELTVLWQAPFELQGNLKFGQQSEQIAWLARQLNKLQGMPIESK--NRFDLPLLQQ 544

Query: 142 VKLFQMRHGLDPSGMVDSSTL 162
           V  FQ+ +GL   G+V   TL
Sbjct: 545 VMRFQIENGLKDDGIVGERTL 565


>gi|327190701|gb|EGE57783.1| hypothetical protein RHECNPAF_397007 [Rhizobium etli CNPAF512]
          Length = 268

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 75  QFNQTYGLPVTNPVHATMYGELRDEDFTLPAIPVSRVQPQYLRQEVDYQTAERPGTVVVD 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W  P  ++ +      
Sbjct: 135 TKARFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTPPAEMVSRQ----- 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
                                   +   +++          +PG  N + +  +      
Sbjct: 189 -----------------------PDVRAFSAENGGM-----NPGLQNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 221 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPARAE 264


>gi|153871860|ref|ZP_02000922.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
 gi|152071675|gb|EDN69079.1| Peptidoglycan-binding domain 1 [Beggiatoa sp. PS]
          Length = 134

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P LP   + +G ++ +V  +R+ L  I G       LS  FD  ++  +  FQ +  L  
Sbjct: 51  PVLPPPVIKVGMTNDTVLWIRKHLDTIEGIRSELLTLSPRFDYPLKRRIIEFQRQQKLHA 110

Query: 154 SGMVDSSTLEAMNV 167
            G+V   T+ A+  
Sbjct: 111 DGVVGEQTMLALQA 124


>gi|56963635|ref|YP_175366.1| spore cortex-lytic enzyme [Bacillus clausii KSM-K16]
 gi|56909878|dbj|BAD64405.1| spore cortex-lytic enzyme [Bacillus clausii KSM-K16]
          Length = 296

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 5/160 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G +   V  L+ RL   G    +  +   F      AV+ +Q  +GL+  G
Sbjct: 30  AFSDQVIQKGATGDDVVELQSRLQYVGYY--NGKIDGVFGWGTYWAVRHYQYEYGLEIDG 87

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           +V       +    D     +   L   +K      G    +   P  S +  +  K   
Sbjct: 88  LVGDDMKAKLASTTDYDKAFVTKALNEGRKF-SHYGGTPKDIQKGPKGSADKQKQKKEAA 146

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           +          Q    + +   I       +P      D+
Sbjct: 147 KGGEAQQPAPNQPETGNEQEPII--EKANNVPSGYSSNDI 184


>gi|302390876|ref|YP_003826696.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
 gi|302202953|gb|ADL11631.1| ErfK/YbiS/YcfS/YnhG family protein [Acetohalobium arabaticum DSM
           5501]
          Length = 171

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 19/92 (20%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
               A+ S  I+F  +    +H T +P L        ++GCVR+ N  + D+   +   T
Sbjct: 53  NPGGALGSRWIQFTWQ-THGIHGTNQPWLIGQ---AVSNGCVRMYNTDVKDIYKQVEVGT 108

Query: 361 PTWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
           P     HI   + +            P + +Y
Sbjct: 109 PI----HIYNNLNS---------NPNPDYTIY 127


>gi|187778003|ref|ZP_02994476.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
           15579]
 gi|187774931|gb|EDU38733.1| hypothetical protein CLOSPO_01595 [Clostridium sporogenes ATCC
           15579]
          Length = 125

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  +  +          +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGARWLGLNIPYGDYGIHGTNTPSSIGKS---VSNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +++N  A +L    N  V     V VG+    TP    +I     NP  
Sbjct: 16  YRIVINTKAHTLTLFRNNNVYKTYKVAVGKPSTPTPKGTFKIINRAINPGG 66


>gi|89099115|ref|ZP_01171994.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. NRRL B-14911]
 gi|89086245|gb|EAR65367.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Bacillus sp. NRRL B-14911]
          Length = 285

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G    +  +   F      A++ FQ   GL   G
Sbjct: 32  AFSAQVIQHGAVGDDVIELQSRLQYLGFY--NGKIDGVFGWGTYWALRNFQYEFGLPIDG 89

Query: 156 MVDSSTLEAMNV 167
           +    T   +  
Sbjct: 90  LAGQETKAKLAK 101


>gi|168186698|ref|ZP_02621333.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum C str. Eklund]
 gi|169295310|gb|EDS77443.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum C str. Eklund]
          Length = 309

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 49/154 (31%), Gaps = 19/154 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL LG     V+ L+  L   G           F +  E A+  FQ R+ L+   +   S
Sbjct: 85  PLRLGCKGNDVKALQNNLNKFGY---KINADGIFGSSTEIALYDFQRRNNLNRDCIAGES 141

Query: 161 TLEAMNV--------PVDLRIRQLQVNLMRIKKLLEQKMG----LRYVLVNIPAASLEAV 208
           TL+ + +             I    +N    +  + ++        Y+ VN         
Sbjct: 142 TLKRLALEPTEKTMYDPKDNIFSPVINSNSSESFINKRNANSQTDYYIWVNTNTPKTYIF 201

Query: 209 ENG----KVGLRSTVIVGRVDRQTPILHSRINRI 238
           +      K+    +  VG+    T     ++   
Sbjct: 202 KGYNHHWKLIKSMSCTVGKSSSPTIKGTFKVGNK 235


>gi|159184495|ref|NP_353867.2| hypothetical protein Atu0845 [Agrobacterium tumefaciens str. C58]
 gi|159139804|gb|AAK86652.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 257

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 42/195 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +++     R + +         V+V+  +  L  VE G   +R  V +GR D   
Sbjct: 92  PAVPYQKIDRRYYRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAMRYGVGIGR-DGFA 150

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 151 WSGEGVIQWRQKWPKWTPPDEMVARQ----------------------------PELVKY 182

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYS-RNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +S           PG  N + +  +  F + ++  Y +H +PE           +SGCVR
Sbjct: 183 SSKNGGM-----PPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGK---AVSSGCVR 234

Query: 346 V--RNIIDLDVWLLK 358
           +  +++IDL   + +
Sbjct: 235 LMNQDVIDLYDRVPQ 249


>gi|254230373|ref|ZP_04923757.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|262392387|ref|YP_003284241.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|151937111|gb|EDN55985.1| general secretion pathway protein A [Vibrio sp. Ex25]
 gi|262335981|gb|ACY49776.1| general secretion pathway protein A [Vibrio sp. Ex25]
          Length = 538

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L   L  +  +      +  FD  ++  V+LFQ   G+  
Sbjct: 450 WQAPLKETLRLDMEGPAIEVLDRLLAEA--VSEPLLETSIFDGAMKERVELFQRWQGIGV 507

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL+ +   V     QL 
Sbjct: 508 DGIAGKRTLDRLQQNVQPDAPQLA 531


>gi|182678754|ref|YP_001832900.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634637|gb|ACB95411.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 199

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 44/172 (25%), Gaps = 44/172 (25%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            V   R       +     ++V+     L  V      +R  + VGR   +       + 
Sbjct: 52  AVAPARETVSYSTRYAPGTIVVSTDERRLYYVLPNNQAIRYGIGVGRPGFE-WHGVKTVA 110

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
                P W  P  ++++                                        P+ 
Sbjct: 111 MKREWPSWTPPAQMLRRR---------------------------------------PDL 131

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                 G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 132 PRFMPGGPDNPLGARALYIG-GTLYRIHGSNEPETIGQ---AVSSGCIRMTN 179


>gi|319651171|ref|ZP_08005303.1| hypothetical protein HMPREF1013_01915 [Bacillus sp. 2_A_57_CT2]
 gi|317397153|gb|EFV77859.1| hypothetical protein HMPREF1013_01915 [Bacillus sp. 2_A_57_CT2]
          Length = 498

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L L  SS  V+  ++ L   G           FD   E AVK FQ    L+ +G++
Sbjct: 405 PDTELKLSVSSAQVKAGQQMLKALGY--DPGREDGFFDEKTEQAVKEFQAAEKLEQNGVL 462

Query: 158 -DSSTLEAMNV 167
              STL  M  
Sbjct: 463 SGQSTLRLMEK 473


>gi|307946023|ref|ZP_07661358.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
 gi|307769687|gb|EFO28913.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
          Length = 235

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 301 DPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            PG  N + +  ++ +    +  Y +H T  P          +SGC+R+  +++IDL   
Sbjct: 162 PPGLKNPLGARAMDLWQGSVDTLYRIHGTNSPNSIGKS---VSSGCIRMWQQDVIDLFER 218

Query: 356 LLKDTP 361
           +   T 
Sbjct: 219 VPLRTK 224


>gi|296332967|ref|ZP_06875424.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674929|ref|YP_003866601.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149818|gb|EFG90710.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413173|gb|ADM38292.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 303

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 11/166 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 29  AFSNQVIQRGATGDDVVELQARLQYNGYY--NGKIDGVYGWGTYWAVRNFQDQFGLKEVD 86

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGK- 212
           G+V + T + +          +   L +        K+ L+Y      AA+ +A +  + 
Sbjct: 87  GLVGAKTKQTLISKSKYYREYVMEQLNKGNTFTHYGKIPLKYQTKPSKAATQKARQQAEA 146

Query: 213 ------VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
                           +    TP      + +  N       + I+
Sbjct: 147 RQKQPAEKTTQQPKANKQQNNTPAKAREQDAVAANMPGGFSNNDIR 192


>gi|325292223|ref|YP_004278087.1| hypothetical protein AGROH133_04590 [Agrobacterium sp. H13-3]
 gi|325060076|gb|ADY63767.1| hypothetical protein AGROH133_04590 [Agrobacterium sp. H13-3]
          Length = 241

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 42/195 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +++     R + +         V+V+  +  L  VE G   +R  V +GR D   
Sbjct: 76  PAVPYQKIDRRYYRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAMRYGVGIGR-DGFA 134

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 135 WSGEGVIQWRQKWPKWTPPDEMVARQ----------------------------PELVKY 166

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYS-RNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +S           PG  N + +  +  F + ++  Y +H +PE           +SGCVR
Sbjct: 167 SSKNGGM-----PPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGK---AVSSGCVR 218

Query: 346 V--RNIIDLDVWLLK 358
           +  +++IDL   + +
Sbjct: 219 LMNQDVIDLYDRVPQ 233


>gi|190890871|ref|YP_001977413.1| hypothetical protein RHECIAT_CH0001254 [Rhizobium etli CIAT 652]
 gi|218516834|ref|ZP_03513674.1| hypothetical protein Retl8_26139 [Rhizobium etli 8C-3]
 gi|190696150|gb|ACE90235.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 268

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 75  QFNQTYGLPVTNPVHATMYGELRDEDFTLPAIPVSRVQPQYLRQEVDYQTAERPGTVVVD 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W  P  ++ +      
Sbjct: 135 TKARFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTPPAEMVSRQ----- 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
                                   +   +++          +PG  N + +  +      
Sbjct: 189 -----------------------PDVRAFSAENGGM-----NPGLQNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 221 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPARAE 264


>gi|159186531|ref|NP_396125.2| hypothetical protein Atu5196 [Agrobacterium tumefaciens str. C58]
 gi|159141591|gb|AAK90566.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 238

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 67/198 (33%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++    +R +           V+V+ P   L  VENG   LR  V +GR D  +
Sbjct: 68  PAVPFERMNPEYLRQRVADPTGEAPGTVVVDTPRRFLYLVENGGTALRYGVGIGR-DGFS 126

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
              +  I+     P W  P  +I +     L +           + +             
Sbjct: 127 WEGNGYIHWRQHWPRWKPPSEMIARQ--PELEK---------YSVANGG----------- 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       DPG  N + +  +  F +  +  Y +H  PE           +SGCVR
Sbjct: 165 -----------MDPGLHNPLGARALYIFQNGEDTLYRLHGNPEWQSIGK---AVSSGCVR 210

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++I+DL   +    P
Sbjct: 211 LMNQDIVDLYDRVPFHAP 228


>gi|294498491|ref|YP_003562191.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
 gi|294348428|gb|ADE68757.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium QM B1551]
          Length = 111

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                +         +H T +P      +   + GCVR+ N  I++L   +   TP +
Sbjct: 55  FGPLWMGLSKP-TYGIHGTNDPASIGRDM---SHGCVRMDNEDILELSSAVPIGTPVY 108


>gi|291448714|ref|ZP_06588104.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291351661|gb|EFE78565.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 503

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 83  AFYQDILSRG-----GWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
              + + + G      W  L        L  G S  +V+RL+  L  +  L  + G+  +
Sbjct: 410 QRDRSLDADGMVGPKTWTALLSAGTTPLLKQGGSGDAVKRLQRALTAA--LGKTVGVDGS 467

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           F    ++AV+ +Q    L   G V  +T +A+ 
Sbjct: 468 FGPATDTAVRNYQDTRKLGVDGQVGPATWKALQ 500



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 371 GSSGPQVTAVQTLLTQQKY--SPGKVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 428

Query: 165 M 165
           +
Sbjct: 429 L 429


>gi|239945248|ref|ZP_04697185.1| putative amidase [Streptomyces roseosporus NRRL 15998]
          Length = 518

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 83  AFYQDILSRG-----GWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
              + + + G      W  L        L  G S  +V+RL+  L  +  L  + G+  +
Sbjct: 425 QRDRSLDADGMVGPKTWTALLSAGTTPLLKQGGSGDAVKRLQRALTAA--LGKTVGVDGS 482

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           F    ++AV+ +Q    L   G V  +T +A+ 
Sbjct: 483 FGPATDTAVRNYQDTRKLGVDGQVGPATWKALQ 515



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 386 GSSGPQVTAVQTLLTQQKY--SPGKVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 443

Query: 165 M 165
           +
Sbjct: 444 L 444


>gi|182678539|ref|YP_001832685.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634422|gb|ACB95196.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 197

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 45/174 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           ++      + G   ++V+     L  V          V VGR    +      + R    
Sbjct: 55  QLVIWNHPEYGKGTIVVSTKERRLYYVLGEDRAYEYGVGVGREG-FSWAGTKTVTRKREW 113

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 114 PDWHPPAQMLKRR---------------------------------------PDLPKYMP 134

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            G  N + +  +   S N   +H + EP          +SGC+R+ N  D+   
Sbjct: 135 GGMDNPLGARALYLGSSN-YRIHGSNEPDTIGA---AVSSGCIRMTN-RDIVDL 183


>gi|167749731|ref|ZP_02421858.1| hypothetical protein EUBSIR_00698 [Eubacterium siraeum DSM 15702]
 gi|167751426|ref|ZP_02423553.1| hypothetical protein EUBSIR_02422 [Eubacterium siraeum DSM 15702]
 gi|167655672|gb|EDR99801.1| hypothetical protein EUBSIR_02422 [Eubacterium siraeum DSM 15702]
 gi|167657354|gb|EDS01484.1| hypothetical protein EUBSIR_00698 [Eubacterium siraeum DSM 15702]
 gi|291531931|emb|CBK97516.1| Cell Wall Hydrolase./Putative peptidoglycan binding domain
           [Eubacterium siraeum 70/3]
          Length = 231

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 11/141 (7%)

Query: 61  MGIDSDIPII---SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
             I    P     S   I      I  +      G    +       G+    V+ +++ 
Sbjct: 2   EYIRQLNPFYKMMSVTVIIFLISGI--FSAFAENGNNESVTAYSQK-GSQGSEVEAVQQT 58

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD--LRIRQ 175
           L   G    +  ++  F    E A+  FQ + GL  +G+ D++TL+ + + +        
Sbjct: 59  LKDRGLF--NAEVTGYFGEKTEEAILRFQKQQGLAQTGVADNATLKRLGISIGSIPPATT 116

Query: 176 LQVNLMRIKKLLEQKMGLRYV 196
             +NL+  + +  +  G  Y+
Sbjct: 117 ANINLL-ARIISAEGRGEPYI 136


>gi|17232476|ref|NP_489024.1| hypothetical protein alr4984 [Nostoc sp. PCC 7120]
 gi|17134122|dbj|BAB76683.1| alr4984 [Nostoc sp. PCC 7120]
          Length = 203

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  GNS ++V+ L+  L+  G       +   F A  E+AVK FQ++  L   G+V  +
Sbjct: 140 TLRFGNSGLAVRALQRLLVAKGYAIR---VDGNFGALTETAVKAFQIQRNLSVDGVVGFN 196

Query: 161 TLEAMNV 167
           T  ++  
Sbjct: 197 TWYSLTR 203


>gi|312876696|ref|ZP_07736676.1| carboxyl-terminal protease [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796536|gb|EFR12885.1| carboxyl-terminal protease [Caldicellulosiruptor lactoaceticus 6A]
          Length = 472

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +AVK FQ  + L PSG++
Sbjct: 380 ATKKFKKGDMDLEVLAAQQRLFYLGYLSSWTA---KMDDSTVAAVKKFQKDNRLYPSGVL 436

Query: 158 DSSTLEAMNVPVDL 171
           D +T + +N     
Sbjct: 437 DITTQKKLNEKFSE 450


>gi|239991710|ref|ZP_04712374.1| putative amidase [Streptomyces roseosporus NRRL 11379]
          Length = 517

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 83  AFYQDILSRG-----GWPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
              + + + G      W  L        L  G S  +V+RL+  L  +  L  + G+  +
Sbjct: 424 QRDRSLDADGMVGPKTWTALLSAGTTPLLKQGGSGDAVKRLQRALTAA--LGKTVGVDGS 481

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           F    ++AV+ +Q    L   G V  +T +A+ 
Sbjct: 482 FGPATDTAVRNYQDTRKLGVDGQVGPATWKALQ 514



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  ++  L           +   F +  +SAV+ FQ    LD  GMV   T  A
Sbjct: 385 GSSGPQVTAVQTLLTQQKY--SPGKVDGLFGSDTKSAVEKFQRDRSLDADGMVGPKTWTA 442

Query: 165 M 165
           +
Sbjct: 443 L 443


>gi|209883487|ref|YP_002287344.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209871683|gb|ACI91479.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 174

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 44/156 (28%), Gaps = 47/156 (30%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L  + + +  +R  V VG+  ++     +RI+    NP W  P  + +         
Sbjct: 50  ERRLYLILDEQHAIRYPVGVGKRGKE-WSGTTRISGKYRNPAWAPPADVKR--------- 99

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNN 320
                                         + P+     + G   N M    +       
Sbjct: 100 ------------------------------DHPHLPDVIEGGSPRNPMGVAAMTLAGGE- 128

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV 354
             +H T  P        F + GCVR+ N    DL  
Sbjct: 129 YAIHGTNVPKSVG---GFVSYGCVRMYNPDITDLFE 161


>gi|23100367|ref|NP_693834.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
           HTE831]
 gi|22778600|dbj|BAC14868.1| N-acetylmuramoyl-L-alanine amidase [Oceanobacillus iheyensis
           HTE831]
          Length = 938

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E+ +A  +++               LG+   ++  ++E+L   G        +  F  + 
Sbjct: 260 ERTLAKLEELA--------STDVFELGDRHNAIIIIKEKLNAIGF--GGISETNYFGGWT 309

Query: 139 ESAVKLFQMRHGLDPSGMVDSST 161
           E+ VK FQ  +GL   G V  +T
Sbjct: 310 ETRVKQFQQYYGLSVDGKVGPAT 332



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+   P   G        L+E+L   G       +S  +  Y +S VK FQ   GL  +G
Sbjct: 477 EVYNSPFQAGKRHEDTIELKEKLNRLGY--GHITVSTLYGNYTKSQVKEFQRDFGLVVNG 534

Query: 156 MVDSSTL 162
           + D +T 
Sbjct: 535 IADENTW 541



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 17/200 (8%)

Query: 87  DILSRGGWPELPIRPLH----LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I     W +L          LG+    +  ++++L   G        +  F  + E+ V
Sbjct: 534 GIADENTWIKLNEVYYKTGFQLGDRHEDIIEIKKQLNAIGF--GGITETNYFGKWTETRV 591

Query: 143 KLFQMRHGLDPSGMVDSST---LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           + FQ  +GL  +G  D  T   L  +        ++    +   +KL     G   V   
Sbjct: 592 EQFQRYYGLSVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNRIGFGYITVSTL 651

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             + +   V+  +      V  G  D  T  + + I            R I  K+M+   
Sbjct: 652 YGSFTESQVKKFQEYYGLKV-NGIADEVTMDMINEIYNSPLQKGKSDSRVIEMKEML--- 707

Query: 260 RQDPQYLKDNNIHMIDEKGK 279
                 L  + I + D  G 
Sbjct: 708 ----NALGYDGITISDYFGN 723



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 18/147 (12%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT-------E 79
              P       E + E    + +  FD        G  ++  +   +T  Q        +
Sbjct: 132 ASIPYEKGDRHEDLVEIKEKLNHIGFDGITETDYFGNWTETRVTQFQTYYQLSVTGKVDQ 191

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           K I              +   P   G      + ++E+L   G       ++  F  Y+E
Sbjct: 192 KTINKLD---------SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYME 240

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S VK FQ   GL  +G+ D  TL  + 
Sbjct: 241 SQVKEFQRDQGLRVNGIADERTLAKLE 267



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 10/80 (12%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A  +++               LG+   ++  ++++L   G        +  F  + E+ 
Sbjct: 402 LAKLEELA--------STDVFELGDRHSAIITIKQKLNAIGF--DRISETDYFGGWTETR 451

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           V+ FQ  + L+ +G  D +T
Sbjct: 452 VRQFQEYYNLNVTGKADEAT 471



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 10/92 (10%)

Query: 83  AFYQDILSRGG--------WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             Y  +   G           ++   P   G        L+E+L   G       +S  +
Sbjct: 595 QRYYGLSVTGTADEQTQQKLSDVYNSPYQNGKRHDGTIELKEKLNRIGF--GYITVSTLY 652

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            ++ ES VK FQ  +GL  +G+ D  T++ +N
Sbjct: 653 GSFTESQVKKFQEYYGLKVNGIADEVTMDMIN 684



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +   P   G      + ++E+L   G       ++  F  Y+ES VK FQ   GL  +G
Sbjct: 338 SVYNSPFQNGKRHEDTKAIKEKLNSIGY--GPITVTTLFGNYMESQVKEFQRDQGLRENG 395

Query: 156 MVDSSTLEAMN 166
           + D+ TL  + 
Sbjct: 396 IADAPTLAKLE 406


>gi|113477597|ref|YP_723658.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110168645|gb|ABG53185.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 414

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 50/166 (30%), Gaps = 4/166 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V+ L+ERL   G       L   F    E AV  F+  +    +     
Sbjct: 171 RVLVRGSEGSDVKILQERLKDLGYYLGE--LDAIFGRQTELAVIDFKKDYFGITTDNATV 228

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            ++    +  D   +   +     K  L      R          L+  ++GK+  R  V
Sbjct: 229 ESITWKKLWGDPLPKPPVLPPTSKKNYLLLTKTSRKDRYGCYVLHLDYFKSGKLEDRLEV 288

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
             G   RQ     +           +        D++    QD  Y
Sbjct: 289 CCGAPGRQ--FFRTAARSRAMTGEPLPEGKWYINDIIWADGQDNYY 332


>gi|182433829|ref|YP_001821548.1| hypothetical protein SGR_36t [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|182440894|ref|YP_001828613.1| hypothetical protein SGR_7103t [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178462345|dbj|BAG16865.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178469410|dbj|BAG23930.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 142

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++  LI  G       +   F     +AV  FQ   GLD  G+V ++T   
Sbjct: 80  GDTGDRVREIQCLLIFKGF--GVGAVDGDFGPATRTAVVAFQKNRGLDYDGIVGANTWRK 137

Query: 165 MNV 167
           + V
Sbjct: 138 LRV 140


>gi|117164603|emb|CAJ88149.1| putative muramoyl-pentapeptide carboxypeptidase [Streptomyces
           ambofaciens ATCC 23877]
          Length = 244

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+S   V +L+ R+               + A   +AVK FQ  +GL   G+  S
Sbjct: 40  RTLSEGSSGSDVTQLQIRVAGWVTSGERLSYDGQYGARTAAAVKKFQAAYGLSADGVAGS 99

Query: 160 STLEAM 165
           +T   +
Sbjct: 100 ATFSKI 105


>gi|229085545|ref|ZP_04217781.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-44]
 gi|228697766|gb|EEL50515.1| Spore cortex-lytic enzyme [Bacillus cereus Rock3-44]
          Length = 252

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 46/149 (30%), Gaps = 9/149 (6%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   
Sbjct: 31  QAFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQQKFGLPVD 88

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G+  S T + M V      +             +     +    N+P           + 
Sbjct: 89  GLAGSKT-KQMLVKATKYEKSTANKGN--TGGGQASKPTQNKGTNVPNG----YSQNDIQ 141

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           L +  + G    +  +    +  ++ N  
Sbjct: 142 LMANAVYGESRGEPYLGQVAVAAVILNRV 170


>gi|227549428|ref|ZP_03979477.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227078505|gb|EEI16468.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 369

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 18/135 (13%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH---- 103
           + D +D  +   +    S   ++    +A++ KA    + I+  G    + +R L     
Sbjct: 1   MLDGYDGKVGEWNSRQFSHEEMLFDAHLAESLKAFQQSRGIVPTGDIDTVTLRELREASY 60

Query: 104 -LGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            LG                V+RL+E+L   G       +   F+     A+  +Q+  GL
Sbjct: 61  TLGARVLSFQPNQIMVGDDVRRLQEQLQELGFYSHR--VDGHFNRQTHKALVNYQINSGL 118

Query: 152 DPSGMVDSSTLEAMN 166
           +  G+  S+TL A++
Sbjct: 119 EGDGVCGSATLHALS 133


>gi|311068413|ref|YP_003973336.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus atrophaeus 1942]
 gi|310868930|gb|ADP32405.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage-related protein
           [Bacillus atrophaeus 1942]
          Length = 274

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP              +V ++++ L            + G+   + A   +AVK FQ  
Sbjct: 193 TLPSGIFKVKSPLMKGAAVTKIQKALAALYFYPDKGAENNGIDGYYGAKTANAVKRFQSM 252

Query: 149 HGLDPSGMVDSSTLEAMNVPVD 170
           +GL   G+    +   +     
Sbjct: 253 YGLTADGIYGPKSKAKLESLPK 274


>gi|288921344|ref|ZP_06415625.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288347255|gb|EFC81551.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 247

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 96  ELPIRPLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            +    + LG S     V  ++++L   G       +   F       V  FQ +HGL P
Sbjct: 177 TVDSGYMRLGVSGPRWDVSLVQDQLRKLGY---PIVVDGYFGPQTNHMVIDFQKKHGLVP 233

Query: 154 SGMVDSSTLEAM 165
            G++   T +A+
Sbjct: 234 DGVIGPLTHKAL 245


>gi|254562159|ref|YP_003069254.1| hypothetical protein METDI3765 [Methylobacterium extorquens DM4]
 gi|254269437|emb|CAX25403.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 212

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 60/204 (29%), Gaps = 51/204 (25%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
             M +     +      L R       +  +  ++V      L  V+     +R  V VG
Sbjct: 51  AWMTLAPKAPLDP---ALARTTVDFVTREPVGTLVVETAERRLYLVQPSGKAMRYPVSVG 107

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R         + I+R +  P W     +I +                             
Sbjct: 108 RAG-LAWTGRAEIDRKLEWPDWNPAPDMIGRH---------------------------- 138

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFE 339
                      P+   R + G  + + +  +      ++  Y +H T EP          
Sbjct: 139 -----------PDLPSRLEGGPFSPIGARALYLAQNRKDTLYRIHGTNEPETIGQ---AV 184

Query: 340 TSGCVRV--RNIIDLDVWLLKDTP 361
           +SGC+R+   +++DL   +   T 
Sbjct: 185 SSGCIRMLNEDVMDLYERVPVGTK 208


>gi|16079350|ref|NP_390174.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221310211|ref|ZP_03592058.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221314534|ref|ZP_03596339.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221319456|ref|ZP_03600750.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323732|ref|ZP_03605026.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|1730903|sp|P50739|SLEB_BACSU RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|1146210|gb|AAC83957.1| spore cortex lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
 gi|1688023|dbj|BAA11473.1| spore-cortex-lytic enzyme prepeptide [Bacillus subtilis]
 gi|2634711|emb|CAB14209.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 305

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 29  AFSNQVIQRGATGDDVVELQARLQYNGYY--NGKIDGVYGWGTYWAVRNFQDQFGLKEVD 86

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 87  GLVGAKT 93


>gi|84686748|ref|ZP_01014635.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665179|gb|EAQ11658.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 179

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 62/206 (30%), Gaps = 51/206 (24%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G    +T  A  V +  R     VN  R   +     G  +V+ +     L  +    + 
Sbjct: 2   GCFLPTTAWAHKVKLPERFEPQLVNTRRGDWV----KGDVHVVPD--DFFLYFMLEDGMA 55

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           +R  V VGR     P     + R    P+W    ++I+++     +              
Sbjct: 56  IRYGVGVGRKGLYEP-GEFTVARKAKWPWWRPTNAMIRREPRKYAK-------------- 100

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN--TY--MHDTPEPI 330
                                +      G  N + +  +  Y      TY  +H T  P 
Sbjct: 101 ---------------------YKDGLKGGPNNPLGARALYLYDAEGRDTYLRIHGTNAPE 139

Query: 331 LFNNVVRFETSGCVRVRN--IIDLDV 354
              +     ++GC R+ N  + DL  
Sbjct: 140 TIGS---AVSNGCARLTNEHVKDLYE 162


>gi|115524050|ref|YP_780961.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115517997|gb|ABJ05981.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 424

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 58/192 (30%), Gaps = 48/192 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P      QL  +L R +     K     ++V+     L  +  G   +R  V VGR D
Sbjct: 216 EQPEAETNIQLPPHLRRQEVSFPTKEPAGTIVVDTANTHLYYILGGGRAVRYGVRVGR-D 274

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +I+R    P W  P  +I++                                
Sbjct: 275 GFTWNGVQKISRKAEWPDWHPPSEMIERQ------------------------------- 303

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 304 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 350

Query: 345 RVRN--IIDLDV 354
            + N  + DL  
Sbjct: 351 GMLNDDVSDLFE 362


>gi|86357640|ref|YP_469532.1| hypothetical protein RHE_CH02021 [Rhizobium etli CFN 42]
 gi|86281742|gb|ABC90805.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 203

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 49/176 (27%), Gaps = 46/176 (26%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              ++G   +++     +L    +        + VGR  +Q     +R+     +P W  
Sbjct: 66  PSTRVGRGTIVIATREHTLIYTTSEGEQFAYPIAVGREGKQ-WYGTTRVVSKRLHPEWRP 124

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             S+ QK                                        P       PG  N
Sbjct: 125 TASMRQK---------------------------------------NPRLPAVVKPGPAN 145

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            + +  I         +H T +P          +SGC R+   ++ +L   +   T
Sbjct: 146 PLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYREDVEELYDMVQPGT 197


>gi|154246768|ref|YP_001417726.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154160853|gb|ABS68069.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 419

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 50/186 (26%), Gaps = 46/186 (24%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
                +     R             ++++ P   L  V  G   +R  + VGR    T  
Sbjct: 237 DPTEPVPERFRRQTVDYVTTQPAGTIIIDTPNTYLYYVVGGGKAIRYGIGVGREG-FTWS 295

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
              +I+R    P W  P  +IQ+                                     
Sbjct: 296 GTQKISRKAEWPDWRPPSEMIQRQ------------------------------------ 319

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              P        G  N M +  +   S     +H T EP        F +SGC R+ N  
Sbjct: 320 ---PYLPRFMAGGPGNPMGARALYLGSTE-YRIHGTNEPQTIGK---FVSSGCFRLLNAD 372

Query: 351 --DLDV 354
             DL  
Sbjct: 373 IEDLFD 378


>gi|291484719|dbj|BAI85794.1| spore cortex-lytic enzyme [Bacillus subtilis subsp. natto BEST195]
          Length = 305

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 29  AFSNQVIQRGATGDDVVELQARLQYNGYY--NGKIDGVYGWGTYWAVRNFQDQFGLKEVD 86

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 87  GLVGAKT 93


>gi|321311765|ref|YP_004204052.1| spore cortex-lytic enzyme [Bacillus subtilis BSn5]
 gi|320018039|gb|ADV93025.1| spore cortex-lytic enzyme [Bacillus subtilis BSn5]
          Length = 305

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 29  AFSNQVIQRGATGDDVVELQARLQYNGYY--NGKIDGVYGWGTYWAVRNFQDQFGLKEVD 86

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 87  GLVGAKT 93


>gi|146343599|ref|YP_001208647.1| putative ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
 gi|146196405|emb|CAL80432.1| conserved hypothetical protein; putative signal peptide; putative
           ErfK/YbiS/YcfS/YnhG [Bradyrhizobium sp. ORS278]
          Length = 197

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 51/185 (27%), Gaps = 19/185 (10%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  G +  LV      L          R  V+  R     P     ++      Y V P
Sbjct: 28  SEDPGDQPGLVADDGYEL------DPEWRKQVVYFR--TTEPPGTIIVSTAERYLYLVQP 79

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                +  + + R      +   +  I +K +              P        G  N 
Sbjct: 80  GGRAIRYGIGVGRDG---FQWQGLLQITKKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNP 136

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWS 364
           + +  +        Y +H T +P          +SGC R+ N    DL   +   T    
Sbjct: 137 LGARAMYL--GTTVYRIHGTNQPWTIGTK---ISSGCFRLVNADVADLFDRVPVGTKVVV 191

Query: 365 RYHIE 369
           R   E
Sbjct: 192 RQKPE 196


>gi|239831235|ref|ZP_04679564.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823502|gb|EEQ95070.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 265

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 42/183 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             L + ++    +R +        +  ++V+  A  L  V+ G   +R +V VGR    T
Sbjct: 88  PALDVSKIADRNLRREVDYATNEPVGTIVVDPYARYLYLVQPGGKAIRYSVGVGRAG-LT 146

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +++      P W    ++I        +++P++                       
Sbjct: 147 FSGDAKVAYKSQWPRWTPTANMI--------KRNPEHYAK-------------------- 178

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                  +    + G  N + +  +  Y   ++  Y +H T EP          +SGC+R
Sbjct: 179 -------YANGLEGGIRNPLGARALYLYRDGKDTLYRIHGTNEPWSVGK---AASSGCIR 228

Query: 346 VRN 348
           + N
Sbjct: 229 LYN 231


>gi|222085235|ref|YP_002543765.1| hypothetical protein Arad_1387 [Agrobacterium radiobacter K84]
 gi|221722683|gb|ACM25839.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 268

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 42/189 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +++    +R +   +       ++V+  +  L  VE G   +R  V +G      
Sbjct: 104 PAIPYKRIDPQFLRQEVDYQTNERPGTIVVDTRSHYLYFVEPGGRAMRYGVGLGAAG-YA 162

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ ++    +R  P   +   +                 
Sbjct: 163 WHGRGVIQWKAKWPRWTPPAEMVARE--PQIR--PISAERGGM----------------- 201

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       +PG  N + +  +      ++  Y +H TP+        R  +SGCVR
Sbjct: 202 ------------NPGPTNPLGARALYIFKDGKDTLYRVHGTPDWQSIG---RAASSGCVR 246

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 247 MLNQDVIDL 255


>gi|218463531|ref|ZP_03503622.1| hypothetical protein RetlK5_30714 [Rhizobium etli Kim 5]
          Length = 293

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 100 QFHQTYGLPVTNPVHAAMYGELRDEDFTQPSIPVSRVQPQFLRQEVDYQTTERPGTVVVD 159

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W  P      +M++  
Sbjct: 160 TKARFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTPPV-----EMVSRQ 213

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
            +   +  +N                               +PG  N + +  +      
Sbjct: 214 PEVRAFSVENGGM----------------------------NPGLQNPLGARAMYIFKDG 245

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 246 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPAKAE 289


>gi|309811331|ref|ZP_07705118.1| NlpC/P60 family protein [Dermacoccus sp. Ellin185]
 gi|308434638|gb|EFP58483.1| NlpC/P60 family protein [Dermacoccus sp. Ellin185]
          Length = 350

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   +V+ ++ +L +             F     SAVK FQ  +GL   G+V   
Sbjct: 52  VLFFGSRGEAVKAIQAQLQV--------NADGIFGPATLSAVKSFQRSNGLYADGIVGKL 103

Query: 161 TLEAMNV 167
           T   +  
Sbjct: 104 TWAKLAA 110



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 8/68 (11%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G++   V+ L+              +   F     + V  FQ ++GL   G+V 
Sbjct: 136 TTTLRFGSTHALVKVLQS--------KVGVEVDGIFGRATRAGVVSFQAQNGLYADGIVG 187

Query: 159 SSTLEAMN 166
             T   + 
Sbjct: 188 KLTWSKLG 195


>gi|298290305|ref|YP_003692244.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296926816|gb|ADH87625.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 332

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 44/180 (24%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                + +     R             ++V+  A  L  ++     +R  + VG+   Q 
Sbjct: 178 PSTGAKGVDRKFDRHVVRYSSSDPAGTIIVDTGARYLYLIQGDGTAVRYGIGVGKEGFQ- 236

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                RI+R    P W  P  ++ +                                   
Sbjct: 237 WAGSERISRKAEWPEWRPPSEMLDRR---------------------------------- 262

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                P+       G+ N + +  +    ++   +H + EP          +SGC+R+RN
Sbjct: 263 -----PDLPRVMPGGEDNPLGARALYLG-KSLYRIHGSNEPETIGQ---AVSSGCIRMRN 313


>gi|291439401|ref|ZP_06578791.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342296|gb|EFE69252.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 390

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 6/78 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L  R     +     + L+  L+  G           F    + AV  FQ R+ L  
Sbjct: 235 WPLLRKRT---EDQYTRGRALQHLLMAHGY---EVKADGFFGDETQDAVMDFQRRNHLPS 288

Query: 154 SGMVDSSTLEAMNVPVDL 171
            G V   T  A+  PV  
Sbjct: 289 DGKVGKDTWPALVKPVGP 306



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           + +  WP L  +P+  G    +V  L+E L  +G       +S  F A     ++ FQ  
Sbjct: 292 VGKDTWPALV-KPVGPGADEHTVLALQELLHNTG--QGGTEVSGEFTAATAEDLRFFQRG 348

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           H L P+G  D  T  A+ V
Sbjct: 349 HDLPPTGRADVDTWLALLV 367


>gi|260888125|ref|ZP_05899388.1| LysM domain/NLP/P60 family protein [Selenomonas sputigena ATCC
           35185]
 gi|330839997|ref|YP_004414577.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
 gi|260862154|gb|EEX76654.1| LysM domain/NLP/P60 family protein [Selenomonas sputigena ATCC
           35185]
 gi|329747761|gb|AEC01118.1| NLP/P60 protein [Selenomonas sputigena ATCC 35185]
          Length = 278

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L    L   +    V +L++ L  +G L         F +  +SAV  FQ    L  +G
Sbjct: 24  ALAAPILSENSHGHDVFKLQKELKRTGYLSDEP--DGIFGSRTKSAVLAFQRAQSLKETG 81

Query: 156 MVDSSTLEAMN 166
           +VD  T   + 
Sbjct: 82  VVDRETWSRLQ 92


>gi|163757533|ref|ZP_02164622.1| hypothetical protein HPDFL43_19022 [Hoeflea phototrophica DFL-43]
 gi|162285035|gb|EDQ35317.1| hypothetical protein HPDFL43_19022 [Hoeflea phototrophica DFL-43]
          Length = 217

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 55/218 (25%)

Query: 153 PSGMVDSST----------LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
             G+  ++T           +A      + I +++    R             ++V+ P 
Sbjct: 25  QDGVSGTTTQIFTSEYGSVKDAGYRIPAVPISKVKDRYHRQIVSYRTLEKPGTIIVDTPN 84

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L  V  G+  +R  + VG+         + I      P W  P+ +I  +    L + 
Sbjct: 85  RYLYFVLPGRKAVRYGIGVGKAGFA-WEGEAYIAWKQAWPKWTPPKEMI--ERKPELAR- 140

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNT- 321
                 + +                              PG  N + +  +  ++ +   
Sbjct: 141 ---YGKDGM-----------------------------KPGLSNPLGARALYLFNEDGED 168

Query: 322 ---YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
               +H TPE           +SGC+R+  ++IIDL  
Sbjct: 169 TLFRLHGTPEWNSIGT---AASSGCIRLMNQDIIDLYD 203


>gi|114707874|ref|ZP_01440767.1| hypothetical protein FP2506_00175 [Fulvimarina pelagi HTCC2506]
 gi|114536652|gb|EAU39783.1| hypothetical protein FP2506_00175 [Fulvimarina pelagi HTCC2506]
          Length = 228

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 61/176 (34%), Gaps = 42/176 (23%)

Query: 178 VNLMRIKKLLEQKMGLR--YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           V     ++L++   G +   ++V+     L  V+ G   LR  + VGR    +    +R+
Sbjct: 56  VAPQYWRQLVDDPTGEQPGTLVVDPDEKYLYLVQEGGQALRYGIGVGRQG-FSWSGSARV 114

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
                 P W  PR +I++                              E   +++     
Sbjct: 115 QYKKQWPTWTPPREMIERQ----------------------------PELEPYSAANGGM 146

Query: 296 FIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                 PG  N + +  +  +    +  Y +H +PE        R  +SGC+R+ N
Sbjct: 147 -----PPGLSNPLGARALYLFQDGVDTLYRIHGSPEANSIG---RAVSSGCIRLLN 194


>gi|332710724|ref|ZP_08430665.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332350501|gb|EGJ30100.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 368

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                   V+ +++ L  +G    S      +    E  VK FQ ++GLD  G+V  +T 
Sbjct: 307 QPYMKGEDVRAIQQALAKAGY---SLEPDGVYGPGSEGVVKQFQEQNGLDVDGVVGPATR 363

Query: 163 EAMN 166
             M 
Sbjct: 364 AKMG 367


>gi|291298292|ref|YP_003509570.1| zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
 gi|290567512|gb|ADD40477.1| Zinc D-Ala-D-Ala carboxypeptidase [Stackebrandtia nassauensis DSM
           44728]
          Length = 263

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 4/133 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G +   V++L+ R+    +      +   F     +AVK FQ  +GL  +G  D++T
Sbjct: 49  LASGATGDDVKQLQIRVFGYPEYGKQLAVDGQFGPATTAAVKRFQQAYGLSQTGKGDAAT 108

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
                   D     +      +        G +       A +L  +            +
Sbjct: 109 YAKFYELQDDDCTPIHFTYAELNDCNSDWSGGKVSAAEAKANALRVM---WSLEAMRHAL 165

Query: 222 G-RVDRQTPILHS 233
           G +    T    S
Sbjct: 166 GDKPITVTSGFRS 178


>gi|116251064|ref|YP_766902.1| hypothetical protein RL1297 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|241203660|ref|YP_002974756.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|115255712|emb|CAK06793.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|240857550|gb|ACS55217.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 244

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   Q+     R + +         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEQIDPRYYRQRVVDPTGQPPGTIVVDTPSRFLYLVQGDGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 138 WQGSGVIQWRQRWPRWKPPNEMVARQ----------------------------PELVKY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           +PG  N + +  +  F +  +  Y +H  P+           +SGCVR
Sbjct: 170 SIENGGM-----EPGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LMNQDIIDLYDRVPTKAP 239


>gi|186685970|ref|YP_001869166.1| glycoside hydrolase family protein [Nostoc punctiforme PCC 73102]
 gi|186468422|gb|ACC84223.1| glycoside hydrolase, family 25 [Nostoc punctiforme PCC 73102]
          Length = 263

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+S + V++L+++L   G    +  +   F   V++A+  FQ    L   G+V   T
Sbjct: 199 LQLGDSGLRVKQLQQQLKDIGLY--TDAIDGKFSESVKNAIVSFQTSKKLQADGIVGIKT 256

Query: 162 LEAM 165
             A+
Sbjct: 257 WVAL 260


>gi|255526573|ref|ZP_05393481.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296187551|ref|ZP_06855946.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
 gi|255509758|gb|EET86090.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296048073|gb|EFG87512.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
          Length = 125

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                  S  +   +      +H T  P          ++GC+R+ N  +I+L   +   
Sbjct: 63  NPGGPFGSRWLGLNAPYGDYGIHGTNTPSSIGKS---ISNGCIRMFNNQVIELSNLVPIG 119

Query: 360 T 360
           T
Sbjct: 120 T 120



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
             +      Y+ +N  + +L    N  +     V VG+    TP    +I     NP  
Sbjct: 8   YTQSYRAKYYIKINTQSHTLTLFRNNSIYKTYRVAVGKPSTPTPKGTFKIINRAINPGG 66


>gi|288556278|ref|YP_003428213.1| sporulation protein-like protein [Bacillus pseudofirmus OF4]
 gi|288547438|gb|ADC51321.1| sporulation protein-like protein [Bacillus pseudofirmus OF4]
          Length = 187

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-G 150
             W       L +G+   +V+ L+  L    D+     +   +      AV  FQ R   
Sbjct: 111 NTWG-FSNEVLKVGSRGEAVKTLQRGLK---DMSYHVAVDGVYGPQTRDAVIKFQERFPS 166

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+    T E M+ 
Sbjct: 167 LANDGIFGPRTKEVMDK 183



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 3/69 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM-RHGLDPSGMV 157
              L  G+   +V+ ++  L     +         F    ++AV  FQ  +  L   G+ 
Sbjct: 41  SGTLKEGSRGENVKIMQRALNRE--MGAELTEDGIFGPNTKTAVLAFQKTKSELKNDGIY 98

Query: 158 DSSTLEAMN 166
             +T +A++
Sbjct: 99  GPATHKALS 107


>gi|296087729|emb|CBI34985.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 8/112 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L  S            FD  VESA+K +Q  + L+ +G +D
Sbjct: 23  GDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYHLNATGSLD 82

Query: 159 SSTLEAMNVPVDLRIRQLQVN--LMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           S T+  M  P       +     +   +    +       L   P+ ++  V
Sbjct: 83  SETVSQMVKPRCGAADIINGTNWMRSPRWPPSKTYLTYAFLPGTPSWAMSPV 134


>gi|224092308|ref|XP_002309552.1| predicted protein [Populus trichocarpa]
 gi|222855528|gb|EEE93075.1| predicted protein [Populus trichocarpa]
          Length = 243

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             G+    V +L++ L   G L+       +     FD  +E A+K +Q+   L P+G++
Sbjct: 48  KKGDKVEGVDQLKKLLHHFGYLNHGGLNNDEVDDDYFDETIERALKTYQINFNLKPTGVL 107

Query: 158 DSSTLEAMNVP 168
           D+ T+  M  P
Sbjct: 108 DAETVSLMMKP 118


>gi|186681402|ref|YP_001864598.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186463854|gb|ACC79655.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 283

 Score = 55.4 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V+ L+  L   G           F    E  VK FQ  +GL   G+V ++T   +
Sbjct: 119 DAVKELQIILNEEGFFKKEP--DGYFSRETERGVKRFQRTYGLKDDGIVGAATWAVL 173



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            S+  L+ERL     L     +S  FD   E AV  FQ  + L   G+V   +  
Sbjct: 48  ESINELQERLQAQDFLS---TISGKFDLETEEAVIKFQKANNLQVDGIVGPLSWA 99


>gi|289642455|ref|ZP_06474600.1| cell wall hydrolase/autolysin [Frankia symbiont of Datisca
           glomerata]
 gi|289507714|gb|EFD28668.1| cell wall hydrolase/autolysin [Frankia symbiont of Datisca
           glomerata]
          Length = 447

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 40/137 (29%), Gaps = 14/137 (10%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
                +      +    +D  ++ D   + +   A  +        I+    +  L    
Sbjct: 85  APDTPMPAAARFDAARELDAALEFDA-ALDRAVRAFQQSRGLSADGIVGPDTFRALEEAR 143

Query: 102 LHLGNS-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
             LG+               V  L+ERL   G           F    E+A++ FQ    
Sbjct: 144 RKLGDRLLFYSVNHPFIGDDVASLQERLSNMGF--DVGRTDGIFGPRTEAALRDFQYNRA 201

Query: 151 LDPSGMVDSSTLEAMNV 167
           L+P G     TL  +  
Sbjct: 202 LEPDGRCGPLTLRELKK 218


>gi|332799121|ref|YP_004460620.1| cell wall hydrolase SleB [Tepidanaerobacter sp. Re1]
 gi|332696856|gb|AEE91313.1| cell wall hydrolase SleB [Tepidanaerobacter sp. Re1]
          Length = 228

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           +L  R L  G     V +L++ L   G                  A+  FQ   GL   G
Sbjct: 27  QLGDRVLTKGCRGQDVAQLQQVLNNKGFWSGYA--DGILGNKTVDALVKFQKAKGLKADG 84

Query: 156 MVDSSTLEAMNVPVDLR 172
           +    T  A+ V    R
Sbjct: 85  IAGFETFSALGVDTSYR 101


>gi|118591628|ref|ZP_01549024.1| hypothetical protein SIAM614_21832 [Stappia aggregata IAM 12614]
 gi|118435621|gb|EAV42266.1| hypothetical protein SIAM614_21832 [Stappia aggregata IAM 12614]
          Length = 220

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 50/209 (23%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVN-----LMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
            G  D +T  A        I  +Q        +R       K     ++V+     L  +
Sbjct: 38  DGTPDYATAYAARTDGGFAIPAIQYQKFDPKYLRQVVFYPSKYPSGTIVVDPANKFLYLI 97

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G   +R  + VGR         + I      P W  P  +I++D    L +       
Sbjct: 98  QPGGRAIRYGIGVGRAGFA-WNGEAEIRFKREWPKWFPPDEMIERD--PKLEK------- 147

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHD 325
                                      +   Q+ G  N + +  +  +  +++  Y +H 
Sbjct: 148 ---------------------------YRDGQEGGPSNPIGARGLYLWQGNKDTLYRIHS 180

Query: 326 TPEPILFNNVVRFETSGCVRV--RNIIDL 352
           T +P          +SGC+R+  ++IIDL
Sbjct: 181 TNQPSSIGTN---ASSGCIRMWHQDIIDL 206


>gi|27383297|ref|NP_774826.1| hypothetical protein blr8186 [Bradyrhizobium japonicum USDA 110]
 gi|27356471|dbj|BAC53451.1| blr8186 [Bradyrhizobium japonicum USDA 110]
          Length = 224

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 53/204 (25%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G+    TL A+++            ++R +        +  ++++  A  L  VE    
Sbjct: 48  DGV---YTLPAVDISGVDPA------MLRQRVDYTTNEPVGTIVIDTAAHQLYLVEGDGK 98

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +R  + VG+ D       + I R    P+W   ++++ ++                   
Sbjct: 99  AMRYGIGVGK-DGLAFAGTATIRRKAEWPHWTPTKNMMNREPA----------------- 140

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPI 330
                                +       G  N +    +      R+  + +H T EP 
Sbjct: 141 ------------------RYGHLASGMAGGLGNPLGPRALYLFQGERDTMFRIHGTTEPE 182

Query: 331 LFNNVVRFETSGCVRV--RNIIDL 352
                 R  +SGC+R+  ++IIDL
Sbjct: 183 TIG---RAVSSGCIRLINQDIIDL 203


>gi|168052912|ref|XP_001778883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669752|gb|EDQ56333.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 648

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   V  L+  L   G L     L+  F    + A++ FQ+ HG+  +G   SS+ +A+
Sbjct: 206 DSGPQVLDLQRTLYWFGYLPNRTALTAYFGPETKKALQQFQIAHGVPATGAWGSSSRQAL 265


>gi|239931029|ref|ZP_04687982.1| Peptidoglycan-binding domain 1 protein [Streptomyces ghanaensis
           ATCC 14672]
          Length = 370

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 6/78 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L  R     +     + L+  L+  G           F    + AV  FQ R+ L  
Sbjct: 215 WPLLRKRT---EDQYTRGRALQHLLMAHGY---EVKADGFFGDETQDAVMDFQRRNHLPS 268

Query: 154 SGMVDSSTLEAMNVPVDL 171
            G V   T  A+  PV  
Sbjct: 269 DGKVGKDTWPALVKPVGP 286



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           + +  WP L  +P+  G    +V  L+E L  +G       +S  F A     ++ FQ  
Sbjct: 272 VGKDTWPALV-KPVGPGADEHTVLALQELLHNTG--QGGTEVSGEFTAATAEDLRFFQRG 328

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           H L P+G  D  T  A+ V
Sbjct: 329 HDLPPTGRADVDTWLALLV 347


>gi|146338532|ref|YP_001203580.1| hypothetical protein BRADO1451 [Bradyrhizobium sp. ORS278]
 gi|146191338|emb|CAL75343.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 177

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 47/174 (27%), Gaps = 45/174 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R   + +       ++VN     L  V  G   LR  + VGR D        RI      
Sbjct: 35  RQTVMFDSNYAPGTIVVNTSERRLYLVLQGGQALRYGIGVGR-DGFRWSGVHRITAKKEW 93

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 94  PAWTPPAQMLRRR---------------------------------------PDLPRHMA 114

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            G  N + +  +         +H + EP          +SGC R+ N  D+   
Sbjct: 115 GGIENPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTN-DDVADL 163


>gi|269103521|ref|ZP_06156218.1| general secretion pathway protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163419|gb|EEZ41915.1| general secretion pathway protein A [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 547

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G     V  L ++L     L   +     FD  +   ++ FQ    L+  G+    
Sbjct: 469 SIRYGQQGPRVAWLNQQLNT--FLGEPQTNQNYFDQGLVDKLRRFQRSQSLNADGIAGKQ 526

Query: 161 TL 162
           TL
Sbjct: 527 TL 528


>gi|217977237|ref|YP_002361384.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217502613|gb|ACK50022.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 195

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 46/196 (23%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
           P +L  R       R     + K     ++++     L  +  G   +R  + VGR    
Sbjct: 40  PAELTARPRPTAPPRELVPYDGKYTAGTIVISTQERRLYYILPGNQAVRYGIGVGRPG-F 98

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T      +      P W  P  ++++                                  
Sbjct: 99  TWKGDKTVAMKREWPSWRPPAQMLRRR--------------------------------- 125

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                 P+     + G  N + +  +         +H + EP          +SGC+R+ 
Sbjct: 126 ------PDLPRFMEGGPDNPLGARAMYLGGS-LYRIHGSNEPQTIGQ---AVSSGCIRMT 175

Query: 348 N--IIDLDVWLLKDTP 361
           N  ++DL   +   T 
Sbjct: 176 NEDVVDLYDRVRVGTK 191


>gi|171913252|ref|ZP_02928722.1| hypothetical protein VspiD_18770 [Verrucomicrobium spinosum DSM
           4136]
          Length = 216

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 54/204 (26%), Gaps = 43/204 (21%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +       P   R +Q +          +   G   V++++        + G++   S
Sbjct: 43  GQTQYMEGYDPGLPRGQQFRQTDSSSWWRGDGVPGPAKVVISLGQQRAFFYKGGELVGES 102

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            +  G     TP     I++   +                   Q   Y+  +   +++  
Sbjct: 103 AISSGDEQHPTPTGRYSISQKNAD---------------HKSSQYGDYVDSSGNVVVENI 147

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGK--INAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
            +                    Q PG     A+    + F       MH    P      
Sbjct: 148 DRHSDP----------------QPPGTRYDGAIMPYFMRFTG--GIGMHAGYLPGY---- 185

Query: 336 VRFETSGCVRVRNIIDLDVWLLKD 359
               + GCVR+    D+     ++
Sbjct: 186 --PASHGCVRM--PRDMAQAFFRN 205


>gi|163744654|ref|ZP_02152014.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanibulbus
           indolifex HEL-45]
 gi|161381472|gb|EDQ05881.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanibulbus
           indolifex HEL-45]
          Length = 187

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 300 QDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           Q  G  N + +  +  F +  +TY  +H T +P       R  ++GC+R+   +++DL  
Sbjct: 120 QPGGPGNPLGARALYLFQNGRDTYFRIHGTTQPNSIG---RSVSNGCIRMLNEHVVDLYQ 176

Query: 355 WLLKDT 360
            +   T
Sbjct: 177 RVPIGT 182


>gi|317125458|ref|YP_004099570.1| ErfK/YbiS/YcfS/YnhG family protein [Intrasporangium calvum DSM
           43043]
 gi|315589546|gb|ADU48843.1| ErfK/YbiS/YcfS/YnhG family protein [Intrasporangium calvum DSM
           43043]
          Length = 202

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 42/142 (29%), Gaps = 12/142 (8%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE---AMNVPVD 170
           ++ RL   G           +     +A+  FQ + G   +G+ D  T +   +M  P  
Sbjct: 1   MQARLKQIGWFSGEVTS--FYGTRTTTAISGFQRKRGFPVTGVADQRTYDRLLSMTRPPT 58

Query: 171 L------RIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                    +    +    K   + + +  R + ++    SL  V +G       V  G 
Sbjct: 59  QDELNNVTPQPPATSPGTAKWDADPRCLTGRVICISKTTRSLTWVIDGTAQYSMDVRFGS 118

Query: 224 VDRQTPILHSRINRIMFNPYWV 245
               T      I     +    
Sbjct: 119 EAEPTREGVFSITWKKVDVISN 140


>gi|163802698|ref|ZP_02196589.1| putative general secretion pathway protein A [Vibrio sp. AND4]
 gi|159173586|gb|EDP58406.1| putative general secretion pathway protein A [Vibrio sp. AND4]
          Length = 541

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L       ++  L + L  +  ++     S  +D+ ++  V+LFQ   G+  
Sbjct: 453 WQAPLRDTLRSDMEGPAIDVLDQLLAQA--VNEQPLGSEVYDSELKERVELFQRWQGIGV 510

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL-QVNLMR 182
            G+    TLE +   V +    L ++N   
Sbjct: 511 DGIAGKQTLERLQQSVQIDAPPLKEINEED 540


>gi|218512244|ref|ZP_03509084.1| hypothetical protein Retl8_00424 [Rhizobium etli 8C-3]
          Length = 183

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 55/190 (28%), Gaps = 45/190 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++V+ PA     V      +R  V VGR      
Sbjct: 21  QVPIDKIKPELRRQEVAYETTHAAGTIVVDTPARRAYYVLGDGRAMRYGVGVGREG-LAF 79

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + I R    P W    ++ +++                                   
Sbjct: 80  AGDAYIGRKAEWPSWTPTENMQRRE----------------------------------- 104

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +  Y         +H T +P          +SGC+R+
Sbjct: 105 -ERYRKLAGGMPGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCIRM 160

Query: 347 --RNIIDLDV 354
              ++IDL  
Sbjct: 161 MNHDVIDLYD 170


>gi|92118412|ref|YP_578141.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91801306|gb|ABE63681.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 354

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 48/190 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           +QL   L R +     K     ++V+     L  +      +R  V VGR D  T     
Sbjct: 147 KQLAPRLRRQEVTFATKEPPGTLVVDTSNTYLYYILGNNRAIRYGVRVGR-DGFTWAGVQ 205

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +I+R    P W  P  +I++                                        
Sbjct: 206 KISRKAEWPDWHPPTEMIERQ--------------------------------------- 226

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNII 350
           P        G  N + +  +   S    Y +H T +P        F +SGC+ +   ++ 
Sbjct: 227 PYLPRFMAGGPGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGMLNEDVS 281

Query: 351 DLDVWLLKDT 360
           DL   +   T
Sbjct: 282 DLFDRVKVGT 291


>gi|330466015|ref|YP_004403758.1| peptidase M15A [Verrucosispora maris AB-18-032]
 gi|328808986|gb|AEB43158.1| peptidase M15A [Verrucosispora maris AB-18-032]
          Length = 262

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G S   V+ L+ R+           L   +     +AV+ FQ  +GL   G+  
Sbjct: 40  DRTLSQGRSGSDVRELQLRVAGWAGNRDIVELDGRYGPKTAAAVRRFQSAYGLTADGIAG 99

Query: 159 SSTLEAM 165
             T   +
Sbjct: 100 PQTFAKL 106


>gi|295703844|ref|YP_003596919.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
 gi|294801503|gb|ADF38569.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
          Length = 111

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 6/58 (10%)

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                +         +H T +P      +   + GCVR+ N  I++L   +   TP +
Sbjct: 55  FGPLWMGLSKP-TYGIHGTNDPASIGRDM---SHGCVRMDNEDILELSSVVPIGTPVY 108


>gi|226944381|ref|YP_002799454.1| general secretion pathway protein A [Azotobacter vinelandii DJ]
 gi|226719308|gb|ACO78479.1| General secretion pathway protein A [Azotobacter vinelandii DJ]
          Length = 570

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           A T +    Y  +      P +  R L  G+    V  +  +L         +     F 
Sbjct: 471 ALTLRWSGRYVRLQQA---PLIHGRHLSHGSRGADVAWVDLQLERWEGRSRPRAGDPLFG 527

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +E  V+ FQ  +GL   G+V + TLE +  
Sbjct: 528 DDLERRVRRFQQANGLRADGVVGAQTLERLAR 559


>gi|206577142|ref|YP_002237024.1| peptidoglycan binding domain/papain family cysteine protease
           [Klebsiella pneumoniae 342]
 gi|206566200|gb|ACI07976.1| peptidoglycan binding domain/papain family cysteine protease
           [Klebsiella pneumoniae 342]
          Length = 962

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 8/67 (11%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDP 153
           + L  G+S   V  LR+RL  +  L            S  FDA + SAV+ +Q   G+  
Sbjct: 3   KLLLQGSSGPEVVELRKRLAKT--LGADAKMFALPSNSDTFDATLASAVRHWQSNIGIIA 60

Query: 154 SGMVDSS 160
            G+V   
Sbjct: 61  DGVVGPY 67


>gi|7159629|emb|CAB76364.1| matrix metalloproteinase [Cucumis sativus]
          Length = 320

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 45/100 (45%), Gaps = 6/100 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           HLG++   + ++++ L   G +        +      FD  +ESA+K +Q  H L PSG+
Sbjct: 55  HLGDTKQGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLAPSGI 114

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           +DS+T+  + +P       ++    + +       G  + 
Sbjct: 115 LDSNTIAQIAMPRCGVQDVIKNKKTKKRNQNFTNNGHTHF 154


>gi|304407661|ref|ZP_07389312.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
 gi|304343144|gb|EFM08987.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
          Length = 487

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L        V+ L++ L   G           F A  + AV+ FQ    L  +G+V+
Sbjct: 390 SSELRKDQLGDDVRSLQQMLKALGY--KVDRSDGYFSAVTDQAVRQFQQASDLPVNGVVN 447

Query: 159 SSTLEAMNVPVDLRIR 174
           ++T +A+   V   IR
Sbjct: 448 NATADAIEKEVVAWIR 463


>gi|205373812|ref|ZP_03226614.1| spore cortex-lytic enzyme [Bacillus coahuilensis m4-4]
          Length = 319

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     V  L+ RL   G    +  +   F      AV+ FQ   G++  G V   T
Sbjct: 41  GAVGEDVVELQARLQYIGFY--NGKIDGVFGWGTYWAVRNFQYEFGMEVDGFVGEET 95


>gi|326502188|dbj|BAJ98922.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++T+ 
Sbjct: 58  GDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAATVA 117

Query: 164 AMNVP 168
            M  P
Sbjct: 118 KMMSP 122


>gi|326488589|dbj|BAJ93963.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534164|dbj|BAJ89432.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 365

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    + RL++ L   G L  P    +  FDA +E+A++ +Q   GL+ +G +D++T+ 
Sbjct: 58  GDERQGLARLKDYLSRFGYLPAPPAKFNDMFDADMETAIRTYQHNFGLEATGQLDAATVA 117

Query: 164 AMNVP 168
            M  P
Sbjct: 118 KMMSP 122


>gi|150018076|ref|YP_001310330.1| peptidoglycan binding domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904541|gb|ABR35374.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 501

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R L LG+S  +V+ ++    R+  +  L P       +     +AVK FQ    L  +
Sbjct: 385 PGRELTLGSSGPAVRAIQGQLNRIARNYPLIPKIAEDGKYGPKTAAAVKTFQQIFTLPQT 444

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 445 GVVDYATWYRIS 456


>gi|118593899|ref|ZP_01551257.1| lipoprotein, putative [Stappia aggregata IAM 12614]
 gi|118433520|gb|EAV40189.1| lipoprotein, putative [Stappia aggregata IAM 12614]
          Length = 176

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 65/205 (31%), Gaps = 47/205 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRY--VLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
               +   ++N +  ++L+          ++V+ P   L     G   +R  V +GR   
Sbjct: 11  PIPAVDLSKINPVYYRQLVNYAAPEPAGTIIVDTPNRFLYLTMEGGQAMRYGVGIGREGF 70

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
                 +RI R    P W  P  +I +                                 
Sbjct: 71  A-WGGRARIARKAVWPKWTPPAEMIDR--------------------------------- 96

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGC 343
               PE   +     PG  N + +  +  +    +  Y +H T E           +SGC
Sbjct: 97  ---QPELEKYRNGMPPGLDNPLGARALYIFEGTRDTLYRLHGTSETWSIGK---AVSSGC 150

Query: 344 VRV--RNIIDLDVWLLKDTPTWSRY 366
           VR+  ++IIDL   +   TP   R 
Sbjct: 151 VRLLQQDIIDLYNRVPNGTPVVVRQ 175


>gi|148257495|ref|YP_001242080.1| hypothetical protein BBta_6254 [Bradyrhizobium sp. BTAi1]
 gi|146409668|gb|ABQ38174.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 405

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 55/185 (29%), Gaps = 48/185 (25%)

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL R +     K     ++V+ P   L  V      +R  V VGR    T     +I + 
Sbjct: 213 NLRRQEVDFVTKEPPGTIVVDTPNTYLYLVLGNGRAMRYGVRVGREG-FTWTGVQKITKK 271

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
              P W  P  +I++                                        P    
Sbjct: 272 TEWPDWYPPSEMIERQ---------------------------------------PYLPR 292

Query: 299 RQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
               G  N + +  +   S    Y +H T +P        F +SGC+ + N  + DL   
Sbjct: 293 FMAGGPGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGMLNDDVSDLFDR 347

Query: 356 LLKDT 360
           +   T
Sbjct: 348 VKVGT 352


>gi|75909734|ref|YP_324030.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75703459|gb|ABA23135.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 389

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 3/79 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
            L  G+    VQ L+ +L   G           +    + AV  FQ         G+ D 
Sbjct: 51  ALKPGSQGPDVQTLQMQLKQLGYYS--GITDGKYGDSTKQAVAKFQQAKVFSRVDGVADL 108

Query: 160 STLEAMNVPVDLRIRQLQV 178
           +T   +   +     +L V
Sbjct: 109 ATKRVLQTALIDNQNKLAV 127


>gi|87124371|ref|ZP_01080220.1| hypothetical protein RS9917_12195 [Synechococcus sp. RS9917]
 gi|86167943|gb|EAQ69201.1| hypothetical protein RS9917_12195 [Synechococcus sp. RS9917]
          Length = 157

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 52/182 (28%), Gaps = 52/182 (28%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
            R+  +    +            R V V++    L  +++G+   R  V +G  +  TP 
Sbjct: 7   KRLAVVAGAGVLATVAASPVRAERTVEVSLKERYLTILDDGEPVARFPVAIGAPESPTPP 66

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
                             SI +K+                  +  + GK +         
Sbjct: 67  GDY---------------SITRKEAKP---------------VYHKHGKVI--------- 87

Query: 291 PEPPNFIFRQDPGKINAMASTKI-EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                      PG  N +    +  F   +  Y +H T  P     +    + GC+R+ N
Sbjct: 88  ----------APGPKNPVGVRYMAYFTLGSGEYAIHGTAWPNWV-KLRAAVSLGCIRMLN 136

Query: 349 II 350
             
Sbjct: 137 SD 138


>gi|300023032|ref|YP_003755643.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524853|gb|ADJ23322.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 330

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 11/95 (11%)

Query: 287 DWN-----SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
           DW          P    R   G  N + +  I   +     +H T EP       R E+S
Sbjct: 198 DWYPPADMRKRKPELPTRMLGGIRNPLGAKAIYLGNT-LYRIHGTNEPKSIG---RAESS 253

Query: 342 GCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           GC R+   N++ L   +   T       ++  + +
Sbjct: 254 GCFRMLNENVLHLASLVRVGTEVTVVRSLDGKIAS 288


>gi|118587650|ref|ZP_01545060.1| hypothetical protein SIAM614_08753 [Stappia aggregata IAM 12614]
 gi|118439272|gb|EAV45903.1| hypothetical protein SIAM614_08753 [Stappia aggregata IAM 12614]
          Length = 245

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 51/162 (31%), Gaps = 44/162 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L         LR  + VG+         ++I     +P W  PR +I +     L +   
Sbjct: 111 LYWTLGNGKALRYGIGVGKAGFA-WSGEAKIRVKRPHPIWRPPREMIARK--PSLER--- 164

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN---T 321
           Y +                                  PG  N + +  ++ +  +     
Sbjct: 165 YWEKGY------------------------------PPGLKNPLGARAMDLWQGSTDTLY 194

Query: 322 YMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +H T +P          +SGC+R+  +++IDL   +   T 
Sbjct: 195 RIHGTNQPNSIGKS---VSSGCIRMWQQDVIDLFSRVPLQTK 233


>gi|85703784|ref|ZP_01034888.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
 gi|85672712|gb|EAQ27569.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
          Length = 188

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 298 FRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           + Q  G  N + S  +  F +  +TY  +H T +P          ++GC+R+   ++ DL
Sbjct: 119 YVQPGGSDNPLGSRALYLFQNGRDTYYRIHGTTQPSSIGQS---VSNGCIRMINEHVQDL 175

Query: 353 DVWLLKDTP 361
              +   T 
Sbjct: 176 YARVPIGTV 184


>gi|312794502|ref|YP_004027425.1| carboxyl-terminal protease [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181642|gb|ADQ41812.1| carboxyl-terminal protease [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 472

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +AVK FQ  + L  SG++
Sbjct: 380 ATKKFKKGDMDLEVLAAQQRLFYLGYLSSWTA---KMDDSTVAAVKKFQKDNKLYTSGVL 436

Query: 158 DSSTLEAMN 166
           D +T + +N
Sbjct: 437 DITTQKKLN 445


>gi|256752829|ref|ZP_05493670.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748279|gb|EEU61342.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 110

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  S  V+ L++ L  +G    +      F    ++AV   Q  + L P G+    T
Sbjct: 29  LKYGMRSPEVRHLQQNLNKAGYFVTANPTD-YFGPATKNAVMRLQKDYNLVPDGIYGPLT 87

Query: 162 LEAM 165
            +A+
Sbjct: 88  EKAL 91


>gi|84501683|ref|ZP_00999855.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
 gi|84390304|gb|EAQ02863.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
          Length = 190

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 56/216 (25%), Gaps = 51/216 (23%)

Query: 157 VDSSTLEA--MNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGK 212
                L A  +    +  +R+   +            +G   ++ +  + +L     +G 
Sbjct: 21  ATPHLLRAQDIAEAPEEGVRRNVSSFASQDWQDHFDTLGAAAIVCDTTSRALHFWSGDGS 80

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                   V R D  T   ++RI R    P W    S  ++                   
Sbjct: 81  DYRIYPTSVPRTDELTKRGYTRIVRKKVGPDWTPTPSQKER------------------- 121

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
                          W             PG  N + +  +         +H T +    
Sbjct: 122 -------------FGWEYM---------PPGPDNPLGTHAMYLDWP-AYLIHGTHDTRKI 158

Query: 333 NNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
               R  + GC+ + N       L   TP  ++  +
Sbjct: 159 G---RQSSDGCIGLFNPA--IEELFAITPIGTQVRV 189


>gi|307824556|ref|ZP_07654781.1| Peptidoglycan-binding domain 1 protein [Methylobacter tundripaludum
           SV96]
 gi|307734540|gb|EFO05392.1| Peptidoglycan-binding domain 1 protein [Methylobacter tundripaludum
           SV96]
          Length = 553

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +    +S SV  LR  L        +      +D  + + V  FQ +H L   
Sbjct: 467 PTPDGKVIRPRETSESVLWLRHLLNSIDRKTEAVEQPRFYDDRLVARVMDFQHQHQLPED 526

Query: 155 GMVDSSTL 162
           G V   T+
Sbjct: 527 GKVGEKTM 534


>gi|302532772|ref|ZP_07285114.1| predicted protein [Streptomyces sp. C]
 gi|302441667|gb|EFL13483.1| predicted protein [Streptomyces sp. C]
          Length = 137

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            G+S   V  L+  L I   LD + G+   +    E+AVK  Q R  L   G+    T
Sbjct: 60  PGSSGPQVAELQRALTICQGLD-TGGVDGVYGRKTEAAVKTVQARRSLKVDGIYGPDT 116


>gi|254501658|ref|ZP_05113809.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222437729|gb|EEE44408.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 219

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I ++     R             ++V      L         +R  V +GR D   
Sbjct: 56  PAVDISKIDPKFYRQVVDYNSSAQPGSIVVETHERFLYLAMGDGKAMRYGVGIGR-DGFA 114

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +RI R    P W  P  +I++     L +       N +                 
Sbjct: 115 WGGRARIARKKAWPTWTPPTDMIKRQ--PKLAK-----YKNGM----------------- 150

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       DPG  N + +  +     +++  Y +H T E           +SGCVR
Sbjct: 151 ------------DPGLDNPLGARALYIFEGNKDTLYRIHGTSETWSIGK---AASSGCVR 195

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   + + TP
Sbjct: 196 MLQQDVIDLYNRVPEGTP 213


>gi|229173406|ref|ZP_04300950.1| Spore cortex-lytic enzyme [Bacillus cereus MM3]
 gi|228610100|gb|EEK67378.1| Spore cortex-lytic enzyme [Bacillus cereus MM3]
          Length = 259

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 47/152 (30%), Gaps = 10/152 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQGKFGLPVDG 89

Query: 156 MVDSSTL----EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +  + T     +A         +    N        ++    +    N+P          
Sbjct: 90  LAGAKTKQMLAKATKYDKSTANKGTTTNKGNSGGTAKENKPSQNKGTNVPNG----YSQN 145

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            + L +  + G    +  +    +  ++ N  
Sbjct: 146 DIQLMANAVYGESRGEPYLGQVAVAAVILNRV 177


>gi|4455296|emb|CAB36831.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268071|emb|CAB78409.1| hypothetical protein [Arabidopsis thaliana]
          Length = 432

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 13/187 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+   G++ + 
Sbjct: 178 LKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVREDGVMTAE 237

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
            L+ + +  D+               +++++       +      E  E     L + V 
Sbjct: 238 LLQRLFMDEDV------ETDKDEASTMKKEVKTETTNYSSENLEHEYSEISLNLLNTPVK 291

Query: 221 VGRVDR---QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            G +       P++    N  +F     +P     K  +   + D +     N   +  +
Sbjct: 292 TGSLYWIFLLIPLIKEAGNGAVFTSVTQVPEK---KQSIVKDQSDREVDVTQNRVFLLGE 348

Query: 278 GKEVFVE 284
            +     
Sbjct: 349 NRWEDPS 355


>gi|15965344|ref|NP_385697.1| hypothetical protein SMc01200 [Sinorhizobium meliloti 1021]
 gi|307312718|ref|ZP_07592349.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15074524|emb|CAC46170.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306899443|gb|EFN30075.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 193

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 54/191 (28%), Gaps = 44/191 (23%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                  ++     R +           ++VN     L  V+ G   +R  + VG   R 
Sbjct: 31  SPQSARTRIDPRYRRQEVAYYGGESPGTIVVNTEERYLYYVQGGGSAVRYGIGVGEEGR- 89

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T    ++I R    P W    ++I++     L Q                          
Sbjct: 90  TLKGRAKIGRKAEWPSWTPTANMIRRK--PHLAQ-------------------------- 121

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                   +      G  N + +  +      +     +H T EP          +SGC+
Sbjct: 122 --------YAGGVSGGLHNPLGAAALYLYQGGNDTMFRLHGTNEPWTIGQ---AVSSGCI 170

Query: 345 RVRNIIDLDVW 355
           R+ N  D+   
Sbjct: 171 RLTN-DDIVDL 180


>gi|312621812|ref|YP_004023425.1| erfk/ybis/ycfs/ynhg family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202279|gb|ADQ45606.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 223

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++ V V  ++ RL   G    S  +   + + +E AV ++Q ++ L  +  +  
Sbjct: 154 RTIYPGDTGVDVMAVQRRLKELGFYSGS--IDGKYGSALEYAVNIYQKKNKLPVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 32/116 (27%), Gaps = 13/116 (11%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      V        ++      G+        +          +H T        
Sbjct: 60  SPGKTSTPTPVGTFKIISKDYW-----GEG--FGGRWMGLNVPYGKYGIHGTIYESYIGA 112

Query: 335 VVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
                + GC+R+  +++ +L +++   T       I    +    T     T V V
Sbjct: 113 ---HVSKGCIRMLNKDVKELFLYIPIGTTVVISEGIYGEFRNGFRTIYPGDTGVDV 165


>gi|307941423|ref|ZP_07656778.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
 gi|307775031|gb|EFO34237.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
          Length = 221

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 66/212 (31%), Gaps = 50/212 (23%)

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVN-----LMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             G  D +T  A        +  +Q        +R          +  ++V+     L  
Sbjct: 38  DDGTPDYATAYAPMRDGGFSLPAIQYQKFDPKFLRQSVFYPTWYEVGTIVVDPKRKFLYL 97

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           VE G   +R  + VGR         + I      P W  P+ +I+++    L +      
Sbjct: 98  VEPGGRAIRYGIGVGRAGFA-WNGEAVIKYKRKWPKWFPPKEMIERE--PRLAK------ 148

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MH 324
                               W           Q  G  N +    +  +  +++  Y +H
Sbjct: 149 --------------------WKDG--------QPGGPSNPIGVRGLYLWQGNKDTLYRIH 180

Query: 325 DTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            T  P          +SGC+R+  ++IIDL  
Sbjct: 181 STNAPNSIGTN---ASSGCIRMWHQDIIDLYE 209


>gi|295696768|ref|YP_003590006.1| carboxyl-terminal protease [Bacillus tusciae DSM 2912]
 gi|295412370|gb|ADG06862.1| carboxyl-terminal protease [Bacillus tusciae DSM 2912]
          Length = 473

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 94  WPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           W   P    RP+   ++  SV+ ++  L   G           F +    A++ FQ   G
Sbjct: 373 WQLPPLSITRPITPDSTDTSVKIMQNFLEALGYFP--GRTDGYFSSQTAEALRAFQHAKG 430

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L P+G++D  T  A+N  V  + +Q
Sbjct: 431 LSPTGILDQDTAAALNDAVLAKEKQ 455


>gi|238917193|ref|YP_002930710.1| hypothetical protein EUBELI_01266 [Eubacterium eligens ATCC 27750]
 gi|238872553|gb|ACR72263.1| Hypothetical protein EUBELI_01266 [Eubacterium eligens ATCC 27750]
          Length = 419

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++L+E+L + G+   S         +     +AVK FQ    L  S
Sbjct: 336 PGTNLDIGSSGQKVRQLQEQLNLIGEYYNSIPVLSTDGIYGEQTAAAVKEFQRIFNLPQS 395

Query: 155 GMVDSSTL 162
           G+ D  T 
Sbjct: 396 GITDFPTW 403


>gi|167766804|ref|ZP_02438857.1| hypothetical protein CLOSS21_01312 [Clostridium sp. SS2/1]
 gi|317498794|ref|ZP_07957082.1| peptidoglycan binding domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
 gi|167711558|gb|EDS22137.1| hypothetical protein CLOSS21_01312 [Clostridium sp. SS2/1]
 gi|316893929|gb|EFV16123.1| peptidoglycan binding domain-containing protein [Lachnospiraceae
           bacterium 5_1_63FAA]
          Length = 419

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-IISG 122
               PI            I   + I   G     P   L +G+S   V++++++L  I+ 
Sbjct: 303 QGYAPIEILRYYYGESMYINTAEQI--SGIPSSWPGYDLTIGSSGDKVRQIQQQLNRIAK 360

Query: 123 DLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           D    P+  +   +     +AV+ FQ   GL  +G+VD  T 
Sbjct: 361 DYPSLPTIAVDGVYGESTANAVRKFQNVFGLPQTGIVDYPTW 402


>gi|319645240|ref|ZP_07999473.1| SleB protein [Bacillus sp. BT1B_CT2]
 gi|317393049|gb|EFV73843.1| SleB protein [Bacillus sp. BT1B_CT2]
          Length = 305

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 15  AFSEQVIQRGATGDDVIELQARLQYNGYY--NGRIDGVYGWATYWAVRNFQNQFGLRDTD 72

Query: 155 GMVDSSTLE 163
           G+V   T  
Sbjct: 73  GLVGPKTKR 81


>gi|213026798|ref|ZP_03341245.1| hypothetical protein Salmonelentericaenterica_31870 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 161

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 7/80 (8%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + E          G  N M    I       T  H T     F   +R  + GC+R+RN
Sbjct: 10  YAKEGKTLPAMVPAGPDNPMGLYAIYIGRLYAT--HGTNA--NFGIGLR-VSQGCIRLRN 64

Query: 349 IIDLDVWLLKDTPTWSRYHI 368
             D   +L    P  +R  I
Sbjct: 65  --DDIKYLFDHVPVGTRVQI 82


>gi|222530301|ref|YP_002574183.1| carboxyl-terminal protease [Caldicellulosiruptor bescii DSM 6725]
 gi|222457148|gb|ACM61410.1| carboxyl-terminal protease [Caldicellulosiruptor bescii DSM 6725]
          Length = 472

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +AVK FQ  + L PSG++
Sbjct: 380 ATKKFKKGDMDLEVLAAQQRLFYLGYLSNWTA---KMDDSTVAAVKKFQKDNKLYPSGVL 436

Query: 158 DSSTLEAMN 166
           D +T + +N
Sbjct: 437 DITTQKKLN 445


>gi|119512604|ref|ZP_01631680.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
 gi|119462737|gb|EAW43698.1| Peptidoglycan-binding domain 1 [Nodularia spumigena CCY9414]
          Length = 394

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A  +   +    P +    L  G+    V+RL+ +L   G  +    +   +    ++A
Sbjct: 31  LASLEIAQASSTTPTIESI-LIPGSRGADVKRLQTKLKDLGYYNSE--IDGLYGPDTQNA 87

Query: 142 VKLFQMRHGL-DPSGMVDSSTLEAMNV 167
           V  FQ    L    G+ D +T  ++  
Sbjct: 88  VVQFQKFRNLGRTDGVADLTTRNSLQT 114


>gi|311068810|ref|YP_003973733.1| spore cortex-lytic enzyme [Bacillus atrophaeus 1942]
 gi|310869327|gb|ADP32802.1| spore cortex-lytic enzyme [Bacillus atrophaeus 1942]
          Length = 309

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + GL    
Sbjct: 29  AFSNQVIQRGATGDDVIELQARLQYNGYY--NGKIDGVYGWGTYWAVRNFQNQFGLKEID 86

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 87  GLVGAQT 93


>gi|114766731|ref|ZP_01445669.1| hypothetical protein 1100011001326_R2601_12126 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541050|gb|EAU44106.1| hypothetical protein R2601_12126 [Roseovarius sp. HTCC2601]
          Length = 250

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 20/114 (17%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP------------GKINAMASTK 312
           YL           G+     + DW    P   + R+DP            G  N + +  
Sbjct: 103 YLIAVGAQGYGFSGEATIPFQRDWPYWTPTANMLRRDPEEYGPVRNGLPGGLENPLGARA 162

Query: 313 IEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +      R+  Y +H TP P    +     +SGC+R+  +++I L   +   T 
Sbjct: 163 LYLYKNGRDTLYRIHGTPSPWTVGHGT---SSGCIRMFNQDVIHLAEQVENGTK 213


>gi|56695353|ref|YP_165701.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
 gi|56677090|gb|AAV93756.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Ruegeria
           pomeroyi DSS-3]
          Length = 185

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 52/199 (26%)

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
               ++ +++      + L+  +           +  L  V   +  +R    VG+   +
Sbjct: 30  DPTPQVVRIKKQFEPGRLLILPR-----------SFYLYYVTEEREAIRYGCGVGKAGLE 78

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
                + I+     P W     +I++D      +      DNN                 
Sbjct: 79  -FTGTATIDVKKEWPTWRPTPEMIERDP-----RTYAKFVDNNY---------------- 116

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCV 344
                       Q  G  N + +  +  F +  +TY  +H T +P    +     ++GC+
Sbjct: 117 -----------IQPGGPENPLGARALYLFQNGVDTYFRIHGTTQPQTIGH---AASNGCI 162

Query: 345 RV--RNIIDLDVWLLKDTP 361
           R+   ++IDL   +   T 
Sbjct: 163 RMLNEHVIDLYNRVPLGTV 181


>gi|160915943|ref|ZP_02078151.1| hypothetical protein EUBDOL_01967 [Eubacterium dolichum DSM 3991]
 gi|158432419|gb|EDP10708.1| hypothetical protein EUBDOL_01967 [Eubacterium dolichum DSM 3991]
          Length = 641

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHG 150
           P  P  PL LG+    V  L+  L  I            ++  F+   +SAV+ FQ +  
Sbjct: 298 PSYPGTPLQLGSVGKDVAMLQAFLNAIAINYPAIRPIFPVNGEFETATQSAVRTFQRQFN 357

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+V  +T   ++
Sbjct: 358 LTVDGIVGRTTWYRIS 373



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIIS--GDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  PL LG S  +V+ ++  +        D PS  +   F A   +A++ FQ    L   
Sbjct: 491 PGIPLQLGTSGDAVEAVQNAINKLAKQYTDIPSVNVDGIFGAATRNAIRNFQSLFDLTAD 550

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           G+V   T E +         QLQ N      L       ++ L  I    
Sbjct: 551 GIVGVKTWELLF----SIAAQLQANTADTAIL-------QHQLNMIAKYY 589



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQM 147
            G W +   R L  G+ SV  Q ++  L  I     + P   +   F A   +A+  FQ 
Sbjct: 396 SGVWQQ---RVLRQGDRSVETQLMQYYLSSIRLFYPEIPEVSIDGRFGAGTYNAILAFQK 452

Query: 148 RHGLDPSGMVDSSTLEAM 165
           R GL   G+V  +T + +
Sbjct: 453 RFGLTADGLVGQATWDRI 470


>gi|157693492|ref|YP_001487954.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
 gi|157682250|gb|ABV63394.1| M15C subfamily peptidase [Bacillus pumilus SAFR-032]
          Length = 274

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 7/78 (8%)

Query: 97  LPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRH 149
           LP   L           V  +++ L            + G+   +     +AVK FQ+ +
Sbjct: 193 LPSGILKITKPLTKGSQVTAVQKALSSLYFYPDKGAKNNGIDGYYGPKTANAVKRFQLMN 252

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL   G+    T   M  
Sbjct: 253 GLAADGIYGPKTRNKMEQ 270


>gi|91977919|ref|YP_570578.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91684375|gb|ABE40677.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 410

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 61/198 (30%), Gaps = 48/198 (24%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   +  QL  NL R +   + K     ++V+     L  V      +R  V VGR D
Sbjct: 203 EQPEADQSFQLPPNLRRQEVAFQTKEPAGTIVVDTSHTYLYYVLGNGRAMRYGVRVGR-D 261

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             T     +++R    P W  P  +I++                                
Sbjct: 262 GFTWNGVQKVSRKAEWPDWHPPAEMIERQ------------------------------- 290

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                   P        G  N M +  +   S    Y +H T +P        F +SGC+
Sbjct: 291 --------PYLPRFMAGGPGNPMGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCI 337

Query: 345 RV--RNIIDLDVWLLKDT 360
            +   ++ DL   +   T
Sbjct: 338 GMLNDDVSDLFERVKVGT 355


>gi|308126559|ref|ZP_07663817.1| type II secretory pathway, component ExeA [Vibrio parahaemolyticus
           AQ4037]
 gi|308109785|gb|EFO47325.1| type II secretory pathway, component ExeA [Vibrio parahaemolyticus
           AQ4037]
          Length = 274

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L + L  +  +  S   +  FD  ++  V+LFQ   G+  
Sbjct: 186 WQAPLKETLRLDMEGPAIEVLDQLLAKA--VSESPLETSIFDGALKERVELFQRWQGIGV 243

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TLE +   V      L 
Sbjct: 244 DGIAGHRTLERLQQSVQPNAPTLA 267


>gi|139439483|ref|ZP_01772915.1| Hypothetical protein COLAER_01941 [Collinsella aerofaciens ATCC
           25986]
 gi|133775036|gb|EBA38856.1| Hypothetical protein COLAER_01941 [Collinsella aerofaciens ATCC
           25986]
          Length = 301

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 18/150 (12%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA--QTEKAIAFYQD 87
           PI   +    + +    ++   +    A V    D      +++ ++  + +  +A    
Sbjct: 3   PITTGMQGAAVEDVQSRLLQLGYTIDAAEVT---DKYFGATTEQAVSTFRLDSGLAAGHA 59

Query: 88  ILSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
            +    W  L      LG+              VQ L+  L + G           F  +
Sbjct: 60  -VDIPCWSALVDASYKLGDRTLYLRMPNFHGADVQALQRALNVLGF--ACGEDDGYFGPH 116

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            E+A++ FQ   GL   GM    T   +N 
Sbjct: 117 TEAALQQFQENVGLFADGMAFQDTYAYINR 146


>gi|225848549|ref|YP_002728712.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643366|gb|ACN98416.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 249

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 51/170 (30%), Gaps = 45/170 (26%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEA---VENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           +KK L +   L  V ++     L     +E  K  +   V +G  D  TP    +I    
Sbjct: 102 LKKQLPEDFKLNTVYISTQDHRLYYPIELEGKKYVITFPVGLGGEDFPTPKGEFKITERR 161

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP WV+P S                                            PN    
Sbjct: 162 VNPDWVVPPS---------------------------------------AKINNPNLPPV 182

Query: 300 QDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              G   N + +  +   + ++  +H T +       +   + GC+ +RN
Sbjct: 183 VPYGSPENGLGTRALRL-NGSSYMIHGTSKRSEKGVGM-NISYGCIVLRN 230


>gi|169335908|ref|ZP_02863101.1| hypothetical protein ANASTE_02343 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258646|gb|EDS72612.1| hypothetical protein ANASTE_02343 [Anaerofustis stercorihominis DSM
           17244]
          Length = 279

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G+    ++  +E LI +G L  +   +  FD+   +AVK +Q + GL  +G +D+ 
Sbjct: 213 TYKQGHKGDVIKDYQEILIRTGYLKGTA--NGTFDSKTTAAVKSYQTKKGLSVTGNLDTK 270

Query: 161 TLEAMN 166
           T+EA++
Sbjct: 271 TMEALD 276



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +    G S   +   +  L     L      +  FD+    AVK +Q   G+  +  +D
Sbjct: 75  SKTFSEGESGDEILSYKLILYYLDYLS--DTPNNTFDSTTTKAVKEYQTSRGIKETSKLD 132

Query: 159 SSTLE 163
            +T++
Sbjct: 133 KTTMQ 137



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 60/187 (32%), Gaps = 34/187 (18%)

Query: 12  YCFFVYLILPMGLSLVEKPIH---ASVLDEIIN-------ESYHSIVNDRFDNFLARVDM 61
           +C   YL     ++L  K ++   A  L + +        +     V+  +    +  + 
Sbjct: 24  FCSEKYLNESYSVNLSSKTLYYAFAGNLSDYLEGKIADDDDLNLDSVDKDYSKTFSEGES 83

Query: 62  ------------GIDSDIPIISKETIAQTEKAIAFY---QDILSRGGWPELPIRPL---- 102
                        +D      +    + T KA+  Y   + I       +  ++ L    
Sbjct: 84  GDEILSYKLILYYLDYLSDTPNNTFDSTTTKAVKEYQTSRGIKETSKLDKTTMQTLDNEV 143

Query: 103 ---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                G SS  +++    L   G L      +  + A  + A + +Q    L  +G +  
Sbjct: 144 VDYKTGKSSEDIKKYNYILYYLGYLTKEP--NSTYTAETKVACENYQKAKSLPVTGTMTP 201

Query: 160 STLEAMN 166
            T  +++
Sbjct: 202 QTRRSLD 208


>gi|295696385|ref|YP_003589623.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
 gi|295411987|gb|ADG06479.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
          Length = 241

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W  +  + L  G     V  L++RL   G       +   F      +V+ FQ  HGL  
Sbjct: 32  W-AMSDKTLMKGGRGEDVYELQDRLKFLGLY--RGAIDGVFGWNTYWSVRSFQSGHGLSA 88

Query: 154 SGMVDSSTLEAM 165
           +G VD  T  A+
Sbjct: 89  TGQVDDRTRRAL 100


>gi|238926893|ref|ZP_04658653.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
 gi|238885425|gb|EEQ49063.1| NLP/P60 protein [Selenomonas flueggei ATCC 43531]
          Length = 251

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L+  L  +G   P K +   F+     AV +FQ  + +  +G+V+++
Sbjct: 33  TLCEGSHGHDVLVLQRALQNAGY--PVKNIDGIFNKETGHAVAMFQRDNKIKITGVVNNA 90

Query: 161 TLEAMNVPVDLR 172
           T  A+      R
Sbjct: 91  TWRALRNAPAKR 102


>gi|38638635|ref|NP_944336.1| gp28 [Burkholderia phage Bcep1]
 gi|34486017|gb|AAQ73374.1| gp28 [Burkholderia phage Bcep1]
          Length = 255

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQARLGL--------AQSGQFDASVATALRQWQEAHGMTPDGVYG 53

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIK 184
           S T   M       +  +     R++
Sbjct: 54  SQTNAVMT---ARALSDIADAAARLR 76


>gi|266625139|ref|ZP_06118074.1| putative peptidoglycan binding domain protein [Clostridium
           hathewayi DSM 13479]
 gi|288862959|gb|EFC95257.1| putative peptidoglycan binding domain protein [Clostridium
           hathewayi DSM 13479]
          Length = 857

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 27/198 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG++    + L+      G       +   F     +A   FQ  HGL+  G+V 
Sbjct: 394 SSTLKLGSNGSLTRYLQRLFNELGY---QIPIDGIFSQETHNAALSFQTTHGLEADGIVG 450

Query: 159 SSTLE------AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
             T         ++VP     + L V    +     +         NI         N  
Sbjct: 451 GGTWRKLFEVYRVDVPGTGVEKLLNVVKHELAWGFAEDNAN-----NITPYGQWYEMNRS 505

Query: 213 VGLRSTVIV-----GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD---MMALLRQDPQ 264
                 V       G +D   P      + +     W   R    K     +   + D  
Sbjct: 506 PWCAMFVSYCAYQAGVLDTLVPKFAWCPSGMT----WYKNRQKYHKRNSGYIPK-KGDVI 560

Query: 265 YLKDNNIHMIDEKGKEVF 282
           +  ++ +  +   G  V 
Sbjct: 561 FFYNDELGRVAHTGIVVD 578



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++ + V+ L++ L I         +  AF    ++AV+ FQ   GL   G+V + T
Sbjct: 3   LKNGDTGIQVKYLQQGLKIM--CCNPGSIDSAFGPGTQAAVEKFQEEWGLTVDGIVGNDT 60

Query: 162 LE 163
             
Sbjct: 61  WN 62



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 2/96 (2%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           A    +      G  +  + PL +G+    V  L+  L I         L   F +    
Sbjct: 114 AATRARLFNEDQGGGDESMLPLSIGDRGDYVLYLQYGLRIL--CCSPGALDGVFGSGTAE 171

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           AVK FQ ++G+  +G+ D++T   +   +     +L
Sbjct: 172 AVKKFQAKYGITDNGIADTTTWNTLKGQITDIQSRL 207



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 5/78 (6%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +  G    LP   L  G+    V   +  L IS       G    +    +SAV  ++ R
Sbjct: 256 VEDGATDALP---LKTGSRGPRVLYFQYALRIS--CINPNGTDGVYGPGTKSAVDRYKTR 310

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   GMVD+ T E M 
Sbjct: 311 KGLTADGMVDTVTWEKMR 328



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 16/107 (14%)

Query: 69  IISKETIAQTEKAIAFY----QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           +    T    +K  A Y      I     W  L             +  ++ RL+     
Sbjct: 164 VFGSGTAEAVKKFQAKYGITDNGIADTTTWNTLKG----------QITDIQSRLLERNY- 212

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                +     + +   +K +Q  + L   G V  +T E +   V+ 
Sbjct: 213 -SIAIVDGLATSALVETIKKYQEANWLTADGQVGPATYELLFSDVED 258



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 33/87 (37%), Gaps = 10/87 (11%)

Query: 78  TEKAIAFYQ---DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           T+ A+  Y+    + + G    +    +        ++ L+  L+  G       +    
Sbjct: 300 TKSAVDRYKTRKGLTADGMVDTVTWEKMR-----DEIRPLQTALVNRGY--DVGFVDGIA 352

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSST 161
              V ++V  FQ  H L   GM+ ++T
Sbjct: 353 TEKVYNSVLQFQTDHNLVADGMIGNAT 379


>gi|83955854|ref|ZP_00964396.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
 gi|83839859|gb|EAP79036.1| ErfK/YbiS/YcfS/YnhG family protein [Sulfitobacter sp. NAS-14.1]
          Length = 162

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 6/84 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MH 324
           L       +  K  E             P+      PG  N + +  +        Y +H
Sbjct: 65  LTRRGYTTVTFKDPEPDWTPTPSMRERDPSLPAYMPPGPDNPLGARALHLS--WTYYRIH 122

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  +SGC+ + N
Sbjct: 123 GTHDTRKIG---RRSSSGCIGLYN 143


>gi|218674379|ref|ZP_03524048.1| hypothetical protein RetlG_24247 [Rhizobium etli GR56]
          Length = 268

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 71/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 75  QFHQTYGLPVTNPVHAAMYGELRDEDFTLPSIPVSRVQPQFLRQEVDYQTTERPGTVVVD 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         +      P W  P  ++ +      
Sbjct: 135 TKARFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVVQWKQKWPRWTPPAEMVSRQ----- 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
                                   +   +++          +PG  N + +  +      
Sbjct: 189 -----------------------PDVRAFSAENGGM-----NPGLQNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 221 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPAKAE 264


>gi|162456928|ref|YP_001619295.1| hypothetical protein sce8645 [Sorangium cellulosum 'So ce 56']
 gi|161167510|emb|CAN98815.1| hypothetical protein sce8645 [Sorangium cellulosum 'So ce 56']
          Length = 483

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+E L   GD   +     +F     +A+   Q   GL  +G+VD++T+ A
Sbjct: 33  GAHGDGVRALQEALGTLGD---AMKADGSFGPKTHAAIVALQGAEGLPQTGIVDAATIAA 89

Query: 165 MNVPVDLRIRQ-LQVNLMRIKKLLEQ 189
           ++  +  R RQ L+  + R   L  +
Sbjct: 90  LDRRLGARRRQPLEEAMARAAGLSPE 115


>gi|327188449|gb|EGE55663.1| hypothetical protein RHECNPAF_890076 [Rhizobium etli CNPAF512]
          Length = 204

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 47/176 (26%), Gaps = 46/176 (26%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              ++G   +++     +L             + VGR  +Q     +R+     +P W  
Sbjct: 67  PSTRIGRGAIVIATREHTLVYTTASGEQFAYPIAVGREGKQ-WYGSTRVVSKRMHPEWRP 125

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             S+ QK                                        P        G  N
Sbjct: 126 TASMRQK---------------------------------------NPRLPAVVKAGPAN 146

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            + +  I         +H T +P          +SGC R+   ++ +L   +   T
Sbjct: 147 PLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYREDVEELYDMVQPGT 198


>gi|325677685|ref|ZP_08157337.1| putative spore cortex-lytic enzyme [Ruminococcus albus 8]
 gi|324110653|gb|EGC04817.1| putative spore cortex-lytic enzyme [Ruminococcus albus 8]
          Length = 225

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 3/93 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G+    V+ ++E+L   G  + +      +     +AV  FQ + G+  +G     TL+
Sbjct: 39  IGSYGTEVRAIQEKLKERGLFNSNVT--GYYGEITRNAVLAFQKQQGISQTGTAGPVTLK 96

Query: 164 AMNVPVDLRIRQLQVNLMRI-KKLLEQKMGLRY 195
           A+ + +       + N+  + + +  +  G  Y
Sbjct: 97  ALGISIGSVPAATEANVNLLARIISAEARGEPY 129


>gi|289643979|ref|ZP_06476080.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506207|gb|EFD27205.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
          Length = 262

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            V R+++RL   G    S  +   F       VK +Q +HGL   G+V + T   +
Sbjct: 206 EVARVQQRLTDLGY---SLAVDGIFGPRTTRVVKDYQRQHGLVADGIVGARTYAQL 258


>gi|240139748|ref|YP_002964225.1| hypothetical protein MexAM1_META1p3201 [Methylobacterium extorquens
           AM1]
 gi|240009722|gb|ACS40948.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens AM1]
          Length = 211

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 53/178 (29%), Gaps = 48/178 (26%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
                   LV      L  V+ G   +R  V VGR         + I+R +  P W    
Sbjct: 73  ATREPVGTLVETAERRLYLVQPGGKAMRYPVSVGRAG-LAWTGRAEIDRKLEWPDWNPAP 131

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            +I +                                        P+   R + G  + +
Sbjct: 132 DMIGRH---------------------------------------PDLPSRLEGGPFSPI 152

Query: 309 ASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +  +      ++  Y +H T EP          +SGC+R+   +++DL   +   T 
Sbjct: 153 GARALYLAQNRKDTLYRIHGTNEPETIGQ---AVSSGCIRMLNEDVMDLYERVPVGTK 207


>gi|121533679|ref|ZP_01665506.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307670|gb|EAX48585.1| 3D domain protein [Thermosinus carboxydivorans Nor1]
          Length = 210

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L  R L +G +   V+ L+ RL           +   F    + AVK+F+  + L+  G
Sbjct: 29  ALGERVLQVGATGDDVRELQIRLNELDFYA--GTVDGVFGPQTQHAVKMFEKANNLESDG 86

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           + D   L  M   V    R L     R K +L+
Sbjct: 87  IADQDLLTFMQKKVPKVSRNLP---ERYKTVLD 116


>gi|254466637|ref|ZP_05080048.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium Y4I]
 gi|206687545|gb|EDZ48027.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium Y4I]
          Length = 211

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 298 FRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           + Q  G  N + +  +  F +  +TY  +H T +P    +     ++GC+R+   +++DL
Sbjct: 142 YIQPGGPDNPLGARALYLFQNGVDTYFRIHGTNQPQTIGHS---VSNGCIRMLNEHVMDL 198

Query: 353 DVWLLKDTP 361
              +   T 
Sbjct: 199 YERVPLGTV 207


>gi|187934789|ref|YP_001887348.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum B
           str. Eklund 17B]
 gi|187722942|gb|ACD24163.1| spore cortex-lytic enzyme, pre-pro-form [Clostridium botulinum B
           str. Eklund 17B]
          Length = 792

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 12/97 (12%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  PL L + + +V+ ++++L         +      +  FD   E AVK+FQ    L  
Sbjct: 324 PGTPLRLNDENNNVKVIQKQLNRISQNFPAIPKIPYENGKFDKSTEDAVKVFQKVFNLTQ 383

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
            G+V  +T          RI  + V + R+ +L ++ 
Sbjct: 384 DGIVGRATWY--------RISSIYVGVKRLAELDQEP 412



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 13/123 (10%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L  G+    V+ ++  L +       PS      F    + AV  FQ   GL P G
Sbjct: 426 PGYLLKYGSRGEKVKEVQSYLSVISKSYNIPSIKADGIFGQMTKDAVIAFQRLFGLAPDG 485

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
           ++  +T            +   V    IK   +Q +   +     P   L     G+   
Sbjct: 486 IIGINTWN----------KIYYVYKDLIKGTGQQDLNEDFDGKY-PGYLLSYGSRGEKVR 534

Query: 216 RST 218
              
Sbjct: 535 EMQ 537



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG+    V   ++    L  +  L      +  FD   E A+K  Q + GL  +
Sbjct: 704 PGFDLELGDRDGYVTVFQKYINVLAKNNYLSNQIIENGVFDKRTEKAIKELQEKFGLKVT 763

Query: 155 GMVDSSTLE 163
           G+VD  T +
Sbjct: 764 GIVDKLTWD 772



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 85  YQDILSRGGWPEL--------PIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAF 134
           Y+D++   G  +L        P   L  G+    V+ ++  L +       PS      F
Sbjct: 499 YKDLIKGTGQQDLNEDFDGKYPGYLLSYGSRGEKVREMQTYLSVISKSYNIPSINADGIF 558

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +AV  FQ   GL   G+V  +T   +
Sbjct: 559 GEMTRNAVLSFQRLFGLAQDGVVGLNTWNKI 589



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L        V+ L+  L  IS        +     F    +SAV  FQ + GL+  
Sbjct: 611 PGYVLKENLYGDDVRWLQTYLNAISEFYKEIPKIKVDGMFKKKTKSAVMEFQKKFGLNVD 670

Query: 155 GMVDSSTLEAM 165
           G +  +  + +
Sbjct: 671 GKIGVNDWKKL 681


>gi|153954823|ref|YP_001395588.1| hypothetical protein CKL_2205 [Clostridium kluyveri DSM 555]
 gi|146347681|gb|EDK34217.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 126

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                  +  +   ++    +H T  P    +   + ++GC+R+ N  +I+L   +   T
Sbjct: 66  NPGGPYGARWMGLSAK-GIGIHGTNNPHSIGS---YVSNGCIRMYNKDVIELFNIVPVGT 121

Query: 361 P 361
            
Sbjct: 122 V 122


>gi|85703691|ref|ZP_01034795.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
 gi|85672619|gb|EAQ27476.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. 217]
          Length = 156

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 27/97 (27%), Gaps = 6/97 (6%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L       +  K                P+      PG  N + +  +         +H 
Sbjct: 59  LTRRGYTEVVRKRVGPDWTPTQSMRERDPSLPAYMPPGPGNPLGTHALYLSWP-AYLVHG 117

Query: 326 TPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDT 360
           T +        R  +SGC+ + N    +L   +   T
Sbjct: 118 THDTRKIG---RQSSSGCIGLYNPHIEELFAKVAVGT 151


>gi|295314760|gb|ADF97530.1| PlyM5 [uncultured phage]
          Length = 284

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++     +    L  G++  +V+ L+  L  +G L     +   F    E+AVK FQ  
Sbjct: 205 AAKPTPSTVKRDYLLDGDTGAAVKTLQSELKQAGFL---LSVDGIFGKGTETAVKAFQRG 261

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+  + +   +N 
Sbjct: 262 NGLVVDGVFGTGSQAKLNA 280


>gi|260436504|ref|ZP_05790474.1| protein ErfK/srfK [Synechococcus sp. WH 8109]
 gi|260414378|gb|EEX07674.1| protein ErfK/srfK [Synechococcus sp. WH 8109]
          Length = 95

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 21/68 (30%)

Query: 299 RQDPGKINAMASTKIEFYSRNNT------------------YMHDTPEPILFNNVVRFET 340
            +D G  N + S  I F+                         H TP         R  +
Sbjct: 11  VEDQGANNPLGSHWIAFHRDCCGRDAHDGDAWITIKGCTTTGFHGTPHRWTVG---RAVS 67

Query: 341 SGCVRVRN 348
            GCVR+ N
Sbjct: 68  HGCVRLYN 75


>gi|219855282|ref|YP_002472404.1| hypothetical protein CKR_1939 [Clostridium kluyveri NBRC 12016]
 gi|219569006|dbj|BAH06990.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 130

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                  +  +   ++    +H T  P    +   + ++GC+R+ N  +I+L   +   T
Sbjct: 70  NPGGPYGARWMGLSAK-GIGIHGTNNPHSIGS---YVSNGCIRMYNKDVIELFNIVPVGT 125

Query: 361 P 361
            
Sbjct: 126 V 126


>gi|302794749|ref|XP_002979138.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
 gi|300152906|gb|EFJ19546.1| hypothetical protein SELMODRAFT_110370 [Selaginella moellendorffii]
          Length = 361

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMR 148
            G W +L  +   H G+S  ++Q+L+   +  G L  S   +   FD  +E+AV+L+Q  
Sbjct: 37  AGAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQN 96

Query: 149 HGLDPSGMVDSSTLEAMNVP 168
             L  +G +DS+T+  +  P
Sbjct: 97  FHLPVTGNLDSATIAQLVTP 116


>gi|302813804|ref|XP_002988587.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
 gi|300143694|gb|EFJ10383.1| hypothetical protein SELMODRAFT_128150 [Selaginella moellendorffii]
          Length = 361

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)

Query: 91  RGGWPEL-PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMR 148
            G W +L  +   H G+S  ++Q+L+   +  G L  S   +   FD  +E+AV+L+Q  
Sbjct: 37  AGAWADLLSLVDAHKGDSKPAIQKLKSYFVDFGYLGNSTLTADLSFDDALEAAVRLYQQN 96

Query: 149 HGLDPSGMVDSSTLEAMNVP 168
             L  +G +DS+T+  +  P
Sbjct: 97  FRLPVTGNLDSATIAQLVTP 116


>gi|290955225|ref|YP_003486407.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
 gi|260644751|emb|CBG67836.1| muramoyl-pentapeptide carboxypeptidase [Streptomyces scabiei 87.22]
          Length = 249

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPS---KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G+S   V  L+ R+       PS    G+   F     +AV+ FQ  +GL   G+   +T
Sbjct: 47  GDSGADVTELQVRVAGWAADSPSHSRVGVDGDFGPGTAAAVRRFQAAYGLTADGVAGPNT 106

Query: 162 LEAMNV 167
              +N 
Sbjct: 107 QAKLNA 112


>gi|160879346|ref|YP_001558314.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428012|gb|ABX41575.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 667

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S + V+ L++RL   G       +   +    E+ +K FQ  + L  +G+V+ ST E +
Sbjct: 600 MSGIDVKNLQQRLNRLGY---KVTVDGTYGKNTETVIKKFQKDNKLKETGVVNYSTWEKL 656


>gi|89056518|ref|YP_511969.1| twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
 gi|88866067|gb|ABD56944.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
          Length = 206

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 75/238 (31%), Gaps = 53/238 (22%)

Query: 129 GLSVAFDAYVESAVKLF-QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
             +  F   +  A   F Q   G+     +D        VP       L    M  +   
Sbjct: 10  TTTTLFSGAL--AAPAFAQDSVGIGIDEAIDQ------PVPAGANPWGLHERFMPTRVAR 61

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
              + +  + V+  +  L  +E G   +R  V VGR     P  + RI R+   P W   
Sbjct: 62  NGGLNVGDIHVDPTSRFLYHIEAGGTAMRYGVAVGRAGLYQP-GNFRIQRVAEWPSWTPT 120

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            ++I+++                  +  +    V                     G  N 
Sbjct: 121 ANMIRREP----------------EIYAQYAGGV-------------------PGGPDNP 145

Query: 308 MASTKIEFY-SRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           + +  +  Y    +TY  +H TP+P          +SGCVR+ N  +I L   +    
Sbjct: 146 LGARALYLYAGGRDTYLRIHGTPQPWSIGTS---ASSGCVRLVNDHVIQLAQNVRSGN 200


>gi|257069799|ref|YP_003156054.1| putative peptidoglycan-binding domain-containing protein
           [Brachybacterium faecium DSM 4810]
 gi|256560617|gb|ACU86464.1| putative peptidoglycan-binding domain-containing protein
           [Brachybacterium faecium DSM 4810]
          Length = 254

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 2/73 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+    V+ L++ L           +  +F    + AV   Q   GL   G+V   T 
Sbjct: 60  RRGDRGAGVKSLQQDLADLRYWL--GAVDGSFGHNTQQAVYALQKAAGLAKDGVVGPKTY 117

Query: 163 EAMNVPVDLRIRQ 175
            A++  V  + R 
Sbjct: 118 SALSRGVQPKRRI 130


>gi|146342930|ref|YP_001207978.1| ErfK/YbiS/YcfS/YnhG family protein [Bradyrhizobium sp. ORS278]
 gi|146195736|emb|CAL79763.1| putative ErfK/YbiS/YcfS/YnhG protein family [Bradyrhizobium sp.
           ORS278]
          Length = 267

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 46/153 (30%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++ P   L  V+     LR  + VGR    T      I+     P W  P  ++ +  
Sbjct: 140 IVIDTPNKFLYLVQGEGRALRYGIGVGRPG-FTWSGVKTISAKREWPDWTPPAEMLARR- 197

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+     + G  N + +  +  
Sbjct: 198 --------------------------------------PDLPRHMEGGPQNPLGARAMYL 219

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+RN
Sbjct: 220 GSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 248


>gi|110346926|ref|YP_665744.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110283037|gb|ABG61097.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 202

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 24/112 (21%)

Query: 264 QYLKDNNIHM----IDEKGKEVFVEEVDWNSPEPPNFIFRQDP------------GKINA 307
            + +   I +    +   G  +   +  W S  P + + R+DP            G  N 
Sbjct: 83  GFARRYGIGVGKAGLAFSGSAIIGRKAKWPSWRPTDNMIRRDPKKYARYAGGVPGGPNNP 142

Query: 308 MASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           + S  +      R+  Y +H T EP          ++GCVR+   ++ DL  
Sbjct: 143 LGSRALYLYRNGRDTLYRIHGTTEPWTIGK---AVSNGCVRMVNEHVEDLYE 191


>gi|160879581|ref|YP_001558549.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428247|gb|ABX41810.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 363

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V  +R  L   G    S G    +DA + + VK FQ   GL   G     TL A
Sbjct: 115 GDTGTPVTTIRTLLNNKGYTCASTGS---YDADLVNVVKSFQTAMGLSSDGSAGQGTLAA 171

Query: 165 MNVPVDL 171
           +   +  
Sbjct: 172 LEDTISD 178



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  ++ +++ L + G           F + +  AVK FQ  +GL   G+   S+L  +  
Sbjct: 29  SDELKAVQKALYLYGYCPGGAP-DGYFGSGMLGAVKGFQNENGLLNDGLFGQSSLTKLEA 87


>gi|209546936|ref|YP_002278854.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538180|gb|ACI58114.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 203

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 6/73 (8%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--R 347
             + P       PG  N + +  +         +H T +P          +SGC R+   
Sbjct: 129 RLKNPRLPTVVKPGPNNPLGTRAMYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYRE 184

Query: 348 NIIDLDVWLLKDT 360
           ++ +L   +   T
Sbjct: 185 DVEELYDMVQPGT 197


>gi|312143788|ref|YP_003995234.1| cell wall hydrolase SleB [Halanaerobium sp. 'sapolanicus']
 gi|311904439|gb|ADQ14880.1| cell wall hydrolase SleB [Halanaerobium sp. 'sapolanicus']
          Length = 229

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  GN  + V  L+++L      + S  L   +      AVK FQ  + L   G+  
Sbjct: 36  SRALSRGNEGLDVAVLQQKLKQLNYYNSS--LDGLYGDATVEAVKGFQRDNDLKADGVFA 93

Query: 159 SS 160
            +
Sbjct: 94  EA 95


>gi|227822139|ref|YP_002826110.1| putative ErfK/YbiS/YhnG oxidoreductase [Sinorhizobium fredii
           NGR234]
 gi|227341139|gb|ACP25357.1| putative ErfK/YbiS/YhnG oxidoreductase [Sinorhizobium fredii
           NGR234]
          Length = 194

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 56/197 (28%), Gaps = 44/197 (22%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +            ++     R +           ++VN     L  V+ G   +R  + V
Sbjct: 26  IGRTIESPIASRTRIDPRYRRQEVAYHGGEAPGTIVVNTEERYLYYVQGGGWAVRYGIGV 85

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G   R T    + I R    P W    S++++     LRQ                    
Sbjct: 86  GEEGR-TLKGKATIGRKAEWPSWTPTESMMRRK--PHLRQ-------------------- 122

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRF 338
                         +      G  N + ++ +      +     +H T EP         
Sbjct: 123 --------------YAGGVSGGLHNPLGASALYLYRGGNDTMFRLHGTNEPWTIGQ---A 165

Query: 339 ETSGCVRVRNIIDLDVW 355
            +SGC+R+ N  D+   
Sbjct: 166 VSSGCIRLTN-DDIVDL 181


>gi|163735642|ref|ZP_02143073.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161391070|gb|EDQ15408.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 149

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 55/152 (36%), Gaps = 43/152 (28%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+  A  L  +E+G   +R  V + R +   P     I R +  P+W    S+I+     
Sbjct: 14  VDAVARYLYHIEDGGTAMRYGVAIARGNLYEP-GTYTIKRKVEWPHWTPTASMIE----- 67

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-- 315
              ++P+Y         D                        Q+PG  N + S  +    
Sbjct: 68  ---RNPEYA-----QWADG-----------------------QEPGPSNPLGSRALYLFV 96

Query: 316 YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            +R+    +H +PE        R  +SGCVR+
Sbjct: 97  GNRDTYLRIHGSPEARSIG--GRA-SSGCVRM 125


>gi|90425763|ref|YP_534133.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90107777|gb|ABD89814.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 225

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 54/190 (28%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
           +  +  PV    R+  V+  R +           ++V+     L  V++G   +R  + V
Sbjct: 45  VSYVKTPVAEPFRRAIVDYHRKETPGS-------IVVDSDNHYLYLVQDGGKAIRYGITV 97

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
           G          ++I  +   P W   +S I +  +                         
Sbjct: 98  GEEA-MAWSGIAKIGNMAEWPPWHPTQSEISRLGVPKF---------------------- 134

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTY-MHDTPEPILFNNVVRF 338
                               PG  N M S  +  YS  ++  + +H T +P         
Sbjct: 135 ------------------VAPGPDNPMGSRALYLYSGGKDTLFRIHGTNQPEYIGAS--- 173

Query: 339 ETSGCVRVRN 348
            +SGC+R+ N
Sbjct: 174 ISSGCIRLTN 183


>gi|15894296|ref|NP_347645.1| cell wall biogenesis enzymedomain-containing related to
           L-alanoyl-D-glutamate peptidase); peptodoglycan-binding
           domain [Clostridium acetobutylicum ATCC 824]
 gi|15023918|gb|AAK78985.1|AE007616_7 Cell wall biogenesis enzyme (N-terminal domain related to
           N-Acetylmuramoyl-L-alanine amidase and C-terminal domain
           related to L-alanoyl-D-glutamate peptidase);
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325508424|gb|ADZ20060.1| Cell wall biogenesis enzyme [Clostridium acetobutylicum EA 2018]
          Length = 279

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P   L L     SV+ L+  L           ++  FD+     V+ FQ+ H L P 
Sbjct: 2   PTFP--TLRLYYEGPSVRILQMNLYGLNYRYNGLKVTGVFDSLTYEVVRDFQVEHKLVPD 59

Query: 155 GMVDSSTLEAMNVPVDLRIRQL 176
           G+V   T   +   V     +L
Sbjct: 60  GIVGPITWSVLLSQVTSIQNKL 81



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             V  ++ +L            +  F      AV  FQ  +GL  +G+VD  T + +
Sbjct: 72  SQVTSIQNKLNSV--YFTVGTPNGIFGPVTIDAVTRFQSVNGLVKNGVVDPRTRQQL 126


>gi|39934687|ref|NP_946963.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|192290204|ref|YP_001990809.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39648537|emb|CAE27058.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
 gi|192283953|gb|ACF00334.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 193

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 49/175 (28%), Gaps = 46/175 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R   + E       ++++     L  V+     LR  + VGR D        RI      
Sbjct: 51  RETVMFEGNYAPGTIVISTRERRLYLVQGDGTALRYGIGVGR-DGFRWSGTHRITAKREW 109

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 110 PGWTPPAQMLRRR---------------------------------------PDLPRYMA 130

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
            G+ N + +  +         +H + EP          +SGC R+ N  + DL  
Sbjct: 131 GGEDNPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTNDDVKDLYD 181


>gi|308232610|ref|ZP_07416616.2| hydrolase [Mycobacterium tuberculosis SUMu001]
 gi|308371501|ref|ZP_07425158.2| hydrolase [Mycobacterium tuberculosis SUMu003]
 gi|308371550|ref|ZP_07425287.2| hydrolase [Mycobacterium tuberculosis SUMu004]
 gi|308375032|ref|ZP_07442437.2| hydrolase [Mycobacterium tuberculosis SUMu007]
 gi|308376280|ref|ZP_07438228.2| hydrolase [Mycobacterium tuberculosis SUMu008]
 gi|308378515|ref|ZP_07482827.2| hydrolase [Mycobacterium tuberculosis SUMu009]
 gi|308379665|ref|ZP_07487059.2| hydrolase [Mycobacterium tuberculosis SUMu010]
 gi|308380864|ref|ZP_07491276.2| hydrolase [Mycobacterium tuberculosis SUMu011]
 gi|308213429|gb|EFO72828.1| hydrolase [Mycobacterium tuberculosis SUMu001]
 gi|308328608|gb|EFP17459.1| hydrolase [Mycobacterium tuberculosis SUMu003]
 gi|308336263|gb|EFP25114.1| hydrolase [Mycobacterium tuberculosis SUMu004]
 gi|308347665|gb|EFP36516.1| hydrolase [Mycobacterium tuberculosis SUMu007]
 gi|308351583|gb|EFP40434.1| hydrolase [Mycobacterium tuberculosis SUMu008]
 gi|308352290|gb|EFP41141.1| hydrolase [Mycobacterium tuberculosis SUMu009]
 gi|308356293|gb|EFP45144.1| hydrolase [Mycobacterium tuberculosis SUMu010]
 gi|308360180|gb|EFP49031.1| hydrolase [Mycobacterium tuberculosis SUMu011]
          Length = 324

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V  L+ RL   G    +  +   F     +A+  +Q  +GL   G+    TL ++
Sbjct: 23  GDDVATLQARLQDLGFY--TGLVDGHFGLQTHNALMSYQREYGLAADGICGPETLRSL 78


>gi|84503185|ref|ZP_01001270.1| hypothetical protein OB2597_16522 [Oceanicola batsensis HTCC2597]
 gi|84686751|ref|ZP_01014638.1| hypothetical protein 1099457000266_RB2654_22278 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|114762600|ref|ZP_01442044.1| ErfK/YbiS/YcfS/YnhG [Pelagibaca bermudensis HTCC2601]
 gi|84388426|gb|EAQ01375.1| hypothetical protein OB2597_16522 [Oceanicola batsensis HTCC2597]
 gi|84665182|gb|EAQ11661.1| hypothetical protein RB2654_22278 [Rhodobacterales bacterium
           HTCC2654]
 gi|114544855|gb|EAU47860.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. HTCC2601]
          Length = 151

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 54/148 (36%), Gaps = 42/148 (28%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           A  L  +E G   +R  V + + D   P     I R +  P+W   +S+I+        +
Sbjct: 12  ARYLYHIEEGGTAMRYGVAIAKGDLYEP-GTYTIRRKVEWPHWTPTQSMIE--------R 62

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN 320
           DP+  +                            F    +PG  NA+ S  +  F    +
Sbjct: 63  DPEAYER---------------------------FADGMEPGPNNALGSRALYLFVGDRD 95

Query: 321 TY--MHDTPEPILFNNVVRFETSGCVRV 346
           TY  +H TP P       R  +SGCVR+
Sbjct: 96  TYLRIHGTPSPRSIG--GRA-SSGCVRM 120


>gi|319650801|ref|ZP_08004939.1| hypothetical protein HMPREF1013_01545 [Bacillus sp. 2_A_57_CT2]
 gi|317397499|gb|EFV78199.1| hypothetical protein HMPREF1013_01545 [Bacillus sp. 2_A_57_CT2]
          Length = 205

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+     L  G++   V  ++  L   G  +        +    E+AV+ FQ   GL   
Sbjct: 22  PKADAAVLKNGSAGPEVTYIQSALQKLGYFNTDNT--GYYGTVTENAVRNFQYDFGLAAD 79

Query: 155 GMVDSST 161
           G+V  +T
Sbjct: 80  GIVGVNT 86


>gi|222084255|ref|YP_002542781.1| hypothetical protein Arad_0072 [Agrobacterium radiobacter K84]
 gi|221721703|gb|ACM24859.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 224

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 45/197 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I++++    R     +       ++VN     L  +      +R  + VG+    +
Sbjct: 58  PAIPIQKVKPQFRRQIVAYQSNEAEGTIIVNTRERHLYYILGNGEAMRYGIGVGKQG-FS 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P+ +  +     + +   Y+                      
Sbjct: 117 WSGTAYVAWKQEWPTWHPPKEMAVRR--PEIAK---YVDGG------------------- 152

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCV 344
                       +PG  N + +  +  Y+         +H TPE           +SGC+
Sbjct: 153 -----------MNPGLSNPLGARAMYLYNEKGQDTLFRLHGTPEWASIGT---AASSGCI 198

Query: 345 RV--RNIIDLDVWLLKD 359
           R+  +++IDL   +L  
Sbjct: 199 RLINQDVIDLYSRVLPG 215


>gi|299134453|ref|ZP_07027646.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298591200|gb|EFI51402.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 263

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 40/183 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++ + Q++    R          +  ++V+ PA  L  V  G+   R  + VGR   + 
Sbjct: 82  PEVDVSQVERRYWRRDVDYTSSEDVGTLIVDTPAKYLYHVLPGQRATRYGIGVGREGFE- 140

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P WV P S+IQ+     L++           +++             
Sbjct: 141 WSGRALVAYGRAWPRWVPPDSMIQRQ--PELKR---------YSIVNGG----------- 178

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYS--RNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  +   R+  Y +H T EP          +SGC+R
Sbjct: 179 -----------MQPGLRNPLGARALYIHDHGRDTLYRLHGTSEPGSIGK---AVSSGCIR 224

Query: 346 VRN 348
           + N
Sbjct: 225 LLN 227


>gi|298493144|ref|YP_003723321.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298235062|gb|ADI66198.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 200

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 8/67 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V+ ++  L I         +   +       V+ FQ R+GL   G+V  ST
Sbjct: 142 LRQGARGERVRVVQRALGI--------RVDGVYGPNTAYHVRNFQRRNGLLVDGIVGPST 193

Query: 162 LEAMNVP 168
             A+ + 
Sbjct: 194 RRALGIS 200


>gi|226357324|ref|YP_002787064.1| hypothetical protein Deide_22781 [Deinococcus deserti VCD115]
 gi|226319314|gb|ACO47310.1| Conserved hypothetical protein, precursor [Deinococcus deserti
           VCD115]
          Length = 295

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +   ++  + RLI   +          +     + V+ FQ  + L  +G +D +T  A+
Sbjct: 222 MNGSDIRAAQNRLIQLTEDSRGGQGDGWYGPVTAATVRAFQAANNLPVTGRIDQATWRAL 281

Query: 166 NVPVD 170
             P  
Sbjct: 282 FSPAA 286


>gi|332974764|gb|EGK11680.1| spore cortex-lytic enzyme [Desmospora sp. 8437]
          Length = 234

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  V  L+ RL   G           +    E  V  FQ  H L   G+  + T   
Sbjct: 38  GSKNGDVWDLQARLNKLGY---KTKRDGVYGLQTERQVIQFQKDHKLRIDGISGAQTWGE 94

Query: 165 M---------NVPVDLRIRQLQVNLMRIKKL 186
           +          V       ++ +     K +
Sbjct: 95  LKKLTPSHGGKVSGKASADKVSLTQEDRKWM 125


>gi|332799446|ref|YP_004460945.1| carboxyl-terminal protease [Tepidanaerobacter sp. Re1]
 gi|332697181|gb|AEE91638.1| carboxyl-terminal protease [Tepidanaerobacter sp. Re1]
          Length = 473

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + L  GN  + V  +++RL        +      F    + AVK  Q + GL  +
Sbjct: 372 PLNSQKTLKYGNIGLEVLGIQQRLRFLNLF--NTTPDGVFGPRTQQAVKALQQKAGLPST 429

Query: 155 GMVDSSTLEAMN 166
           G+VD++  +A++
Sbjct: 430 GVVDANFYKALD 441


>gi|321314327|ref|YP_004206614.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|320020601|gb|ADV95587.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           BSn5]
          Length = 273

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%)

Query: 97  LPIRPLH---LGNSSVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRH 149
           LP            S +V++++  L         K    G+   +      A++ FQ+ +
Sbjct: 193 LPSGIFKVKSPLMHSAAVEQIQTALAALHFYPDKKAKNFGIDSYYGPKTADAIRRFQLMN 252

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL+P G+    T   +  
Sbjct: 253 GLNPDGIYGPETKAKIEA 270


>gi|316935215|ref|YP_004110197.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315602929|gb|ADU45464.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 192

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 53/196 (27%), Gaps = 46/196 (23%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
               M      R       + R   + E +     ++++     L  V+     LR  + 
Sbjct: 29  LRAVMGFGPFYRSGPSANPIPRETVMFEGRYAPGTIVISTRERRLYLVQGDGTALRYGIG 88

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VGR D        RI      P W  P  ++++                           
Sbjct: 89  VGR-DGFRWSGTHRITAKREWPGWTPPAQMLRRR-------------------------- 121

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                        P+       G+ N + +  +         +H + EP          +
Sbjct: 122 -------------PDLPRYMAGGEDNPLGARAMYLG-STLYRIHGSNEPETIGQ---AVS 164

Query: 341 SGCVRVRN--IIDLDV 354
           SGC R+ N  + DL  
Sbjct: 165 SGCFRMTNDDVKDLYD 180


>gi|229164005|ref|ZP_04291942.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus R309803]
 gi|228619388|gb|EEK76277.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus R309803]
          Length = 153

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 36/163 (22%), Gaps = 59/163 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  +NGK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDFYQNGKFVKSFTVATGKAATPTPKGTFKIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              +H T             T GC+R+ N      WL +  P 
Sbjct: 109 TYAIHGTNNNQAIGK---ATTLGCIRMYNND--VRWLFERIPE 146


>gi|23501051|ref|NP_697178.1| putative lipoprotein [Brucella suis 1330]
 gi|161618128|ref|YP_001592015.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|260567222|ref|ZP_05837692.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|23346917|gb|AAN29093.1| lipoprotein, putative [Brucella suis 1330]
 gi|161334939|gb|ABX61244.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|260156740|gb|EEW91820.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
          Length = 206

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++      + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMSEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|17231422|ref|NP_487970.1| hypothetical protein alr3930 [Nostoc sp. PCC 7120]
 gi|17133064|dbj|BAB75629.1| alr3930 [Nostoc sp. PCC 7120]
          Length = 228

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 58  RVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRER 117
                  S  P  + + +A+ ++ I     I S           L   NS VSV+ L+  
Sbjct: 122 NFTKFKKSSFP--NSQELARKQRNINNI-VIASSQTLTNPISPNLSFSNSGVSVRVLQRL 178

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           L+ +G       +   F    E AVK FQ +  L   G+V   T 
Sbjct: 179 LVANGY---PIPVDGVFGPVTEIAVKAFQEQQNLTVDGIVGVQTW 220


>gi|313897890|ref|ZP_07831431.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312957425|gb|EFR39052.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 226

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y       G+P      L  G+  V V  L++ L   G    ++ L   F     +A+
Sbjct: 135 KRYGTPACSAGFP-----VLRSGSRGVYVLILQDALNALGY--STQTLDGVFGGNTRNAL 187

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             +Q  +GL   G+V   T   +
Sbjct: 188 VAYQRDNGLSADGVVGCGTWTRI 210


>gi|295106181|emb|CBL03724.1| Putative peptidoglycan-binding domain-containing protein
           [Gordonibacter pamelaeae 7-10-1-b]
          Length = 301

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V+ L++ L   G           F AY E A++
Sbjct: 66  WSALVDASYFLGDRTLYLRMPHFHGHDVEELQQALGALGF--ACGANDGIFGAYTELALR 123

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ+  GL   G+  + T  A+ 
Sbjct: 124 KFQLNLGLPSDGIAGAYTYAAIR 146



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P+  +   ++  +V+ +++RL   G LD    +  AF     +AV+ F ++ GL     V
Sbjct: 3   PMETIKRHDTGAAVEDVQQRLATIGLLDQ-AAIDGAFGEQTAAAVRAFCIQAGLPAGEDV 61

Query: 158 DSSTLEAM 165
                 A+
Sbjct: 62  TGKVWSAL 69


>gi|126729119|ref|ZP_01744933.1| ErfK/YbiS/YcfS/YnhG family protein [Sagittula stellata E-37]
 gi|126710109|gb|EBA09161.1| ErfK/YbiS/YcfS/YnhG family protein [Sagittula stellata E-37]
          Length = 187

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 66/228 (28%), Gaps = 54/228 (23%)

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN-----LMRIKKLLEQKMGLRYVLVNIP 201
            R  L  SG+V  +   A+ VP   R   ++ N     +   +    + +G   ++ +  
Sbjct: 7   TRRALLNSGLVAGA--AALIVPATARAADVRRNVSSFVMQDWRDHFSE-IGKGCIVCDTE 63

Query: 202 AASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           + +L     +G         V + D  T   ++ I R    P W    S +  +      
Sbjct: 64  SRALHYWAADGVDYRIYPTSVPKSDELTKRGYTEIVRKKVGPSWTPTASQM--ERFP--- 118

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
                                     DW                 N + +  +       
Sbjct: 119 --------------------------DWKPVAGGA--------PDNPLGTHAMYLSWP-A 143

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +H T +        R  + GC+ + N   +   L + TP  ++  +
Sbjct: 144 YLIHGTHDTRKIG---RRSSDGCIGLYN-EKIAE-LFEITPIGTQVRL 186


>gi|311747003|ref|ZP_07720788.1| putative peptidoglycan binding domain protein [Algoriphagus sp.
           PR1]
 gi|126578703|gb|EAZ82867.1| putative peptidoglycan binding domain protein [Algoriphagus sp.
           PR1]
          Length = 274

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 12/148 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   +V  L+E L   G    S   S  FD   ++AVK FQ +H L   G V   T   +
Sbjct: 8   SRGAAVSFLQELLNKVGY---SLNPSGYFDLTTDAAVKDFQQKHDLVVDGKVGVKTWT-I 63

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
            +        +       K L EQ +    +   +    L AV+       S +      
Sbjct: 64  LISKTNPAGTIGN-----KFLSEQDLIDFSIKYEL---ELAAVKAVNEVESSGIGFLVNG 115

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQK 253
           +   +    +         + P  ++ +
Sbjct: 116 KPKILFEGHVFWRQLKSRGIDPNQLMHE 143


>gi|315169844|gb|EFU13861.1| peptidase [Enterococcus faecalis TX1342]
          Length = 480

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV+  Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVRDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|307309484|ref|ZP_07589140.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307320605|ref|ZP_07600019.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306893755|gb|EFN24527.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306900069|gb|EFN30689.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 206

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 62/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  R++     R +           V+V+ P   L  +E G   +R  V +GR     
Sbjct: 32  PAVPYREMDPKYFRQRVPDPTGEPAGTVVVDTPGRFLYLIEPGGTAMRYGVGIGREGFA- 90

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I+     P W  P  +I +     L +           + +             
Sbjct: 91  WQGEGIIHWRQPWPRWKPPADMIARR--PELEK---------YSVANGG----------- 128

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  F +  +    +H TPE           +SGCVR
Sbjct: 129 -----------MAPGIDNPLGARALYIFQNGQDTLYRLHGTPEWKSIGK---AVSSGCVR 174

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +    P
Sbjct: 175 LVNQDVIDLYKRVPYHAP 192


>gi|297155629|gb|ADI05341.1| putative serine-threonine protein kinase [Streptomyces
           bingchenggensis BCW-1]
          Length = 562

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+   +V++++  L          G+   F    ++AV  FQ  H L   G V   T  A
Sbjct: 500 GSRGAAVRQVQCILKARKYDIGPHGIDGQFGPDTKAAVIAFQRDHNLHRDGQVGEDTWPA 559

Query: 165 MNV 167
           +  
Sbjct: 560 LRA 562


>gi|229159834|ref|ZP_04287841.1| hypothetical protein bcere0009_6350 [Bacillus cereus R309803]
 gi|228623573|gb|EEK80392.1| hypothetical protein bcere0009_6350 [Bacillus cereus R309803]
          Length = 253

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +    +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIPGGAPNNPLGTRWLGLDKKE-YAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RNIIDLDVWLLKDTP 361
            +  D+  WL    P
Sbjct: 123 HD-RDI-QWLYDRVP 135


>gi|156742786|ref|YP_001432915.1| peptidoglycan binding domain-containing protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156234114|gb|ABU58897.1| Peptidoglycan-binding domain 1 protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 554

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 42/161 (26%), Gaps = 18/161 (11%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            +  SL                 Y    ++        +   I      +  +      +
Sbjct: 70  TVARSLDALAFTVGNDIAFAPGQYQPGSDEGRALLAHELTHTIQQTGGAVRVQ-----RQ 124

Query: 81  AIAFYQDILSRGGWPELPIRP------------LHLGNSSVSVQRLRERLIISGDLDPSK 128
            +   Q + +  G PE    P            +  G+    V   ++ L   G   P  
Sbjct: 125 TLPDLQGVGANLGLPETMQSPPSSGLQSGGRRMISYGSQGPDVADAQQLLNQHG-AAPPL 183

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +   F      A   FQ   GL P G++   T  A+    
Sbjct: 184 AVDGIFGPKTRQATIAFQKSRGLAPDGIIGPLTWGALESGA 224


>gi|56963123|ref|YP_174850.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
 gi|56909362|dbj|BAD63889.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
          Length = 301

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R +  G      + L+  L ++G           F    E AV+ FQ   GL   G+ 
Sbjct: 235 AARNVRKGAKGNLTRVLQALLYMAGH--NPGPFDGVFGNGTEKAVRAFQRDKGLGVDGIA 292

Query: 158 DSSTLEAM 165
             +T  A+
Sbjct: 293 GKNTWRAL 300


>gi|255659023|ref|ZP_05404432.1| LysM domain protein [Mitsuokella multacida DSM 20544]
 gi|260848808|gb|EEX68815.1| LysM domain protein [Mitsuokella multacida DSM 20544]
          Length = 187

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +V++++  LI  G L  +            +A+K FQ  +GLD  G+  + T 
Sbjct: 21  RQGSRGPAVRQVQSLLIEQGWLTGAA--DGICGNQTVAAIKSFQKANGLDADGVCGNGTY 78

Query: 163 EAMN 166
             ++
Sbjct: 79  SVLS 82


>gi|154686539|ref|YP_001421700.1| hypothetical protein RBAM_021080 [Bacillus amyloliquefaciens FZB42]
 gi|154352390|gb|ABS74469.1| SleB [Bacillus amyloliquefaciens FZB42]
          Length = 289

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + G+ P  
Sbjct: 29  AFSNQVIQRGATGDDVIELQARLQYNGFY--NGKIDGVYGWTTYWAVRNFQEKFGMKPVD 86

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 87  GLVGAKT 93


>gi|307265107|ref|ZP_07546667.1| spore cortex-lytic enzyme [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326390828|ref|ZP_08212380.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus JW 200]
 gi|306919905|gb|EFN50119.1| spore cortex-lytic enzyme [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325993087|gb|EGD51527.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus JW 200]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G    +  +   F      AV+ FQ  +GL  +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYY--TGAVDGFFGVRTWLAVRKFQAYNGLRVTGIVDDDTKVA 99

Query: 165 MNVPVDL 171
           +      
Sbjct: 100 LGFTTTA 106


>gi|317122862|ref|YP_004102865.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter marianensis DSM
           12885]
 gi|315592842|gb|ADU52138.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter marianensis DSM
           12885]
          Length = 260

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 12/87 (13%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVV 336
           G+      V                       +      +      +H T  P       
Sbjct: 102 GRPGEPSPVGEWRVTDIAHW------PGGPFGARWFGLSAPWGSYGIHGTNNPGSIGT-- 153

Query: 337 RFETSGCVRV--RNIIDLDVWLLKDTP 361
            + + GC+R+   +++ LD  +   TP
Sbjct: 154 -YASLGCIRMFNEDVLTLDDLVKVGTP 179



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 10/85 (11%)

Query: 85  YQDILSRGGWPELPIRP--------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
             D++  G   ++               G     V  L+  L  +G           +  
Sbjct: 170 LDDLVKVGTPVKITGTTEVYYKLPVYRRGAVGQDVALLQLSLRAAGF--NPGVADGVYGG 227

Query: 137 YVESAVKLFQMRHGLDPSGMVDSST 161
             E AV   +   GL+P G  D++ 
Sbjct: 228 TTEKAVAAAEWWFGLEPDGTADAAL 252


>gi|307300910|ref|ZP_07580679.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|306903865|gb|EFN34451.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 246

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 42/185 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               I +++   +R +           V+++     L  V+ G + LR  + VG+   + 
Sbjct: 58  PATDISKVEPRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMALRYGIGVGKAGLE- 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +R+ R    P W     ++ ++                                  
Sbjct: 117 FEGEARVGRKAEWPRWTPTSDMVAREP--------------------------------- 143

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       DPG  N +    +     +R+  + +H T E           +SGC+R
Sbjct: 144 --ERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHGTTEAWSIGK---AVSSGCIR 198

Query: 346 VRNII 350
           + N  
Sbjct: 199 LFNPD 203


>gi|307320727|ref|ZP_07600139.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306893654|gb|EFN24428.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 246

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 42/185 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               I +++   +R +           V+++     L  V+ G + LR  + VG+   + 
Sbjct: 58  PATDISKVEPRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMALRYGIGVGKAGLE- 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +R+ R    P W     ++ ++                                  
Sbjct: 117 FEGEARVGRKAEWPRWTPTSDMVAREP--------------------------------- 143

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       DPG  N +    +     +R+  + +H T E           +SGC+R
Sbjct: 144 --ERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHGTTEAWSIGK---AVSSGCIR 198

Query: 346 VRNII 350
           + N  
Sbjct: 199 LFNPD 203


>gi|295314762|gb|ADF97531.1| PlyM6 [uncultured phage]
          Length = 357

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++     +    L  G +  +V+ L+  L  +G L     +   F    E+AVK FQ  
Sbjct: 205 AAKPTPSTVKRDYLLDGVTGAAVKTLQSELKQAGFL---LSVDGVFGKGTETAVKAFQRA 261

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+  + +   +N 
Sbjct: 262 NGLAVDGVFGTGSQAKLNA 280


>gi|225574799|ref|ZP_03783409.1| hypothetical protein RUMHYD_02876 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037999|gb|EEG48245.1| hypothetical protein RUMHYD_02876 [Blautia hydrogenotrophica DSM
           10507]
          Length = 619

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 31/71 (43%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+   +V+  ++ LI  G      G    F    ++A + FQ  +GL+  G    +T + 
Sbjct: 393 GDQGEAVKVYQKNLIEIGYNCGKNGADGDFGPATKAATQEFQGDYGLEQDGNAGPATQKK 452

Query: 165 MNVPVDLRIRQ 175
           ++  V  + + 
Sbjct: 453 LSAEVKKKEQT 463


>gi|311032631|ref|ZP_07710721.1| putative muramoyl-pentapeptide carboxypeptidase [Bacillus sp.
           m3-13]
          Length = 240

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSK-----GLSVAFDAYVESAVKLFQMRHGLDP 153
            R L  G+S   V+ L+ R  ++G    S       +   F    ++AV  FQ  +GL  
Sbjct: 35  TRTLSEGSSGTDVRELQIR--VAGWAADSPQQTVVSVDGQFGPGTKAAVIRFQRAYGLTA 92

Query: 154 SGMVDSSTLEAMN 166
            G+V   T   +N
Sbjct: 93  DGVVGPQTQAKLN 105


>gi|15963816|ref|NP_384169.1| hypothetical protein SMc02582 [Sinorhizobium meliloti 1021]
 gi|15072991|emb|CAC41450.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 278

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 45/190 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I ++     R       K     ++VN P+  L  V  G   +R  + VG+     
Sbjct: 112 PGVPINRVDQRFHRQIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAVRYGIGVGKQGFA- 170

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P     K+M     +  +Y++                     
Sbjct: 171 WEGEAYVAWKQEWPTWHPP-----KEMAERKPEVARYVEAG------------------- 206

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCV 344
                        PG  N + +  +  +++        +H TPE           +SGC+
Sbjct: 207 -----------MGPGISNPLGARALYLFNKEGRDTLFRLHGTPEWSSIGT---AASSGCI 252

Query: 345 RV--RNIIDL 352
           R+  ++I+DL
Sbjct: 253 RLMNQDIMDL 262


>gi|85716003|ref|ZP_01046980.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85697201|gb|EAQ35082.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 374

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 58/190 (30%), Gaps = 48/190 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           +QL   L R +     K     ++V+     L  +      +R  V VGR D  T     
Sbjct: 174 KQLPERLRRKEVTFATKEPAGTIVVDTSNTHLYYILGNNRAIRYGVRVGR-DGFTWSGVQ 232

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +I+R    P W  P  +I++                                        
Sbjct: 233 KISRKAEWPDWHPPTEMIERQ--------------------------------------- 253

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNII 350
           P        G  N + +  +   S    Y +H T +P        F +SGC+ +   ++ 
Sbjct: 254 PYLPRFMAGGPGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGMLNEDVS 308

Query: 351 DLDVWLLKDT 360
           DL   +   T
Sbjct: 309 DLFDRVKVGT 318


>gi|300864980|ref|ZP_07109811.1| Glycoside hydrolase family 25 [Oscillatoria sp. PCC 6506]
 gi|300337015|emb|CBN54961.1| Glycoside hydrolase family 25 [Oscillatoria sp. PCC 6506]
          Length = 440

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L  G+ +  VQ +++ L   G       +   +    +SA   FQ   GL+  G+V  
Sbjct: 189 ESLREGSPAPKVQEIQKHLKNKGFY--QGTIDGNYSTSTKSAAIAFQKSQGLEADGIVGL 246

Query: 160 STLEAM 165
            TL A+
Sbjct: 247 KTLTAL 252


>gi|158424653|ref|YP_001525945.1| putative chitinase [Azorhizobium caulinodans ORS 571]
 gi|158331542|dbj|BAF89027.1| putative chitinase [Azorhizobium caulinodans ORS 571]
          Length = 293

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V  L+ +L   G           +    E AV+ FQ ++ L   G+    TL A+  
Sbjct: 228 VSDLQSKLNRLGY---RLTADGRYGPKTEEAVRDFQSKNDLKTDGIAGPVTLAALEA 281


>gi|153853426|ref|ZP_01994835.1| hypothetical protein DORLON_00824 [Dorea longicatena DSM 13814]
 gi|149754212|gb|EDM64143.1| hypothetical protein DORLON_00824 [Dorea longicatena DSM 13814]
          Length = 102

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +++E+L +I+G             +      +V+ FQ   GL  +
Sbjct: 17  PGYTLEIGSSGNKVLQMQEQLNVIAGAYPAIPKITADGIYGPATAESVRTFQKVFGLPQT 76

Query: 155 GMVDSSTLEAMN 166
           G VD +T   ++
Sbjct: 77  GTVDYTTWYKIS 88


>gi|315145030|gb|EFT89046.1| peptidase [Enterococcus faecalis TX2141]
          Length = 480

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +   L      +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAYLVDENNAN--YTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|218463532|ref|ZP_03503623.1| hypothetical protein RetlK5_30719 [Rhizobium etli Kim 5]
          Length = 244

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R + L         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEEIDPRYYRQRVLDPTGQPPGTIVVDTPSRFLYLVQADGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 138 WQGSGVIQWRQKWPRWKPPNEMVARQ----------------------------PELVKY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           +PG  N + +  +  F +  +  Y +H  P+           +SGCVR
Sbjct: 170 SIENGGM-----EPGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LLNQDIIDLYDRVPTKAP 239


>gi|27375685|ref|NP_767214.1| hypothetical protein blr0574 [Bradyrhizobium japonicum USDA 110]
 gi|27348823|dbj|BAC45839.1| blr0574 [Bradyrhizobium japonicum USDA 110]
          Length = 171

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 39/148 (26%), Gaps = 45/148 (30%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L  + +    +R  V VG+  +Q     +RI+    NP W  P  + +         
Sbjct: 48  ERRLYLILDDGHAVRYPVGVGKSGKQ-WAGTTRIDGKYRNPAWSPPAEVKR--------- 97

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNN 320
                                         + P        G   N M    +       
Sbjct: 98  ------------------------------DKPQLPDVIPGGSPRNPMGVAAMTLAGGE- 126

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
             +H T  P        F + GC+R+ N
Sbjct: 127 YAIHGTNVPGSVG---GFVSYGCIRMLN 151


>gi|258652666|ref|YP_003201822.1| peptidoglycan-binding protein [Nakamurella multipartita DSM 44233]
 gi|258555891|gb|ACV78833.1| Peptidoglycan-binding domain 1 protein [Nakamurella multipartita
           DSM 44233]
          Length = 201

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            + + G WP L        NS+V+V+ L+  L           +   F     +AV+ FQ
Sbjct: 47  AVPAVGTWPVLSHGVA---NSAVTVRSLQYLLNA---HASCLAVDGVFGPRTTAAVRNFQ 100

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVD 170
            RH L   G+V   T  A+ V + 
Sbjct: 101 ARHALVVDGIVGPQTWTALLVTIR 124



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 69  IISKETIAQTEKAIAF----YQDILSRGGWPELPIRPLHLGNSSVSVQRLR----ERLII 120
           +    T A      A        I+    W  L +  +  G+   +VQ  +     R + 
Sbjct: 87  VFGPRTTAAVRNFQARHALVVDGIVGPQTWTAL-LVTIRRGSVGPAVQAFQDQMNARAVA 145

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMR----HGLDPSGMVDSSTLEAMNVPVDLR 172
           +G       +   F    ESAV  FQ R     G    G+V   T +     V  R
Sbjct: 146 AGQAPFLA-VDGIFGPKTESAVYYFQNRLADYWGTTVDGIVGPQTWQPTISNVLPR 200


>gi|167039266|ref|YP_001662251.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X514]
 gi|256751676|ref|ZP_05492551.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus CCSD1]
 gi|300913906|ref|ZP_07131223.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X561]
 gi|307725409|ref|YP_003905160.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X513]
 gi|166853506|gb|ABY91915.1| cell wall hydrolase, SleB [Thermoanaerobacter sp. X514]
 gi|256749485|gb|EEU62514.1| spore cortex-lytic enzyme [Thermoanaerobacter ethanolicus CCSD1]
 gi|300890591|gb|EFK85736.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X561]
 gi|307582470|gb|ADN55869.1| spore cortex-lytic enzyme [Thermoanaerobacter sp. X513]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G    +  +   F      AV+ FQ  +GL  +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYY--TGAVDGFFGVRTWLAVRKFQAYNGLRVTGIVDDDTKVA 99

Query: 165 MNVPVDL 171
           +      
Sbjct: 100 LGFTTTA 106


>gi|320334702|ref|YP_004171413.1| peptidoglycan-binding domain 1 protein [Deinococcus maricopensis
           DSM 21211]
 gi|319755991|gb|ADV67748.1| Peptidoglycan-binding domain 1 protein [Deinococcus maricopensis
           DSM 21211]
          Length = 258

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              +   ++ L+ RL+    +D  KG    +    E+ +  FQ  +GL  +G+VD++T  
Sbjct: 173 PRMNGEDIRALQNRLMDVSRIDRGKGGDGWYGPMTEANIIAFQSANGLPANGVVDAATWR 232

Query: 164 AM 165
           A+
Sbjct: 233 AL 234


>gi|218461346|ref|ZP_03501437.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli Kim 5]
          Length = 204

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 43/182 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++V+ PA     V      +R  V VGR      
Sbjct: 42  QVPIDKIKPELRRQEVAYETAYAAGTIVVDTPARRAYYVLGNGRAMRYGVGVGREG-LAF 100

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + + R    P W    ++ +++                                   
Sbjct: 101 AGGAYVGRKAEWPSWTPTENMQRRE----------------------------------- 125

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +      +  +  +H T +P          +SGC+R+
Sbjct: 126 -ERYRRLAGGMPGGPNNPLGARAMYLYRGGNDTHFRIHGTNQPESIG---LAMSSGCIRM 181

Query: 347 RN 348
            N
Sbjct: 182 MN 183


>gi|254705317|ref|ZP_05167145.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261756029|ref|ZP_05999738.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261745782|gb|EEY33708.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
          Length = 206

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y  V+    ++ A+ + K+  +    V +           ++      Y ++      + 
Sbjct: 33  YSSVSDAGYAIPAIPSEKIPAQYRRQVVKYATDEKPGTIIVDAREKFLYLIMSEGKAVRY 92

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            + + R+  ++     + M  E         +    PE   +    DPG  N + +  + 
Sbjct: 93  GIGVGRRGFEWSGTARVAMKREWPTWTPPSAMIKRQPELAKYRNGMDPGLRNPLGARALY 152

Query: 315 FYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y++       +H TPE       +   +SGC+R+ N
Sbjct: 153 LYNKGGDTGYRLHGTPEWWSIGKAM---SSGCIRLMN 186


>gi|27377732|ref|NP_769261.1| hypothetical protein bll2621 [Bradyrhizobium japonicum USDA 110]
 gi|27350877|dbj|BAC47886.1| bll2621 [Bradyrhizobium japonicum USDA 110]
          Length = 228

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 66/218 (30%), Gaps = 59/218 (27%)

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL------------ 197
           GL  SG + ++  EA +        +  +  +R +     +   R ++            
Sbjct: 14  GLMLSGCMQATHFEATDTKAFKPKDKELLAKVRYENTPVAEPFRRAIVEYHRKESPGSIV 73

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+     L  V +G   +R  + VG          +++  +   P W      I +    
Sbjct: 74  VDSDNHYLYYVLDGGKAIRYGITVGEEA-MAWSGIAKVGSMTEWPAWHPTPGEISR---- 128

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
                P Y+                                   PG  N M S  +  YS
Sbjct: 129 --LGVPTYVA----------------------------------PGPDNPMGSRAMYLYS 152

Query: 318 --RNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
             ++  + +H T +P          +SGC+R+ N   +
Sbjct: 153 GGKDTLFRIHGTNQPEYIGAS---ISSGCIRLTNEDAI 187


>gi|317489796|ref|ZP_07948295.1| spore cortex-lytic enzyme [Eggerthella sp. 1_3_56FAA]
 gi|325830265|ref|ZP_08163722.1| peptidoglycan binding domain protein [Eggerthella sp. HGA1]
 gi|316911142|gb|EFV32752.1| spore cortex-lytic enzyme [Eggerthella sp. 1_3_56FAA]
 gi|325487732|gb|EGC90170.1| peptidoglycan binding domain protein [Eggerthella sp. HGA1]
          Length = 301

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 12/83 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V  L+  L   G           F A+ E A++
Sbjct: 66  WAALVDASFTLGDRTLYLRMPHFHGHDVLELQHALGALGF--ACGATDGIFGAFTELALR 123

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ+  GL   G+  + T  A+ 
Sbjct: 124 KFQLNLGLPSDGIAGAYTYAAIR 146



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +   ++  +V+ +++RL+  G LDP   +  AF      AV+ F    GL  +  V  
Sbjct: 5   ETIKRHDTGPAVEDVQQRLVTIGLLDP-ADVDGAFGDTTAEAVQAFCGGAGLPLTDEVTE 63

Query: 160 STLEAM 165
               A+
Sbjct: 64  KVWAAL 69


>gi|257790349|ref|YP_003180955.1| Peptidoglycan-binding domain 1 protein [Eggerthella lenta DSM 2243]
 gi|257474246|gb|ACV54566.1| Peptidoglycan-binding domain 1 protein [Eggerthella lenta DSM 2243]
          Length = 330

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 28/83 (33%), Gaps = 12/83 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V  L+  L   G           F A+ E A++
Sbjct: 95  WAALVDASFTLGDRTLYLRMPHFHGHDVLELQHALGALGF--ACGATDGIFGAFTELALR 152

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ+  GL   G+  + T  A+ 
Sbjct: 153 KFQLNLGLPSDGIAGAYTYAAIR 175



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             +   ++  +V+ +++RL+  G LDP   +  AF      AV+ F    GL  +  V  
Sbjct: 34  ETIKRHDTGPAVEDVQQRLVTIGLLDP-ADVDGAFGDTTAEAVQAFCGGAGLPLTDEVTE 92

Query: 160 STLEAM 165
               A+
Sbjct: 93  KVWAAL 98


>gi|153930828|ref|YP_001385112.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153935450|ref|YP_001388581.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|152926872|gb|ABS32372.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931364|gb|ABS36863.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L    G    +V+ ++ +L   G      G+   F      AVK FQ    L   G
Sbjct: 164 PGYLLKYNPGRFDANVKLIQSKLQNIGYSVGKYGVDGYFGDGTLLAVKCFQRDCNLMIDG 223

Query: 156 MVDSSTLEAM 165
           ++   T + +
Sbjct: 224 IIGVDTWKRI 233


>gi|297545506|ref|YP_003677808.1| spore cortex-lytic enzyme [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843281|gb|ADH61797.1| spore cortex-lytic enzyme [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G       +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYY--QGAVDGFFGVRTWLAVRKFQAYNGLNVTGIVDDDTKVA 99

Query: 165 MNVPVDL 171
           +      
Sbjct: 100 LGFTTTA 106


>gi|78044166|ref|YP_359174.1| putative peptidoglycan-binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996281|gb|ABB15180.1| putative peptidoglycan-binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 214

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            E+P R L +G+    V  L+E L + G       +   F   +E AV  F+  +GL   
Sbjct: 142 QEIPWRTLVVGSKGSDVLILQELLKLKGYYS--GPIDGIFGRKMEKAVVKFRADYGLPSD 199

Query: 155 GMVDSSTLEAMNV 167
             ++    + + +
Sbjct: 200 NRINMEMYKLLRI 212



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 48/141 (34%), Gaps = 19/141 (13%)

Query: 231 LHSRINRIMFNPYWVIPRSIIQKD---MMALLRQDPQYLKDNNIHMIDEK---GKEVFVE 284
           +  ++  ++F   ++ P + +  +   ++   R    YL   N  +       G      
Sbjct: 1   MVKKLFFLVFLMIFLTPLTGLANEKNIIVIETRTRLLYLFRENKLVKKYPVALGDLKTPT 60

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGC 343
            +           +       +   S  +        Y +H T +P    +   + + GC
Sbjct: 61  PIGCFKITFMRKNW------GSGFGSRFLGLNVPWGMYGIHGTNKPGSIGS---YASHGC 111

Query: 344 VRV--RNIIDLDVWL-LKDTP 361
           +R+  R++ +L   + L+D  
Sbjct: 112 IRMLNRHVEELYEKVHLQDQV 132


>gi|331090953|ref|ZP_08339795.1| hypothetical protein HMPREF9477_00438 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330405175|gb|EGG84711.1| hypothetical protein HMPREF9477_00438 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 421

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++L+E+L +I+G             +     +AVK FQ   GL  +
Sbjct: 337 PGYDLENGSSGDKVRQLQEQLNVIAGAYPAIPKITADGIYGPATAAAVKKFQSIFGLPDT 396

Query: 155 GMVDSSTLEAMNV 167
           G+ D  T   ++ 
Sbjct: 397 GITDYPTWYKISQ 409


>gi|291558332|emb|CBL35449.1| Cell Wall Hydrolase./Putative peptidoglycan binding domain
           [Eubacterium siraeum V10Sc8a]
          Length = 219

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V+ +++ L   G    +  ++  F    E A+  FQ + GL  +G+ D +TL+ 
Sbjct: 34  GSQGSEVEAVQQTLKDRGLF--NAEVTGYFGEKTEEAILRFQKQQGLAQTGVADEATLKR 91

Query: 165 MNVPVD--LRIRQLQVNLMRIKKLLEQKMGLRYV 196
           + + +          +NL+  + +  +  G  Y+
Sbjct: 92  LGISIGSIPPATTANINLL-ARIISAEGRGEPYI 124


>gi|289579365|ref|YP_003477992.1| spore cortex-lytic enzyme [Thermoanaerobacter italicus Ab9]
 gi|289529078|gb|ADD03430.1| spore cortex-lytic enzyme [Thermoanaerobacter italicus Ab9]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G       +   F      AV+ FQ  +GL+ +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYY--RGAVDGFFGVRTWLAVRKFQAYNGLNVTGIVDDDTKVA 99

Query: 165 MNVPVDL 171
           +      
Sbjct: 100 LGFTTTA 106


>gi|111219606|ref|YP_710400.1| hypothetical protein FRAAL0103 [Frankia alni ACN14a]
 gi|111147138|emb|CAJ58785.1| hypothetical protein; putative signal peptide [Frankia alni ACN14a]
          Length = 255

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 25/118 (21%)

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR-------QDPGKINAMASTKIEFYSRN 319
           + +++  +   GK++  E V   + + P    R       +                +  
Sbjct: 139 RGHHLLQVFSDGKQIAQEPVAIGTTDTPTPGGRFYLMELLRPRNPNGPYGPYAFGL-NGF 197

Query: 320 N------------TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
           +              +H T EP +        + GC+R+ N  I  L   +   TP  
Sbjct: 198 STSLSSFDGRKPVIGLHGTNEPKMIGKD---VSHGCIRLSNDAITRLAQTVPLGTPVD 252


>gi|319651370|ref|ZP_08005499.1| sporulation specific N-acetylmuramoyl-L-alanine amidase [Bacillus
           sp. 2_A_57_CT2]
 gi|317396901|gb|EFV77610.1| sporulation specific N-acetylmuramoyl-L-alanine amidase [Bacillus
           sp. 2_A_57_CT2]
          Length = 279

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     V  L+ RL   G    +  +   F      A++ FQ   GL   G+    T
Sbjct: 41  GAVGNDVIELQSRLQYLGFY--NGKIDGVFGWGTYWALRNFQYEFGLPIDGLAGQET 95


>gi|304393323|ref|ZP_07375251.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
 gi|303294330|gb|EFL88702.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
          Length = 167

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 51/180 (28%), Gaps = 46/180 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           + ++   +    +LV+     L         L  TV VGR  +Q     +RI    + P 
Sbjct: 26  RSVVAADVPRGTILVDTSQRRLYLGLGRGQALSYTVAVGRAGKQ-WTGTTRIRSKRWKPA 84

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W     II++        +P               + V                      
Sbjct: 85  WSPTAEIIRE--------NPGI-------------QRVIPSMA----------------- 106

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
             N M    +    +    +H T  P          + GC+R+RN  D+    L     W
Sbjct: 107 ANNPMGVAALVLGKKQ-YAIHGTNRPSKIGK---AVSYGCIRMRNA-DIAD--LYKRVGW 159


>gi|332671624|ref|YP_004454632.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332340662|gb|AEE47245.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 635

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 6/128 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+  ++RL   G   P       F    ++A   +Q  HGL P  ++   T
Sbjct: 81  LRRGHTGEDVRHAQDRLNAHG-AAPPLVTDGIFGPLTQAATTQYQRTHGLSPDAVIGPRT 139

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             ++  P D     +  +  +             +  +  A ++    +G         V
Sbjct: 140 SASLEGPTD-----VGGSSGQAAPRPTGPAPGAVLRYDTSAYTITPPSSGTTLATLRAAV 194

Query: 222 GRVDRQTP 229
                 TP
Sbjct: 195 QAAQGATP 202


>gi|75674817|ref|YP_317238.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74419687|gb|ABA03886.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 221

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN-- 348
                R   G  N + +  +     S++  + +H T +P          +SGC+R+ N  
Sbjct: 130 GGLPSRVAGGPDNPLGARALYLYQGSKDTLFRIHGTNQPEYIGTS---ISSGCIRMTNED 186

Query: 349 IIDLDVWLLKDT 360
            IDL   +   T
Sbjct: 187 AIDLYDRVKVGT 198


>gi|75676754|ref|YP_319175.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74421624|gb|ABA05823.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 283

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 41/144 (28%), Gaps = 44/144 (30%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V+ G   LR  V VG+           I+     P W  P  ++++           
Sbjct: 165 LYLVQGGGKALRYGVGVGKPG-FLWAGTKTISAKREWPAWTPPAEMLKRR---------- 213

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                                        P+       G  N + +  +   S     +H
Sbjct: 214 -----------------------------PDLPRHMVGGPQNPLGARAMYLGSS-LYRIH 243

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            + EP          +SGC+R+RN
Sbjct: 244 GSNEPWTIGTN---VSSGCIRMRN 264


>gi|167036615|ref|YP_001664193.1| cell wall hydrolase SleB [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320115042|ref|YP_004185201.1| spore cortex-lytic enzyme [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166855449|gb|ABY93857.1| cell wall hydrolase, SleB [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319928133|gb|ADV78818.1| spore cortex-lytic enzyme [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 236

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V +++ RL   G    +  +   F      AV+ FQ  +GL  +G+VD  T  A
Sbjct: 42  GNTGSDVAKVQARLKDWGYY--TGAVDGFFGVRTWLAVRKFQAYNGLRVTGIVDDDTKVA 99

Query: 165 MNVPVDL 171
           +      
Sbjct: 100 LGFTTTA 106


>gi|300118714|ref|ZP_07056440.1| spore cortex-lytic enzyme [Bacillus cereus SJ1]
 gi|298723871|gb|EFI64587.1| spore cortex-lytic enzyme [Bacillus cereus SJ1]
          Length = 157

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 32  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 89

Query: 156 MVDSST 161
           +  + T
Sbjct: 90  LAGAKT 95


>gi|228965691|ref|ZP_04126772.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794099|gb|EEM41621.1| Spore cortex-lytic enzyme [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 102

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G S   V  L+ RL  +G    +  +   F      A++ FQ + GL   G
Sbjct: 12  AFSNQVIQRGASGEDVIELQSRLKYNGFY--TGKVDGVFGWGTYWALRNFQEKFGLPVDG 69

Query: 156 MVDSST 161
           +  + T
Sbjct: 70  LAGAKT 75


>gi|75677072|ref|YP_319493.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74421942|gb|ABA06141.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 196

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 45/179 (25%), Gaps = 46/179 (25%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL     +   L         +++      L  ++     +R  + VGR   Q       
Sbjct: 43  QLDPEYRKQVVLYRTTEPPGTIIIQTAERHLYLIQGNGRAIRYGIGVGRAGFQ-WQGILN 101

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I R    P W  P  +I +                                        P
Sbjct: 102 ITRKAEWPDWTPPPEMIARQ---------------------------------------P 122

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                   G  N M +  +        Y +H T +P          +SGC R+ N   +
Sbjct: 123 YLPRFMAGGPGNPMGARAMYL--GTTVYRIHGTNQPDTIGT---AISSGCFRLVNADVI 176


>gi|295314766|gb|ADF97533.1| PlyM8 [uncultured phage]
          Length = 357

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
            ++     +    L L ++  +V+ L+  L  +G L     +   F    E+AVK FQ  
Sbjct: 205 AAKPTPSTVKRDYLLLDDTGAAVKTLQSELKQAGFL---LSVGGIFGKGTETAVKAFQRA 261

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+  + +   +N 
Sbjct: 262 NGLAVDGVFGTGSQAKLNA 280


>gi|291451493|ref|ZP_06590883.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
 gi|291354442|gb|EFE81344.1| peptidoglycan-binding domain 1 [Streptomyces albus J1074]
          Length = 319

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP +       G     V   +  +   G    +      F    ++AV+ FQ   GL+
Sbjct: 183 TWPTV-----RSGARGPDVHAAQHLVSHHGF---ATDPDGIFGPATQTAVQEFQTSVGLE 234

Query: 153 PSGMVDSSTLEAMNVPVD 170
            +G+V++ T   + V V 
Sbjct: 235 ATGVVNAQTWPRLVVTVR 252



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 87  DILSRGGWPE--LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            +++   WP   + +R    G+   +V+  + + +  G       +   F    + A + 
Sbjct: 237 GVVNAQTWPRLVVTVRSGDSGDRGEAVRAAQRQFVKHG---HPITVDGVFGPRTDEAARA 293

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
            Q    L   G+V   T  A+
Sbjct: 294 VQRAAKLTVDGVVGQQTWRAL 314


>gi|239979629|ref|ZP_04702153.1| putative bifunctional protein, precursor :
           N-acetylmuramoyl-L-alanine amidase; Muramoylpentapeptide
           [Streptomyces albus J1074]
          Length = 318

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP +       G     V   +  +   G    +      F    ++AV+ FQ   GL+
Sbjct: 182 TWPTV-----RSGARGPDVHAAQHLVSHHGF---ATDPDGIFGPATQTAVQEFQTSVGLE 233

Query: 153 PSGMVDSSTLEAMNVPVD 170
            +G+V++ T   + V V 
Sbjct: 234 ATGVVNAQTWPRLVVTVR 251



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 87  DILSRGGWPE--LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            +++   WP   + +R    G+   +V+  + + +  G       +   F    + A + 
Sbjct: 236 GVVNAQTWPRLVVTVRSGDSGDRGEAVRAAQRQFVKHG---HPITVDGVFGPRTDEAARA 292

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
            Q    L   G+V   T  A+
Sbjct: 293 VQRAAKLTVDGVVGQQTWRAL 313


>gi|158425962|ref|YP_001527254.1| hypothetical protein AZC_4338 [Azorhizobium caulinodans ORS 571]
 gi|158332851|dbj|BAF90336.1| uncharacterized protein [Azorhizobium caulinodans ORS 571]
          Length = 410

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 47/179 (26%), Gaps = 46/179 (25%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPI 230
                +     R             ++++ P   L  V  G   +R  + VGR D  T  
Sbjct: 246 DPSEPVPDRFRRQTVDYVTSQPAGTIVIDTPNTYLYYVLGGGKAIRYGIGVGR-DGFTWA 304

Query: 231 LHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNS 290
              +I R      W  P  +IQ+                                     
Sbjct: 305 GTEKITRKAEWADWRPPAEMIQRQ------------------------------------ 328

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
              P        G  N + +  +        Y +H T EP        F +SGC R+ N
Sbjct: 329 ---PYLPRFMAGGPGNPLGARTLYL--GGTVYRIHGTNEPQTIGK---FVSSGCFRMLN 379


>gi|163852298|ref|YP_001640341.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163663903|gb|ABY31270.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 240

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 48/199 (24%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +T  A    +  R   +     R     +       ++++  A  L  ++     +R 
Sbjct: 77  GPATRPAPEEGLIAR--TVDPRFARQVVAYDGPGRAGQIVIDTNAKYLYLIQPAGQAIRY 134

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR           I+     P W  P  ++++                        
Sbjct: 135 GIGVGRPGFV-WTGAKTISAKREWPDWTPPAEMLRRR----------------------- 170

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                           P+     + G  N + +  +   +     +H T EP        
Sbjct: 171 ----------------PDLPRHMEGGPENPLGARAMYLGTS-LYRIHGTNEPHTIGQN-- 211

Query: 338 FETSGCVRV--RNIIDLDV 354
             +SGC+R+   ++IDL  
Sbjct: 212 -VSSGCIRMMNEDVIDLYE 229


>gi|311067736|ref|YP_003972659.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus atrophaeus 1942]
 gi|310868253|gb|ADP31728.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus atrophaeus 1942]
          Length = 319

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +           V +++  L            + G+   + A   +AVK FQ+ 
Sbjct: 238 PLPSGVIKLTSPLTKGTKVIQVQRALAALYFYPDKGAKNNGVDGFYGAKTANAVKRFQLM 297

Query: 149 HGLDPSGMVDSSTLEAM 165
           +GL   G+    T   M
Sbjct: 298 NGLTADGIYGPKTKARM 314


>gi|303233179|ref|ZP_07319852.1| peptidoglycan binding domain protein [Atopobium vaginae PB189-T1-4]
 gi|302480764|gb|EFL43851.1| peptidoglycan binding domain protein [Atopobium vaginae PB189-T1-4]
          Length = 301

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           +P+  G S  +V+ ++ RL   G  +DP +  S  + +    AV  F++   L+ S  VD
Sbjct: 2   KPIQKGASGSAVEDIQNRLSRLGYVIDPQELQSQTYGSSTARAVASFRLAQQLELSEDVD 61

Query: 159 SSTLEAM 165
             T  A+
Sbjct: 62  QETWNAL 68



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 46/157 (29%), Gaps = 32/157 (20%)

Query: 30  PIHASVLDEIINESYHSI---------VNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
           PI        + +  + +            +   + +     + S           +  +
Sbjct: 3   PIQKGASGSAVEDIQNRLSRLGYVIDPQELQSQTYGSSTARAVAS----------FRLAQ 52

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGL 130
            +    + + +  W  L      LG+              V +L+  L I G        
Sbjct: 53  QLE-LSEDVDQETWNALVDESYVLGDRTLYLRLPNFHGHDVYQLQTILNILGF--SCGDA 109

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              + A+ E+AVK FQ   G    GM    T +A+  
Sbjct: 110 DSYYGAHTEAAVKEFQESQGGLADGMAFQDTFDALER 146


>gi|153010320|ref|YP_001371534.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562208|gb|ABS15705.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 249

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 42/197 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R +           V+V+ P   L  V      +R  + VGR D   
Sbjct: 74  PAVDTSKVDPKFWRQEVDYPTDEVRGTVIVDTPNKYLYHVLGNGRAMRYGIGVGR-DGFA 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I      P W  P  ++ +        +P  + +  +                 
Sbjct: 133 WAGRAKIAYKRQWPRWTPPDEMVAR----QPALEPYSIANGGM----------------- 171

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  +   R+  Y +H +PE           +SGC+R
Sbjct: 172 ------------PPGIKNPLGARAMYIHKDGRDTLYRIHGSPEAWSIGK---AVSSGCIR 216

Query: 346 V--RNIIDLDVWLLKDT 360
           +  +++IDL   +   +
Sbjct: 217 MLNQDVIDLYNNVRDGS 233


>gi|328544690|ref|YP_004304799.1| ErfK/YbiS/YcfS/YnhG family [polymorphum gilvum SL003B-26A1]
 gi|326414432|gb|ADZ71495.1| ErfK/YbiS/YcfS/YnhG family [Polymorphum gilvum SL003B-26A1]
          Length = 231

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 20/119 (16%)

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP------------GKINA 307
           R+  +Y            G  V   + +W    PP  +  + P            G  N 
Sbjct: 104 RKALRYGIGVGKAGFAWSGDAVIRMKQEWPVWRPPKEMIARRPELARYGDDGMEGGPKNP 163

Query: 308 MASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           + +  +  +  + +  Y +H T EP          +SGC+R+  +++IDL   +  +T 
Sbjct: 164 LGARALYLWQGNVDTLYRIHGTNEPSSIGKN---VSSGCIRMWHQDVIDLYARVPMNTK 219


>gi|86741674|ref|YP_482074.1| peptidoglycan binding domain-containing protein [Frankia sp. CcI3]
 gi|86568536|gb|ABD12345.1| Peptidoglycan-binding domain 1 [Frankia sp. CcI3]
          Length = 249

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V ++++RL   G       +   F       VK FQ++HGL   G+V   T   + +
Sbjct: 195 DVHQIQKRLASLGY---PISVDGKFGYQTNHMVKDFQLKHGLVVDGIVGPQTRAKLGI 249


>gi|300856612|ref|YP_003781596.1| hypothetical protein CLJU_c34530 [Clostridium ljungdahlii DSM
           13528]
 gi|300436727|gb|ADK16494.1| conserved protein [Clostridium ljungdahlii DSM 13528]
          Length = 220

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 11/132 (8%)

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPE 292
            +I+ I+    +    SII+             + +  +++ID+    +  +    +   
Sbjct: 2   RKISFILLLILFFPNASIIRAKESKKNLGILVDVTEEMLYLIDKDKNTIIRKYPVASGKS 61

Query: 293 PPNFI-----FRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV 346
                                 +  I          +H T +P          + GC+R+
Sbjct: 62  ETPSPIGTWKVVSMASWSGGFGTRWIGLNVPWGKFGIHGTNKPHSIGGE---ASHGCIRM 118

Query: 347 RN--IIDLDVWL 356
            N  + DL  ++
Sbjct: 119 LNSDVEDLYNYV 130



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 84  FYQDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +Y  I++  G P  P       L  G     V  ++ RL  +G    S  +   +   ++
Sbjct: 131 YYGMIVAVYGGPYGPFGKELRTLTPGVRGADVYEIQRRLKDAGYYCGS--MDGIYGESMK 188

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  F+  + L  S  VD +  + + +
Sbjct: 189 KCVMKFRRDNKLPESHDVDKNFYKKLRI 216


>gi|293402331|ref|ZP_06646468.1| spore cortex-lytic enzyme SleC [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304178|gb|EFE45430.1| spore cortex-lytic enzyme SleC [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 356

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGD--LDPSKGLSVAFDAYVESAVKLFQMRHG 150
           P  P   L  G+   +V  ++E L  I      +         F    E AV+ FQ +  
Sbjct: 175 PSYPGYALRRGSQGQNVFIIQELLNGIAVNYPNIPLIYPPDGIFGEVTERAVRTFQQQFN 234

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G+V  +T   ++ 
Sbjct: 235 LSVDGIVGQTTWNQISR 251



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQM 147
            G W     R L  G+  + VQ+L+  L  I     + P   +   F A +E +V+ FQ 
Sbjct: 273 TGLW---TGRVLRRGDVGIEVQQLQYFLSVIAQTYTNIPPVDIDSRFGAGLERSVRAFQR 329

Query: 148 RHGLDPSGMVDSSTLE 163
             GL   G+V   T  
Sbjct: 330 EFGLAQDGLVGQVTWN 345


>gi|227823922|ref|YP_002827895.1| conserved hypothetical protein contains ErfK/YbiS/YcfS/YnhG domain
           protein [Sinorhizobium fredii NGR234]
 gi|227342924|gb|ACP27142.1| conserved hypothetical protein contains ErfK/YbiS/YcfS/YnhG domain
           protein [Sinorhizobium fredii NGR234]
          Length = 224

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 43/184 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I +L     R     + +     ++VN P   L  V  G   +R  + VG+     
Sbjct: 58  PAIPINRLDQRFHRQIVNYDTRERPGTIVVNTPNRFLYYVLPGGKAVRYGIGVGKAGFA- 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P     K+M     +  +Y+++                    
Sbjct: 117 WEGEAYVAWKQEWPTWHPP-----KEMAERKPEVAKYVEEG------------------- 152

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCV 344
                        PG  N + +  +  ++         +H TPE           +SGC+
Sbjct: 153 -----------MGPGITNPLGARALYLFNEEGRDTLFRLHGTPEWSSIGT---AASSGCI 198

Query: 345 RVRN 348
           R+ N
Sbjct: 199 RLMN 202


>gi|149176367|ref|ZP_01854981.1| hypothetical protein PM8797T_07589 [Planctomyces maris DSM 8797]
 gi|148844719|gb|EDL59068.1| hypothetical protein PM8797T_07589 [Planctomyces maris DSM 8797]
          Length = 426

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 54/158 (34%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
            G     V++   +L    +G    R ++  G+ D  TP     +   + +P +  P  +
Sbjct: 303 KGPFNAFVDLSDFTLTIHAHGYFVRRYSIGTGK-DHSTPTGKFLVKEKLVDPTYYGPDGV 361

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           I  D                                                   N +  
Sbjct: 362 IAND------------------------------------------------DPTNPLGE 373

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             I+    ++  +H T +P         E+ GCVR+ N
Sbjct: 374 RWIDI--GDSYGIHGTIDPASIGK---AESKGCVRMLN 406


>gi|294811200|ref|ZP_06769843.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294323799|gb|EFG05442.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 332

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G+    V +L   L+  G       +   +D   E+AVK +Q       +
Sbjct: 85  PVPSFREMKPGDRGSDVLQLERNLVALGY-GGGLYVDPRYDRATEAAVKRWQKSLNRVVT 143

Query: 155 GMVDSSTL 162
           G V    +
Sbjct: 144 GRVGEGHV 151


>gi|268609046|ref|ZP_06142773.1| spore cortex-lytic enzyme, pre-pro-form [Ruminococcus flavefaciens
           FD-1]
          Length = 463

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL---SVAFDAYVESAVKLFQMRHG 150
           P      L +G++   V+ L+  L  ISG+      +      FD    +AV+ FQ   G
Sbjct: 176 PSFGGIDLAVGSAGNDVKSLQVFLNRISGNYPAIPKIPQADGIFDEATAAAVRTFQQVFG 235

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           L+ +G+V++ST   +           ++N   ++
Sbjct: 236 LETTGIVNASTWYRITYIYTSVKHIAELNSEGVR 269



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG-DLDP-- 126
            S + IA+        ++I        +    L +G  S+ V  L+  L + G   +   
Sbjct: 255 TSVKHIAELNSEGVRLEEI------SPVFTEDLKIGMQSIEVSVLQYYLAVIGAYYEAVT 308

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
              ++  F    E +VK FQ   GL  +G VD +T   +          +      +   
Sbjct: 309 PVEITGYFGEKTELSVKSFQRVFGLPQTGEVDRATRNDLYRAYQGIAEAVPPQYTAVALY 368

Query: 187 LEQKM--GLRYVLVNIPAASLEAVE 209
               +  G+    V I    L  + 
Sbjct: 369 PGTVLREGVSGSSVRIIQEYLTYIN 393



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISG--DLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S  SV+ ++E L        + PS   +  F    + +V  FQ + G+D +
Sbjct: 369 PGTVLREGVSGSSVRIIQEYLTYINRSYPNIPSVSNTGYFGPLTKQSVMAFQRQFGIDQT 428

Query: 155 GMVDSSTLEAMN 166
           G+V + T + + 
Sbjct: 429 GIVGAVTWDKIA 440


>gi|166030996|ref|ZP_02233825.1| hypothetical protein DORFOR_00677 [Dorea formicigenerans ATCC
           27755]
 gi|166029263|gb|EDR48020.1| hypothetical protein DORFOR_00677 [Dorea formicigenerans ATCC
           27755]
          Length = 419

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V++++E+L++  D  P+         F    E+AV+ FQ+  GL  +
Sbjct: 335 PGYDLSIGSTGDKVRQMQEQLLVISDAYPAIPKIDADGIFGPATEAAVRKFQLIFGLPVT 394

Query: 155 GMVDSSTLEAMN 166
           G+VD  T   ++
Sbjct: 395 GIVDYKTWYKIS 406


>gi|308174085|ref|YP_003920790.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens DSM 7]
 gi|307606949|emb|CBI43320.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens DSM 7]
 gi|328552788|gb|AEB23280.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens TA208]
 gi|328912414|gb|AEB64010.1| spore cortex-lytic enzyme [Bacillus amyloliquefaciens LL3]
          Length = 289

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PS 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ + G+    
Sbjct: 28  AFSNQVIQRGATGDDVIELQARLQYNGFY--NGKIDGVYGWTTYWAVRNFQEKFGMKAVD 85

Query: 155 GMVDSST 161
           G+V + T
Sbjct: 86  GLVGAKT 92


>gi|158318949|ref|YP_001511457.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec]
 gi|158114354|gb|ABW16551.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec]
          Length = 295

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 18/76 (23%), Gaps = 16/76 (21%)

Query: 301 DPGKINAMASTKIEFY------SRNN-----TYMHDTPEPILFNNVVRFETSGCVRVRN- 348
                                            +H T EP       R  + GC+R+ N 
Sbjct: 220 PSNPGGPYGPYAFGLSGFSTSLDSFGGRDPVIGIHGTNEPGSIG---RDVSHGCIRLSND 276

Query: 349 -IIDLDVWLLKDTPTW 363
            I  L   +   TP  
Sbjct: 277 AITRLAQTVPLGTPVE 292


>gi|299134725|ref|ZP_07027917.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298590535|gb|EFI50738.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 224

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 10/69 (14%)

Query: 287 DWNSPEPP----NFIFRQDPGKINAMASTKIEFYS--RNNTY-MHDTPEPILFNNVVRFE 339
           DW+  +              G  N M S  I  YS  ++  + +H T +P          
Sbjct: 118 DWHPTKGEIERLGVPTFVKGGPDNPMGSRAIYLYSGGKDTLFRIHGTNQPEYIGAS---I 174

Query: 340 TSGCVRVRN 348
           +SGC+R+ N
Sbjct: 175 SSGCIRMTN 183


>gi|296447403|ref|ZP_06889329.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296255106|gb|EFH02207.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 193

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       +     V+V+     L  V      +R  V VGR   +       I+     
Sbjct: 51  RETVAFTGRYAPGTVIVSTNERRLYYVLGNSQAIRYGVGVGRPGFE-WSGTRYISNKREW 109

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 110 PDWTPPSQMLRRR---------------------------------------PDLPRHMA 130

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC+R+ N
Sbjct: 131 GGVDNPLGARAMYLGGS-LYRIHGSNEPETIGQ---AVSSGCIRMTN 173


>gi|254713289|ref|ZP_05175100.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M644/93/1]
 gi|254716358|ref|ZP_05178169.1| ErfK/YbiS/YcfS/YnhG [Brucella ceti M13/05/1]
 gi|261218141|ref|ZP_05932422.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261321012|ref|ZP_05960209.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|260923230|gb|EEX89798.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261293702|gb|EEX97198.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
          Length = 186

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 6/140 (4%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           K+  +    V +           ++      Y ++P     +  + + R+  ++     +
Sbjct: 30  KIPAQYRRQVVKYATDEKPGTIIVDTREKFLYLIMPEGKAVRYGIGVGRRGFEWSGTARV 89

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPE 328
            M  E              PE   +    DPG  N + +  +  Y++       +H TPE
Sbjct: 90  AMKREWPTWTPPSATIKRQPELAKYRNGMDPGLRNPLGARALYLYNKGGDTGYRLHGTPE 149

Query: 329 PILFNNVVRFETSGCVRVRN 348
                  +   +SGC+R+ N
Sbjct: 150 WWSIGKAM---SSGCIRLMN 166


>gi|239833510|ref|ZP_04681838.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821573|gb|EEQ93142.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 249

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 42/197 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R +           V+V+ P   L  V      +R  + VGR D   
Sbjct: 74  PAVDTSKVDPKFWRQEVDYPTDEVKGTVIVDTPNKYLYHVLGNGRAMRYGIGVGR-DGFA 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I      P W  P  ++ +        +P  + +  +                 
Sbjct: 133 WAGRAKIAYKRQWPRWTPPDEMVAR----QPALEPYSIANGGM----------------- 171

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  +   R+  Y +H +PE           +SGC+R
Sbjct: 172 ------------PPGIKNPLGARAMYIHKDGRDTLYRIHGSPEAWSIGK---AVSSGCIR 216

Query: 346 V--RNIIDLDVWLLKDT 360
           +  +++IDL   +   +
Sbjct: 217 MLNQDVIDLYNNVRDGS 233


>gi|187776901|ref|ZP_02993374.1| hypothetical protein CLOSPO_00440 [Clostridium sporogenes ATCC
           15579]
 gi|187775560|gb|EDU39362.1| hypothetical protein CLOSPO_00440 [Clostridium sporogenes ATCC
           15579]
          Length = 231

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 9/74 (12%), Positives = 18/74 (24%), Gaps = 11/74 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +                   ++     +          +H T  P     
Sbjct: 68  ATGKSSTPSPIGTWKIINKGTW-------GSSFGGRWMGLNVPWGKYGIHGTDAPHSIGW 120

Query: 335 VVRFETSGCVRVRN 348
                + GC+R++N
Sbjct: 121 NS---SHGCIRMKN 131



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           RP+  G     V  +++ L               +   ++S +  FQ  + +  S  V+S
Sbjct: 162 RPIEPGMRGSDVYEVQKLLKEKKYYSGEP--DGIYGENMKSVIHKFQKDNNIPLSNTVNS 219

Query: 160 STLEAMNV 167
           S  + + V
Sbjct: 220 SFYKKLGV 227


>gi|115522564|ref|YP_779475.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516511|gb|ABJ04495.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 196

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 51/191 (26%), Gaps = 48/191 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R             ++V      L  V+ G   LR  + VGR   Q      +I R    
Sbjct: 50  RQMVFFRSNEPPGTIVVQTSERYLYLVQGGGRALRYGIGVGREGFQ-WQGLLKIARKAEW 108

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P WV P  +IQ+                                        P       
Sbjct: 109 PDWVPPPEMIQRQ---------------------------------------PYLPRFMA 129

Query: 302 PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLK 358
            G  N + +  +   S    Y +H T  P          +SGC R+ N    DL   +  
Sbjct: 130 GGPGNPLGARAMYLGS--TVYRIHGTNRPDTIGT---AISSGCFRLVNADVSDLYDRVPV 184

Query: 359 DTPTWSRYHIE 369
            T    R   E
Sbjct: 185 GTKVVVRQRPE 195


>gi|241258873|ref|YP_002978757.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863343|gb|ACS61006.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 203

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 40/141 (28%), Gaps = 9/141 (6%)

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           +           I        +  P        +A+ R+  Q+     I       +   
Sbjct: 65  QPPTGRAKGTIEIVTSEHTLIYTTPWGEQFAYPIAVGREGKQWYGSTRIVSKRAHPEWRP 124

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
              +     + P       PG  N + +  I         +H T +P          +SG
Sbjct: 125 TASM---RQKNPRLPAVVKPGPANPLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSG 177

Query: 343 CVRV--RNIIDLDVWLLKDTP 361
           C R+  +++ +L   +   T 
Sbjct: 178 CFRMYRQDVEELYEIVQPGTK 198


>gi|164519578|pdb|3BKH|A Chain A, Crystal Structure Of The Bacteriophage Phikz Lytic
           Transglycosylase, Gp144
 gi|164519579|pdb|3BKV|A Chain A, X-Ray Structure Of The Bacteriophage Phikz Lytic
           Transglycosylase, Gp144, In Complex With Chitotetraose,
           (Nag)4
          Length = 268

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V +L+  L + G           F     + V  FQ  + LD  G+V  
Sbjct: 10  KVLRKGDRGDEVCQLQTLLNLCGY--DVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGK 67

Query: 160 STLEAMNVPVDLRI 173
           +T   +       I
Sbjct: 68  NTWAELFSKYSPPI 81


>gi|29135080|ref|NP_803710.1| endolysin [Pseudomonas phage phiKZ]
 gi|18996609|gb|AAL83045.1|AF399011_144 PHIKZ144 [Pseudomonas phage phiKZ]
          Length = 260

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 2/74 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L  G+    V +L+  L + G           F     + V  FQ  + LD  G+V  
Sbjct: 2   KVLRKGDRGDEVCQLQTLLNLCGY--DVGKPDGIFGNNTFNQVVKFQKDNCLDSDGIVGK 59

Query: 160 STLEAMNVPVDLRI 173
           +T   +       I
Sbjct: 60  NTWAELFSKYSPPI 73


>gi|163736843|ref|ZP_02144261.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis BS107]
 gi|161389447|gb|EDQ13798.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis BS107]
          Length = 183

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 41/165 (24%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
           +  L  V   +   R  V VGR   +     + I      P W     +I++D       
Sbjct: 51  SYYLYYVTEPRRARRYGVGVGRAGLE-FTGTAVIQAKKEWPTWRPTPEMIERD------- 102

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN 320
                                      +     +  + Q  G  N + +  +  F +  +
Sbjct: 103 -------------------------PRSYTRFVDNKYIQPGGTDNPLGARALYLFQNGID 137

Query: 321 TY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           TY  +H T +P    +     ++GC+R+ N  I+DL   +   T 
Sbjct: 138 TYFRIHGTNQPQTIGHS---VSNGCIRMTNEHIVDLYERVPLGTV 179


>gi|291560617|emb|CBL39417.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SSC/2]
          Length = 128

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-IISG 122
               PI            I   + I   G     P   L +G+S   V++++++L  I+ 
Sbjct: 12  QGYAPIEILRYYYGESMYINTAEQI--SGIPSSWPGYDLTIGSSGDKVRQIQQQLNRIAK 69

Query: 123 DLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           D    P+  +   +     +AV+ FQ   GL  +G+VD  T 
Sbjct: 70  DYPSLPTIAVDGVYGESTANAVRKFQNVFGLPQTGIVDYPTW 111


>gi|288916828|ref|ZP_06411201.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288351713|gb|EFC85917.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 209

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +G    +V   + RL ++  L     +  AF    ++A + FQ  HGL   G+V   T
Sbjct: 142 LQVGAFGAAVATWQWRLRLA--LHRDLTVDEAFGPLTQAATRDFQSSHGLVVDGVVGPVT 199

Query: 162 LEAMN 166
              M 
Sbjct: 200 RARMR 204


>gi|225028427|ref|ZP_03717619.1| hypothetical protein EUBHAL_02701 [Eubacterium hallii DSM 3353]
 gi|224954271|gb|EEG35480.1| hypothetical protein EUBHAL_02701 [Eubacterium hallii DSM 3353]
          Length = 198

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V++++E+L +I+GD    P   +   +     ++VK+FQ    L  +
Sbjct: 114 PGYELTIGASGQKVRQMQEQLNVIAGDYPLIPKIRVDGIYGPATANSVKIFQKIFHLPET 173

Query: 155 GMVDSSTLEAMNV 167
           G+VD +T   ++ 
Sbjct: 174 GVVDFATWYKISQ 186


>gi|154247651|ref|YP_001418609.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154161736|gb|ABS68952.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 393

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L  G     ++ L++RL   G       +   +     +AV  FQ   GL  +G +
Sbjct: 220 PDDGLSKG----EIEALQQRLRDLGY-SEVGRVDGKWGPRTIAAVSAFQATSGLPVTGEL 274

Query: 158 DSSTLEAMNVP 168
           D +T  A+   
Sbjct: 275 DKATAAALTTS 285


>gi|46203539|ref|ZP_00051386.2| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 231

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 46/188 (24%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                R +     R     +       ++++  A  L  ++     +R  + VGR     
Sbjct: 77  PSAVARAIDSRFSRQVVAYDGPGRPGGIVIDTNAKFLYLIQPAGQAIRYGIGVGRPGFV- 135

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++++                                   
Sbjct: 136 WTGTKTITAKREWPDWTPPAEMLRRR---------------------------------- 161

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV-- 346
                P+       G  N + +  +   +     +H T EP          +SGC+R+  
Sbjct: 162 -----PDLPRHMAGGPGNPLGARAMYLGTS-LFRIHGTNEPHTIGQN---VSSGCIRMMN 212

Query: 347 RNIIDLDV 354
            ++IDL  
Sbjct: 213 EDVIDLYE 220


>gi|85714819|ref|ZP_01045805.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85698305|gb|EAQ36176.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 196

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 45/179 (25%), Gaps = 46/179 (25%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL     +   L         +++      L  ++     +R  + VGR   Q       
Sbjct: 43  QLDPEYRKQVVLYRTSEPPGTIIIQTAERHLYLIQGNGRAIRYGIGVGRAGFQ-WQGILN 101

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I R    P W  P  +I +                                        P
Sbjct: 102 ITRKAEWPDWTPPPEMIARQ---------------------------------------P 122

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                   G  N + +  +        Y +H T +P          +SGC R+ N   +
Sbjct: 123 YLPRFMAGGPGNPLGARAMYL--GTTVYRIHGTNQPDTIGT---AISSGCFRLVNADVI 176


>gi|319760997|ref|YP_004124934.1| peptidase c1a papain [Alicycliphilus denitrificans BC]
 gi|317115558|gb|ADU98046.1| peptidase C1A papain [Alicycliphilus denitrificans BC]
          Length = 966

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLII-SGD----LDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P   L  G+    V RLR+ L+   GD              FDA +++A++ +Q   GL
Sbjct: 1   MPTYLLRQGSQDPLVARLRKVLVAELGDAAESYPQLDKGGATFDAMLDAALRCWQNGRGL 60

Query: 152 DPSGMVDS 159
              G+V  
Sbjct: 61  IADGIVGP 68


>gi|297160931|gb|ADI10643.1| hypothetical protein SBI_07523 [Streptomyces bingchenggensis BCW-1]
          Length = 433

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L  G+S   V  L++RL     L         +D  V +AV  FQ  +G++    G+  
Sbjct: 362 VLQEGDSGSEVVELQKRLGQL--LLYLGSSDGEYDDGVRNAVTSFQNTYGVEGDPKGVYG 419

Query: 159 SSTLEAMN 166
            +T  A+ 
Sbjct: 420 PNTRRALE 427


>gi|255534894|ref|YP_003095265.1| putative phage-related protein (hydrolase) [Flavobacteriaceae
           bacterium 3519-10]
 gi|255341090|gb|ACU07203.1| putative phage-related protein (hydrolase) [Flavobacteriaceae
           bacterium 3519-10]
          Length = 273

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L +   + +V  L E L   G       +S +F A V++AVK FQ ++ L   G+V   
Sbjct: 3   TLKVKAKAPAVYTLCEMLSKLGY---PVKISDSFTAEVDAAVKDFQKKNALVVDGVVGMK 59

Query: 161 TLEAM 165
           T + +
Sbjct: 60  TWQVL 64


>gi|218531056|ref|YP_002421872.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523359|gb|ACK83944.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 240

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 48/199 (24%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +T  A    +  R   +     R     +       ++++  A  L  ++     +R 
Sbjct: 77  GPATRPAPEEGMIAR--TVDPRFARQVVAYDGPGRAGQIVIDTNAKYLYLIQPAGQAIRY 134

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR           I+     P W  P  ++++                        
Sbjct: 135 GIGVGRPGFV-WTGAKTISAKREWPDWTPPAEMLRRR----------------------- 170

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                           P+     + G  N + +  +   +     +H T EP        
Sbjct: 171 ----------------PDLPRHMEGGPENPLGARAMYLGTS-LYRIHGTNEPHTIGQN-- 211

Query: 338 FETSGCVRV--RNIIDLDV 354
             +SGC+R+   ++IDL  
Sbjct: 212 -VSSGCIRMMNEDVIDLYE 229


>gi|220932970|ref|YP_002509878.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
 gi|219994280|gb|ACL70883.1| ErfK/YbiS/YcfS/YnhG family protein [Halothermothrix orenii H 168]
          Length = 181

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 272 HMIDEKGKEVF--VEEVDWNSPEPPNFIFRQDPGKINA---MASTKIEFYSRNNTYMHDT 326
            ++   G  +      +   S   P   F+      N    + +  ++F  + +  +H T
Sbjct: 14  LILKNNGSIIATYPVAIGKPSTPTPVGDFKVLNKIKNPGGVLGTRWLQFTWQQH-GIHGT 72

Query: 327 PEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            +P L        ++GCVR+ N  + +L  ++   TP
Sbjct: 73  NKPWLIGQ---AVSNGCVRMYNRDVEELYDYVSVGTP 106


>gi|255640072|gb|ACU20327.1| unknown [Glycine max]
          Length = 305

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 20/187 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G +   +  ++      G +  +      FD  + SA+K +Q  + L+ +G  D +
Sbjct: 44  TYHPGQNYKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDIN 103

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL+ + +     +  + +N  +        +       ++P       + G   L     
Sbjct: 104 TLKQI-MTPRCGVPDIIINTNKTTSF--GMISDYTFFKDMPR-----WQAGTTQLTY--A 153

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
                R      S I R      W    +I  ++  +         +  NI ++      
Sbjct: 154 FSPEPRLDDTFKSAIAR--AFSKWTPVVNIAFQETTS--------YETANIKILFASKNH 203

Query: 281 VFVEEVD 287
                 D
Sbjct: 204 GDPYPFD 210


>gi|163852411|ref|YP_001640454.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163664016|gb|ABY31383.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 160

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 48/193 (24%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
             L   L R       +  +  ++V      L  V+ G   +R  V VGR         +
Sbjct: 7   APLDPALARTTVDFATREPVGTLVVETAERRLYLVQPGGKAMRYPVSVGRAG-LAWTGRA 65

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            I+R +  P W     +I +                                        
Sbjct: 66  EIDRKLEWPDWNPAPDMIGRH--------------------------------------- 86

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN-- 348
           P+   R + G  + + +  +      R+  Y +H T EP          +SGC+R+ N  
Sbjct: 87  PDLPSRLEGGPFSPVGARALYLAQNRRDTLYRIHGTNEPETIGQ---AVSSGCIRMLNDD 143

Query: 349 IIDLDVWLLKDTP 361
           ++DL   +   T 
Sbjct: 144 VMDLYERVPVGTK 156


>gi|115526294|ref|YP_783205.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520241|gb|ABJ08225.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 190

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 52/182 (28%), Gaps = 46/182 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R   + + +     ++V+     L  V  G   LR  + VGR D        RI      
Sbjct: 48  RETVMYDGRYAPGTIVVDTSERRLYLVMEGGRALRYGIGVGR-DGFRWGGVHRITAKKEW 106

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 107 PSWTPPAQMLRRR---------------------------------------PDLPRHMV 127

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
            G  N + +  +         +H + EP          +SGC R+ N  + DL   +   
Sbjct: 128 GGVDNPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTNEDVTDLYDRVRVG 183

Query: 360 TP 361
           TP
Sbjct: 184 TP 185


>gi|330822859|ref|YP_004386162.1| peptidase C1A papain [Alicycliphilus denitrificans K601]
 gi|329308231|gb|AEB82646.1| peptidase C1A papain [Alicycliphilus denitrificans K601]
          Length = 966

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLII-SGD----LDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           +P   L  G+    V RLR+ L+   GD              FDA +++A++ +Q   GL
Sbjct: 1   MPTYLLRQGSQDPLVARLRKVLVAELGDAAESYPQLDKGGATFDAMLDAALRCWQNGRGL 60

Query: 152 DPSGMVDS 159
              G+V  
Sbjct: 61  IADGIVGP 68


>gi|312112233|ref|YP_003990549.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
 gi|311217334|gb|ADP75938.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus sp. Y4.1MC1]
          Length = 111

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 22/106 (20%)

Query: 267 KDNNIHMIDEK----------GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
             + + + D            GK +        +                A     +   
Sbjct: 10  NKHQLKLYDGHRLIKVYPIAVGKMLTPTPSGIYTIINKQR------NPGGAFGVLWLGLS 63

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
             +   +H T  P          + GC+R+ N  +I+L   +   T
Sbjct: 64  RPH-YGIHGTNNPSSIGKN---VSRGCIRMYNHDVIELSSMVPVGT 105


>gi|229016081|ref|ZP_04173035.1| hypothetical protein bcere0030_6610 [Bacillus cereus AH1273]
 gi|229022303|ref|ZP_04178843.1| hypothetical protein bcere0029_6590 [Bacillus cereus AH1272]
 gi|228738997|gb|EEL89453.1| hypothetical protein bcere0029_6590 [Bacillus cereus AH1272]
 gi|228745230|gb|EEL95278.1| hypothetical protein bcere0030_6610 [Bacillus cereus AH1273]
          Length = 253

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|326439844|ref|ZP_08214578.1| hypothetical protein SclaA2_02210 [Streptomyces clavuligerus ATCC
           27064]
          Length = 356

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R +  G+    V +L   L+  G       +   +D   E+AVK +Q       +
Sbjct: 109 PVPSFREMKPGDRGSDVLQLERNLVALGY-GGGLYVDPRYDRATEAAVKRWQKSLNRVVT 167

Query: 155 GMVDSSTL 162
           G V    +
Sbjct: 168 GRVGEGHV 175


>gi|295318214|gb|ADF98591.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum F str. 230613]
          Length = 307

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T
Sbjct: 249 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQKDCHLVADGIVGKET 307


>gi|295396865|ref|ZP_06806993.1| carboxy-terminal processing protease CtpA [Aerococcus viridans ATCC
           11563]
 gi|294974891|gb|EFG50590.1| carboxy-terminal processing protease CtpA [Aerococcus viridans ATCC
           11563]
          Length = 523

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++S +++ +   L+  G           F     SAV   Q   GL  +G++
Sbjct: 435 TSQTYQEGDASGAIKNIEAILVALGY--QDSEADAVFAEDTTSAVLALQADQGLPETGVI 492

Query: 158 DSSTLEAMNVPVDLRIRQ 175
           D+ T  AM   +   I  
Sbjct: 493 DTETASAMISAIQALIAS 510


>gi|312438178|gb|ADQ77249.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 496

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|153940604|ref|YP_001390124.1| glycosy hydrolase family protein [Clostridium botulinum F str.
           Langeland]
 gi|152936500|gb|ABS41998.1| glycosyl hydrolase, family 25/peptidoglycan binding domain protein
           [Clostridium botulinum F str. Langeland]
          Length = 309

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G      + +++ LI  G    S G    F     +A+K FQ    L   G+V   T
Sbjct: 251 KQGARGGITKVIQQMLISIGYPVGSHGADGVFGDSTVTAIKAFQKDCHLVADGIVGKET 309


>gi|150398463|ref|YP_001328930.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150029978|gb|ABR62095.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 224

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 45/190 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I ++     R       K     ++VN P+  L  V  G   +R  + VG+     
Sbjct: 58  PGVPINRVDQRFHRQIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAVRYGIGVGKQGFA- 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P     K+M     +  +Y+                      
Sbjct: 117 WEGEAYVAWKQEWPTWHPP-----KEMAERKPEVARYVDAG------------------- 152

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCV 344
                        PG  N + +  +  +++        +H TPE           +SGC+
Sbjct: 153 -----------MGPGIGNPLGARALYLFNKEGKDTLFRLHGTPEWSSIGT---AASSGCI 198

Query: 345 RV--RNIIDL 352
           R+  ++I+DL
Sbjct: 199 RLMNQDIMDL 208


>gi|49483610|ref|YP_040834.1| protease [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257425484|ref|ZP_05601909.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428144|ref|ZP_05604542.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430776|ref|ZP_05607158.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433535|ref|ZP_05609893.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436376|ref|ZP_05612423.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282904003|ref|ZP_06311891.1| carboxyl- protease [Staphylococcus aureus subsp. aureus C160]
 gi|282905765|ref|ZP_06313620.1| ctpA-family serine protease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282908737|ref|ZP_06316555.1| peptidase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282914211|ref|ZP_06321998.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M899]
 gi|282919133|ref|ZP_06326868.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924316|ref|ZP_06331990.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C101]
 gi|283958185|ref|ZP_06375636.1| carboxyl- protease [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293501235|ref|ZP_06667086.1| ctpA serine protease [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510198|ref|ZP_06668906.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526791|ref|ZP_06671476.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M1015]
 gi|295427933|ref|ZP_06820565.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591105|ref|ZP_06949743.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus MN8]
 gi|81696485|sp|Q6GGY8|CTPAL_STAAR RecName: Full=Probable CtpA-like serine protease
 gi|49241739|emb|CAG40429.1| putative protease [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257271941|gb|EEV04079.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274985|gb|EEV06472.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278904|gb|EEV09523.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281628|gb|EEV11765.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284658|gb|EEV14778.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus M876]
 gi|282313703|gb|EFB44096.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316943|gb|EFB47317.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322279|gb|EFB52603.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M899]
 gi|282327001|gb|EFB57296.1| peptidase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331057|gb|EFB60571.1| ctpA-family serine protease [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595621|gb|EFC00585.1| carboxyl- protease [Staphylococcus aureus subsp. aureus C160]
 gi|283790334|gb|EFC29151.1| carboxyl- protease [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290920863|gb|EFD97926.1| carboxyl- protease [Staphylococcus aureus subsp. aureus M1015]
 gi|291096240|gb|EFE26501.1| ctpA serine protease [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467142|gb|EFF09660.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128291|gb|EFG57925.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575991|gb|EFH94707.1| carboxy-terminal processing protease [Staphylococcus aureus subsp.
           aureus MN8]
 gi|315195315|gb|EFU25702.1| putative protease [Staphylococcus aureus subsp. aureus CGS00]
          Length = 496

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|260462422|ref|ZP_05810630.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031916|gb|EEW33184.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 276

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 69/227 (30%), Gaps = 45/227 (19%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++    +R             ++V+     L  V  G   +R  V +GR   + 
Sbjct: 70  PAIPVDRIDPQFLRQIVPDPTGQKPGTIVVDTTGHFLYLVRPGGQAIRYGVGLGRAGFE- 128

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +I +     L+Q   Y  DN                   
Sbjct: 129 WSGDAVVQWKQKWPKWTPPDEMIARQ--PELKQ---YSADNGGM---------------- 167

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +     + +  Y +H +PE           +SGCVR
Sbjct: 168 ------------PGGLKNPLGARALYLFQGNVDTLYRLHGSPEWRSIGKS---VSSGCVR 212

Query: 346 V--RNIIDLDVWLLKDTP---TWSRYHIEEVVKTRKTTPVKLATEVP 387
           +  ++IIDL   +   +P   T           T     + +   VP
Sbjct: 213 LMNQDIIDLYDRVPSKSPVIVTSDARQPMVAAATANHKAIPIDAGVP 259


>gi|111225991|ref|YP_716785.1| N-acetylmuramoyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111153523|emb|CAJ65280.1| N-acetylmuramoyl-L-alanine amidase (Autolysin) [Frankia alni
           ACN14a]
          Length = 233

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G     V+  + R+   G       +   F     +A + FQ  HGL   G+V  +T  
Sbjct: 173 VGQDRADVRAWQTRMSQLGY---PIAVDGHFGPRSAAAARSFQGSHGLAVDGIVGPATWH 229

Query: 164 A 164
           A
Sbjct: 230 A 230


>gi|253573587|ref|ZP_04850930.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251847115|gb|EES75120.1| spore cortex-lytic enzyme [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 277

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 22/67 (32%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G     V  L+ RL   G       L   F      A+K FQ   G+   
Sbjct: 42  PAFSEQVIDYGAYGKDVYELQGRLAYLGFYH--GKLDSYFGPKTLGALKWFQSEFGMKVD 99

Query: 155 GMVDSST 161
           G+    T
Sbjct: 100 GLAGPKT 106


>gi|94986332|ref|YP_605696.1| peptidoglycan binding domain-containing protein [Deinococcus
           geothermalis DSM 11300]
 gi|94556613|gb|ABF46527.1| Peptidoglycan-binding domain 1 [Deinococcus geothermalis DSM 11300]
          Length = 251

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              +   V+ ++ RLI              +     + V+ FQ  + L  +G VD +T  
Sbjct: 176 PRMNGADVRAVQNRLIALTRPSSGGQGDGWYGPVTAATVRAFQAANALPVTGRVDRATWN 235

Query: 164 AM 165
           A+
Sbjct: 236 AL 237


>gi|282861682|ref|ZP_06270746.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282563498|gb|EFB69036.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 334

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L  G+    V  L+ RL               +   VE AV+ FQ    +     G+  
Sbjct: 259 TLRRGDQGPEVAELQRRLREK--WIYQGPDDAHYSDRVERAVREFQRWVSVGTDAPGVYG 316

Query: 159 SSTLEAMNV 167
             T +A+  
Sbjct: 317 PETRKALEA 325


>gi|149882927|ref|YP_001294864.1| endolysin [Burkholderia phage BcepNY3]
 gi|148763578|gb|ABR10561.1| endolysin [Burkholderia phage BcepNY3]
          Length = 255

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 11/86 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQSRLGL--------AQSGQFDAGVATALRQWQEAHGMTPDGVYG 53

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIK 184
           S T   M       +  +     R++
Sbjct: 54  SQTNAVMT---ARALSDIADAAARLR 76


>gi|75676672|ref|YP_319093.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74421542|gb|ABA05741.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 58/190 (30%), Gaps = 48/190 (25%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           +QL   L R +     K     ++V+     L  V      +R  V VGR D  T     
Sbjct: 174 KQLPERLRRKEVSFSTKEPAGTIVVDTSNTHLYYVLGNNRAIRYGVRVGR-DGFTWAGVQ 232

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
           +I+R    P W  P  +I++                                        
Sbjct: 233 KISRKAEWPDWHPPTEMIERQ--------------------------------------- 253

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNII 350
           P        G  N + +  +   S    Y +H T +P        F +SGC+ +   ++ 
Sbjct: 254 PYLPRFMAGGPGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGMLNEDVS 308

Query: 351 DLDVWLLKDT 360
           DL   +   T
Sbjct: 309 DLFDRVKVGT 318


>gi|302874407|ref|YP_003843040.1| SpoIID/LytB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690988|ref|ZP_07633434.1| SpoIID/LytB domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577264|gb|ADL51276.1| SpoIID/LytB domain protein [Clostridium cellulovorans 743B]
          Length = 856

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +   P+  G     V  ++  L   G       +   + +   SAV  FQ    L  +G 
Sbjct: 775 VSTLPISYGMRGTDVATIQSGLTTLGY--SPGVIDGIYGSKTYSAVINFQKSVSLKATGS 832

Query: 157 VDSSTLEAMN 166
           VD +T  AMN
Sbjct: 833 VDVTTFNAMN 842


>gi|218673364|ref|ZP_03523033.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli GR56]
          Length = 195

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 43/182 (23%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + I +++  L R +   E       ++V+ PA     V      +R  V VGR      
Sbjct: 33  QVPIDKIKPELRRQEVAYETAHAAGTIVVDTPARRAYYVLGNGRAMRYGVGVGREG-LAF 91

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + I R    P W    ++ +++                                   
Sbjct: 92  AGGAYIGRKAEWPSWTPTENMQRRE----------------------------------- 116

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + +  +      +  +  +H T +P          +SGC+R+
Sbjct: 117 -ERYRRLAGGMQGGPNNPLGARAMYLYRGGNDTHFRIHGTNQPESIG---LAMSSGCIRM 172

Query: 347 RN 348
            N
Sbjct: 173 MN 174


>gi|218510942|ref|ZP_03508820.1| hypothetical protein RetlB5_28202 [Rhizobium etli Brasil 5]
          Length = 181

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 57/185 (30%), Gaps = 42/185 (22%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A  V V    + ++    R K  L        V+++     L  VE      R  + VGR
Sbjct: 36  AQIVRVAQMPKYVKPQFKRKKVRLMTTEAAGTVIIDTNNKYLYLVEGNNRATRYGIGVGR 95

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D        +I R    P W  P  + +++                             
Sbjct: 96  -DGFGWSGIVKIGRKAEWPAWTPPAEMRRRE----------------------------- 125

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                 + +       Q+ G+ N + +  +      R+  + +H T +P      +   +
Sbjct: 126 ------AAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---S 176

Query: 341 SGCVR 345
           SGC+R
Sbjct: 177 SGCIR 181


>gi|157692794|ref|YP_001487256.1| spore cortex-lytic enzyme [Bacillus pumilus SAFR-032]
 gi|157681552|gb|ABV62696.1| spore cortex-lytic enzyme [Bacillus pumilus SAFR-032]
          Length = 303

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ ++G+    
Sbjct: 31  AFTSQVIQRGATGEDVVELQARLQYNGFY--NGKIDGVYGWGTYWAVRNFQSQYGVKKVD 88

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           G+V   T   +          +Q  L +  +               PA
Sbjct: 89  GLVGKQTKSLLVQKTKYYKDFVQQQLQKGNEFTHYGGKPLDQQTKAPA 136


>gi|114566295|ref|YP_753449.1| hypothetical protein Swol_0756 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337230|gb|ABI68078.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 204

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V  L++ L   G           F A   +AV  FQ    L   G+V   T
Sbjct: 32  LQWGSRGNAVVELQKTLNNQGFWC--GATDGIFGAKTYNAVINFQKSKKLQVDGIVGPQT 89

Query: 162 LEAMNVPVDLR 172
            +A+ +     
Sbjct: 90  KKALGLSTATP 100


>gi|282599261|ref|YP_003358573.1| hypothetical protein [Shigella phage phiSboM-AG3]
 gi|226973567|gb|ACO94320.1| conserved hypothetical phage protein [Shigella phage phiSboM-AG3]
          Length = 264

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG     V+ L++ L   G    +      F    E+AVK  Q   GL   G+V   T
Sbjct: 4   LKLGTRGSEVKSLQQSLNKIGF---TLVADGIFGKATENAVKTVQAGAGLVIDGIVGPKT 60

Query: 162 LEAMN 166
             A+ 
Sbjct: 61  SYAIR 65


>gi|332705083|ref|ZP_08425167.1| Putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332356150|gb|EGJ35606.1| Putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 238

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 12/102 (11%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGW-PELPIRPL---HLGNSSVSVQRLRERLIISGDL 124
           I    T A+  +A      I+  G     LP R L           V+ L+E L+ +   
Sbjct: 144 IFGPNTEARLNQA-----PIVGFGKTNESLPERRLSLTKPYLEGDDVRELQEALVKA--- 195

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             +  +   F    E AVK FQ    L   G+V  +T  A+ 
Sbjct: 196 TITVEVDGVFGPATEEAVKEFQKLKDLTVDGIVGPATRSALG 237


>gi|293400844|ref|ZP_06644989.1| LysM domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305870|gb|EFE47114.1| LysM domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 226

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 90  SRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            R G P        L  G+  V V  L++ L   G    ++ L  AF +   +A+  +Q 
Sbjct: 135 KRYGTPACSAGYPTLRQGSRGVYVLILQDALNALGY--STQTLDGAFGSNTRAALIAYQR 192

Query: 148 RHGLDPSGMVDSSTLEAM 165
            +GL   G+    T   +
Sbjct: 193 NNGLTADGISGCGTWTRL 210


>gi|303239713|ref|ZP_07326237.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
 gi|302592650|gb|EFL62374.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
          Length = 110

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 15/116 (12%)

Query: 251 IQKDMMALLRQDPQYLKDNNIHMID--EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + +  +   ++      DNN+        GK          +         Q        
Sbjct: 1   MYRIEIDTQKRVLTLFNDNNLVKRYPVAVGKPSTPTPPGNWTIIKKGLWGAQ-------F 53

Query: 309 ASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
               ++       Y +H T +P   +      + GCVR+ +    +L   +   TP
Sbjct: 54  GGHFMQLSVPWGIYGIHGTDKPWSISQ---AVSHGCVRMYSPDAGELYNMVPIGTP 106


>gi|257784149|ref|YP_003179366.1| Peptidoglycan-binding domain 1 protein [Atopobium parvulum DSM
           20469]
 gi|257472656|gb|ACV50775.1| Peptidoglycan-binding domain 1 protein [Atopobium parvulum DSM
           20469]
          Length = 309

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 56/151 (37%), Gaps = 18/151 (11%)

Query: 29  KPIHASVLDEIINESYHSIVNDRF--DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
            PI    +   + +    +V   +  ++   +  +   S    +++    + +  ++   
Sbjct: 2   DPITPGSIGAAVEDIQERLVKLGYTIEDDERQNHVFDKSTARAVAR---FRLDHDLS-LG 57

Query: 87  DILSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           + +    W  +      LG+              V++L+ERL I G       +   +  
Sbjct: 58  EEVDASTWAIMVDEGYELGDRTLYLRLPNFHGNDVRQLQERLNILGF--SCGKVDGHYGV 115

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + E+AVKLFQ   G    GM    TL+A+  
Sbjct: 116 HTEAAVKLFQESVGELADGMAFQDTLDAIER 146


>gi|153007818|ref|YP_001369033.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151559706|gb|ABS13204.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 264

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 42/183 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             L + ++    +R +        +  ++V+  A  L  V+ G   +R +V VGR    T
Sbjct: 87  PALDLSKIADRNLRREVDYATTEPVGTIVVDPYARYLYLVQPGGKAIRYSVGVGRAG-LT 145

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +++      P W    ++I        +++P++                       
Sbjct: 146 FKGDAKLAYKSQWPRWTPTANMI--------KRNPEHYAK-------------------- 177

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                  +    + G  N + +  +  Y   ++  Y +H T EP          +SGC+R
Sbjct: 178 -------YANGLEGGIRNPLGARALYLYRDGKDTLYRIHGTNEPWSVGK---AASSGCIR 227

Query: 346 VRN 348
           + N
Sbjct: 228 LYN 230


>gi|77164193|ref|YP_342718.1| peptidoglycan binding domain-containing protein [Nitrosococcus
           oceani ATCC 19707]
 gi|76882507|gb|ABA57188.1| Peptidoglycan-binding domain 1 [Nitrosococcus oceani ATCC 19707]
          Length = 465

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 31/108 (28%), Gaps = 3/108 (2%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLII 120
                D+     +  A+            +         +P        +V  ++ RL  
Sbjct: 183 ESARRDVDPYRSQLQAEGRNRFVRSPATTANAPASTQASKPSRP-TPDATVLAIQRRLNE 241

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            G    +      F     SA++ FQ  + +   G+   S L  +N  
Sbjct: 242 LGY--NAGTPDGLFGNKTRSAIQAFQRDNAVATDGVASRSLLSQLNAS 287


>gi|218663164|ref|ZP_03519094.1| hypothetical protein RetlI_29384 [Rhizobium etli IE4771]
          Length = 268

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 75  QFHQTYGLPVTNPVHAAMYGELRDEDFTLPSIPVSRVQPQFLRQEVDYQTTERPGTVVVD 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W  P      +M++  
Sbjct: 135 TKARFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTPPV-----EMVSRQ 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
            +   +  +N                               +PG  N + +  +      
Sbjct: 189 PEVRAFSVENGGM----------------------------NPGLQNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 221 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPAKAE 264


>gi|254439477|ref|ZP_05052971.1| ErfK/YbiS/YcfS/YnhG superfamily [Octadecabacter antarcticus 307]
 gi|198254923|gb|EDY79237.1| ErfK/YbiS/YcfS/YnhG superfamily [Octadecabacter antarcticus 307]
          Length = 184

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 7/134 (5%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
             V R+DR        +    F  YW+I   +  +  + + R       D  I +  E  
Sbjct: 35  PRVVRIDRDYATGEIHVEPSSFKLYWMIGPGLAMEYSVGIGRAGLYESGDFIIQVKKEWP 94

Query: 279 KEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNN 334
                   ++ +      +      G  N + +  +     +R+    +H T  P    +
Sbjct: 95  SWTPTPAMIERSPASYAQYADGMAGGINNPLGARALYLFSGNRDTYLRIHGTNAPRTIGS 154

Query: 335 VVRFETSGCVRVRN 348
                ++GCVR+ N
Sbjct: 155 ---AVSNGCVRLVN 165


>gi|168003279|ref|XP_001754340.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694442|gb|EDQ80790.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 861

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L+  L   G L     L+  F    + A++ FQ+  G+  +G+  SS+ +A
Sbjct: 423 GDSGPQVLDLQRALYWYGFLPKRTELTAYFGPGTKRALQQFQIAQGVPGTGVWGSSSRQA 482

Query: 165 M 165
           +
Sbjct: 483 L 483


>gi|302391221|ref|YP_003827041.1| cell wall hydrolase SleB [Acetohalobium arabaticum DSM 5501]
 gi|302203298|gb|ADL11976.1| cell wall hydrolase SleB [Acetohalobium arabaticum DSM 5501]
          Length = 234

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L  G+  V V  L+ +L + G       +   F      AV+ FQ ++ L  +G+VD
Sbjct: 41  ARDLKYGDEGVDVVFLQVQLKVLGFY--EGEIDGLFGRGTLEAVEKFQNKNDLKVNGIVD 98

Query: 159 SSTLEAMN 166
            +  + + 
Sbjct: 99  KNVYKYLE 106


>gi|149179709|ref|ZP_01858214.1| hypothetical protein BSG1_01800 [Bacillus sp. SG-1]
 gi|148851901|gb|EDL66046.1| hypothetical protein BSG1_01800 [Bacillus sp. SG-1]
          Length = 490

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L   + S  V+   E L   G           +D     AV+ FQ   GL+ +G +
Sbjct: 398 PDKELKESDLSDQVKAAEEMLKAGGY--NPGKADGFYDEQTTEAVRAFQEEEGLEVTGNL 455

Query: 158 DSSTL 162
           +S ++
Sbjct: 456 NSESI 460


>gi|332665190|ref|YP_004447978.1| peptidoglycan-binding domain 1 protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332334004|gb|AEE51105.1| Peptidoglycan-binding domain 1 protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 363

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L L +S  +V  L+  L   G       +   F     + VK FQ +H L   G+V  
Sbjct: 2   QTLKLDSSGHAVIVLQHFLKTIG---QPISVDGEFGPKTLAQVKAFQSKHKLRADGVVGP 58

Query: 160 STLE 163
            T  
Sbjct: 59  KTWS 62


>gi|255324016|ref|ZP_05365141.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           tuberculostearicum SK141]
 gi|255298873|gb|EET78165.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           tuberculostearicum SK141]
          Length = 393

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQM 147
           R L +G++SV V   R  L   G L                    +FDA +   +K FQ 
Sbjct: 3   RVLRVGDTSVRVAEARATLARLGLLSDFKGELSAWKKQKYSESDKSFDANLSEVLKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             G+ P+G +D  TL  +       +    ++     +L+   +      +       + 
Sbjct: 63  SRGIVPTGEIDDLTLRELRQ-ASYTLGSRVLSYEPANELVGDDISQLQQQLQELGFYQQR 121

Query: 208 VEN 210
           V+ 
Sbjct: 122 VDG 124



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGN 106
           F   L+       S+        +++  KA    + I+  G   +L +R L      LG+
Sbjct: 30  FKGELSAWKKQKYSESDKSFDANLSEVLKAFQQSRGIVPTGEIDDLTLRELRQASYTLGS 89

Query: 107 S-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          + +L+++L   G       +   F     +A+K +Q   GL   G
Sbjct: 90  RVLSYEPANELVGDDISQLQQQLQELGFYQQR--VDGHFGTNTHAALKEYQHNCGLQEDG 147

Query: 156 MVDSSTLEAMN 166
           +   +T+ A+ 
Sbjct: 148 VCGPATIRALG 158


>gi|2827777|sp|P29136|MEP1_SOYBN RecName: Full=Metalloendoproteinase 1; AltName: Full=SMEP1; Flags:
           Precursor
 gi|1679656|gb|AAB26959.1| metalloproteinase [Glycine max]
          Length = 305

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 58/187 (31%), Gaps = 20/187 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G +   +  ++      G +  +      FD  + SA+K +Q  + L+ +G  D +
Sbjct: 44  TYHPGQNYKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDIN 103

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           TL+ + +     +  + +N  +        +       ++P       + G   L     
Sbjct: 104 TLKQI-MTPRCGVPDIIINTNKTTSF--GMISDYTFFKDMPR-----WQAGTTQLTY--A 153

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
                R      S I R      W    +I  ++  +         +  NI ++      
Sbjct: 154 FSPEPRLDDTFKSAIAR--AFSKWTPVVNIAFQETTS--------YETANIKILFASKNH 203

Query: 281 VFVEEVD 287
                 D
Sbjct: 204 GDPYPFD 210


>gi|312898890|ref|ZP_07758278.1| NlpC/P60 family protein [Megasphaera micronuciformis F0359]
 gi|310620052|gb|EFQ03624.1| NlpC/P60 family protein [Megasphaera micronuciformis F0359]
          Length = 249

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L +    +G+    V  +++ L+  G      G+   F      AV+ FQ   GL  SG
Sbjct: 19  TLSVGAYSVGSQGSDVLLIQQNLVKRGY---KIGMDGIFGNDTRRAVERFQADKGLTISG 75

Query: 156 MVDSSTLE 163
            VD+ T +
Sbjct: 76  SVDAKTFK 83


>gi|15964840|ref|NP_385193.1| hypothetical protein SMc02636 [Sinorhizobium meliloti 1021]
 gi|15074019|emb|CAC45666.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 201

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 42/185 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
               I +++   +R +           V+++     L  V+ G + LR  + VG+   + 
Sbjct: 13  PATDISKVEPRFLRQQVPYVTHEPPGTVVIDTENRFLYLVQGGGMALRYGIGVGKAGLE- 71

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +R+ R    P W     ++ ++                                  
Sbjct: 72  FEGEARVGRKAEWPRWTPTSDMVAREP--------------------------------- 98

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       DPG  N +    +     +R+  + +H T E           +SGC+R
Sbjct: 99  --ERYGPLAGGMDPGLRNPLGPRALYLYQGNRDTLFRIHGTTEAWSIGK---AVSSGCIR 153

Query: 346 VRNII 350
           + N  
Sbjct: 154 LFNPD 158


>gi|194334671|ref|YP_002016531.1| peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312489|gb|ACF46884.1| Peptidoglycan-binding domain 1 protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 268

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 100 RPLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             L  G+     V  L+  L  +G L     +   F    + AVK  Q + GL   G+V 
Sbjct: 2   DVLKKGSRKERAVILLQIMLAEAGLLSS---VDGKFGQATDEAVKALQRQSGLVVDGIVG 58

Query: 159 SSTLEAMNVPVDLRIRQLQVNL 180
             T   + +     ++++    
Sbjct: 59  EKTWTTLFLQFPDLLQRITAKY 80


>gi|325168442|ref|YP_004280232.1| ErfK/YbiS/YcfS/YnhG family protein [Agrobacterium sp. H13-3]
 gi|325064165|gb|ADY67854.1| ErfK/YbiS/YcfS/YnhG family protein [Agrobacterium sp. H13-3]
          Length = 244

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +Q+     R + L         ++V+ P+  L  V+ G   +R  V +GR     
Sbjct: 79  PAVPYKQIDSRYYRQQVLDPTGEAPGTIVVDTPSRFLYLVQPGGTAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
              +  I      P W  P  ++ +     L +    +++  +                 
Sbjct: 138 WRGNGVIQWRQKWPRWKPPNEMVARQ--PELAK--YSIENGGME---------------- 177

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +      R+  Y +H  P+           +SGCVR
Sbjct: 178 -------------PGLKNPLGARALYIFAGGRDTLYRLHGNPQWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LLNQDIIDLYERVPIKAP 239


>gi|90419247|ref|ZP_01227157.1| ErfK/YbiS/YcfS/YnhG [Aurantimonas manganoxydans SI85-9A1]
 gi|90336184|gb|EAS49925.1| ErfK/YbiS/YcfS/YnhG [Aurantimonas manganoxydans SI85-9A1]
          Length = 183

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 24/112 (21%)

Query: 264 QYLKDNNIHM----IDEKGKEVFVEEVDWNSPEPPNFIFRQDPG------------KINA 307
            + +   I +    +   G+ V   + +W    P   + +++PG              N 
Sbjct: 64  GFARRYGIGVGRAGLSFSGQAVVGRKAEWPRWTPTPNMIKREPGKYAKYAGGLKGGPGNP 123

Query: 308 MASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           + +  +  +   ++  Y +H T EP          ++GC+R+   ++IDL  
Sbjct: 124 LGARALYLHRNGQDTLYRIHGTTEPSSIGK---AVSNGCIRMLNEHVIDLYD 172


>gi|46205539|ref|ZP_00048410.2| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 158

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 43/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V+     L  V      +R  V VG+  +Q     + I+   + P W  PR + +   
Sbjct: 29  IVVSTSERRLYLVNGDGTAIRYPVAVGKPGKQ-WSGATEIDGKYYQPDWSPPREVKRD-- 85

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                P      +     N M +  +  
Sbjct: 86  ------------------------------------NPRLPNLIRGGSPSNPMGAAAMTL 109

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                  +H T  P        + + GC+R+ N
Sbjct: 110 RGGE-YAIHGTNRPSSIGT---YASYGCIRMYN 138


>gi|307328741|ref|ZP_07607913.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306885690|gb|EFN16704.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 350

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 95  PELPIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P  P  P  L  G+S   V  L++RL     L         +D  V   V  +Q +H + 
Sbjct: 271 PPGPTGPPALREGDSGPEVAELQKRLSQL--LLYIGAADGDYDGGVRRVVSSYQDQHDIT 328

Query: 153 --PSGMVDSSTLEAMN 166
             P G+   +T   + 
Sbjct: 329 GDPDGVYGENTRRDLE 344


>gi|254562044|ref|YP_003069139.1| hypothetical protein METDI3649 [Methylobacterium extorquens DM4]
 gi|254269322|emb|CAX25288.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 240

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 52/191 (27%), Gaps = 46/191 (24%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
             +T  A    +  R    +    R     +       ++++  A  L  ++     +R 
Sbjct: 77  GPATRPAPEEGMIARAVDPR--FARQVVAYDGPGRAGQIVIDTNAKYLYLIQPAGQAIRY 134

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            + VGR           I+     P W  P  ++++                        
Sbjct: 135 GIGVGRPGFV-WTGAKTISAKREWPDWTPPAEMLRRR----------------------- 170

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
                           P+       G  N + +  +   +     +H T EP        
Sbjct: 171 ----------------PDLPRHMVGGPENPLGARAMYLGTS-LYRIHGTNEPHTIGQN-- 211

Query: 338 FETSGCVRVRN 348
             +SGC+R+ N
Sbjct: 212 -VSSGCIRMMN 221


>gi|254511097|ref|ZP_05123164.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534808|gb|EEE37796.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 184

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPI 330
                + +  + V +   +  ++   Q  G  N + +  +  F +  +TY  +H T +P 
Sbjct: 93  WRPTDEMIERDPVAYARFKDNDY--VQPGGSDNPLGARALYLFQNGVDTYFRIHGTTQPQ 150

Query: 331 LFNNVVRFETSGCVRVRNI 349
              +     ++GC+R+ N 
Sbjct: 151 TIGH---AASNGCIRMLNA 166


>gi|13474433|ref|NP_106001.1| hypothetical protein mlr5313 [Mesorhizobium loti MAFF303099]
 gi|14025186|dbj|BAB51787.1| mlr5313 [Mesorhizobium loti MAFF303099]
          Length = 205

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 45/197 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +A      + I ++     R +   + K     ++V+     L  VE+    +R  + VG
Sbjct: 38  DAGYQLPRVPIEKVPRQFHRQEVNYDTKEKPGTIIVDTQNKFLYFVEDDGRAIRYGIGVG 97

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R   +     + I      P W  PR +I++     L +                     
Sbjct: 98  REGFE-WHGTAHIALKREWPTWTPPREMIKRQ--PELAK--------------------- 133

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFE 339
                        F    +PG  N + +  +  +++       +H +PE       +   
Sbjct: 134 -------------FADGMEPGLKNPLGARAMYLFNKGGDMGYRLHGSPEWNSIGKAM--- 177

Query: 340 TSGCVRV--RNIIDLDV 354
           +SGC+R+  ++IIDL  
Sbjct: 178 SSGCIRLMNQDIIDLYD 194


>gi|239627635|ref|ZP_04670666.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517781|gb|EEQ57647.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 420

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L LG++   V++++E+L  I +     P       +      AV+ FQ   GL  +
Sbjct: 336 PGNDLTLGSTGDKVRQMQEQLDMIATVYTAIPRVTPDGIYGPRTADAVREFQSIFGLPQT 395

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 396 GVVDFATWYRIS 407


>gi|170738736|ref|YP_001767391.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168193010|gb|ACA14957.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 194

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 21/144 (14%)

Query: 236 NRIMFNPYWVIPRSIIQKDMMALL------RQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ +P    P +I+ +     L      R+  +Y            G      +  W 
Sbjct: 50  RYLIDDPTGEPPGTIVVETRERQLYFVLPERKAIRYGVTVGDEAYGWTGTARVFRKAAWP 109

Query: 290 SPEPPNFIFRQDP-------GKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFE 339
              PP  + R+ P       G  N + +  +       +  Y +H T EP          
Sbjct: 110 DWNPPAEMVRRWPHVHPMKGGPANPLGARALYLADGARDTLYRIHGTNEPERIGQ---AA 166

Query: 340 TSGCVRVRNII--DLDVWLLKDTP 361
           +SGC+R+RNI   DL   +  D  
Sbjct: 167 SSGCIRMRNIDVVDLSNRVASDAK 190


>gi|4336674|gb|AAD17887.1| ATP synthase subunit [Bradyrhizobium japonicum]
          Length = 93

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 293 PPNFIFRQD-------PGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCV 344
           PP  I RQ         G  N + +  +        Y +H T  P          +SGC+
Sbjct: 2   PPEMIVRQPYLPRHMAGGPGNPLGARAMYL--GGTIYRIHGTNAPDTIGK---HVSSGCI 56

Query: 345 RVRN 348
           R+ N
Sbjct: 57  RLTN 60


>gi|308173925|ref|YP_003920630.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           DSM 7]
 gi|307606789|emb|CBI43160.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           DSM 7]
 gi|328553148|gb|AEB23640.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           TA208]
 gi|328912078|gb|AEB63674.1| carboxy-terminal processing protease [Bacillus amyloliquefaciens
           LL3]
          Length = 468

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+S  +V   ++ L   G    S  ++  +D   E AVK FQ +  L  +G++
Sbjct: 376 AEKTYQYGDSGTTVTNAQKMLEALGY---SVNVNGTYDKAFEQAVKQFQAKEKLKETGIL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIK 184
              T   +   +     QL  N  ++K
Sbjct: 433 TGDTTAKLMTDLQK---QLADNDTQMK 456


>gi|163745853|ref|ZP_02153212.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|161380598|gb|EDQ05008.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 195

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/188 (10%), Positives = 48/188 (25%), Gaps = 46/188 (24%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLRSTVI 220
            A     +  + +   +    +       +G   ++ +  + +L     +G+        
Sbjct: 33  SAREFSNEAPVSRNASSFATQRWQDHFDSLGQGAIVADTISRALHYWSADGQTYKVYPTS 92

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V   +  T   ++ I R    P W    S++++                           
Sbjct: 93  VPATEELTKRGYTEIVRKKEGPDWTPTASMMER--------------------------- 125

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                                PG  N + +  +         +H T +        R  +
Sbjct: 126 -------------FPHYKYMPPGPDNPLGTHAMYLSWPAYI-IHGTHDTRKIG---RRSS 168

Query: 341 SGCVRVRN 348
            GC+ + N
Sbjct: 169 DGCIGLYN 176


>gi|15891603|ref|NP_357275.1| hypothetical protein Atu3331 [Agrobacterium tumefaciens str. C58]
 gi|15160041|gb|AAK90060.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 261

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++  +++    +R             ++V+     L         +R  V +GR   + 
Sbjct: 60  PEIPYKRIPRQFLRQMVPNPTGERPGVIVVDTANHFLYLTYEDGQAMRYGVGLGRAGFE- 118

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  +I +     L   P   ++  +                 
Sbjct: 119 WAGRGVIQYKRQWPRWTPPDEMIARQ--PELE--PYSGRNGGME---------------- 158

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +      ++  Y +H +PE           +SGCVR
Sbjct: 159 -------------PGLKNPLGARALYIFKDGKDTIYRLHGSPEWWTIGKS---VSSGCVR 202

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++I+DL   +   TP
Sbjct: 203 LLNQDIVDLYSRVPDGTP 220


>gi|302872715|ref|YP_003841351.1| carboxyl-terminal protease [Caldicellulosiruptor obsidiansis OB47]
 gi|302575574|gb|ADL43365.1| carboxyl-terminal protease [Caldicellulosiruptor obsidiansis OB47]
          Length = 472

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +AVK FQ  + L PSG++
Sbjct: 380 ATKKFKNGDMDLEVLAAQQRLFYLGYLSSWTA---KMDDSTVAAVKKFQKDNKLYPSGVL 436

Query: 158 DSSTLEAMN 166
           D +T + +N
Sbjct: 437 DITTQKKLN 445


>gi|257055214|ref|YP_003133046.1| metalloendopeptidase-like membrane protein [Saccharomonospora
           viridis DSM 43017]
 gi|256585086|gb|ACU96219.1| metalloendopeptidase-like membrane protein [Saccharomonospora
           viridis DSM 43017]
          Length = 323

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +    WP+L    L  G     V+ L+  L           +   F     SAV+ FQ  
Sbjct: 249 VGAATWPKLIYE-LRQGARGNHVRALQTALNKR---SAGILVDGDFGPATNSAVRTFQSV 304

Query: 149 HGLDPSGMVDSSTLEAM 165
           + L   G+    T  A+
Sbjct: 305 NRLVVDGLAGPYTWRAL 321


>gi|218663163|ref|ZP_03519093.1| hypothetical protein RetlI_29379 [Rhizobium etli IE4771]
          Length = 244

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R + +         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEEIDPRYYRQRVIDPTGQPPGTIVVDTPSRFLYLVQADGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              E V +
Sbjct: 138 WQGSGVIQWRQKWPRWKPPNEMVARQ----------------------------PELVKY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
           +           +PG  N + +  +  F +  +  Y +H  P+           +SGCVR
Sbjct: 170 SIENGGM-----EPGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVR 221

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +    P
Sbjct: 222 LLNQDIIDLYDRVPTKAP 239


>gi|86356807|ref|YP_468699.1| hypothetical protein RHE_CH01167 [Rhizobium etli CFN 42]
 gi|86280909|gb|ABC89972.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 268

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+V+
Sbjct: 75  QFHQTYGLPVTNPLHMAMYGELRDEDFTLPAIPVSRVQPQFLRQEVDYQTIERPGTVVVD 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W  P      +M++  
Sbjct: 135 TKARFLYFVEPNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTPPV-----EMVSRQ 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
            +   +  +N                               +PG  N + +  +      
Sbjct: 189 PEVRAFSAENGGM----------------------------NPGLQNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  ++++DL   L     
Sbjct: 221 QDTLYRIHGTPDWQSIGK---ATSSGCVRMLNQDVVDLYDRLPAKAE 264


>gi|56421627|ref|YP_148945.1| carboxyl-terminal processing protease [Geobacillus kaustophilus
           HTA426]
 gi|56381469|dbj|BAD77377.1| carboxyl-terminal processing protease [Geobacillus kaustophilus
           HTA426]
          Length = 482

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL    +   +   ++ L   G           F    E AV+ FQ  + L  +G +D 
Sbjct: 392 KPLRYDMNDEQIANAQKMLKGLGF--NPGRTDGYFSKETEQAVQAFQKANQLPVTGRIDE 449

Query: 160 STLEAMNVPVDLRIR 174
           +T +A+   +   +R
Sbjct: 450 ATADALQTKIMEAVR 464


>gi|134299121|ref|YP_001112617.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
 gi|134051821|gb|ABO49792.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
          Length = 294

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 20/129 (15%)

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I     N        ++ K       +   +  + N  +I++                PP
Sbjct: 20  IINKKTNQLGFYEDGLLSKVFPVATGRQRSFTPEGNFRVINK-------------QLNPP 66

Query: 295 NFIFRQDPG-KINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +      G   N +    +   +      +H    P        + ++GC+R+ N   L
Sbjct: 67  YYKKNIPGGSPYNPLGPRWLGLSAPGGPYGIHGNSNPASIGT---YASNGCIRLFNNDIL 123

Query: 353 DVWLLKDTP 361
             WL +  P
Sbjct: 124 --WLYEQVP 130


>gi|168184550|ref|ZP_02619214.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
 gi|237795281|ref|YP_002862833.1| peptidoglycan-binding domain 1 [Clostridium botulinum Ba4 str. 657]
 gi|182672321|gb|EDT84282.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum Bf]
 gi|229262124|gb|ACQ53157.1| peptidoglycan-binding domain 1 [Clostridium botulinum Ba4 str. 657]
          Length = 281

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 3/96 (3%)

Query: 68  PIISKETIAQTEKAI-AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           P  SK      +  +       +SR  +  LP      G      + +++ LI  G    
Sbjct: 180 PSTSKPVQTNKKHPLINQLYAEMSRQDFNTLP--TCRQGARGNITKTIQQMLINIGYPVG 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S G    F     +A+K  Q    L   G+V   T 
Sbjct: 238 SYGADRVFGNGTVTAIKALQRDCNLSVDGVVGKETW 273


>gi|146342579|ref|YP_001207627.1| hypothetical protein BRADO5742 [Bradyrhizobium sp. ORS278]
 gi|146195385|emb|CAL79410.1| conserved hypothetical protein; putative exported protein
           [Bradyrhizobium sp. ORS278]
          Length = 413

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 56/185 (30%), Gaps = 48/185 (25%)

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           NL R +     K     ++V+ P   L  V      LR  V VGR    T     +I + 
Sbjct: 217 NLRRQEVDFVTKEPPGTIVVDTPNTYLYLVLGNGRALRYGVRVGREG-FTWTGVQKITKK 275

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
              P W  P  +I++                                        P    
Sbjct: 276 TEWPDWYPPSEMIERQ---------------------------------------PYLPR 296

Query: 299 RQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
               G+ N + +  +   S    Y +H T +P        F +SGC+ + N  + DL   
Sbjct: 297 FMAGGEGNPLGARAMYLGS--TVYRIHGTNQPSTIGK---FVSSGCIGMLNDDVSDLFDR 351

Query: 356 LLKDT 360
           +   T
Sbjct: 352 VKVGT 356


>gi|92116373|ref|YP_576102.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91799267|gb|ABE61642.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 249

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 59/214 (27%), Gaps = 59/214 (27%)

Query: 150 GLDPSGMVDSSTLEAMNVP-VDLRIRQLQVNLMRIKKLLEQKMGL---RYVLVNIP---- 201
           GL  SG + ++  EA N      R ++L   +  +K  +          Y     P    
Sbjct: 38  GLMLSGCMQATHYEATNTSNFTPRDKELLSKVSYVKTPVAAPFRRAIVDYHRKETPGSIM 97

Query: 202 ----AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
                  L  V +G   +R  + VG          +++      P W      I +  + 
Sbjct: 98  VDSDNHYLYYVLDGGKAIRYGITVGEEA-MAWSGIAKVGAKTEWPSWHPTPGEIARLGVP 156

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-- 315
                                                       PG  N M S  +    
Sbjct: 157 KY----------------------------------------VAPGPDNPMGSRALYLYA 176

Query: 316 YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             ++  + +H T +P          +SGC+R+ N
Sbjct: 177 NGKDTLFRIHGTNQPEYIGAS---ISSGCIRMTN 207


>gi|323704753|ref|ZP_08116330.1| carboxyl-terminal protease [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535679|gb|EGB25453.1| carboxyl-terminal protease [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 453

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G++  +V+ L+  L + G        +  F      A+  FQ   G+  +G++D  T+
Sbjct: 369 KKGDTGYNVKLLQSYLSLLGYYKGEP--NGYFGNDTYDALISFQKYAGIPATGVMDRGTV 426

Query: 163 EAMN 166
           +A++
Sbjct: 427 DALS 430


>gi|298492059|ref|YP_003722236.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298233977|gb|ADI65113.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 182

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 39/89 (43%), Gaps = 9/89 (10%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           ++ +  Y     +       +  L  G++ +SV+ ++  L+ +G       +   F    
Sbjct: 103 QQLLTRYPAYGQQ------AMPTLLFGSAGMSVRIMQRLLVSNGY---GVRVDGIFGPLT 153

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+A+K FQ +H L   G+V   T   +++
Sbjct: 154 EAAIKAFQNQHNLFVDGIVGQKTWWELSI 182


>gi|115522535|ref|YP_779446.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115516482|gb|ABJ04466.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 171

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 41/160 (25%), Gaps = 45/160 (28%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                 ++V      L  V      +R  V VG+  +Q     ++I+     P W  P  
Sbjct: 35  DYSPGTIVVKTAERRLYLVVEEGRAVRYPVGVGKPGKQ-WAGVTKIDGKYREPAWAPPAD 93

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAM 308
           + +                                       + PN       G   N M
Sbjct: 94  VKR---------------------------------------DNPNIPNVIPGGSPANPM 114

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +         +H T  P        F + GCVR+ N
Sbjct: 115 GVAAMTLAGGE-YAIHGTNRPSSIG---GFVSYGCVRMLN 150


>gi|329934357|ref|ZP_08284436.1| hypothetical protein SGM_0148 [Streptomyces griseoaurantiacus M045]
 gi|329305953|gb|EGG49808.1| hypothetical protein SGM_0148 [Streptomyces griseoaurantiacus M045]
          Length = 282

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V   +  L  +G      G+   F      AV+  Q R GL   G V   T +A
Sbjct: 222 GSTGPEVAEAQCLLRRAG--ISPGGIDGIFGPLTRRAVRAMQQRSGLAVDGRVGPHTWKA 279

Query: 165 MN 166
           + 
Sbjct: 280 LR 281


>gi|306844000|ref|ZP_07476595.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
 gi|306275755|gb|EFM57479.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
          Length = 230

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 72/218 (33%), Gaps = 19/218 (8%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G V  +   A  V  + ++ +   N+ ++      K           A +     N    
Sbjct: 17  GAVAPA-FAASPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKA 71

Query: 215 LRSTVIV-GRVDRQTPILHSRINRIMFNPYW----VIPRSIIQKDMMALLRQDPQYLKDN 269
            + ++    R    T   +     ++         V   +  ++  +A+ +Q  ++    
Sbjct: 72  NKYSIDPKFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTARRYGIAVGKQGLEFQGKA 131

Query: 270 NIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHD 325
            I    E  + +   E ++ +      F    D G  N + S  +  +  N      +H 
Sbjct: 132 TISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHG 191

Query: 326 TPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           T +P    +     ++GC R+   +++DL   +   T 
Sbjct: 192 TVQPWTIGSS---ASNGCFRMINEDVMDLYDRVTLGTE 226


>gi|298493157|ref|YP_003723334.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298235075|gb|ADI66211.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 358

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q I +      + +  L  G     V+ ++ +L   G    +  +   + +  ++AV  F
Sbjct: 35  QAITATPKSAPIQLMVLSPGVRGAEVEVIQVQLKALGYY--NDLIDGQYGSSTQNAVTRF 92

Query: 146 QMRHGLDP-SGMVDSSTLEAMNVPVDLRIR 174
           Q   G     G+   ST + +   +  RI+
Sbjct: 93  QQEQGFKKADGIAYESTRQHLQEVLSRRIK 122


>gi|114707262|ref|ZP_01440160.1| hypothetical protein FP2506_05126 [Fulvimarina pelagi HTCC2506]
 gi|114537458|gb|EAU40584.1| hypothetical protein FP2506_05126 [Fulvimarina pelagi HTCC2506]
          Length = 230

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 65/199 (32%), Gaps = 45/199 (22%)

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           VP       +  N+ R      ++     ++V+     L  VE G +  R  + VG+   
Sbjct: 56  VPAIPASVLMDRNVRREVLWTGKEKPGT-IVVDPENHYLFLVEEGGIARRYAIGVGKEGF 114

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
                 + + R    P W    ++I++D                    D  G+       
Sbjct: 115 A-FSGTTTVKRKADWPGWTPTDNMIRRDP-------------------DRYGQ------- 147

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGC 343
                    F      G  N + +  +  Y         +H T EP      +   +SGC
Sbjct: 148 ---------FAGGVPGGLNNPLGARALYLYRGGRDTHFRIHGTNEPHTVGRSM---SSGC 195

Query: 344 VRV--RNIIDLDVWLLKDT 360
           +R+  +++IDL+  +   T
Sbjct: 196 IRMMNQDVIDLEDRVPIGT 214


>gi|295696531|ref|YP_003589769.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
 gi|295412133|gb|ADG06625.1| spore cortex-lytic enzyme [Bacillus tusciae DSM 2912]
          Length = 239

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 15/168 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+  V V  L+ RL           +   F      AV+ FQ   GL   G+   +T  A
Sbjct: 39  GSRGVDVTELQGRLRYVNYYH--GAIDGVFGWQTYWAVRNFQRDVGLRVDGIAGPATKAA 96

Query: 165 -MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            +      R    Q +      +         +L  +                + V++ R
Sbjct: 97  LVQRSRGYRPAPAQTSASPATGVGRFSARDIDLLTRVVYGEARGEPYTGQVAVAAVVLNR 156

Query: 224 VDRQTPILHSRINRIMFNPY----------WVIPRSIIQKDMMALLRQ 261
           ++   P     I  ++F P           W+ P S  +K ++  +R 
Sbjct: 157 LE--DPRFPHTIPGVIFQPGAFTAVSDGQIWLTPDSEARKAVLDAIRG 202


>gi|295401784|ref|ZP_06811749.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976151|gb|EFG51764.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 111

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 6/60 (10%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
               A     +     +   +H T  P          + GC+R+ N  +I+L   +   T
Sbjct: 50  NPGGAFGVLWLGLSRPH-YGIHGTNNPSSIGKN---VSRGCIRMYNHDVIELSSMVPVGT 105


>gi|302876620|ref|YP_003845253.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
 gi|307687294|ref|ZP_07629740.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
 gi|302579477|gb|ADL53489.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Clostridium cellulovorans 743B]
          Length = 339

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +   WP      L  G+S V+V  L+    +  +      +   F     +AVK FQ   
Sbjct: 31  AAITWPT-----LQHGSSGVNVYALQ---YLLNNQSAGITVDGTFGPGTTTAVKNFQTSK 82

Query: 150 GLDPSGMVDSSTLEAMNVPVDL 171
           GL   G+V  +T   + V    
Sbjct: 83  GLTSDGIVGQNTWSKLCVTTQQ 104



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 3/87 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I+ +  W +L +     G+++ +V+ ++  L        S  +   F +   SAV  FQ
Sbjct: 88  GIVGQNTWSKLCVTT-QQGSNNNAVKAVQYLLK--NKYSLSLTVDGIFGSGTYSAVVAFQ 144

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRI 173
              GL  +G+VD +T   +       I
Sbjct: 145 KAKGLTQNGIVDLNTWNYLIGSSSQVI 171


>gi|225571095|ref|ZP_03780112.1| hypothetical protein CLOHYLEM_07195 [Clostridium hylemonae DSM
           15053]
 gi|225160176|gb|EEG72795.1| hypothetical protein CLOHYLEM_07195 [Clostridium hylemonae DSM
           15053]
          Length = 262

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +       L+ERL   G       +        ++A+K +Q  HGL   G+V   T  
Sbjct: 201 SRGNITALLQERLNALGY--NCGVVDGINGTKTQAAIKAYQRAHGLVADGIVGVKTWS 256


>gi|218900180|ref|YP_002448591.1| hypothetical protein BCG9842_B0072 [Bacillus cereus G9842]
 gi|228968143|ref|ZP_04129147.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|218542911|gb|ACK95305.1| conserved hypothetical protein [Bacillus cereus G9842]
 gi|228791578|gb|EEM39176.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 153

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  ++GK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMYNND--IHWLFER 143


>gi|323136809|ref|ZP_08071890.1| Peptidoglycan-binding domain 1 protein [Methylocystis sp. ATCC
           49242]
 gi|322398126|gb|EFY00647.1| Peptidoglycan-binding domain 1 protein [Methylocystis sp. ATCC
           49242]
          Length = 155

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 19/151 (12%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLA--------RVDMGIDSDIPIISKETIAQTEKAI 82
           I      + + ++  +++   + +            +   +   +   + E  A      
Sbjct: 6   IKLGSKGDAVKKAQRALIERYYLDPGMDDGVFGPVTLSKVLRYQLDRSATEFFAF--SFP 63

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL--IISGDLDPSKGLSVAFDAYVES 140
                I+    W  L    +  G+    V+ L+  L      + DP   +   F    E+
Sbjct: 64  LKVDGIIGPATWFRLAPAEVKKGSKGAGVRLLQGILKSFAVPEYDPGA-VDGDFGPTTET 122

Query: 141 AVKLFQMRHG------LDPSGMVDSSTLEAM 165
           AVK FQ          L   G+V + T  A+
Sbjct: 123 AVKAFQADFFDFDGNPLKVDGIVGAKTWAAL 153



 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 43/147 (29%), Gaps = 24/147 (16%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG----------L 151
           + LG+   +V++ +  LI    LDP       F     S V  +Q+             L
Sbjct: 6   IKLGSKGDAVKKAQRALIERYYLDP-GMDDGVFGPVTLSKVLRYQLDRSATEFFAFSFPL 64

Query: 152 DPSGMVDSSTL--------EAMNVPVDLRIRQLQVN----LMRIKKLLEQKMGLRYVLVN 199
              G++  +T         +  +    +R+ Q  +            ++   G       
Sbjct: 65  KVDGIIGPATWFRLAPAEVKKGSKGAGVRLLQGILKSFAVPEYDPGAVDGDFGPTTETAV 124

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDR 226
                 +  +     L+   IVG    
Sbjct: 125 KA-FQADFFDFDGNPLKVDGIVGAKTW 150


>gi|158423984|ref|YP_001525276.1| hypothetical protein AZC_2360 [Azorhizobium caulinodans ORS 571]
 gi|158330873|dbj|BAF88358.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 228

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 4/83 (4%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
            + + +  +  K +       +      P+       G  N + +  +   S     +H 
Sbjct: 130 FQWSGVKTVSAKKEWPSWTPPEQMLKRRPDLPRYMPGGIENPLGARAMYLGSS-LYRIHG 188

Query: 326 TPEPILFNNVVRFETSGCVRVRN 348
           + EP          +SGC+R+ N
Sbjct: 189 SNEPETIGQ---AVSSGCIRMTN 208


>gi|327190700|gb|EGE57782.1| hypothetical protein RHECNPAF_397006 [Rhizobium etli CNPAF512]
          Length = 244

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 65/199 (32%), Gaps = 44/199 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R + +         ++V+ P+  L  V+   + +R  V +GR     
Sbjct: 79  PAVPYEEIDPRYYRQRVVDPTGQPPGTIVVDTPSRFLYLVQADGMAMRYGVGIGREGFA- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY-LKDNNIHMIDEKGKEVFVEEVD 287
                 I      P W  P      +M+A   +  +Y + +  +                
Sbjct: 138 WQGSGVIQWRQKWPRWKPP-----NEMVARQPELVKYSIDNGGME--------------- 177

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCV 344
                         PG  N + +  +  F +  +  Y +H  P+           +SGCV
Sbjct: 178 --------------PGLKNPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCV 220

Query: 345 RV--RNIIDLDVWLLKDTP 361
           R+  ++IIDL   +    P
Sbjct: 221 RLMNQDIIDLYDRVPTKAP 239


>gi|253998677|ref|YP_003050740.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4]
 gi|253985356|gb|ACT50213.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. SIP3-4]
          Length = 164

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
           N +         +   Y+H TP+  L        + GCVR+RN  +I L   +   TP W
Sbjct: 103 NRLGQVD---SMQRYIYIHGTPDTELMGV---AASHGCVRMRNTDVIALFDLVPVGTPVW 156

Query: 364 SRYH 367
               
Sbjct: 157 LEDD 160


>gi|75760137|ref|ZP_00740197.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228903531|ref|ZP_04067654.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis IBL 4222]
 gi|74492374|gb|EAO55530.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856107|gb|EEN00644.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis IBL 4222]
          Length = 153

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 37/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  ++GK      V  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQDGKFIKSFAVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMYNND--IHWLFER 143


>gi|328543239|ref|YP_004303348.1| Lipoprotein [polymorphum gilvum SL003B-26A1]
 gi|326412985|gb|ADZ70048.1| Lipoprotein, putative [Polymorphum gilvum SL003B-26A1]
          Length = 176

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 61/197 (30%), Gaps = 45/197 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + +R++     R             ++V+ P   L     G   LR  V +GR D   
Sbjct: 13  PAVDLRKIDPRYYRQIVPYYSAEPTGTIIVDTPHRFLYLTMEGGQALRYGVGIGR-DGFA 71

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +RI      P W  P  +I +                                   
Sbjct: 72  WGGTARIAYKREWPVWTPPTEMIAR----------------------------------- 96

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
             PE   +     PG  N + +  +     +R+  Y +H T E           +SGCVR
Sbjct: 97  -QPELEPYRNGMPPGLDNPLGARALYIFEGNRDTLYRLHGTSEFWSIGK---AVSSGCVR 152

Query: 346 V--RNIIDLDVWLLKDT 360
           +  +++IDL   +   T
Sbjct: 153 LLHQDVIDLHDRVPNGT 169


>gi|300785514|ref|YP_003765805.1| muramoyl-pentapeptide carboxypeptidase [Amycolatopsis mediterranei
           U32]
 gi|299795028|gb|ADJ45403.1| putative muramoyl-pentapeptide carboxypeptidase [Amycolatopsis
           mediterranei U32]
          Length = 242

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLI---ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            R L  G++   V  L+ R+              +   F +   +AV+ FQ  +GL    
Sbjct: 34  SRTLKEGSTGADVTELQIRVAGWAADHAAQSRVSIDGEFGSGTAAAVRRFQAAYGLGADA 93

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
            V  +T  A+N         +  N     
Sbjct: 94  QVGPATQAALNALEQSDGSTVHFNFSEFT 122


>gi|194016960|ref|ZP_03055573.1| spore cortex-lytic enzyme [Bacillus pumilus ATCC 7061]
 gi|194011566|gb|EDW21135.1| spore cortex-lytic enzyme [Bacillus pumilus ATCC 7061]
          Length = 303

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 3/108 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-S 154
               + +  G +   V  L+ RL  +G    +  +   +      AV+ FQ ++G+    
Sbjct: 31  AFTSQVIQRGATGEDVVELQARLQYNGFY--NGKIDGVYGWGTYWAVRNFQSQYGVKKVD 88

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
           G+V   T   +          +Q  L +  +               PA
Sbjct: 89  GLVGKQTKSLLVQKTKYYKDFVQQQLQKGNEFTHYGGKPLDQQTKAPA 136


>gi|92118658|ref|YP_578387.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91801552|gb|ABE63927.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 259

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 40/144 (27%), Gaps = 44/144 (30%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V+     LR  V VG+           +      P W  P  ++++           
Sbjct: 141 LYLVQGDGKALRYGVGVGKPG-FLWAGVKTVTAKKEWPGWTPPAEMLKRR---------- 189

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                                        P+     + G  N + +  +   S     +H
Sbjct: 190 -----------------------------PDLPRHMEGGPQNPLGARAMYLGSS-LYRIH 219

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            + EP          +SGC+R+RN
Sbjct: 220 GSNEPWTIGTN---VSSGCIRMRN 240


>gi|52140495|ref|YP_086333.1| hypothetical protein BCZK4762 [Bacillus cereus E33L]
 gi|51973964|gb|AAU15514.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 153

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|126726063|ref|ZP_01741905.1| Twin-arginine translocation pathway signal [Rhodobacterales
           bacterium HTCC2150]
 gi|126705267|gb|EBA04358.1| Twin-arginine translocation pathway signal [Rhodobacterales
           bacterium HTCC2150]
          Length = 184

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 53/188 (28%), Gaps = 45/188 (23%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           L    +     +   +    + V+     L      K  +R +V VGR           +
Sbjct: 19  LNKAFLPKHVRMRADLPAGEMHVDPNTFKLYFTLGNKRAIRYSVGVGRPGLY-ESGTFTV 77

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
                 P W    ++I        ++DP     +                          
Sbjct: 78  GAKREWPRWTPTPAMI--------KRDPGSYARH-------------------------- 103

Query: 296 FIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN--I 349
                  G  N + +  +  +  N       +H T +P    +     ++GC R+ N  +
Sbjct: 104 -KDGMPGGPNNPLGARAMYLHDANGRDTMLRIHGTAQPWTIGS---AVSNGCARLTNEHV 159

Query: 350 IDLDVWLL 357
           ++L   ++
Sbjct: 160 VELYDQVM 167


>gi|326328746|ref|ZP_08195084.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
           Broad-1]
 gi|325953489|gb|EGD45491.1| zinc D-Ala-D-Ala carboxypeptidase [Nocardioidaceae bacterium
           Broad-1]
          Length = 251

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G+S  +V +L+ R+           +  ++     +AV+ FQ  +GL   G+  
Sbjct: 42  SGTLQQGSSGNAVTQLQIRVAGWAATGTIFSIDGSYGPATTTAVRNFQAAYGLAADGVAG 101

Query: 159 SSTLEAM 165
           ++T   +
Sbjct: 102 TNTFNKL 108


>gi|323135569|ref|ZP_08070652.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocystis sp. ATCC 49242]
 gi|322398660|gb|EFY01179.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocystis sp. ATCC 49242]
          Length = 454

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 8/77 (10%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P      L  G     V +L+ RL   G      G    +D    + V  FQ 
Sbjct: 373 GRWLAPAPPDDGPALEPGAGGPDVAQLQRRLADFGYKMVETG---VYDEDTAATVAAFQR 429

Query: 148 RHG-LDPSGMVDSSTLE 163
                   G  D+STL+
Sbjct: 430 HFRPARVDGRADASTLD 446


>gi|254382818|ref|ZP_04998174.1| hypothetical protein SSAG_02477 [Streptomyces sp. Mg1]
 gi|194341719|gb|EDX22685.1| hypothetical protein SSAG_02477 [Streptomyces sp. Mg1]
          Length = 368

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--G 155
           P + L  G+S   V+RL+  L  +         +  +D   E+AV  FQ RH +     G
Sbjct: 299 PAQSLQYGDSGAEVERLQRLLASARLY--RGKFNGMYDDRTENAVSEFQWRHEIFDDPWG 356

Query: 156 MVDSSTLEAMN 166
           +   +T +A+ 
Sbjct: 357 VYGPATRKALE 367


>gi|23752338|ref|NP_705653.1| gp27 [Burkholderia phage Bcep781]
 gi|47842850|ref|NP_958132.2| gp27 [Burkholderia phage Bcep43]
 gi|23507205|gb|AAN38028.1| gp27 [Burkholderia phage Bcep781]
 gi|47719038|gb|AAR89318.2| gp27 [Burkholderia phage Bcep43]
          Length = 255

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G S  +V  L+ RL +          S  FDA V +A++ +Q  HG+ P G+  
Sbjct: 2   AAPLIVGASGRAVVFLQARLGL--------AQSGQFDASVATALRQWQEAHGMTPDGVYG 53

Query: 159 SST 161
           S T
Sbjct: 54  SQT 56


>gi|323701623|ref|ZP_08113295.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533396|gb|EGB23263.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 193

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 6/62 (9%)

Query: 303 GKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
                + +  +          +H T  P    N     + GC+R+ N  + +L   +   
Sbjct: 58  NPGGVLGTRWMGLNIPGGNYGIHGTNNPSSIGNR---VSLGCIRMHNSHVEELFPQIPIG 114

Query: 360 TP 361
           TP
Sbjct: 115 TP 116


>gi|148257875|ref|YP_001242460.1| hypothetical protein BBta_6654 [Bradyrhizobium sp. BTAi1]
 gi|146410048|gb|ABQ38554.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 190

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 50/181 (27%), Gaps = 46/181 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R   + + +     ++V+     L  V      LR  + VGR D        RI      
Sbjct: 48  RETVMFQGQYAPGTIVVSTSERRLYLVLGNGQALRYGIGVGR-DGFRWSGVHRITAKKEW 106

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 107 PAWTPPAQMLRRR---------------------------------------PDLPRHMA 127

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
            G  N + +  +         +H + EP          +SGC R+ N  + DL   +   
Sbjct: 128 GGIENPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTNEDVADLYDRVAVG 183

Query: 360 T 360
           T
Sbjct: 184 T 184


>gi|253575916|ref|ZP_04853250.1| carboxyl-terminal protease [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844710|gb|EES72724.1| carboxyl-terminal protease [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 483

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    +          ++  +  L   G           FD   E A+K FQ    L  +
Sbjct: 385 PINKEKTYKYDMLGEDIKSAQTMLDGLGY--NPGRKDGYFDKNTEKALKKFQTDQKLTAN 442

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           G++D+ T EA+   +  +IR  + ++   + L
Sbjct: 443 GVLDAKTAEALEASIIQQIRDPKNDMQLNRAL 474


>gi|154499164|ref|ZP_02037542.1| hypothetical protein BACCAP_03159 [Bacteroides capillosus ATCC
           29799]
 gi|150272004|gb|EDM99230.1| hypothetical protein BACCAP_03159 [Bacteroides capillosus ATCC
           29799]
          Length = 367

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 4/80 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL---- 162
            S  +++L+  + ++G           +  Y E AV+ FQ   GL  SG+VD +TL    
Sbjct: 28  KSEDIKQLQRAIYMAGFWSSPSEPDGVYGIYTECAVRGFQYEKGLQTSGVVDKATLSKLE 87

Query: 163 EAMNVPVDLRIRQLQVNLMR 182
                    R +   +  +R
Sbjct: 88  AWSGTLSATRSKSPALTYIR 107



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+   +  ++R  LI  G    +   +  F+A +   VK FQ   GL   G V   TL  
Sbjct: 116 GDIGAAPTQIRGLLIKKGY---NCASTGPFNAELVGVVKKFQKDSGLTQDGSVGQVTLAV 172

Query: 165 MNVPVDL 171
           +   V  
Sbjct: 173 LENTVSD 179


>gi|269967430|ref|ZP_06181490.1| putative general secretion pathway protein A [Vibrio alginolyticus
           40B]
 gi|269828018|gb|EEZ82292.1| putative general secretion pathway protein A [Vibrio alginolyticus
           40B]
          Length = 538

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L L     +++ L   L  +  +      +  FD  ++  V+LFQ   G+  
Sbjct: 450 WHAPLNETLRLDMEGPAIEVLDRLLAEA--VSEPLLETSIFDGAMKERVELFQRWQGIGV 507

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQ 177
            G+    TL+ +   V     QL 
Sbjct: 508 DGIAGKRTLDRLQQNVQPDAPQLA 531


>gi|220927494|ref|YP_002504403.1| spore cortex-lytic enzyme [Clostridium cellulolyticum H10]
 gi|219997822|gb|ACL74423.1| spore cortex-lytic enzyme [Clostridium cellulolyticum H10]
          Length = 231

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G+    V+ +++ L   G  D +  +   F      +V  +Q ++GL  +G+ 
Sbjct: 30  SAPSLKIGDRGEEVKDMQQELKNWGYFDGN--VDGRFGYDTLRSVLSYQRQYGLKANGIA 87

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           D +TL  + + +   I     N      +  +++
Sbjct: 88  DRTTL--LTMGLAELIESGTANAAATSNISNEQL 119


>gi|325912856|ref|ZP_08175234.1| peptidase, S41 family [Lactobacillus iners UPII 60-B]
 gi|325477849|gb|EGC80983.1| peptidase, S41 family [Lactobacillus iners UPII 60-B]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|325911993|ref|ZP_08174395.1| peptidase, S41 family [Lactobacillus iners UPII 143-D]
 gi|325476178|gb|EGC79342.1| peptidase, S41 family [Lactobacillus iners UPII 143-D]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|315653518|ref|ZP_07906439.1| carboxy-terminal processing protease CtpA [Lactobacillus iners ATCC
           55195]
 gi|315489209|gb|EFU78850.1| carboxy-terminal processing protease CtpA [Lactobacillus iners ATCC
           55195]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|312873993|ref|ZP_07734029.1| peptidase, S41 family [Lactobacillus iners LEAF 2052A-d]
 gi|311090542|gb|EFQ48950.1| peptidase, S41 family [Lactobacillus iners LEAF 2052A-d]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|312875468|ref|ZP_07735471.1| peptidase, S41 family [Lactobacillus iners LEAF 2053A-b]
 gi|311088979|gb|EFQ47420.1| peptidase, S41 family [Lactobacillus iners LEAF 2053A-b]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|309807519|ref|ZP_07701476.1| peptidase, S41 family [Lactobacillus iners LactinV 01V1-a]
 gi|308169246|gb|EFO71307.1| peptidase, S41 family [Lactobacillus iners LactinV 01V1-a]
          Length = 431

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 347 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 404

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 405 RYALYVAA 412


>gi|309806746|ref|ZP_07700740.1| peptidase, S41 family [Lactobacillus iners LactinV 03V1-b]
 gi|308166861|gb|EFO69046.1| peptidase, S41 family [Lactobacillus iners LactinV 03V1-b]
          Length = 431

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 347 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 404

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 405 RYALYVAA 412


>gi|309805739|ref|ZP_07699779.1| peptidase, S41 family [Lactobacillus iners LactinV 09V1-c]
 gi|308164992|gb|EFO67235.1| peptidase, S41 family [Lactobacillus iners LactinV 09V1-c]
          Length = 399

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 315 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 372

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 373 RYALYVAA 380


>gi|309804179|ref|ZP_07698257.1| peptidase, S41 family [Lactobacillus iners LactinV 11V1-d]
 gi|309809279|ref|ZP_07703148.1| peptidase, S41 family [Lactobacillus iners SPIN 2503V10-D]
 gi|329921343|ref|ZP_08277781.1| peptidase, S41 family [Lactobacillus iners SPIN 1401G]
 gi|308163762|gb|EFO66031.1| peptidase, S41 family [Lactobacillus iners LactinV 11V1-d]
 gi|308170392|gb|EFO72416.1| peptidase, S41 family [Lactobacillus iners SPIN 2503V10-D]
 gi|328934635|gb|EGG31139.1| peptidase, S41 family [Lactobacillus iners SPIN 1401G]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|259500647|ref|ZP_05743549.1| carboxy-terminal processing protease CtpA [Lactobacillus iners DSM
           13335]
 gi|302191336|ref|ZP_07267590.1| hypothetical protein LineA_04932 [Lactobacillus iners AB-1]
 gi|259168031|gb|EEW52526.1| carboxy-terminal processing protease CtpA [Lactobacillus iners DSM
           13335]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+FQ  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFQKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|90411905|ref|ZP_01219913.1| putative general secretion pathway protein A [Photobacterium
           profundum 3TCK]
 gi|90327163|gb|EAS43535.1| putative general secretion pathway protein A [Photobacterium
           profundum 3TCK]
          Length = 521

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               +  G     V  L ++L     L  ++  S  F   V   ++ FQ    L   G+ 
Sbjct: 440 SKTTIRYGQQGPRVAWLSQQLNS--FLGETQTHSDYFGQSVLDKLRRFQRSQDLAADGIA 497

Query: 158 DSSTL 162
              TL
Sbjct: 498 GPLTL 502


>gi|89097834|ref|ZP_01170721.1| hypothetical protein B14911_22882 [Bacillus sp. NRRL B-14911]
 gi|89087336|gb|EAR66450.1| hypothetical protein B14911_22882 [Bacillus sp. NRRL B-14911]
          Length = 496

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P   L + +SS  V+  +E L   G           FD   + AV   Q  H L+ +G++
Sbjct: 404 PESELKVSSSSAEVKAAQEMLKALGF--EPGRTDGFFDEKTKQAVIQLQKAHKLEQTGVI 461

Query: 158 DSST 161
              T
Sbjct: 462 TGDT 465


>gi|297617789|ref|YP_003702948.1| peptidoglycan-binding lysin domain protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145626|gb|ADI02383.1| Peptidoglycan-binding lysin domain protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 381

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 47/143 (32%), Gaps = 17/143 (11%)

Query: 30  PIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
            +      E + +    + +  ++               I   +T++    A    Q ++
Sbjct: 45  DLALGTYGEDVRQVQQCLSHLNYNTGGIDG---------IYGPQTVSAV-SAFQKDQQLV 94

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
             G         L        V +L++ L   G    +KG+   F     SAV  FQ  +
Sbjct: 95  VDGIAGPETQWALF-----KIVSQLQKDLTFVGF--DTKGVDGCFGPATVSAVLSFQTAN 147

Query: 150 GLDPSGMVDSSTLEAMNVPVDLR 172
            L   G+V   T +A+   V  +
Sbjct: 148 KLKADGIVGPETKKALEQAVAAK 170


>gi|283470634|emb|CAQ49845.1| carboxy-processing protease [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 496

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|258422547|ref|ZP_05685455.1| carboxyl-terminal protease [Staphylococcus aureus A9635]
 gi|257847304|gb|EEV71310.1| carboxyl-terminal protease [Staphylococcus aureus A9635]
          Length = 496

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|160876018|ref|YP_001555334.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160861540|gb|ABX50074.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
          Length = 273

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L++RL  +G    S  +   F    + A++ FQ +  L  +G     
Sbjct: 2   TLKKGSNGSQVRDLQQRLNAAG---ASLTVDGWFGDATQKAIEQFQDKQDLPRTGYAGVR 58

Query: 161 TLE 163
           TL 
Sbjct: 59  TLA 61


>gi|148267907|ref|YP_001246850.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH9]
 gi|150393970|ref|YP_001316645.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH1]
 gi|253315257|ref|ZP_04838470.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253733333|ref|ZP_04867498.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257795525|ref|ZP_05644504.1| carboxyl-terminal protease [Staphylococcus aureus A9781]
 gi|258413333|ref|ZP_05681609.1| carboxyl-terminal protease [Staphylococcus aureus A9763]
 gi|258420560|ref|ZP_05683502.1| carboxyl-terminal protease [Staphylococcus aureus A9719]
 gi|258434668|ref|ZP_05688742.1| carboxyl-terminal protease [Staphylococcus aureus A9299]
 gi|258444756|ref|ZP_05693085.1| carboxyl-terminal protease [Staphylococcus aureus A8115]
 gi|258447410|ref|ZP_05695554.1| carboxyl-terminal protease [Staphylococcus aureus A6300]
 gi|258449251|ref|ZP_05697354.1| carboxyl-terminal protease [Staphylococcus aureus A6224]
 gi|258454630|ref|ZP_05702594.1| carboxyl-terminal protease [Staphylococcus aureus A5937]
 gi|269203042|ref|YP_003282311.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892915|ref|ZP_06301150.1| carboxyl-terminal processing protease [Staphylococcus aureus A8117]
 gi|282927946|ref|ZP_06335555.1| carboxyl-terminal processing protease [Staphylococcus aureus
           A10102]
 gi|295406366|ref|ZP_06816173.1| carboxyl-terminal processing protease [Staphylococcus aureus A8819]
 gi|296275280|ref|ZP_06857787.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297244595|ref|ZP_06928478.1| carboxyl-terminal processing protease [Staphylococcus aureus A8796]
 gi|147740976|gb|ABQ49274.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149946422|gb|ABR52358.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           JH1]
 gi|253728685|gb|EES97414.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257789497|gb|EEV27837.1| carboxyl-terminal protease [Staphylococcus aureus A9781]
 gi|257839897|gb|EEV64365.1| carboxyl-terminal protease [Staphylococcus aureus A9763]
 gi|257843508|gb|EEV67915.1| carboxyl-terminal protease [Staphylococcus aureus A9719]
 gi|257849029|gb|EEV73011.1| carboxyl-terminal protease [Staphylococcus aureus A9299]
 gi|257850249|gb|EEV74202.1| carboxyl-terminal protease [Staphylococcus aureus A8115]
 gi|257853601|gb|EEV76560.1| carboxyl-terminal protease [Staphylococcus aureus A6300]
 gi|257857239|gb|EEV80137.1| carboxyl-terminal protease [Staphylococcus aureus A6224]
 gi|257863013|gb|EEV85777.1| carboxyl-terminal protease [Staphylococcus aureus A5937]
 gi|262075332|gb|ACY11305.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590243|gb|EFB95323.1| carboxyl-terminal processing protease [Staphylococcus aureus
           A10102]
 gi|282764912|gb|EFC05037.1| carboxyl-terminal processing protease [Staphylococcus aureus A8117]
 gi|285817098|gb|ADC37585.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus 04-02981]
 gi|294968954|gb|EFG44976.1| carboxyl-terminal processing protease [Staphylococcus aureus A8819]
 gi|297178625|gb|EFH37871.1| carboxyl-terminal processing protease [Staphylococcus aureus A8796]
 gi|312829814|emb|CBX34656.1| C-terminal processing peptidase family protein [Staphylococcus
           aureus subsp. aureus ECT-R 2]
 gi|315129129|gb|EFT85124.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727143|gb|EGG63599.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21172]
          Length = 496

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|15924410|ref|NP_371944.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|15927001|ref|NP_374534.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus N315]
 gi|156979739|ref|YP_001441998.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|255006209|ref|ZP_05144810.2| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|81705698|sp|Q7A5M9|CTPAL_STAAN RecName: Full=Probable CtpA-like serine protease
 gi|81781605|sp|Q99U67|CTPAL_STAAM RecName: Full=Probable CtpA-like serine protease
 gi|13701218|dbj|BAB42513.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus subsp. aureus N315]
 gi|14247191|dbj|BAB57582.1| probable carboxy-terminal processing proteinase [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156721874|dbj|BAF78291.1| probable carboxy-terminal processing proteinase [Staphylococcus
           aureus subsp. aureus Mu3]
          Length = 496

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|312126439|ref|YP_003991313.1| carboxyl-terminal protease [Caldicellulosiruptor hydrothermalis
           108]
 gi|311776458|gb|ADQ05944.1| carboxyl-terminal protease [Caldicellulosiruptor hydrothermalis
           108]
          Length = 472

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +AVK FQ    L PSG++
Sbjct: 380 ATKKFKKGDMDLEVLAAQQRLFYLGYLSNWTA---KMDDSTVAAVKKFQKDTKLYPSGVL 436

Query: 158 DSSTLEAMNVPVDL 171
           D +T + +N     
Sbjct: 437 DITTQKKLNEKFSE 450


>gi|229014219|ref|ZP_04171340.1| ErfK/YbiS/YcfS/YnhG [Bacillus mycoides DSM 2048]
 gi|228747173|gb|EEL97055.1| ErfK/YbiS/YcfS/YnhG [Bacillus mycoides DSM 2048]
          Length = 153

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  ++GK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTKINKMDYYQDGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMFNND--IHWLFER 143


>gi|229076415|ref|ZP_04209379.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock4-18]
 gi|229099487|ref|ZP_04230415.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-29]
 gi|229105645|ref|ZP_04236278.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-28]
 gi|229118505|ref|ZP_04247859.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock1-3]
 gi|228665075|gb|EEL20563.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock1-3]
 gi|228677781|gb|EEL32025.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-28]
 gi|228683783|gb|EEL37733.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-29]
 gi|228706702|gb|EEL58911.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock4-18]
          Length = 153

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMFNND--IHWLFER 143


>gi|52787273|ref|YP_093102.1| petidoglycan binding protein [Bacillus licheniformis ATCC 14580]
 gi|319647802|ref|ZP_08002020.1| hypothetical protein HMPREF1012_03059 [Bacillus sp. BT1B_CT2]
 gi|52349775|gb|AAU42409.1| putative petidoglycan binding protein, contains PG_binding_1 domain
           [Bacillus licheniformis ATCC 14580]
 gi|317390143|gb|EFV70952.1| hypothetical protein HMPREF1012_03059 [Bacillus sp. BT1B_CT2]
          Length = 69

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 4/65 (6%)

Query: 106 NSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               +V++++E L            + G+   +     +AVK FQ  H L   G+    T
Sbjct: 1   MKGTAVRQIQEALAALYFYPDKGAKNNGIGGYYGPKTANAVKRFQHMHRLSADGIYGPKT 60

Query: 162 LEAMN 166
              + 
Sbjct: 61  KAKLE 65


>gi|254500010|ref|ZP_05112163.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
 gi|222441477|gb|EEE48154.1| ErfK/YbiS/YcfS/YnhG superfamily [Labrenzia alexandrii DFL-11]
          Length = 167

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 8/74 (10%)

Query: 292 EPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           +   +      G  N + S  +      R+  Y +H T EP       R  ++GCVR+ N
Sbjct: 92  KYRKYANGVPGGPNNPLGSRALYLYRNGRDTMYRIHGTTEPSSIG---RSVSNGCVRMIN 148

Query: 349 I--IDLDVWLLKDT 360
               DL   +   T
Sbjct: 149 AHVEDLYERVPLGT 162


>gi|229179581|ref|ZP_04306933.1| Peptidoglycan-binding domain 1 protein [Bacillus cereus 172560W]
 gi|228603875|gb|EEK61344.1| Peptidoglycan-binding domain 1 protein [Bacillus cereus 172560W]
          Length = 571

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 8/96 (8%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGL 130
                E  +A +  ++        P + L  G+ +++V+ +++ L  I     D P   +
Sbjct: 334 YYKDIEVRLAEFIQVVK-----SFPGKILKEGDQNLAVETIQKYLYHIRKRYTDIPEVRV 388

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  +++   +AVK FQ +  L  +G VD  T   MN
Sbjct: 389 NGTYNSSTANAVKAFQRQFQLPENGAVDEVTWNKMN 424



 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+RL+  L   G       L   F    E +VK FQ       +G+V    
Sbjct: 440 LQNGSQGELVRRLQNLLKDYGFY--EGQLDGFFGLGTEVSVKEFQKIKSFTVTGVVRKEL 497

Query: 162 L 162
            
Sbjct: 498 W 498


>gi|224162231|ref|XP_002338425.1| predicted protein [Populus trichocarpa]
 gi|222872207|gb|EEF09338.1| predicted protein [Populus trichocarpa]
          Length = 304

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G +   +  L++ L   G        ++  FD  +ESA+K +Q    L+ +G++D ST
Sbjct: 47  RKGQTVEGLVELKQYLKRFGYYPSDVNLMTSDFDDLLESALKTYQNYFHLNVTGILDDST 106

Query: 162 LEAMNVP 168
           ++ M +P
Sbjct: 107 IKQMMIP 113


>gi|118488262|gb|ABK95950.1| unknown [Populus trichocarpa]
          Length = 304

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G +   +  L++ L   G        ++  FD  +ESA+K +Q    L+ +G++D ST
Sbjct: 47  RKGQTVEGLVELKQYLKRFGYYPSDVNLMTSDFDDLLESALKTYQNYFHLNVTGILDDST 106

Query: 162 LEAMNVP 168
           ++ M +P
Sbjct: 107 IKQMMIP 113


>gi|282899460|ref|ZP_06307426.1| hypothetical protein CRC_00907 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195617|gb|EFA70548.1| hypothetical protein CRC_00907 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 313

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   ++ L+ R                +    E+A+K FQ ++GL   G++  +T 
Sbjct: 261 SGPIMRYLQYR--------VGTTPDGIYGRQTEAAIKRFQQQNGLTADGIIGPATW 308



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 89  LSRGGWPELPIRPLHL-----GNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVES 140
           + +G   +LP  P+       G+   S+ RL++ L      D +               S
Sbjct: 162 IVKGLTGKLPTAPVKPVEDVTGDKDTSILRLQKALNQLKITDRNNRPLTEDNFTGPATSS 221

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           AV+ FQ   G+ P+GM   +T +A+N  +  R  Q
Sbjct: 222 AVEKFQRVVGIIPTGMATQTTWDAINQILAKRTVQ 256


>gi|228919597|ref|ZP_04082959.1| hypothetical protein bthur0011_6210 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228839951|gb|EEM85230.1| hypothetical protein bthur0011_6210 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 219

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 12/93 (12%)

Query: 264 QYLKDNNIH--MIDEKGKEVFVEEVD----WNSPEPPNFIFRQDPG--KINAMASTKIEF 315
            + ++ N         G+E               +   +  ++ PG    N + +  +  
Sbjct: 2   SFFENGNYTKTFPVTTGRERTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLGL 61

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             +N   +H T       +     ++GC+R+ +
Sbjct: 62  -DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 90


>gi|288921937|ref|ZP_06416148.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
 gi|288346695|gb|EFC81013.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
          Length = 300

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 21/89 (23%), Gaps = 16/89 (17%)

Query: 300 QDPGKINAMASTKIEFY------SRNN-----TYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +      A                          +H T +P       R  + GC+R+ N
Sbjct: 189 RPSNPNGAYGPYAFGLSGFSTSLDDFGGRDPVIGIHGTNDPSSLG---RDVSHGCIRLSN 245

Query: 349 --IIDLDVWLLKDTPTWSRYHIEEVVKTR 375
             I  L   +   TP            T 
Sbjct: 246 DSITRLAQTVPLGTPVEIVAGPSAPRATG 274


>gi|188579646|ref|YP_001923091.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179343144|gb|ACB78556.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 307

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 39/180 (21%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +R +           ++V+  A  L  V       R  V VG+    +   ++ IN   
Sbjct: 150 FLRQEVDFRTNEPPGTIVVDPKAHFLYLVLPNGRARRYGVGVGKQG-FSWSGNATINSKQ 208

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P+ +I +     L ++   L+                                
Sbjct: 209 AWPDWYPPKEMIARR--PDLAREVDKLQSG----------------------------LG 238

Query: 300 QDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G  N + +  +  +  +++  + +H T EP          +SGC+R+  ++ IDL  
Sbjct: 239 VPGGSRNPLGARAMYLWQNNKDTLFRIHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 295


>gi|149912914|ref|ZP_01901448.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
 gi|149813320|gb|EDM73146.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. AzwK-3b]
          Length = 200

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 53/173 (30%), Gaps = 47/173 (27%)

Query: 179 NLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           +   +        +    +LV+I + +L    E+G+        V   +  T    +R+ 
Sbjct: 53  SFRSLDWQPYFSNLNNGAILVDISSRALHYWSEDGQTYKLYPSSVPLSEDLTRRGRTRVT 112

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           + +  P W    S+        L+++P                       DW        
Sbjct: 113 QKVEGPSWRPTPSM--------LKRNP-----------------------DW-------- 133

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                PG  N + +  +        Y +H T +        R  ++GC+ + N
Sbjct: 134 PPFVPPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RRSSNGCIGLYN 181


>gi|56963703|ref|YP_175434.1| cell wall lytic activity [Bacillus clausii KSM-K16]
 gi|56909946|dbj|BAD64473.1| cell wall lytic activity [Bacillus clausii KSM-K16]
          Length = 307

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 8/66 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G+ + +V+ ++ +L I             F    E  V+ FQ  +GL   G+V  +
Sbjct: 70  TVRFGDRNETVREVQAKLGI--------PADGIFGPQTEKEVREFQANNGLAADGIVGPA 121

Query: 161 TLEAMN 166
           T +A++
Sbjct: 122 TKKALD 127


>gi|146279925|ref|YP_001170083.1| hypothetical protein Rsph17025_3924 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145558166|gb|ABP72778.1| hypothetical protein Rsph17025_3924 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 184

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 55/220 (25%)

Query: 142 VKLFQMRHGL-----DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYV 196
           +K F  RH L        G++    + A+   V+ R       +   +     ++G   +
Sbjct: 1   MKSFNRRHALGLGIAAAGGLLLP--MPAIARTVN-RANISSFTMQSWEDHF-DRLGKGAI 56

Query: 197 LVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + +  + +L     +G+        V   +  T   ++ I R    P W    S +++  
Sbjct: 57  VADTTSRALHFWSGDGQEYRVYPTSVPMSEELTKRGYTEIVRKKVGPSWTPTPSQMERYP 116

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                          DW             PG  N + +  +  
Sbjct: 117 -------------------------------DWKPIG---------PGPENPLGTHAMYL 136

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
                  +H T +        R  + GC+ + N   +   
Sbjct: 137 GWPAYI-IHGTHDTRKIG---RPSSDGCIGLYN-EKIAEL 171


>gi|30265076|ref|NP_847453.1| hypothetical protein BA_5274 [Bacillus anthracis str. Ames]
 gi|47530582|ref|YP_021931.1| hypothetical protein GBAA_5274 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187887|ref|YP_031140.1| hypothetical protein BAS4899 [Bacillus anthracis str. Sterne]
 gi|65317021|ref|ZP_00389980.1| COG1376: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
 gi|165870855|ref|ZP_02215507.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167634891|ref|ZP_02393209.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167639936|ref|ZP_02398204.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170685620|ref|ZP_02876843.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170706950|ref|ZP_02897407.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177652266|ref|ZP_02934769.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190567289|ref|ZP_03020204.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|196032930|ref|ZP_03100343.1| conserved hypothetical protein [Bacillus cereus W]
 gi|218906231|ref|YP_002454065.1| hypothetical protein BCAH820_5143 [Bacillus cereus AH820]
 gi|227817806|ref|YP_002817815.1| hypothetical protein BAMEG_5327 [Bacillus anthracis str. CDC 684]
 gi|228917666|ref|ZP_04081207.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228930062|ref|ZP_04093072.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228948763|ref|ZP_04111040.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229124572|ref|ZP_04253757.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus 95/8201]
 gi|229604331|ref|YP_002869273.1| hypothetical protein BAA_5305 [Bacillus anthracis str. A0248]
 gi|254687367|ref|ZP_05151224.1| hypothetical protein BantC_26468 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725380|ref|ZP_05187163.1| hypothetical protein BantA1_23447 [Bacillus anthracis str. A1055]
 gi|254733724|ref|ZP_05191440.1| hypothetical protein BantWNA_00962 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254740562|ref|ZP_05198253.1| hypothetical protein BantKB_06020 [Bacillus anthracis str. Kruger
           B]
 gi|254753176|ref|ZP_05205212.1| hypothetical protein BantV_11921 [Bacillus anthracis str. Vollum]
 gi|254761519|ref|ZP_05213540.1| hypothetical protein BantA9_24659 [Bacillus anthracis str.
           Australia 94]
 gi|30259753|gb|AAP28939.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47505730|gb|AAT34406.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181814|gb|AAT57190.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|164713364|gb|EDR18889.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167512017|gb|EDR87395.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167529641|gb|EDR92390.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170128053|gb|EDS96923.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170670084|gb|EDT20824.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172082272|gb|EDT67338.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190561793|gb|EDV15763.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|195994359|gb|EDX58314.1| conserved hypothetical protein [Bacillus cereus W]
 gi|218535206|gb|ACK87604.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|227003111|gb|ACP12854.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|228658912|gb|EEL14567.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus 95/8201]
 gi|228810895|gb|EEM57239.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228829561|gb|EEM75188.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228841903|gb|EEM87009.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229268739|gb|ACQ50376.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
          Length = 153

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFKIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|170741150|ref|YP_001769805.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168195424|gb|ACA17371.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 168

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 50/185 (27%), Gaps = 47/185 (25%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R     E  +    ++V      L  V      +R  + VG+  +Q     + +    
Sbjct: 23  TAREIVAFEADVSPGSIVVRTSERRLYFVNGDGTAIRYPIAVGKSGKQ-WTGLAHVEGKY 81

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  + +                                       + P     
Sbjct: 82  VQPAWSPPWEVKR---------------------------------------DNPRLPNV 102

Query: 300 QDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
              G   N M +  +         +H T  P        F + GC+R+  ++++DL   +
Sbjct: 103 IAGGSPRNPMGAAALTLDRGE-YAIHGTNRPSSIGT---FASYGCIRMYNQDVVDLFGRV 158

Query: 357 LKDTP 361
              TP
Sbjct: 159 AVGTP 163


>gi|90421588|ref|YP_529958.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90103602|gb|ABD85639.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 171

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 44/163 (26%), Gaps = 45/163 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++V      L  + + +  +R  V VG+V +Q     ++I+     P W  
Sbjct: 32  YSGDYSPGTIVVKTHERRLYLILDDRTAVRYPVGVGKVGKQ-WAGATKIDGKYREPAWAP 90

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + PN       G   
Sbjct: 91  PADVKR---------------------------------------DNPNIPDVIPGGSPA 111

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    +         +H T  P        F + GCVR+ N
Sbjct: 112 NPMGVAAMTLAGGE-YAIHGTNRPASIG---GFVSYGCVRMYN 150


>gi|225867017|ref|YP_002752395.1| hypothetical protein BCA_5180 [Bacillus cereus 03BB102]
 gi|225787277|gb|ACO27494.1| conserved hypothetical protein [Bacillus cereus 03BB102]
          Length = 153

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|225387902|ref|ZP_03757666.1| hypothetical protein CLOSTASPAR_01672 [Clostridium asparagiforme
           DSM 15981]
 gi|225046029|gb|EEG56275.1| hypothetical protein CLOSTASPAR_01672 [Clostridium asparagiforme
           DSM 15981]
          Length = 416

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L  I +     P       +      AV+ FQ   GL  +
Sbjct: 332 PGYDLTVGSSGPKVQQMQEQLDTIATVYSAIPRVNPDGIYGERTAEAVREFQSIFGLPQT 391

Query: 155 GMVDSSTLEAMN 166
           G+V+ +T   ++
Sbjct: 392 GVVNFATWYKIS 403


>gi|49480365|ref|YP_039052.1| hypothetical protein BT9727_4743 [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118480118|ref|YP_897269.1| hypothetical protein BALH_4569 [Bacillus thuringiensis str. Al
           Hakam]
 gi|229187279|ref|ZP_04314424.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BGSC 6E1]
 gi|49331921|gb|AAT62567.1| conserved hypothetical protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|118419343|gb|ABK87762.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|228596289|gb|EEK53964.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BGSC 6E1]
          Length = 153

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|297610914|ref|NP_001065361.2| Os10g0557900 [Oryza sativa Japonica Group]
 gi|14165321|gb|AAK55453.1|AC069300_8 putative metalloproteinase [Oryza sativa Japonica Group]
 gi|31433475|gb|AAP54980.1| Matrixin family protein, expressed [Oryza sativa Japonica Group]
 gi|255679626|dbj|BAF27198.2| Os10g0557900 [Oryza sativa Japonica Group]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L+  L   G +       + AFD ++E AV+ +Q R  L  +G +D++TL+
Sbjct: 48  GSHVTGLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLD 107

Query: 164 AMNVP 168
            +  P
Sbjct: 108 QIMSP 112


>gi|167759667|ref|ZP_02431794.1| hypothetical protein CLOSCI_02026 [Clostridium scindens ATCC 35704]
 gi|167662698|gb|EDS06828.1| hypothetical protein CLOSCI_02026 [Clostridium scindens ATCC 35704]
          Length = 421

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G       +     +     ++V+ FQ   GL  +
Sbjct: 337 PGYTLEIGSSGSKVRQMQEQLNVIAGSYPALPKINADGIYGPATAASVEKFQSIFGLPQT 396

Query: 155 GMVDSSTLEAMN 166
           G VD  T   ++
Sbjct: 397 GTVDYRTWYKIS 408


>gi|166031490|ref|ZP_02234319.1| hypothetical protein DORFOR_01187 [Dorea formicigenerans ATCC
           27755]
 gi|166028895|gb|EDR47652.1| hypothetical protein DORFOR_01187 [Dorea formicigenerans ATCC
           27755]
          Length = 287

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + ++E+L +         +   F    ++AV  FQ  HGL   G+V  +T 
Sbjct: 230 RKGARGNITRLIQEKLGV--------AVDGIFGQKTKNAVIAFQRAHGLIADGIVGKNTW 281

Query: 163 EAM 165
            A+
Sbjct: 282 RAL 284


>gi|116249009|ref|YP_764850.1| ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115253659|emb|CAK12052.1| conserved hypothetical ErfK/YbiS/YhnG family protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 226

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 61/199 (30%), Gaps = 19/199 (9%)

Query: 202 AASLEAVENG---------KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
             +  AV+NG         K+  +    V +     PI    ++      Y ++      
Sbjct: 34  NFTGTAVDNGVTFQRTNFAKIDKKWQRRVVKYFSSEPIGTVVVDTRHHFLYVIMENKTAI 93

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           +  + + R+  ++     I       +       +     P    F       N +    
Sbjct: 94  RYGVGVGREGFKWFGRATIDAKSLWPRWTPPP--EMRKRHPELPEFVAGGSPKNPLGPRA 151

Query: 313 IEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           +  +          H T EP          +SGC+R+ N   +D  L +  P  +   + 
Sbjct: 152 MYLHRDGVDTGYRFHGTVEPWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVL 206

Query: 370 EVVKTRKTTPVKLATEVPV 388
             +  +  +  +++   PV
Sbjct: 207 PHIADQAESAAQVSQTTPV 225


>gi|313903373|ref|ZP_07836765.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466461|gb|EFR61983.1| ErfK/YbiS/YcfS/YnhG family protein [Thermaerobacter subterraneus
           DSM 13965]
          Length = 248

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 17/72 (23%), Gaps = 10/72 (13%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVV 336
           G+      V                       +      +      +H T  P       
Sbjct: 90  GRPGEPSPVGEWRVTDIAHW------PGGPFGARWFGLSAPWGSYGIHGTNNPGSIGT-- 141

Query: 337 RFETSGCVRVRN 348
            + + GC+R+ N
Sbjct: 142 -YASLGCIRMFN 152



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 19/69 (27%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G+    V  L+  L  +G           +    E  V   +   GL P G  D +
Sbjct: 182 VYRRGDVGQDVVLLQLALRATGF--DPGVADGVYGGVTEKTVAEAEWWFGLHPDGTADMA 239

Query: 161 TLEAMNVPV 169
               +    
Sbjct: 240 LQRLVGFRP 248


>gi|258511676|ref|YP_003185110.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478402|gb|ACV58721.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 267

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                R L  G++   V  L+ RL + G       +   F      AV+ FQ   GL  +
Sbjct: 31  QAFTARNLIYGSTGYDVDELQGRLHLLGYY--WGRIDGIFGWKTYWAVRTFQYNFGLPVT 88

Query: 155 GMVDSST 161
           G VD  T
Sbjct: 89  GEVDMRT 95


>gi|297204540|ref|ZP_06921937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197710599|gb|EDY54633.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 300

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V   +  L  +G      G+   F      AVK FQ R GLD  G++   + +A
Sbjct: 240 GASGADVAEAQCLLRRAG--ISPGGIDGMFGPLTLRAVKTFQDREGLDADGILGPRSWKA 297

Query: 165 MN 166
           + 
Sbjct: 298 LR 299


>gi|56964579|ref|YP_176310.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
 gi|56910822|dbj|BAD65349.1| N-acetylmuramoyl-L-alanine amidase [Bacillus clausii KSM-K16]
          Length = 338

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + L+  L ++G          AF    E AV+ FQ   GL   G+   +T 
Sbjct: 277 RRGAKGNLTRVLQALLYLAGH--NPGPFDGAFGDGTEKAVRAFQKAKGLGVDGIAGKNTW 334

Query: 163 EAM 165
           +A+
Sbjct: 335 KAL 337


>gi|220932691|ref|YP_002509599.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
 gi|219994001|gb|ACL70604.1| Peptidoglycan-binding domain 1 protein [Halothermothrix orenii H
           168]
          Length = 225

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V++++  L   G       +          AV+ +Q   GL   G+V  +T E +
Sbjct: 2   MRGDDVEQVQTFLNQQGY---DVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEI 58

Query: 166 NVP---VDLRIRQLQVNLMRIKK 185
                  D+R      +  ++  
Sbjct: 59  KKDLGIEDVRHEIYFHDTEKVYW 81


>gi|309776368|ref|ZP_07671355.1| putative N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915887|gb|EFP61640.1| putative N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 168

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +    L  GN  + V + +  L +    G +         +    E AV+ +Q    L 
Sbjct: 1   MISKAALKPGNIGIGVNKQQAYLNMMQEKGFITTRNLQDGVYGTRTEQAVREWQKYANLP 60

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
             G + + T +++     LR  Q+  N+
Sbjct: 61  IDGEIGNDTWDSIV--NKLRDLQITTNI 86



 Score = 44.3 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G   +SV +++E L     S        +   + +   + V+ FQ  + L+  G++ 
Sbjct: 95  LSSGAQGISVFKMQEYLNEIAASNKCLRPIPVDGMYGSRTTTMVQQFQYLYDLNIDGVIG 154

Query: 159 SSTLEAM 165
            +T +A+
Sbjct: 155 KATWDAI 161


>gi|125532922|gb|EAY79487.1| hypothetical protein OsI_34615 [Oryza sativa Indica Group]
 gi|125575664|gb|EAZ16948.1| hypothetical protein OsJ_32430 [Oryza sativa Japonica Group]
          Length = 337

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L+  L   G +       + AFD ++E AV+ +Q R  L  +G +D++TL+
Sbjct: 30  GSHVTGLAELKRYLARFGYMAKPGRDTTDAFDEHLEVAVRRYQTRFSLPVTGRLDNATLD 89

Query: 164 AMNVP 168
            +  P
Sbjct: 90  QIMSP 94


>gi|23099261|ref|NP_692727.1| sporulation specific N-acetylmuramoyl-L-alanine amidase
           [Oceanobacillus iheyensis HTE831]
 gi|25453277|sp|P59105|SLEB_OCEIH RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|22777490|dbj|BAC13762.1| sporulation specific N-acetylmuramoyl-L-alanine amidase (spore
           cortex-lytic enzyme) [Oceanobacillus iheyensis HTE831]
          Length = 276

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/86 (16%), Positives = 28/86 (32%), Gaps = 2/86 (2%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +  Y              + +  G     V  L+ RL   G    +  +   F      A
Sbjct: 18  LTMYFTQTDNTKTYAFSDQVIQQGAVGEDVIELQARLQYLGFY--NGKIDGVFGWGTYWA 75

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++ FQ   G++  G+   +T + +  
Sbjct: 76  LRNFQYEFGMEIDGLAGQTTKDKLVQ 101


>gi|307311004|ref|ZP_07590649.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|307321938|ref|ZP_07601320.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306892408|gb|EFN23212.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306899684|gb|EFN30311.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 224

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 61/190 (32%), Gaps = 45/190 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I ++     R       K     ++VN P+  L  V  G   +R  + VG+     
Sbjct: 58  PGVPINRVDQRFHRQIVDYPTKERPGTIVVNTPSRFLYYVLPGGKAVRYGIGVGKQGFA- 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P     K+M     +  +Y++                     
Sbjct: 117 WEGEAYVAWKQEWPTWHPP-----KEMAERKPEVARYVEAG------------------- 152

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCV 344
                        PG  N + +  +  +++        +H TPE           +SGC+
Sbjct: 153 -----------MGPGISNPLGARALYLFNKEGRDTLFRLHGTPEWSSIGT---AASSGCI 198

Query: 345 RV--RNIIDL 352
           R+  ++I+DL
Sbjct: 199 RLMNQDIMDL 208


>gi|301059160|ref|ZP_07200101.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
 gi|300446740|gb|EFK10564.1| peptidoglycan binding domain protein [delta proteobacterium NaphS2]
          Length = 395

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             SV+ L+ RL   G    S             A++ FQ  HGL   G      L 
Sbjct: 96  DPSVRELQRRLAKLGYKPGSADGKT--GTKTRKAIRWFQAAHGLTVDGRFSEQLLA 149


>gi|218233206|ref|YP_002365541.1| hypothetical protein BCB4264_A0806 [Bacillus cereus B4264]
 gi|218161163|gb|ACK61155.1| conserved domain protein [Bacillus cereus B4264]
          Length = 219

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 31/92 (33%), Gaps = 10/92 (10%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIEFY 316
           ++  Y       +   + +    E         +   +  ++ PG    N + +  +   
Sbjct: 5   ENGNY--KKTFPVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIPGGAPNNPLGTRWLGL- 61

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +N   +H T       +     ++GC+R+ +
Sbjct: 62  DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 90


>gi|160892800|ref|ZP_02073590.1| hypothetical protein CLOL250_00331 [Clostridium sp. L2-50]
 gi|156865841|gb|EDO59272.1| hypothetical protein CLOL250_00331 [Clostridium sp. L2-50]
          Length = 413

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   V++L+E+L  I       P+      +      AV+ FQ    L  +
Sbjct: 329 PGYDLSIGATGDKVRQLQEQLNRIAQNYPSIPTVAADGIYGPATADAVRRFQQIFDLPVT 388

Query: 155 GMVDSSTLEAMNV 167
           G+ D ST   ++ 
Sbjct: 389 GITDYSTWYKVSQ 401


>gi|240139634|ref|YP_002964110.1| hypothetical protein MexAM1_META1p3085 [Methylobacterium extorquens
           AM1]
 gi|240009607|gb|ACS40833.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens AM1]
          Length = 236

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 14/88 (15%)

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDP--------GKINAMASTKIEFYSRNNTYMHDTPE 328
            G +    + +W    PP  + R+ P        G  N + +  +   +     +H T E
Sbjct: 142 TGAKTISAKREWPDWTPPAEMLRRRPDLPRHMVGGPENPLGARAMYLGTS-LYRIHGTNE 200

Query: 329 PILFNNVVRFETSGCVRV--RNIIDLDV 354
           P          +SGC+R+   ++IDL  
Sbjct: 201 PHTIGQN---VSSGCIRMMNEDVIDLYE 225


>gi|83950058|ref|ZP_00958791.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
 gi|83837957|gb|EAP77253.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius nubinhibens ISM]
          Length = 176

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 53/199 (26%), Gaps = 48/199 (24%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGR 223
           +  P   R       +   +      +    ++ +  + +L     +G         V  
Sbjct: 18  VLAPTGTRRNASSFTMQDWRDHF-DTLDQGAIVADTGSRALHYWNADGSDYRIYPTSVPM 76

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            +  T   ++++ R    P W    S+        + ++P+                   
Sbjct: 77  TEELTKRGYTKVVRKRVGPDWTPTPSM--------VERNPELKY---------------- 112

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGC 343
                             PG  N + +  +         +H T +        R  + GC
Sbjct: 113 ----------------MPPGPDNPLGTHAMYLSWP-AYLIHGTHDTRKIG---RRSSDGC 152

Query: 344 VRVRN--IIDLDVWLLKDT 360
           + + N  I +L   +   T
Sbjct: 153 IGLYNEKIEELYALVPIGT 171


>gi|196040521|ref|ZP_03107821.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|228936776|ref|ZP_04099566.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229094148|ref|ZP_04225228.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-42]
 gi|196028653|gb|EDX67260.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|228689251|gb|EEL43072.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock3-42]
 gi|228822895|gb|EEM68737.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 153

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|158321863|ref|YP_001514370.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           oremlandii OhILAs]
 gi|158142062|gb|ABW20374.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 762

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ L+  L   G    +  +  +F      AVK +Q ++GL   G V   T
Sbjct: 44  LVKGSIGNDVKLLQTLLNNEG---ANLEVDGSFGPLTLKAVKEYQSKNGLKVDGFVGPLT 100

Query: 162 LEAMNVPVDL 171
             ++      
Sbjct: 101 RASLMGKAAQ 110


>gi|27364080|ref|NP_759608.1| general secretion pathway protein A [Vibrio vulnificus CMCP6]
 gi|27360198|gb|AAO09135.1| General secretion pathway protein A [Vibrio vulnificus CMCP6]
          Length = 718

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 11/141 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    +++ L + L  +  L+    ++  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIEVLDQLLAKA--LNDEPLMTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA-SLEAVENGK 212
            G+    TL         R++ +       ++L + +      ++  P   SL  +    
Sbjct: 514 DGIAGQRTLA--------RLQHMVSLSEPWRELSQAEKQGEEQVMRYPEFPSLAPLLRTY 565

Query: 213 VGLRSTVIVGRVDRQTPILHS 233
               +  ++   D+ +P L +
Sbjct: 566 PLAETGDVINVADQTSPTLVA 586


>gi|283796334|ref|ZP_06345487.1| spore cortex-lytic enzyme SleC [Clostridium sp. M62/1]
 gi|291075734|gb|EFE13098.1| spore cortex-lytic enzyme SleC [Clostridium sp. M62/1]
 gi|295091586|emb|CBK77693.1| Putative peptidoglycan-binding domain-containing protein
           [Clostridium cf. saccharolyticum K10]
 gi|295116196|emb|CBL37043.1| Putative peptidoglycan-binding domain-containing protein
           [butyrate-producing bacterium SM4/1]
          Length = 423

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+    V++++E+L  I +     P       +      AV+ FQ   GL 
Sbjct: 337 SFPGTDLTIGSRGSKVRQMQEQLDAIATIYTAIPRIQPDGIYGPATAEAVRTFQSIFGLP 396

Query: 153 PSGMVDSSTLEAMN 166
            +G+VD +T   ++
Sbjct: 397 QTGVVDFATWYKIS 410


>gi|209546852|ref|YP_002278770.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538096|gb|ACI58030.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 224

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 55/180 (30%), Gaps = 10/180 (5%)

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
           K+  R    V +     PI    ++      Y ++      +  + + R+  ++     I
Sbjct: 51  KIDRRWQRQVVKYFSSEPIGTVVVDTRHHFLYVIMENKTAIRYGVGVGREGFKWFGRATI 110

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPE 328
                  +       +     P    F       N +    +  +          H T E
Sbjct: 111 DAKSLWPQWTPPP--EMRKRHPELPEFVAGGSPKNPLGPRAMYLHRDGVDTGYRFHGTLE 168

Query: 329 PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
           P          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +++   PV
Sbjct: 169 PWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIADQAESTTQVSQTTPV 223


>gi|118485900|gb|ABK94796.1| unknown [Populus trichocarpa]
          Length = 309

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G +   +  L++ L   G          S  FD ++E A+K +Q    L+ +G +DSS
Sbjct: 47  KKGQTVQGLIELKQYLKKLGYYPSDDITLTSSDFDDHLELALKTYQEYFHLNVTGNLDSS 106

Query: 161 TLEAMNVP 168
           T++ M +P
Sbjct: 107 TIQQMVIP 114


>gi|71892403|ref|YP_277923.1| hypothetical protein BPEN_424 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796509|gb|AAZ41260.1| putative exported protein [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 315

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 49/196 (25%), Gaps = 46/196 (23%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPI-LHSRINRIMFNPY 243
           L+        +++N     L    E     +   + +G +   TP    + I        
Sbjct: 91  LILPNTPHSGIVINNAEMRLYYYPEKKNTVIVLPIAIGTIKNATPSHWITSITHKK--KP 148

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
             IP   ++ + +                                              G
Sbjct: 149 IWIPTKSMRDEYIKH----------------------------------GEILPTIFPAG 174

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP-T 362
             N M    +          H T     F   +R  T GC+R+R   D+  +L    P  
Sbjct: 175 SSNPMGLYALYLEKNYAI--HGTN--RNFGIGLR-ITRGCIRLR-PEDI-EYLFNIVPVG 227

Query: 363 WSRYHIEEVVKTRKTT 378
                I E VK+    
Sbjct: 228 TKVQFINEPVKSTVEK 243


>gi|283770491|ref|ZP_06343383.1| ctpA serine protease [Staphylococcus aureus subsp. aureus H19]
 gi|283460638|gb|EFC07728.1| ctpA serine protease [Staphylococcus aureus subsp. aureus H19]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 SKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|282916688|ref|ZP_06324446.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319175|gb|EFB49527.1| ctpA-like serine protease [Staphylococcus aureus subsp. aureus
           D139]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 SKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|323484631|ref|ZP_08089993.1| hypothetical protein HMPREF9474_01744 [Clostridium symbiosum
           WAL-14163]
 gi|323694833|ref|ZP_08108988.1| spore cortex-lytic enzyme SleC [Clostridium symbiosum WAL-14673]
 gi|323402014|gb|EGA94350.1| hypothetical protein HMPREF9474_01744 [Clostridium symbiosum
           WAL-14163]
 gi|323501149|gb|EGB17056.1| spore cortex-lytic enzyme SleC [Clostridium symbiosum WAL-14673]
          Length = 427

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLD 152
             P   L +G+S   V++++E+L  I +     P   +   +      +VK+FQ   GL 
Sbjct: 341 SFPGTNLTIGSSGDKVRQMQEQLDTIATVYSSIPRVAIDGIYGPATAESVKVFQSVFGLP 400

Query: 153 PSGMVDSSTLEAMN 166
            +G+VD +T   ++
Sbjct: 401 QTGVVDFATWYKIS 414


>gi|86738799|ref|YP_479199.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3]
 gi|86565661|gb|ABD09470.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3]
          Length = 231

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 26/118 (22%)

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR-------QDPGKINAMASTKIEFYSRN 319
             + + +    G ++  E V   + + P    R       +                +  
Sbjct: 116 SRHRLQVF-SNGTQIAEEPVGIGTADTPTPGGRFYLMELLKPRDPNGPYGPYAFGL-NGF 173

Query: 320 N------------TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
           +              +H T EP L        + GC+R+ N  I  L   +   TP  
Sbjct: 174 STSLSSFGGHKPVIGVHGTNEPKLIGKD---VSHGCIRLSNDAITRLAQTVPLGTPID 228


>gi|218290950|ref|ZP_03495007.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius LAA1]
 gi|218239115|gb|EED06318.1| spore cortex-lytic enzyme [Alicyclobacillus acidocaldarius LAA1]
          Length = 267

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                R L  G++   V  L+ RL + G       +   F      AV+ FQ   GL  +
Sbjct: 31  QAFTARNLIYGSTGYDVDELQGRLHLLGYY--WGRIDGIFGWKTYWAVRTFQYNFGLPVT 88

Query: 155 GMVDSST 161
           G VD  T
Sbjct: 89  GEVDMRT 95


>gi|315658324|ref|ZP_07911196.1| carboxy-terminal processing protease CtpA [Staphylococcus
           lugdunensis M23590]
 gi|315496653|gb|EFU84976.1| carboxy-terminal processing protease CtpA [Staphylococcus
           lugdunensis M23590]
          Length = 483

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G+++  V+ ++  L   G    ++     FD  +E A+K FQ  + L  +G  D  
Sbjct: 398 SYHKGDNNKHVKAMKIGLTALGYKVDNESKD--FDDNLEQAIKAFQQDNNLTVNGQFDKE 455

Query: 161 TLEAMNVPVDLRIRQ 175
           T +   V +  +  +
Sbjct: 456 TNDKFTVQLVEKANK 470


>gi|289550827|ref|YP_003471731.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180359|gb|ADC87604.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus lugdunensis HKU09-01]
          Length = 483

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             H G+++  V+ ++  L   G    ++     FD  +E A+K FQ  + L  +G  D  
Sbjct: 398 SYHKGDNNKHVKAMKIGLTALGYKVDNESKD--FDDNLEQAIKAFQQDNNLTVNGQFDKE 455

Query: 161 TLEAMNVPVDLRIRQ 175
           T +   V +  +  +
Sbjct: 456 TNDKFTVQLVEKANK 470


>gi|312621329|ref|YP_004022942.1| carboxyl-terminal protease [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201796|gb|ADQ45123.1| carboxyl-terminal protease [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 472

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL   G L          D    +A+K FQ  + L P G++
Sbjct: 380 ATKKYKKGDMDLEVLAAQQRLFYLGYLSSWTA---KMDDNTVAAIKKFQKDNKLYPYGVL 436

Query: 158 DSSTLEAMNVPVDL 171
           D +T + +N     
Sbjct: 437 DVTTQKKLNEKFSE 450


>gi|282927518|ref|ZP_06335135.1| carboxyl-terminal processing protease [Staphylococcus aureus A9765]
 gi|282592058|gb|EFB97084.1| carboxyl-terminal processing protease [Staphylococcus aureus A9765]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|326202807|ref|ZP_08192674.1| spore cortex-lytic enzyme [Clostridium papyrosolvens DSM 2782]
 gi|325986884|gb|EGD47713.1| spore cortex-lytic enzyme [Clostridium papyrosolvens DSM 2782]
          Length = 231

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 40/94 (42%), Gaps = 4/94 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L +G++   V+ +++ L   G  D    +   F      +V  +Q ++GL  +G+ 
Sbjct: 30  SAPSLKIGDNGDKVKDMQQELKNWGYFD--GQVDGRFGYDTLRSVLNYQRQYGLKANGVA 87

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           D +TL  + + +   I    VN      +  +++
Sbjct: 88  DRTTL--LTMGLAELIESGTVNAASKSNISNEQL 119


>gi|253732059|ref|ZP_04866224.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253724192|gb|EES92921.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|229028554|ref|ZP_04184671.1| hypothetical protein bcere0028_6680 [Bacillus cereus AH1271]
 gi|228732772|gb|EEL83637.1| hypothetical protein bcere0028_6680 [Bacillus cereus AH1271]
          Length = 253

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +    +H T       +     ++GC+R+
Sbjct: 67  TKFKNKEYHRKKIPGGAPNNPLGTRWLGLDKKE-YAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|87160602|ref|YP_494010.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195151|ref|YP_499952.1| hypothetical protein SAOUHSC_01427 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|151221544|ref|YP_001332366.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509587|ref|YP_001575246.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|221142075|ref|ZP_03566568.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258451079|ref|ZP_05699114.1| carboxyl-terminal protease [Staphylococcus aureus A5948]
 gi|284024420|ref|ZP_06378818.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           132]
 gi|294850746|ref|ZP_06791464.1| carboxyl-terminal processing protease [Staphylococcus aureus A9754]
 gi|304381001|ref|ZP_07363658.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|87126576|gb|ABD21090.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202709|gb|ABD30519.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|150374344|dbj|BAF67604.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368396|gb|ABX29367.1| S41A family carboxy-terminal peptidase [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|257861134|gb|EEV83947.1| carboxyl-terminal protease [Staphylococcus aureus A5948]
 gi|269940915|emb|CBI49299.1| putative protease [Staphylococcus aureus subsp. aureus TW20]
 gi|294822386|gb|EFG38837.1| carboxyl-terminal processing protease [Staphylococcus aureus A9754]
 gi|302751250|gb|ADL65427.1| serine protease [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340477|gb|EFM06414.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|315195854|gb|EFU26222.1| S41A family carboxy-terminal peptidase [Staphylococcus aureus
           subsp. aureus CGS01]
 gi|320140334|gb|EFW32191.1| peptidase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142665|gb|EFW34468.1| peptidase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314097|gb|AEB88510.1| Carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329730570|gb|EGG66956.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21189]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|57650378|ref|YP_186306.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           COL]
 gi|81694508|sp|Q5HG01|CTPAL_STAAC RecName: Full=Probable CtpA-like serine protease
 gi|57284564|gb|AAW36658.1| carboxyl-terminal protease [Staphylococcus aureus subsp. aureus
           COL]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDKALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|330448768|ref|ZP_08312415.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492959|dbj|GAA06912.1| putative peptidoglycan binding domain protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 522

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G +   V  L ++L     L  +      FD  V   ++ FQ    L   G+    
Sbjct: 444 SIRFGQNGPRVAWLDQQLND--FLGENSPRKGYFDQSVLDKLRRFQRSQDLTADGIAGPM 501

Query: 161 TL 162
           TL
Sbjct: 502 TL 503


>gi|301056523|ref|YP_003794734.1| hypothetical protein BACI_c50430 [Bacillus anthracis CI]
 gi|300378692|gb|ADK07596.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 153

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|196047550|ref|ZP_03114760.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|196021664|gb|EDX60361.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 153

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKASTPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|167630819|ref|YP_001681318.1| peptidoglycan-binding domain protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167593559|gb|ABZ85307.1| peptidoglycan-binding domain protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 389

 Score = 53.1 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 98  PIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P  P    L  G++  +V+RL+  L  +  L     ++  +D   E+AV+ FQ   G++P
Sbjct: 169 PAGPTCPELGRGSTGEAVRRLQRLLDAAQYL---VTVTGVYDQATENAVRTFQSEVGINP 225

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
           +G  +  T  ++        R  +  + R+
Sbjct: 226 TGRANLETWLSLGESCGDLPRPPRHRITRV 255



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 5/103 (4%)

Query: 95  PELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  P      L LG    SV+RL++ L  SG       +   F     +AV   Q R   
Sbjct: 49  PASPGGLCPTLSLGARGASVRRLQQLLARSG--LNPGPIDGIFGTATRNAVIGLQRRQNR 106

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           +P+G+V+ S  +A+ +                +  +  +   R
Sbjct: 107 EPTGIVERSEWQALGINCARPPVPPFPRQPGQRPPVTPQPPRR 149


>gi|210631829|ref|ZP_03297071.1| hypothetical protein COLSTE_00961 [Collinsella stercoris DSM 13279]
 gi|210159949|gb|EEA90920.1| hypothetical protein COLSTE_00961 [Collinsella stercoris DSM 13279]
          Length = 302

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 12/89 (13%)

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +    W  L      LG+              VQ L+  L   G           F  + 
Sbjct: 60  VDGAAWSALVDASYKLGDRTLYLRLPNFHGADVQALQRALNTLGF--ACGVDDGFFGPHT 117

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+A++ FQ   GL   GM    T   +N 
Sbjct: 118 EAALQQFQENVGLFADGMAFQDTFAYINR 146



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-FDAYVESAVKLFQMRHGLDPSGMVD 158
             +  G    +V+ ++ RL   G        S   F     +AV+ F+   GL+P   VD
Sbjct: 2   ESIAQGMQGPAVEDVQTRLTSLGYTIDEAETSAKEFGTTSAAAVRAFRASQGLEPGDEVD 61

Query: 159 SSTLEAM 165
            +   A+
Sbjct: 62  GAAWSAL 68


>gi|297196973|ref|ZP_06914370.1| peptidoglycan binding domain-containing protein [Streptomyces
           sviceus ATCC 29083]
 gi|197717507|gb|EDY61541.1| peptidoglycan binding domain-containing protein [Streptomyces
           sviceus ATCC 29083]
          Length = 250

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G  +  V+ ++ RL   G   P   +   F  +  +A + FQ  +GL   G+V + T 
Sbjct: 184 KTGTVAEGVKNIQRRLNELG-WSPPLDVDGKFGPHSAAAARWFQTNNGLTADGIVGNQTW 242

Query: 163 EAMNVP 168
             +   
Sbjct: 243 RRLVDS 248


>gi|297583387|ref|YP_003699167.1| carboxyl-terminal protease [Bacillus selenitireducens MLS10]
 gi|297141844|gb|ADH98601.1| carboxyl-terminal protease [Bacillus selenitireducens MLS10]
          Length = 496

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P     PL    +S  V+  +  L  +G           FD     AV+ FQ   GLD +
Sbjct: 402 PISADEPLVFDMNSEHVESAQVMLAATGY--DPGREDGYFDEGTVEAVEAFQEAEGLDVT 459

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           G +   T + +   +  +I+  + +L   + L
Sbjct: 460 GEIGEETADRLQEVLIEQIQDRENDLQLKRAL 491


>gi|254559326|ref|YP_003066421.1| hypothetical protein METDI0732 [Methylobacterium extorquens DM4]
 gi|254266604|emb|CAX22374.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 282

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 45/193 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             V           NL R+     +++    V+       L  V  G   +R  V VG+ 
Sbjct: 53  FPVEAVDPRNLKARNLRRLVDYPTKELPGTLVVDPHGRF-LYLVMEGGKAMRYGVGVGKA 111

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             +     + + R    P W     +I++D     R                        
Sbjct: 112 GFE-FTGEATVARKASWPRWTPTPDMIRRDPTRNGRWAGG-------------------- 150

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETS 341
                             G  N + +  +      ++  Y +H T EP          +S
Sbjct: 151 ---------------MPGGDRNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AVSS 192

Query: 342 GCVRV--RNIIDL 352
           GC+R+  +++IDL
Sbjct: 193 GCIRMLNQDVIDL 205


>gi|315268212|gb|ADT95065.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS678]
          Length = 273

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ L++RL  +G    S  +   F    + A++ FQ +  L  +G     
Sbjct: 2   TLRKGSNGSQVRDLQQRLNAAG---ASLVVDGWFGDATQKAIEQFQDKQDLPRTGYAGVR 58

Query: 161 TLE 163
           TL 
Sbjct: 59  TLA 61


>gi|223043295|ref|ZP_03613342.1| carboxy- processing protease [Staphylococcus capitis SK14]
 gi|222443506|gb|EEE49604.1| carboxy- processing protease [Staphylococcus capitis SK14]
          Length = 492

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  HLG+ + +V+ ++  L   G        S  FD+ +ESA+K FQ  + L+ +G  D 
Sbjct: 406 KTYHLGDENKNVKTMKIGLTALGY--KVNNESNQFDSELESAIKSFQKDNHLEVTGKFDK 463

Query: 160 ST 161
           +T
Sbjct: 464 TT 465


>gi|110677878|ref|YP_680885.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
 gi|109453994|gb|ABG30199.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
          Length = 219

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 27/161 (16%)

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYL 266
             +                   P     +   +     ++P  I    +   L       
Sbjct: 34  VWDARVTPANYDPATTNPWGLHPRF---LPVRVEANSGLVPGDIHVDAVARYLYHVQGDG 90

Query: 267 KDNNIHMIDEKGKEVFVE------EVDWNSPEPPNFIFRQDP------------GKINAM 308
                 +   +G            +  W    P   + R+DP            G  N +
Sbjct: 91  TAMRYGVAIARGNLYEPGVFTIRRKARWPKWTPTAEMIRRDPELYTEFADGMPGGPDNPL 150

Query: 309 ASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
            +  +     +R+    +H TP P    +     +SGCVR+
Sbjct: 151 GARALYLYEGNRDTYLRIHGTPSPRSIGSR---ASSGCVRM 188


>gi|323137954|ref|ZP_08073028.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396673|gb|EFX99200.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 190

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 41/153 (26%), Gaps = 44/153 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V      L  V      +   V VGR    T      + R    P W  P  ++++  
Sbjct: 62  IVVATKQRRLYYVLGDGQAIEYGVGVGREG-FTWSGTKTVTRKREWPDWRPPPQMLKRR- 119

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+       G  N + +  +  
Sbjct: 120 --------------------------------------PDLPRHMAGGMENPLGARALYL 141

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC+R+ N
Sbjct: 142 GSSE-YRIHGSNEPDTIGA---AVSSGCIRMTN 170


>gi|281417038|ref|ZP_06248058.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
 gi|281408440|gb|EFB38698.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum JW20]
          Length = 230

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 17/103 (16%)

Query: 265 YLKDNNIHMID---EKGKEVFVEEVD-WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           YL  + + +       GK         W      ++              + +       
Sbjct: 46  YLYKDGVLLKTYPVSGGKPETPSPEGTWKIISKSDW--------GGNFGGSWMGLNVPWG 97

Query: 321 -TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
              +H T  P          + GC+R+  +N  +L   +   T
Sbjct: 98  QYGIHGTKYPWYIGRQN--ASHGCIRMYNKNAKELYDIVPYGT 138



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L  G+    V ++++ L   G        S  F   ++ +V  FQ  + +  +G V
Sbjct: 148 PFKELKSGDVGSDVLKVQKALKKLGYFH--DWPSGKFQDNLKKSVIKFQKNNKIKVTGTV 205

Query: 158 DSSTLEAMNVPVDLRIR 174
           + S    +    + +++
Sbjct: 206 NKSLYNLIMKKYEEKMQ 222


>gi|92119139|ref|YP_578868.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91802033|gb|ABE64408.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 199

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 44/177 (24%), Gaps = 46/177 (25%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           QL     +   L         +++      L  ++     +R  + VGR   Q       
Sbjct: 46  QLDPEYRKQVVLYRTTEPPGTIIIQTAERHLYLIQGNGRAIRYGIGVGREGFQ-WQGILN 104

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I R    P W  P  +I++                                        P
Sbjct: 105 ITRKAEWPDWTPPPEMIKRQ---------------------------------------P 125

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
                   G  N + +  +        Y +H T  P          +SGC R+ N  
Sbjct: 126 YLPRFMAGGPGNPLGARAMYL--GTTVYRIHGTNRPDTIGT---AISSGCFRLVNAD 177


>gi|325916291|ref|ZP_08178569.1| putative peptidoglycan binding protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537462|gb|EGD09180.1| putative peptidoglycan binding protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 268

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
           P +    + +G SS  V++++  L   G              +   ++ AV  +Q   GL
Sbjct: 38  PIVDDGTIRIGESSDIVRQVQRTLNAEGFRGADNQPLQEDGVYRLSMQPAVINYQQARGL 97

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            P+G +D +TL+ +      R+   ++N
Sbjct: 98  SPTGDIDPATLQQI----APRVFPPELN 121


>gi|226314867|ref|YP_002774763.1| carboxyl-terminal processing protease precursor [Brevibacillus
           brevis NBRC 100599]
 gi|226097817|dbj|BAH46259.1| putative carboxyl-terminal processing protease precursor
           [Brevibacillus brevis NBRC 100599]
          Length = 466

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L    +   V+ L+  LI+ G           FD   E A+K FQ    L+ +G V
Sbjct: 374 ADKVLQRDMAGTDVKNLQ--LILKGLNLSPGREDGYFDEKTEEAIKQFQTSSKLEVTGKV 431

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
           D+ T  ++   +   + + + +L   K L
Sbjct: 432 DAKTRSSLEESLRKTMTKPENDLQLQKAL 460


>gi|116249572|ref|YP_765410.1| putative ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115254220|emb|CAK03835.1| putative ErfK/YbiS/YhnG family protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 201

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 30/106 (28%), Gaps = 11/106 (10%)

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWN-----SPEPPNFIFRQDPGKINAMASTKIEFYS 317
           P  +                    +W        + P       PG  N + +  I    
Sbjct: 95  PIAVGREGKQWYGSTRVVSKRAHPEWRPTAGMRQKNPRLPAVVKPGPANPLGTRAIYLAD 154

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                +H T +P          +SGC R+  +++ +L   +   T 
Sbjct: 155 G-LLRIHGTNDPSSIGTN---ASSGCFRMYRQDVEELYEIVQPGTK 196


>gi|257413209|ref|ZP_04742330.2| spore cortex-lytic enzyme SleC [Roseburia intestinalis L1-82]
 gi|257204288|gb|EEV02573.1| spore cortex-lytic enzyme SleC [Roseburia intestinalis L1-82]
          Length = 427

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E   R+  S    P+      +      AV++FQ   G
Sbjct: 342 WPRV---DLTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 398

Query: 151 LDPSGMVDSSTL 162
           L  +G++D  T 
Sbjct: 399 LPVTGVIDYRTW 410


>gi|228957168|ref|ZP_04118935.1| hypothetical protein bthur0005_6940 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228802495|gb|EEM49345.1| hypothetical protein bthur0005_6940 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 219

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|229062697|ref|ZP_04200006.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH603]
 gi|229135863|ref|ZP_04264631.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST196]
 gi|229169750|ref|ZP_04297450.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH621]
 gi|228613789|gb|EEK70914.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH621]
 gi|228647603|gb|EEL03670.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST196]
 gi|228716667|gb|EEL68364.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH603]
          Length = 153

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  ++GK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTKINKMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMFNND--IHWLFER 143


>gi|146300718|ref|YP_001195309.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146155136|gb|ABQ05990.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 274

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 20/223 (8%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R + LG  S  V  L E L+  G    S  +S +F    + +V+ FQ+++ L   G+V  
Sbjct: 2   RTIKLGVKSNEVYYLNELLVKLGY---SIVVSDSFGTATDKSVRDFQLKNNLVVDGVVGL 58

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T   +             N    K L EQ +       N+    L  V+       +  
Sbjct: 59  KTWTVLLEKSK------NSNTSNSKLLSEQNLIDFAKQFNL---ELAVVKAVNEVESNGK 109

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
                 R   +    +         + P        +  L ++    +  N        +
Sbjct: 110 GFLVDGRPKILFEGHVFWKQLENRNIDP-----HIYVNTLNENI-LFEKYNRKYYVGGAE 163

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY 322
           E     ++  +    +  FR       +    +I  ++     
Sbjct: 164 EYNR--LEKAASLGADKKFRDAANCSASWGLFQIMGFNAVPIG 204


>gi|313200752|ref|YP_004039410.1| erfk/ybis/ycfs/ynhg family protein [Methylovorus sp. MP688]
 gi|312440068|gb|ADQ84174.1| ErfK/YbiS/YcfS/YnhG family protein [Methylovorus sp. MP688]
          Length = 164

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
           N +         +   Y+H TP+  L        + GCVR+RN  +I L   +   TP W
Sbjct: 103 NRLGQVD---SMQRYIYIHGTPDTELMGV---AASHGCVRMRNTDVITLFDLVPVGTPVW 156

Query: 364 SRYH 367
               
Sbjct: 157 LEDD 160


>gi|312881706|ref|ZP_07741483.1| general secretion pathway protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370596|gb|EFP98071.1| general secretion pathway protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 537

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 49/155 (31%), Gaps = 13/155 (8%)

Query: 31  IHASVLDEIINESYHSIV-------NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           +    ++ ++N     +V        +RF       D  +   I    +   +   KA+ 
Sbjct: 383 LSQGDIETLLN-LNRPVVLSLLIDSEERFAVLYGLSDSRVKLLI---GERVFSFDRKALN 438

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
                     W     R L LG     V  L + L  +  L      S  F+  + + V+
Sbjct: 439 LIWHGDYHQIWHSRWDRTLQLGMKGKDVISLDQSLSKA--LGKPISDSKEFNQQLLNKVR 496

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            FQ   GL+  G+    TL  +          L +
Sbjct: 497 EFQGWQGLNVDGIAGQQTLRHLERLSQPDAPSLTI 531


>gi|316936276|ref|YP_004111258.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603990|gb|ADU46525.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 195

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 30/107 (28%), Gaps = 8/107 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MH 324
            +   +  I  K +              P        G  N M +  +   S    Y +H
Sbjct: 93  FQWQGLLKISRKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNPMGARAMYLGS--TVYRIH 150

Query: 325 DTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYHIE 369
            T  P          +SGC R+ N    DL   +   T    R   E
Sbjct: 151 GTNRPDTIGT---AISSGCFRLVNADVMDLYDRVPVGTKVVVRQKPE 194


>gi|254384384|ref|ZP_04999726.1| hypothetical protein SSAG_04028 [Streptomyces sp. Mg1]
 gi|194343271|gb|EDX24237.1| hypothetical protein SSAG_04028 [Streptomyces sp. Mg1]
          Length = 120

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
            R L   ++   V  L+ RL   G    S  L   +D +++ A + FQ ++G+     G+
Sbjct: 49  KRTLRRHDTGPEVVDLQRRLAQLGLW--SLPLRGRYDRHLDDAAQRFQAKYGVRGDPPGV 106

Query: 157 VDSSTLEAMN 166
              +T + + 
Sbjct: 107 YGPATRQRLE 116


>gi|297204538|ref|ZP_06921935.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297148725|gb|EFH29093.1| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 509

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   V  L+  L   G    S  +  +F     +AVK FQ   GL   G V  +T  A
Sbjct: 198 GQSGGCVATLQSLLNGKG---HSLDVDGSFGPQTLAAVKAFQSASGLSADGEVGPNTKAA 254

Query: 165 M 165
           +
Sbjct: 255 L 255



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     V  L+  LI  G +     +   F A   SAV+ FQ  HGL   G V ++T
Sbjct: 113 LVQGAKGGCVTELQRLLIHHGYV---VDVDGDFGAGTASAVRSFQSAHGLTVDGQVGTNT 169

Query: 162 LEAM 165
             A+
Sbjct: 170 KRAL 173



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V  L+  L   G       +   F    +SAV+ FQ   GL   G V  +T  A
Sbjct: 285 GQHSGCVTELQSLLNHHG---ADLAVDGDFGPLTDSAVRDFQSEKGLSVDGQVGPNTKAA 341

Query: 165 M 165
           +
Sbjct: 342 L 342



 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 3/75 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +S  V  L+  L   G       +   F +    AV+ +Q    +   G V  +T   
Sbjct: 34  GQASGCVTELQRLLNAHG---AGLAVDGQFGSATLYAVREYQAATAIAVDGRVGPATKSK 90

Query: 165 MNVPVDLRIRQLQVN 179
           +          + +N
Sbjct: 91  LYATGGSAPAPVSLN 105


>gi|291539241|emb|CBL12352.1| Putative peptidoglycan-binding domain-containing protein [Roseburia
           intestinalis XB6B4]
          Length = 419

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E   R+  S    P+      +      AV++FQ   G
Sbjct: 334 WPRV---DLTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 390

Query: 151 LDPSGMVDSSTL 162
           L  +G++D  T 
Sbjct: 391 LPVTGVIDYRTW 402


>gi|218679421|ref|ZP_03527318.1| hypothetical protein RetlC8_11271 [Rhizobium etli CIAT 894]
          Length = 116

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
            + +       Q+ G+ N + +  +      R+  + +H T +P      +   +SGC+R
Sbjct: 13  EAAKGHIIPAYQEGGEDNPLGARAMYLYQGGRDTIFRIHGTNQPWTIGLNM---SSGCIR 69

Query: 346 VRN 348
           + N
Sbjct: 70  MMN 72


>gi|163742752|ref|ZP_02150137.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
 gi|161384007|gb|EDQ08391.1| ErfK/YbiS/YcfS/YnhG family protein [Phaeobacter gallaeciensis 2.10]
          Length = 199

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 54/182 (29%), Gaps = 47/182 (25%)

Query: 179 NLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRIN 236
           +  +         +G+  +L +I + +L     +G         V   +  T   ++++ 
Sbjct: 52  SFQQQAWQDHFDELGVGCMLADISSRALHYWGGDGVTYRLFPSSVPMTEELTKRGYTKVV 111

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           R   NP W    S+ ++D                                       P+ 
Sbjct: 112 RKAKNPSWTPTASMRERD---------------------------------------PSL 132

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
             R + G  N + +  +         +H T +        R  +SGC+ + N  +  L  
Sbjct: 133 PLRMEGGAGNPLGTRAMYLSWP-AYLVHGTHDTRKIG---RQSSSGCIGLYNQHVEALYE 188

Query: 355 WL 356
            +
Sbjct: 189 MV 190


>gi|228951250|ref|ZP_04113362.1| hypothetical protein bthur0006_6730 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228808448|gb|EEM54955.1| hypothetical protein bthur0006_6730 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 226

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 40  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 95

Query: 347 RN 348
            +
Sbjct: 96  HD 97


>gi|229188960|ref|ZP_04315989.1| hypothetical protein bcere0002_6470 [Bacillus cereus ATCC 10876]
 gi|228594510|gb|EEK52300.1| hypothetical protein bcere0002_6470 [Bacillus cereus ATCC 10876]
          Length = 226

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 40  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 95

Query: 347 RN 348
            +
Sbjct: 96  HD 97


>gi|73662628|ref|YP_301409.1| carboxy-terminal processing protease [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
 gi|94709230|sp|Q49XN1|CTPAL_STAS1 RecName: Full=Probable CtpA-like serine protease
 gi|72495143|dbj|BAE18464.1| carboxy-terminal processing protease [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 491

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 2/78 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +   LG+   +V+ ++  L + G        S  FD+ +E A+K FQ ++ LD +G  
Sbjct: 403 SNKTYQLGDDDKNVKTMKVGLNVLGY--HINNHSTEFDSELEDALKSFQKKNNLDVNGTF 460

Query: 158 DSSTLEAMNVPVDLRIRQ 175
           + ST E     +  +  +
Sbjct: 461 NKSTNEKFTQQLVEKANK 478


>gi|120536902|ref|YP_956960.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120326736|gb|ABM21045.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 528

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++         S   V++L+E L           +   F      A+K  Q  HGLD +G
Sbjct: 368 KVADIKTKPPKSPKEVKQLQETLKALNY--RPGPVDGIFGKQTRWAIKRLQQEHGLDITG 425

Query: 156 MVDSSTLEAMNVPVD 170
            ++  TL A+  P  
Sbjct: 426 WLNPETLAALENPKK 440


>gi|110347210|ref|YP_666028.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110283321|gb|ABG61381.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 199

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 66/201 (32%), Gaps = 47/201 (23%)

Query: 166 NVPVDLRIRQLQVN--LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
            VPV L     +V+    + +   +       ++VN     L  VE G   +R  V VG 
Sbjct: 33  PVPVALNAENYRVDPRYRKQRVPYDGGEAPGTIVVNTSEFYLYHVEEGGWAMRYGVGVGE 92

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               T    ++I R    P W    ++               L+     +    G E   
Sbjct: 93  QG-LTLKGKAKIGRKAEWPSWTPTANM---------------LRRKPHLVQYAGGVE--- 133

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
                              G  N + +  +      R+  + +H T EP    N +   +
Sbjct: 134 ------------------GGLNNPLGARALYLYRGGRDTMFRIHGTNEPWSIGNAM---S 172

Query: 341 SGCVRVRNIIDLDVWLLKDTP 361
           SGC+R+ N  D+   L + TP
Sbjct: 173 SGCIRLTN-DDIVD-LYERTP 191


>gi|260462745|ref|ZP_05810950.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031389|gb|EEW32660.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 205

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 8/90 (8%)

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDT 326
           +I +  E        ++    PE   F    +PG  N + +  +  +++       +H +
Sbjct: 108 HIAIKREWPTWTPPSQMIKRQPELAKFASGMEPGLKNPLGARAMYLFNKGGDMGYRLHGS 167

Query: 327 PEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           PE       +   +SGC+R+  +++IDL  
Sbjct: 168 PEWNSIGKAM---SSGCIRLMNQDVIDLYD 194


>gi|125972839|ref|YP_001036749.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|256005881|ref|ZP_05430828.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|125713064|gb|ABN51556.1| ErfK/YbiS/YcfS/YnhG [Clostridium thermocellum ATCC 27405]
 gi|255990150|gb|EEU00285.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           2360]
 gi|316940925|gb|ADU74959.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium thermocellum DSM
           1313]
          Length = 230

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 17/103 (16%)

Query: 265 YLKDNNIHMID---EKGKEVFVEEVD-WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           YL  + + +       GK         W      ++              + +       
Sbjct: 46  YLYKDGVLLKTYPVSGGKPETPSPEGTWKIISKSDW--------GGNFGGSWMGLNVPWG 97

Query: 321 -TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
              +H T  P          + GC+R+  +N  +L   +   T
Sbjct: 98  QYGIHGTKYPWYIGRQN--ASHGCIRMYNKNAKELYDIVPYGT 138



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P + L  G+    V ++++ L   G        S  F   ++ +V  FQ  + +  +G V
Sbjct: 148 PFKELKSGDVGSDVLKVQKALKKLGYFH--DWPSGKFQDNLKKSVIKFQKDNKIKVTGTV 205

Query: 158 DSSTLEAMNVPVDLRIR 174
           + S    +    + +++
Sbjct: 206 NKSLYNLIMKKYEEKMQ 222


>gi|297804958|ref|XP_002870363.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316199|gb|EFH46622.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+   G++ +
Sbjct: 184 TLKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVREDGIMTA 243

Query: 160 STLEAM 165
             L+ +
Sbjct: 244 ELLQRL 249


>gi|228910869|ref|ZP_04074678.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis IBL 200]
 gi|228848820|gb|EEM93665.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis IBL 200]
          Length = 153

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGK---ATTLGCIRMYNND--IHWLFER 143


>gi|323135942|ref|ZP_08071025.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322399033|gb|EFY01552.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 205

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 52/186 (27%), Gaps = 46/186 (24%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A     D R + + +   R     + K     V+++     L  V      +R  V VG
Sbjct: 46  AAAPQTQDGRPQAVAIP--REVVSFDAKYAPGTVVISTNERRLYYVLGDGQAIRYGVGVG 103

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R   +       I+     P W  P  ++++                             
Sbjct: 104 RPGFE-WSGTRFISSKREWPDWTPPAQMLKRR---------------------------- 134

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                      P+     + G  N + +  +         +H + EP          +SG
Sbjct: 135 -----------PDLPRHMEGGLNNPLGARAMYLS-GTLYRIHGSNEPETIGQ---AVSSG 179

Query: 343 CVRVRN 348
           C+R+ N
Sbjct: 180 CIRMTN 185


>gi|291537294|emb|CBL10406.1| Putative peptidoglycan-binding domain-containing protein [Roseburia
           intestinalis M50/1]
          Length = 419

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           WP +    L +G++   V++++E   R+  S    P+      +      AV++FQ   G
Sbjct: 334 WPRV---DLTIGSTGEKVRQIQEELARISRSYPAIPTVTPDGIYGPATREAVEVFQRVFG 390

Query: 151 LDPSGMVDSSTL 162
           L  +G++D  T 
Sbjct: 391 LPVTGVIDYRTW 402


>gi|289644092|ref|ZP_06476188.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
 gi|289506092|gb|EFD27095.1| Peptidoglycan-binding domain 1 protein [Frankia symbiont of Datisca
           glomerata]
          Length = 146

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   VQ ++  L   G    S  +   F    E+AV+ FQ   G+   G V   +  A
Sbjct: 11  GSSGEPVQTIQYLLRAHGY---SVTVDGVFGPATEAAVRAFQSSAGIVVDGAVGDQSWPA 67

Query: 165 MNVPVDL 171
           + + V  
Sbjct: 68  LIITVRD 74



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNS---SVSVQRLRERL-IISGD 123
           P       A    A       +    WP L    +  G+      +V+ ++++      D
Sbjct: 39  PATEAAVRAFQSSAGIVVDGAVGDQSWPALI-ITVRDGDRSEKGDAVRAVQDQANARISD 97

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                 +   F    ++ V+ FQ   G+   G+V  +T   +   
Sbjct: 98  PGNFLPVDGVFGRRTDAWVRGFQQHAGITVDGIVGPTTWNRLVKD 142


>gi|229149086|ref|ZP_04277327.1| hypothetical protein bcere0011_6510 [Bacillus cereus m1550]
 gi|228634285|gb|EEK90873.1| hypothetical protein bcere0011_6510 [Bacillus cereus m1550]
          Length = 219

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|206967885|ref|ZP_03228841.1| conserved domain protein [Bacillus cereus AH1134]
 gi|229177277|ref|ZP_04304661.1| hypothetical protein bcere0005_6490 [Bacillus cereus 172560W]
 gi|206736805|gb|EDZ53952.1| conserved domain protein [Bacillus cereus AH1134]
 gi|228606156|gb|EEK63593.1| hypothetical protein bcere0005_6490 [Bacillus cereus 172560W]
          Length = 219

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|229068435|ref|ZP_04201736.1| hypothetical protein bcere0025_6490 [Bacillus cereus F65185]
 gi|229078057|ref|ZP_04210663.1| hypothetical protein bcere0023_7460 [Bacillus cereus Rock4-2]
 gi|228705243|gb|EEL57623.1| hypothetical protein bcere0023_7460 [Bacillus cereus Rock4-2]
 gi|228714577|gb|EEL66451.1| hypothetical protein bcere0025_6490 [Bacillus cereus F65185]
          Length = 219

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|86139270|ref|ZP_01057840.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
 gi|85824114|gb|EAQ44319.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
          Length = 193

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 298 FRQDPGKINAMASTKIEFY-SRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           + Q  G  N + +  +  Y +  +TY  +H T +P    +     ++GC+R+   ++ DL
Sbjct: 124 YVQPGGPDNPLGARALYLYQNGVDTYFRIHGTTQPETIGSS---ASNGCIRMLNEHVTDL 180

Query: 353 DVWLLKDTP 361
              +   T 
Sbjct: 181 YERVPIGTK 189


>gi|217979967|ref|YP_002364114.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217505343|gb|ACK52752.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 257

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 49/187 (26%)

Query: 170 DLRIRQLQVNLMRIK---KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
           D R  +L VN  +                ++++  +  L  V+ G   ++  + VGR   
Sbjct: 97  DPRSSELAVNHNQRTAMVVPNPTNEPPGTIVIDTHSRHLYLVQPGGRAIQYGIGVGRQGF 156

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +     +RI R    P W+ P+ ++ +                                 
Sbjct: 157 E-WKGTARIGRKAEWPRWIPPKEMLARR-------------------------------- 183

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                  P+     D G  N + +  +     +++  + +H T EP          +SGC
Sbjct: 184 -------PDLPDSMDGGLENPLGARALYLYQGNKDTLFRIHGTNEPNTIGQ---AVSSGC 233

Query: 344 VRVRNII 350
           +R+ N  
Sbjct: 234 IRMMNAD 240


>gi|218517106|ref|ZP_03513946.1| hypothetical protein Retl8_27948 [Rhizobium etli 8C-3]
          Length = 210

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 47/187 (25%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 67  LYVIMENKTAIRYGVGVGREGFK-WFGRATIDAKSLWPRWTPPPEMRKRH---------- 115

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 116 ----------------------------PELPEFVDGGSPKNPLGPRAMYLHRDGVDTGY 147

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
             H T EP          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +
Sbjct: 148 RFHGTLEPWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIADQAESTTQ 202

Query: 382 LATEVPV 388
           ++   PV
Sbjct: 203 VSQTTPV 209


>gi|39937854|ref|NP_950130.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|192293639|ref|YP_001994244.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39651714|emb|CAE30236.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
 gi|192287388|gb|ACF03769.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 197

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 51/192 (26%), Gaps = 48/192 (25%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +             ++V      L  V+     LR  + VGR    T     +I+R   
Sbjct: 50  QKQMVYFRTTEAPGTIIVQTSERYLYLVQGNNRALRYGIGVGREG-FTWQGLLKISRKAE 108

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P WV P  +IQ+                                        P      
Sbjct: 109 WPDWVPPPEMIQRQ---------------------------------------PYLPRFM 129

Query: 301 DPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLL 357
             G  N + +  +   S    Y +H T  P          +SGC R+ N    DL   + 
Sbjct: 130 AGGPGNPLGARAMYLGS--TVYRIHGTNRPDTIGT---AISSGCFRLVNADVMDLYARVP 184

Query: 358 KDTPTWSRYHIE 369
             T    R   E
Sbjct: 185 VGTKVVVRQRPE 196


>gi|33863542|ref|NP_895102.1| hypothetical protein PMT1274 [Prochlorococcus marinus str. MIT
           9313]
 gi|33640991|emb|CAE21449.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 219

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 43/158 (27%), Gaps = 51/158 (32%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +  + +G+      V +G     TP    ++   + NP +   +S             
Sbjct: 99  REISVIRDGEKLGPWPVAIGDPRTPTPTGVFKVENKVINPQYQSTKS------------- 145

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN 320
                             V                     G  + +    I F    +N 
Sbjct: 146 ----------------GRVNPAI-----------------GVASPLGDRWIGFLQSGQNQ 172

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
             +H TP P   N      T+GCVR+   ++  L   +
Sbjct: 173 FGIHGTPWPYWVN-AKAAVTNGCVRMLHAHVRQLFDVV 209


>gi|229042620|ref|ZP_04190361.1| hypothetical protein bcere0027_6830 [Bacillus cereus AH676]
 gi|229126184|ref|ZP_04255202.1| hypothetical protein bcere0015_6440 [Bacillus cereus BDRD-Cer4]
 gi|229143473|ref|ZP_04271899.1| hypothetical protein bcere0012_6410 [Bacillus cereus BDRD-ST24]
 gi|296501494|ref|YP_003663194.1| protein ErfK/SrfK precursor [Bacillus thuringiensis BMB171]
 gi|228639975|gb|EEK96379.1| hypothetical protein bcere0012_6410 [Bacillus cereus BDRD-ST24]
 gi|228657176|gb|EEL12996.1| hypothetical protein bcere0015_6440 [Bacillus cereus BDRD-Cer4]
 gi|228726713|gb|EEL77929.1| hypothetical protein bcere0027_6830 [Bacillus cereus AH676]
 gi|296322546|gb|ADH05474.1| protein erfK/srfK precursor [Bacillus thuringiensis BMB171]
          Length = 219

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|222147895|ref|YP_002548852.1| hypothetical protein Avi_1187 [Agrobacterium vitis S4]
 gi|221734883|gb|ACM35846.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 251

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 42/191 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +Q+     R +           ++V+ P   L  VE G   +R  V +GR     
Sbjct: 86  PAIPYQQIPPRYYRQRVSDPTGYPAGSIVVDTPNRFLYLVEQGGTAMRYGVGIGREGFA- 144

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +     L +   Y   N                   
Sbjct: 145 WQGEGVIQWRQKWPKWTPPDEMVARQ--PQLAK---YSSANGGM---------------- 183

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG +N + +  +  F +  +    +H +PE       +   +SGCVR
Sbjct: 184 ------------APGLMNPLGARALYIFQNGQDTLYRLHGSPEWNSIGKAM---SSGCVR 228

Query: 346 V--RNIIDLDV 354
           +  ++IIDL  
Sbjct: 229 LMNQDIIDLYD 239


>gi|332716120|ref|YP_004443586.1| hypothetical protein AGROH133_11229 [Agrobacterium sp. H13-3]
 gi|325062805|gb|ADY66495.1| hypothetical protein AGROH133_11229 [Agrobacterium sp. H13-3]
          Length = 261

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            ++  +++    +R             ++V+     L         +R  V +GR   + 
Sbjct: 60  PEIPYKRIPRQFLRQMVENPTGERPGIIVVDTANHFLYLTYENNQAMRYGVGLGRAGFE- 118

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  +I +     L   P   ++  +                 
Sbjct: 119 WAGRGVIQYKRQWPRWTPPDEMIARQ--PELE--PYSGRNGGME---------------- 158

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +      ++  Y +H +PE           +SGCVR
Sbjct: 159 -------------PGLKNPLGARALYIFKDGKDTIYRLHGSPEWWTIGKS---VSSGCVR 202

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++I+DL   +   TP
Sbjct: 203 LLNQDIVDLYNRVPDGTP 220


>gi|229108356|ref|ZP_04237973.1| hypothetical protein bcere0018_6420 [Bacillus cereus Rock1-15]
 gi|228674983|gb|EEL30210.1| hypothetical protein bcere0018_6420 [Bacillus cereus Rock1-15]
          Length = 219

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++ PG    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIPGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|225575215|ref|ZP_03783825.1| hypothetical protein RUMHYD_03304 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037508|gb|EEG47754.1| hypothetical protein RUMHYD_03304 [Blautia hydrogenotrophica DSM
           10507]
          Length = 619

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 1/95 (1%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I++ G         L  G+   +V+  ++ LI  G      G    F    + A + FQ 
Sbjct: 376 IVTSGSSETPTKDFLCEGDQGEAVRVYQKNLISIGYDCGKNGADGDFGPATKEATQEFQG 435

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            +GL   G    +T   ++  +  +I Q Q    R
Sbjct: 436 DYGLVQDGNAGPATQAKLDAEIK-KIGQTQKGFAR 469


>gi|116253575|ref|YP_769413.1| ErfK/YbiS/YhnG oxidoreductase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258223|emb|CAK09324.1| putative ErfK/YbiS/YhnG oxidoreductase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 195

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 6/58 (10%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRVRNI 349
            +      G +N + +  +  Y         +H T  P       R  ++GC+R+ N 
Sbjct: 123 KYADGVPGGPLNPLGAAALYLYQGGQDTLFRLHGTNAPWSIG---RAVSNGCIRLTNA 177


>gi|158311949|ref|YP_001504457.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158107354|gb|ABW09551.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 408

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P R L  G     V+ L   L   G       +   FDA   SAV+ +Q + GL   G V
Sbjct: 167 PYRTLATGTVGSDVKELEASLQELGY--TGFAVDDTFDAATASAVQAWQAKSGLPAQGTV 224

Query: 158 DSSTLEAMNVPVDLRIRQLQV 178
               +   +  + + ++ + V
Sbjct: 225 SPDQIFVHDGDIRVALQAIPV 245


>gi|290956378|ref|YP_003487560.1| penicillin-binding membrane protein [Streptomyces scabiei 87.22]
 gi|260645904|emb|CBG68995.1| putative penicillin-binding membrane protein [Streptomyces scabiei
           87.22]
          Length = 356

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 16/108 (14%)

Query: 70  ISKETIAQTEKAIAFYQ----DILSRGGWPELPIR-----------PLHLGNSSVSVQRL 114
               T A+  +     +     I+    W  L               L  G+   +V++L
Sbjct: 245 FGPATDARVREYQRRVEIIVDGIVGPQTWGMLTDGELAQEASAGTPTLQQGSHGPAVRKL 304

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           + RL+     D    +   F    +  V+ FQ R  +   G+V   T 
Sbjct: 305 Q-RLLNDHLPDLQLAVDGRFGPVTDGRVRQFQQRFAIVVDGIVGPQTW 351


>gi|91228363|ref|ZP_01262290.1| putative general secretion pathway protein A [Vibrio alginolyticus
           12G01]
 gi|91188062|gb|EAS74367.1| putative general secretion pathway protein A [Vibrio alginolyticus
           12G01]
          Length = 538

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             L L     +++ L   L  +  +      +  FD  ++  V+LFQ   G+   G+   
Sbjct: 456 ETLRLDMEGPAIEVLDRLLAEA--VSEPLLETSIFDGAMKERVELFQRWQGIGVDGIAGK 513

Query: 160 STLEAMNVPVDLRIRQLQ 177
            TL+ +   V     QL 
Sbjct: 514 RTLDRLQQNVQPDAPQLA 531


>gi|303240529|ref|ZP_07327045.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
 gi|302591931|gb|EFL61663.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
            CD2]
          Length = 1456

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 11/99 (11%)

Query: 110  SVQRLRERLIISGDL-------DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             V  L+++L+  G L         ++     FD   + AV+ +Q   GL   G+VD  T 
Sbjct: 1016 DVIVLQKKLVTHGYLKMPIDQYTKTQVPFGTFDEVTKEAVEQYQSDKGLYVDGVVDKDTW 1075

Query: 163  EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             A+ +P D    Q      R         G     +  P
Sbjct: 1076 IALTLPWDNENAQ----PDRSSWTYGYIFGNNSFYMVNP 1110


>gi|229032672|ref|ZP_04188635.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1271]
 gi|228728671|gb|EEL79684.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1271]
          Length = 153

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|194100645|ref|YP_002003394.1| gp36 [Mycobacterium phage Predator]
 gi|192758361|gb|ACF05133.1| gp36 [Mycobacterium phage Predator]
          Length = 318

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 45/150 (30%), Gaps = 28/150 (18%)

Query: 34  SVLDEIINESY----------HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIA 83
           S +D+++ +                   F+   A    G +            +    + 
Sbjct: 105 SAVDQVVADFRGIIEFGGNWTSPRDEMHFELHFAEGHQGTEDLA--------NELRAGL- 155

Query: 84  FYQDILSRGGWPE-----LPIRPLHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDA 136
               I + GG P       P   L +G++   V  L++++                 F  
Sbjct: 156 --WGIWAPGGAPTDPPANTPDGYLQIGSTGDQVLYLQQKMNKVFGNYKAMPLDEDGIFGP 213

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              +AV  FQ R  +   G+V   T + + 
Sbjct: 214 MTANAVSEFQSRSLISVDGIVGPETKKRLA 243


>gi|218901943|ref|YP_002449777.1| hypothetical protein BCAH820_0825 [Bacillus cereus AH820]
 gi|218538030|gb|ACK90428.1| conserved domain protein [Bacillus cereus AH820]
          Length = 253

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEE----VDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             + ++ N      +   + +    E     ++    +  +          N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|163744000|ref|ZP_02151369.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161382760|gb|EDQ07160.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 158

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 295 NFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN--I 349
           +  + Q  G  N + +  +  F +  +TY  +H T +P    +     ++GC+R+ N  I
Sbjct: 86  DNKYIQPGGTDNPLGARALYLFQNGIDTYFRIHGTNQPQTIGHS---VSNGCIRMTNEHI 142

Query: 350 IDLDVWLLKDTP 361
           +DL   +   T 
Sbjct: 143 VDLYERVPLGTV 154


>gi|254426139|ref|ZP_05039856.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
 gi|196188562|gb|EDX83527.1| Putative peptidoglycan binding domain protein [Synechococcus sp.
           PCC 7335]
          Length = 1128

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 10/130 (7%)

Query: 101 PLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               G    S   V++ +  +   G       +   +    +S  + FQ + GLD  G+V
Sbjct: 712 TYRPGAEMISGNRVKQWQRAMRRQGY---DIAVDGIYGPQSQSVARQFQRKKGLDTDGIV 768

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
              T  A         RQ      +      +    +        A  E   N K     
Sbjct: 769 GPKTWAASLRSKPSNPRQ---ADAKEGWTNIKDNRPKPSNPRQADAK-EGWTNIKDNQSK 824

Query: 218 TVIVGRVDRQ 227
                R    
Sbjct: 825 PSNFPRPSNP 834



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 6/78 (7%)

Query: 101 PLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               G    S   V++ +  +   G       +   +    +S  + FQ + GLD  G+V
Sbjct: 592 TYRPGAEMISGNRVKQWQRAMRRQGY---DIAVDGIYGPQSQSVARQFQRKKGLDTDGIV 648

Query: 158 DSSTLEAMNVPVDLRIRQ 175
              T  A         RQ
Sbjct: 649 GPKTWAASLRSKPSNPRQ 666


>gi|147677831|ref|YP_001212046.1| hypothetical protein PTH_1496 [Pelotomaculum thermopropionicum SI]
 gi|146273928|dbj|BAF59677.1| Uncharacterized protein conserved in bacteria [Pelotomaculum
           thermopropionicum SI]
          Length = 412

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 305 INAMASTKIEF----YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            N +    +       + ++  +H   +P        + TSGCVR+ N   L  WL    
Sbjct: 93  ENPLGPRWLGLDALGTNGSSYGLHGNNDPPSIGT---YATSGCVRMHNQDIL--WLYDRV 147

Query: 361 PTWSRYHIEEVVKTRK 376
           P  +   I   + + +
Sbjct: 148 PVGTEVEI---INSGE 160


>gi|46203960|ref|ZP_00050704.2| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 194

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K     ++V+     L  V  G   +R  V VGR    +      I      
Sbjct: 52  RETVAYAGKEKPGTIVVSTSQRRLYYVLGGGEAIRYGVGVGRQG-FSWSGTKTITGKKEW 110

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 111 PAWRPPAQMLARR---------------------------------------PDLPRYMA 131

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G+ N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 132 GGQDNPLGARAMYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTN 174


>gi|327440793|dbj|BAK17158.1| cell wall hydrolyses [Solibacillus silvestris StLB046]
          Length = 260

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 2/71 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL        +  +   F      A++ FQ ++GL   G
Sbjct: 21  AFSGQDVQRGAFGDDVIELQARLQYLSYY--NGKIDGKFGYGTYWALRNFQEQYGLPVDG 78

Query: 156 MVDSSTLEAMN 166
           +   ST E + 
Sbjct: 79  IAGRSTKEKLE 89


>gi|320157464|ref|YP_004189843.1| general secretion pathway protein A/General secretion pathway
           protein B [Vibrio vulnificus MO6-24/O]
 gi|319932776|gb|ADV87640.1| general secretion pathway protein A / General secretion pathway
           protein B [Vibrio vulnificus MO6-24/O]
          Length = 718

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 10/110 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    ++  L + L  +  L+     +  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIAVLDQLLAKA--LNDEPLKTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            G+    TL         R++ +       ++  + +       +  P  
Sbjct: 514 DGIAGQRTLA--------RLQHMVSLSEPWREFTKAEKQGEEQAMRYPEF 555


>gi|212638914|ref|YP_002315434.1| germination-specific spore cortex-lytic enzyme [Anoxybacillus
           flavithermus WK1]
 gi|212560394|gb|ACJ33449.1| Germination-specific spore cortex-lytic enzyme [Anoxybacillus
           flavithermus WK1]
          Length = 305

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 2/92 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + +  G     V  L+ RL   G       +   F      A++ FQ +  L   G
Sbjct: 46  AFSKQVIQRGAVGDDVIELQARLQYLGFY--RGKIDGVFSWRTYWALRNFQYKFKLPVDG 103

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           +   +T + +          +  NL +     
Sbjct: 104 LAGEATKQKLVRASKYYKSFVHSNLRKGNTFT 135


>gi|251799935|ref|YP_003014666.1| peptidoglycan-binding protein [Paenibacillus sp. JDR-2]
 gi|247547561|gb|ACT04580.1| Peptidoglycan-binding domain 1 protein [Paenibacillus sp. JDR-2]
          Length = 336

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     +  ++  L   G    S  ++  +D      VK +Q  HGL  +G VDS T ++
Sbjct: 48  GAKGPDIYVIQGMLKGIG--SYSGKINGYYDNTTVRGVKHYQKTHGLPVTGSVDSKTFQS 105

Query: 165 MNVP 168
           +   
Sbjct: 106 ITYS 109


>gi|82751011|ref|YP_416752.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           RF122]
 gi|94708711|sp|Q2YXZ9|CTPAL_STAAB RecName: Full=Probable CtpA-like serine protease
 gi|82656542|emb|CAI80964.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           RF122]
          Length = 496

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENQVKAFQQTNKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|304391376|ref|ZP_07373318.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303295605|gb|EFL89963.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 261

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 11/152 (7%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
           +  +  K  LR  V     +R   IL   ++      Y + P     +  +A+ ++   +
Sbjct: 87  DYTKMNKRYLRQEVAYFGAERPGTIL---VDARRKFLYLIQPNKTAIRYGIAVGKEGYGW 143

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY- 322
             ++ +    +       +E+    PE   +      G  N + +  +      ++  Y 
Sbjct: 144 TGNSILQWKQKWPTWTPPKEMIERKPELAKYAEGLGGGSDNPLGARAMYLFKNGKDTLYR 203

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           +H T +P          +SGC R+  +++IDL
Sbjct: 204 IHGTNKPYSIGK---AASSGCFRMINQDVIDL 232


>gi|260462117|ref|ZP_05810361.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031977|gb|EEW33244.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 263

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 54/183 (29%), Gaps = 43/183 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + +L    +R             ++V+     L  V++G   +R  V +G+     
Sbjct: 70  PAIPVTKLDPKFVRQVVADPTGEKPGTIVVDTSEHFLYLVQDGGKAVRYGVSLGKAG-FG 128

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +IQ+     L +                           
Sbjct: 129 WTGSAVVQARKKWPVWTPPPEMIQRR--PELAK--------------------------- 159

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                  +     PG  + + +  +      ++  Y +H TPE           +SGCVR
Sbjct: 160 -------YKDGMPPGPKSPLGARALYLFRDGKDTMYRLHGTPEWDSIGKN---ASSGCVR 209

Query: 346 VRN 348
             N
Sbjct: 210 FMN 212


>gi|47567076|ref|ZP_00237793.1| protein erfK/srfK precursor [Bacillus cereus G9241]
 gi|47556394|gb|EAL14728.1| protein erfK/srfK precursor [Bacillus cereus G9241]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|323488226|ref|ZP_08093476.1| putative spore cortex-lytic enzyme precursor [Planococcus
           donghaensis MPA1U2]
 gi|323398084|gb|EGA90880.1| putative spore cortex-lytic enzyme precursor [Planococcus
           donghaensis MPA1U2]
          Length = 207

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              LH+G S   V+ L+ +L   G    S      +    ++AV  FQ    +  +G   
Sbjct: 28  APNLHVGVSGEGVKELQIKLKKLGYFSTSAT--GYYGPVTKNAVIEFQRDFNVSATGFTG 85

Query: 159 SSTLEAMN 166
             T   + 
Sbjct: 86  PLTRARLA 93


>gi|196036616|ref|ZP_03104010.1| conserved domain protein [Bacillus cereus W]
 gi|229120395|ref|ZP_04249642.1| hypothetical protein bcere0016_7070 [Bacillus cereus 95/8201]
 gi|195990816|gb|EDX54790.1| conserved domain protein [Bacillus cereus W]
 gi|228662980|gb|EEL18573.1| hypothetical protein bcere0016_7070 [Bacillus cereus 95/8201]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEE----VDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             + ++ N      +   + +    E     ++    +  +          N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|49480296|ref|YP_035009.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49331852|gb|AAT62498.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEE----VDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             + ++ N      +   + +    E     ++    +  +          N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|242092574|ref|XP_002436777.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
 gi|241915000|gb|EER88144.1| hypothetical protein SORBIDRAFT_10g008650 [Sorghum bicolor]
          Length = 370

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G     + ++++ L   G L   S G +  FDA +E A+K++Q   GLD +G +D+ST+ 
Sbjct: 59  GEQQQGLAKVKDYLSHFGYLPESSSGFNDLFDADLEEAIKVYQRNFGLDVTGAMDASTVA 118

Query: 164 AMNVP 168
            M  P
Sbjct: 119 QMMAP 123


>gi|229816539|ref|ZP_04446838.1| hypothetical protein COLINT_03592 [Collinsella intestinalis DSM
           13280]
 gi|229807874|gb|EEP43677.1| hypothetical protein COLINT_03592 [Collinsella intestinalis DSM
           13280]
          Length = 302

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W  L      LG+              V+ L+  L   G           F  + E+A++
Sbjct: 65  WSALVDESYKLGDRTLYLRLPNFHGADVRALQRALNTLGF--ACGVDDGYFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL   GM    T   +N 
Sbjct: 123 QFQENVGLFADGMAFQDTFNYVNR 146



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            P+  G    +V+ ++ RL   G + D ++  +  F A   +AV+ F+ + GLD    VD
Sbjct: 2   EPISQGMQGPAVEDVQTRLSSLGYMIDAAEMTAKEFGATTAAAVRAFRAQQGLDAGEDVD 61

Query: 159 SSTLEAM 165
            +   A+
Sbjct: 62  GTCWSAL 68


>gi|324328973|gb|ADY24233.1| hypothetical protein YBT020_25030 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|42784218|ref|NP_981465.1| hypothetical protein BCE_5172 [Bacillus cereus ATCC 10987]
 gi|42740149|gb|AAS44073.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|260426082|ref|ZP_05780061.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
 gi|260420574|gb|EEX13825.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
          Length = 186

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 52/196 (26%), Gaps = 53/196 (27%)

Query: 167 VPVDLRIRQLQV------NLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTV 219
           VP   R + +         +   +      +G   ++ +  + +L     +G        
Sbjct: 24  VPARARAQGILRHNISSFTMQDWRDHF-DTLGKASIVADTSSRALHFWSADGSDYRVYPT 82

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            V + D  T   ++ I R +  P W    S +++                          
Sbjct: 83  SVPKTDELTKRGYTEIVRKVVGPSWTPTASQMERYP------------------------ 118

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFE 339
                  DW             PG  N + +  +         +H T +        R  
Sbjct: 119 -------DWKPI---------PPGPDNPLGTHAMYLGWPAYI-IHGTHDTRKIG---RRS 158

Query: 340 TSGCVRVRNIIDLDVW 355
           + GC+ + N   +   
Sbjct: 159 SDGCIGLYN-EKIAEL 173


>gi|21230048|ref|NP_635965.1| hypothetical protein XCC0573 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769959|ref|YP_244721.1| hypothetical protein XC_3660 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111570|gb|AAM39889.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575291|gb|AAY50701.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 308

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V +L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 105 TSGLLREKAHGAEVLKLQQTLQQLGYKDAKGNELNADGAYGQRTGEAVKAFQRAHGLQED 164

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   TL+A+       +   + N
Sbjct: 165 GVVGGDTLKALKQAEKTPLLSEKTN 189


>gi|312200483|ref|YP_004020544.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311231819|gb|ADP84674.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 226

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 3/57 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V++L+ +L   G    +  +   F    +  V+ +Q  HGL   G+V   T +A+
Sbjct: 171 DAVRQLQTKLSGLGY---TIAVDGYFGPQTDGVVRAYQGSHGLPADGVVGPQTHQAL 224


>gi|302390075|ref|YP_003825896.1| carboxyl-terminal protease [Thermosediminibacter oceani DSM 16646]
 gi|302200703|gb|ADL08273.1| carboxyl-terminal protease [Thermosediminibacter oceani DSM 16646]
          Length = 473

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    RPL  G   + V  L++ L   G    +      F+   + AV+ FQ + G   +
Sbjct: 370 PLKSTRPLKYGCIGLDVMGLQQHLRFLGLF--NGEPDGVFEQRTKKAVEDFQAKKGFPVN 427

Query: 155 GMVDSSTLEAMNVPVDLRIR-----QLQVNLMRIKKLLEQ 189
           G+ D   LEA++  V+  ++     QL+  L  +K LL +
Sbjct: 428 GIADEKLLEALDGAVNEALKSREDLQLKKALEVLKGLLTE 467


>gi|296330698|ref|ZP_06873175.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673955|ref|YP_003865627.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSZ protein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152162|gb|EFG93034.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305412199|gb|ADM37318.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSZ protein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 317

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          +V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTKGTNVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   G+    T   + 
Sbjct: 297 SGLTADGIYGPKTKAKIE 314


>gi|259046708|ref|ZP_05737109.1| carboxy-terminal processing peptidase [Granulicatella adiacens ATCC
           49175]
 gi|259036604|gb|EEW37859.1| carboxy-terminal processing peptidase [Granulicatella adiacens ATCC
           49175]
          Length = 497

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+ S +V+ +   L   G           FD+    AVK FQ   G+  +G V+  T 
Sbjct: 415 KEGSVSDNVKTIETILKGLGY---DVKADGYFDSKTTEAVKQFQKSKGISETGEVNEQTG 471

Query: 163 EAM 165
            A+
Sbjct: 472 SAL 474


>gi|37678756|ref|NP_933365.1| putative general secretion pathway protein A [Vibrio vulnificus
           YJ016]
 gi|37197497|dbj|BAC93336.1| putative general secretion pathway protein A [Vibrio vulnificus
           YJ016]
          Length = 718

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 10/110 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP      L LG    ++  L + L  +  L+     +  F+A +   V+ FQ    +  
Sbjct: 456 WPMPLRETLRLGMHGEAIAVLDQLLAKA--LNDEPLKTTQFNAELMQRVEWFQRWQAMTE 513

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
            G+    TL         R++ +       +   + +       +  P  
Sbjct: 514 DGIAGQRTLA--------RLQHMVSLSEPWRDFTKAEKQGEEQAMRYPEF 555


>gi|302336335|ref|YP_003801542.1| Peptidoglycan-binding domain 1 protein [Olsenella uli DSM 7084]
 gi|301320175|gb|ADK68662.1| Peptidoglycan-binding domain 1 protein [Olsenella uli DSM 7084]
          Length = 303

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 44/149 (29%), Gaps = 14/149 (9%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDI 88
            PI        + +    +    ++   A +     S  P                    
Sbjct: 2   DPIREGASGAAVEDIQERLGRLGYEIDEAELAE--KSMGPSSVAAVAKFRLDQGMGLGTE 59

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +    W  L      +G+              V +++ERL I G           F  Y 
Sbjct: 60  VDAPTWSALVDAGYTMGDRTLYLRLPNFHGNDVLQMQERLNILGF--SCGKPDGCFGVYT 117

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+AVK FQ   G+   GM    T ++++ 
Sbjct: 118 EAAVKEFQESQGMLADGMAFQDTFDSIDR 146


>gi|238063101|ref|ZP_04607810.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
           39149]
 gi|237884912|gb|EEP73740.1| Muramoyl-pentapeptide carboxypeptidase [Micromonospora sp. ATCC
           39149]
          Length = 242

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R L+ G S   V++L+ R+               +     +AV+ FQ  +GL   G+  
Sbjct: 19  TRDLYEGRSGEDVRQLQIRVAGWAGRRDIVETDGNYGPKTAAAVRRFQSAYGLPADGIAG 78

Query: 159 SSTLEAM 165
             T   +
Sbjct: 79  PQTYTKL 85


>gi|229165690|ref|ZP_04293458.1| hypothetical protein bcere0007_6670 [Bacillus cereus AH621]
 gi|228617691|gb|EEK74748.1| hypothetical protein bcere0007_6670 [Bacillus cereus AH621]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVDW---NSPEPPNFIFRQDPG--KINAMASTKI 313
             + +D N      +   + +    E  D+      +   +  ++ PG    N + +  +
Sbjct: 35  LSFFEDGNYTRTFPITTGRDRTPTPEG-DFCIITKYKNKEYHRKKIPGGAPNNPLGTRWL 93

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +    +H T       +     ++GC+R+ +
Sbjct: 94  GLDKKE-YAIHGTNREGTIGSRE---SNGCIRMHD 124


>gi|197303250|ref|ZP_03168291.1| hypothetical protein RUMLAC_01973 [Ruminococcus lactaris ATCC
           29176]
 gi|197297676|gb|EDY32235.1| hypothetical protein RUMLAC_01973 [Ruminococcus lactaris ATCC
           29176]
          Length = 421

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V +++E+L +  +  P+         +      AV+ FQ   GL  +
Sbjct: 337 PGYTLEQGASGEKVLQMQEQLRVISEAYPAIPKVEADGIYGPATAQAVEKFQSVFGLPVT 396

Query: 155 GMVDSSTLEAMN 166
           G VD ST   ++
Sbjct: 397 GTVDYSTWYKIS 408


>gi|257082442|ref|ZP_05576803.1| carboxyl-terminal protease [Enterococcus faecalis E1Sol]
 gi|256990472|gb|EEU77774.1| carboxyl-terminal protease [Enterococcus faecalis E1Sol]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPITGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|229199180|ref|ZP_04325861.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus m1293]
 gi|228584286|gb|EEK42423.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus m1293]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|218674467|ref|ZP_03524136.1| hypothetical protein RetlG_24852 [Rhizobium etli GR56]
          Length = 212

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 47/187 (25%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 69  LYVIMENKTAIRYGVGVGREGFK-WFGRATIDAKSLWPRWTPPPEMRKRH---------- 117

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 118 ----------------------------PELPEFVAGGSPKNPLGPRAMYLHRDGVDTGY 149

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
             H T EP          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +
Sbjct: 150 RFHGTLEPWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIADQAESTTQ 204

Query: 382 LATEVPV 388
           ++   PV
Sbjct: 205 VSQTTPV 211


>gi|30249163|ref|NP_841233.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           europaea ATCC 19718]
 gi|30180482|emb|CAD85087.1| Putative peptidoglycan binding domain 1 [Nitrosomonas europaea ATCC
           19718]
          Length = 262

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 74  TIAQTEKAIAFYQDI---LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            + + +  +A  + +      GG   +    LH G+    V  L+E LI  G    S  +
Sbjct: 173 YLIKAKSELARIEGLVISADEGGNTMI----LHRGSFGAGVAELQELLINKGF---SLSI 225

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +F A  E AV  FQ  + L+ +G+V+ +T   +  
Sbjct: 226 DSSFGAATELAVMTFQKANSLEANGIVERNTWTRLRA 262


>gi|163942750|ref|YP_001647634.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
 gi|163864947|gb|ABY46006.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGK---ATTLGCIRMFNND--IHWLFER 143


>gi|170756455|ref|YP_001780389.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
           Okra]
 gi|169121667|gb|ACA45503.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum B1 str.
           Okra]
          Length = 234

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L     +   +V+ ++ +L   G      G++  F      A+K FQ    L   G
Sbjct: 162 PGYLLKYNPNSFDANVKAIQNKLQNIGYSVGKSGVNGYFGDGTLLAIKCFQRDCNLMIDG 221

Query: 156 MVDSSTLEAM 165
           ++  +T   +
Sbjct: 222 VIGVNTWNRI 231


>gi|116492825|ref|YP_804560.1| periplasmic protease [Pediococcus pentosaceus ATCC 25745]
 gi|116102975|gb|ABJ68118.1| Periplasmic protease [Pediococcus pentosaceus ATCC 25745]
          Length = 472

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G S+  ++ ++  L   G  D    +S  +   V+ AV+ +Q ++ L  +G VD
Sbjct: 382 KKTYSVGESNSDIKNIQIALKGLGYYD--DKISKEYTEKVKQAVEAYQEKNQLAVTGKVD 439

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           + T+ ++   V   + +    L + +K++  + 
Sbjct: 440 AKTMRSIEQNVIKTLAKNDPALEKAQKVMNDEK 472


>gi|313897792|ref|ZP_07831333.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
 gi|312957327|gb|EFR38954.1| peptidoglycan binding domain protein [Clostridium sp. HGF2]
          Length = 169

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +    L  G+  + V + +  L +    G ++        +    E AV+ +Q    L 
Sbjct: 2   MISTAALKPGSIGIGVNKQQAYLNMMQEKGFINTRNLQDGVYGTRTEQAVREWQRYANLP 61

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
             G + + T +++     LR  Q+  N+
Sbjct: 62  IDGEIGNDTWDSIV--NKLRDLQIVTNI 87



 Score = 44.3 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G   +SV +++E L              +   +     + V+ FQ  + L+  G++ 
Sbjct: 96  LSSGAQGISVFKMQEYLNEIAAVNKCLRPIPVDGMYGPRTTTMVQQFQYLYDLNIDGVIG 155

Query: 159 SSTLEAM 165
            +T +A+
Sbjct: 156 KATWDAI 162


>gi|304438000|ref|ZP_07397944.1| LysM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368954|gb|EFM22635.1| LysM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 256

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 50/173 (28%), Gaps = 21/173 (12%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI  G L  +             A++  Q  H L   G+   +T 
Sbjct: 79  KEGMRGGAVKHVQELLIQGGYLAGAA--DGIAGPMTREAIERCQAAHQLTVDGICGEATY 136

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A++   D     L +   R     +   G    +     A   A + G           
Sbjct: 137 HALSGGADYDPAALGIVEER---PPQVSRGGGRSVYVSATAY-SAYDPG----------- 181

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRS--IIQKDMMALLRQDPQYLKDNNIHM 273
                T       + ++     VIP    +        + +D  Y   N   +
Sbjct: 182 -NGSHTATGTLVRHGVIAVDPSVIPLGTHVFIPGYGEAVAEDIGYAI-NGYRI 232


>gi|114706955|ref|ZP_01439854.1| hypothetical protein FP2506_02849 [Fulvimarina pelagi HTCC2506]
 gi|114537505|gb|EAU40630.1| hypothetical protein FP2506_02849 [Fulvimarina pelagi HTCC2506]
          Length = 269

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +++  G P+  +  +    +   +  L++ L  +G       +   F     +A++ FQ 
Sbjct: 72  LIATRGMPQPSLNTVEATKADPLLAELQQALAETGHYTR--AIDGRFGPGTRAAIERFQH 129

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
            +GL   G   ++ L  + V
Sbjct: 130 ENGLSVDGRPSTALLRQVKV 149


>gi|111222214|ref|YP_713008.1| putative N-acetylmuramoyl-L-alanine amidase [Frankia alni ACN14a]
 gi|111149746|emb|CAJ61438.1| putative N-acetylmuramoyl-L-alanine amidase precursor (Cell wall
           hydrolase) (Autolysin) [Frankia alni ACN14a]
          Length = 124

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 24/52 (46%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            + G  D    +  A+     +AV+ FQ RHGL P G V   T   + VPV 
Sbjct: 3   YLLGAHDLRVPVDGAYGPRTVTAVREFQTRHGLTPDGQVGQRTWPVLIVPVR 54


>gi|303246139|ref|ZP_07332420.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
 gi|302492535|gb|EFL52406.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
          Length = 579

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              +V  L++ L   G       +  AF     +AV  FQ+  G++  G+V  +T  A+ 
Sbjct: 183 KGAAVVALQKAL--LGQGLDPGPIDGAFGPMTHAAVLSFQLMRGIEVDGVVGPATARALG 240

Query: 167 VP 168
           +P
Sbjct: 241 LP 242


>gi|329571926|gb|EGG53604.1| peptidase, S41 family [Enterococcus faecalis TX1467]
          Length = 484

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|315162340|gb|EFU06357.1| peptidase [Enterococcus faecalis TX0645]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|326779611|ref|ZP_08238876.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326659944|gb|EGE44790.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 399

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPS--GM 156
             L  G+    V  L+ RL   G+   S  +   ++   V  +V ++Q    +     G+
Sbjct: 318 SSLRPGDRGPEVAELQTRLRTVGEWLYSGPVDGSSYSDQVAHSVAIYQSYKAIQGDPIGV 377

Query: 157 VDSSTLEAMNV 167
              +T  A+  
Sbjct: 378 YGPNTRRALEQ 388


>gi|295113069|emb|CBL31706.1| C-terminal peptidase (prc) [Enterococcus sp. 7L76]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|294781608|ref|ZP_06746944.1| peptidase, S41 family [Enterococcus faecalis PC1.1]
 gi|294451304|gb|EFG19770.1| peptidase, S41 family [Enterococcus faecalis PC1.1]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|257419406|ref|ZP_05596400.1| predicted protein [Enterococcus faecalis T11]
 gi|257161234|gb|EEU91194.1| predicted protein [Enterococcus faecalis T11]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|257416201|ref|ZP_05593195.1| carboxyl-terminal protease [Enterococcus faecalis AR01/DG]
 gi|257158029|gb|EEU87989.1| carboxyl-terminal protease [Enterococcus faecalis ARO1/DG]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|257086967|ref|ZP_05581328.1| carboxyl-terminal protease [Enterococcus faecalis D6]
 gi|256994997|gb|EEU82299.1| carboxyl-terminal protease [Enterococcus faecalis D6]
 gi|315027837|gb|EFT39769.1| peptidase [Enterococcus faecalis TX2137]
 gi|315172408|gb|EFU16425.1| peptidase [Enterococcus faecalis TX1346]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|257085074|ref|ZP_05579435.1| carboxyl-terminal protease [Enterococcus faecalis Fly1]
 gi|256993104|gb|EEU80406.1| carboxyl-terminal protease [Enterococcus faecalis Fly1]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|256959090|ref|ZP_05563261.1| carboxyl-terminal protease [Enterococcus faecalis DS5]
 gi|257079121|ref|ZP_05573482.1| carboxyl-terminal protease [Enterococcus faecalis JH1]
 gi|307269492|ref|ZP_07550831.1| peptidase [Enterococcus faecalis TX4248]
 gi|256949586|gb|EEU66218.1| carboxyl-terminal protease [Enterococcus faecalis DS5]
 gi|256987151|gb|EEU74453.1| carboxyl-terminal protease [Enterococcus faecalis JH1]
 gi|306514112|gb|EFM82688.1| peptidase [Enterococcus faecalis TX4248]
 gi|315037093|gb|EFT49025.1| peptidase [Enterococcus faecalis TX0027]
 gi|315147375|gb|EFT91391.1| peptidase [Enterococcus faecalis TX4244]
 gi|327535245|gb|AEA94079.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           OG1RF]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|256762610|ref|ZP_05503190.1| carboxyl-terminal protease [Enterococcus faecalis T3]
 gi|257422502|ref|ZP_05599492.1| carboxyl-terminal protease [Enterococcus faecalis X98]
 gi|256683861|gb|EEU23556.1| carboxyl-terminal protease [Enterococcus faecalis T3]
 gi|257164326|gb|EEU94286.1| carboxyl-terminal protease [Enterococcus faecalis X98]
 gi|315156169|gb|EFU00186.1| peptidase [Enterococcus faecalis TX0043]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|255972683|ref|ZP_05423269.1| predicted protein [Enterococcus faecalis T1]
 gi|255963701|gb|EET96177.1| predicted protein [Enterococcus faecalis T1]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|229549899|ref|ZP_04438624.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis ATCC
           29200]
 gi|256961817|ref|ZP_05565988.1| carboxyl-terminal protease [Enterococcus faecalis Merz96]
 gi|293389633|ref|ZP_06634088.1| carboxyl- protease [Enterococcus faecalis S613]
 gi|307289219|ref|ZP_07569175.1| peptidase [Enterococcus faecalis TX0109]
 gi|312907649|ref|ZP_07766640.1| peptidase [Enterococcus faecalis DAPTO 512]
 gi|312910266|ref|ZP_07769113.1| C-terminal processing peptidase [Enterococcus faecalis DAPTO 516]
 gi|312951611|ref|ZP_07770506.1| peptidase [Enterococcus faecalis TX0102]
 gi|229304972|gb|EEN70968.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis ATCC
           29200]
 gi|256952313|gb|EEU68945.1| carboxyl-terminal protease [Enterococcus faecalis Merz96]
 gi|291081026|gb|EFE17989.1| carboxyl- protease [Enterococcus faecalis S613]
 gi|306499928|gb|EFM69289.1| peptidase [Enterococcus faecalis TX0109]
 gi|310626677|gb|EFQ09960.1| peptidase [Enterococcus faecalis DAPTO 512]
 gi|310630328|gb|EFQ13611.1| peptidase [Enterococcus faecalis TX0102]
 gi|311289539|gb|EFQ68095.1| C-terminal processing peptidase [Enterococcus faecalis DAPTO 516]
 gi|315152368|gb|EFT96384.1| peptidase [Enterococcus faecalis TX0031]
 gi|315158189|gb|EFU02206.1| peptidase [Enterococcus faecalis TX0312]
 gi|315164128|gb|EFU08145.1| peptidase [Enterococcus faecalis TX1302]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|227518870|ref|ZP_03948919.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX0104]
 gi|227073661|gb|EEI11624.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX0104]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|29376233|ref|NP_815387.1| carboxyl-terminal protease [Enterococcus faecalis V583]
 gi|293382880|ref|ZP_06628798.1| carboxyl- protease [Enterococcus faecalis R712]
 gi|29343696|gb|AAO81457.1| carboxyl-terminal protease [Enterococcus faecalis V583]
 gi|291079545|gb|EFE16909.1| carboxyl- protease [Enterococcus faecalis R712]
 gi|315576110|gb|EFU88301.1| peptidase [Enterococcus faecalis TX0309B]
 gi|315580684|gb|EFU92875.1| peptidase [Enterococcus faecalis TX0309A]
 gi|323480840|gb|ADX80279.1| carboxy-terminal processing proteinase [Enterococcus faecalis 62]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|218510142|ref|ZP_03508020.1| hypothetical protein RetlB5_23325 [Rhizobium etli Brasil 5]
          Length = 76

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
           + P        G  N + +  I         +H T +P          +SGC R+   ++
Sbjct: 4   KNPRLPAVVKAGPANPLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYREDV 59

Query: 350 IDLDVWLLKDT 360
            +L   +   T
Sbjct: 60  EELYDMVQPGT 70


>gi|30682566|ref|NP_193103.2| PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5); heat shock protein
           binding / unfolded protein binding [Arabidopsis
           thaliana]
 gi|119360137|gb|ABL66797.1| At4g13670 [Arabidopsis thaliana]
 gi|332657911|gb|AEE83311.1| protein plastid transcriptionally active 5 [Arabidopsis thaliana]
          Length = 387

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L +G+    VQ L+E L+  G     + +   +F +   SAVK +Q   G+   G++ + 
Sbjct: 178 LKVGSEGDDVQALQEALLKLGFYSGEEDMEFSSFSSGTASAVKTWQASLGVREDGVMTAE 237

Query: 161 TLEAM 165
            L+ +
Sbjct: 238 LLQRL 242


>gi|309776324|ref|ZP_07671312.1| N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308915920|gb|EFP61672.1| N-acetylmuramoyl-L-alanine amidase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 226

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y       G+P      L  G+  V V  L++ L   G    ++ L   F     SA+
Sbjct: 135 KRYGTPACSAGFP-----VLRNGSRGVYVLILQDALNALGY--STRTLDGVFGNNTRSAL 187

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             +Q  +GL   G+    T   +
Sbjct: 188 VAYQRENGLSADGVAGCGTWTRI 210


>gi|229089816|ref|ZP_04221071.1| hypothetical protein bcere0021_6540 [Bacillus cereus Rock3-42]
 gi|228693441|gb|EEL47147.1| hypothetical protein bcere0021_6540 [Bacillus cereus Rock3-42]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   + +    E         +   +  ++  G    N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|217962509|ref|YP_002341081.1| hypothetical protein BCAH187_A5187 [Bacillus cereus AH187]
 gi|222098484|ref|YP_002532542.1| protein erfk/srfk precursor [Bacillus cereus Q1]
 gi|229142355|ref|ZP_04270874.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST26]
 gi|217063683|gb|ACJ77933.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|221242543|gb|ACM15253.1| protein erfK/srfK precursor [Bacillus cereus Q1]
 gi|228641125|gb|EEK97437.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST26]
          Length = 153

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 38/169 (22%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T               GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWTTL---GCIRMYNND--IHWLFERIP 145


>gi|281357197|ref|ZP_06243686.1| Peptidoglycan-binding domain 1 protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281316228|gb|EFB00253.1| Peptidoglycan-binding domain 1 protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 308

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 13/99 (13%)

Query: 95  PELPIRP-------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVA--FDAYVESAVKLF 145
           P +P +        +  G S   V  L   L++   L           +D  +E +VK F
Sbjct: 117 PVVPAKTYEYGERTIRSGMSGSDVATLATFLVLHKYLTMDVKPGKRVFYDWRIEESVKKF 176

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           Q    L  +G+ D+ T + +          L     + +
Sbjct: 177 QRDANLPETGICDAQTAKKL----KEWEAILAERKEKER 211



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 15/92 (16%)

Query: 79  EKAIAFYQD-ILSRGGWPELPIRPLHLGNSSVSV----------QRLRERLIISGDLDPS 127
           ++ +A YQ+ I      P +P +   LG   + +            L +RL +       
Sbjct: 209 KERLAGYQEKITPITPIPVIPSKTFKLGMRDLRIGCTGEDVTDFISLLQRLNLLDY---- 264

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
                 FD  VE+AVK +Q + G   +G+ D 
Sbjct: 265 SESMDFFDTKVEAAVKKYQKQTGRTETGVADK 296


>gi|16078311|ref|NP_389128.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309095|ref|ZP_03590942.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313422|ref|ZP_03595227.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318345|ref|ZP_03599639.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322618|ref|ZP_03603912.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314988|ref|YP_004207275.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis BSn5]
 gi|45477245|sp|O34391|XLYB_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase XlyB; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|2633600|emb|CAB13103.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|2645866|gb|AAB87514.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320021262|gb|ADV96248.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus subtilis BSn5]
          Length = 317

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +           V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTQGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   G+    T   M 
Sbjct: 297 SGLTADGIYGPKTKAKME 314


>gi|325123319|gb|ADY82842.1| hypothetical protein BDGL_002256 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 167

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVAEDALVYLSEQ 164


>gi|224476551|ref|YP_002634157.1| putative protease [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222421158|emb|CAL27972.1| putative protease [Staphylococcus carnosus subsp. carnosus TM300]
          Length = 489

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 9/94 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPS 127
           I  K      + A   YQ +        +P    L  G+++ +V+ ++  L   G    +
Sbjct: 377 IHGKGIQPDVKIAAPKYQSL------SMIPDDKILKEGDNNKNVKSIKIGLKALGY--DT 428

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              +  FD  ++SA++ FQ  + L+ +G  D  T
Sbjct: 429 GEENNDFDGTLKSAIESFQKDNQLEVNGTFDKET 462


>gi|113952854|ref|YP_730932.1| ATP synthase [Synechococcus sp. CC9311]
 gi|113880205|gb|ABI45163.1| ATP synthase [Synechococcus sp. CC9311]
          Length = 197

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 52/160 (32%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
              + + +++    L+ +++G V  R  V +G  +  TP     I R+            
Sbjct: 67  RAEKTIEISLKDRYLKLLDSGVVVARYPVAIGAPESPTPAGSYEITRM------------ 114

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
              +                  +  +KGK +                    PG  N +  
Sbjct: 115 ---EDAP---------------VYHKKGKVI-------------------APGPKNPVGV 137

Query: 311 TKI-EFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             +  F   +  Y +H T  P   N      + GC+R+ N
Sbjct: 138 RYMAYFQLGSGEYAIHGTAWPNWVNLRA-AVSLGCIRMLN 176


>gi|328554309|gb|AEB24801.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens
           TA208]
 gi|328912705|gb|AEB64301.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens LL3]
          Length = 250

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +           V +++  L  +         + G+   +     +AVK FQ  
Sbjct: 169 PLPSGIIKLTTPYTKGEKVTQVQRALAAAYFYPDKHAKNHGIDGIYGPKTANAVKRFQTM 228

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+    T + +  
Sbjct: 229 NGLQADGIYGPKTKDKLEA 247


>gi|315168921|gb|EFU12938.1| peptidase [Enterococcus faecalis TX1341]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|312899528|ref|ZP_07758858.1| peptidase [Enterococcus faecalis TX0470]
 gi|311293398|gb|EFQ71954.1| peptidase [Enterococcus faecalis TX0470]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|312903429|ref|ZP_07762609.1| peptidase [Enterococcus faecalis TX0635]
 gi|310633305|gb|EFQ16588.1| peptidase [Enterococcus faecalis TX0635]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|307277953|ref|ZP_07559037.1| peptidase [Enterococcus faecalis TX0860]
 gi|306505350|gb|EFM74536.1| peptidase [Enterococcus faecalis TX0860]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|257089995|ref|ZP_05584356.1| predicted protein [Enterococcus faecalis CH188]
 gi|256998807|gb|EEU85327.1| predicted protein [Enterococcus faecalis CH188]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|256853236|ref|ZP_05558606.1| carboxyl-terminal protease [Enterococcus faecalis T8]
 gi|256711695|gb|EEU26733.1| carboxyl-terminal protease [Enterococcus faecalis T8]
 gi|315029270|gb|EFT41202.1| peptidase [Enterococcus faecalis TX4000]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|256619174|ref|ZP_05476020.1| carboxyl-terminal protease [Enterococcus faecalis ATCC 4200]
 gi|256598701|gb|EEU17877.1| carboxyl-terminal protease [Enterococcus faecalis ATCC 4200]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|255975735|ref|ZP_05426321.1| carboxyl-terminal protease [Enterococcus faecalis T2]
 gi|255968607|gb|EET99229.1| carboxyl-terminal protease [Enterococcus faecalis T2]
          Length = 480

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|300860306|ref|ZP_07106393.1| peptidase, S41 family [Enterococcus faecalis TUSoD Ef11]
 gi|307275859|ref|ZP_07556998.1| peptidase [Enterococcus faecalis TX2134]
 gi|300849345|gb|EFK77095.1| peptidase, S41 family [Enterococcus faecalis TUSoD Ef11]
 gi|306507551|gb|EFM76682.1| peptidase [Enterococcus faecalis TX2134]
 gi|315031956|gb|EFT43888.1| peptidase [Enterococcus faecalis TX0017]
 gi|315577763|gb|EFU89954.1| peptidase [Enterococcus faecalis TX0630]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|229545708|ref|ZP_04434433.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX1322]
 gi|307291882|ref|ZP_07571753.1| peptidase [Enterococcus faecalis TX0411]
 gi|229309158|gb|EEN75145.1| S41A family carboxy-terminal peptidase [Enterococcus faecalis
           TX1322]
 gi|306497148|gb|EFM66694.1| peptidase [Enterococcus faecalis TX0411]
          Length = 477

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PIDENNANYTAETKAAVSDLQQKNGLPVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|27382340|ref|NP_773869.1| hypothetical protein bll7229 [Bradyrhizobium japonicum USDA 110]
 gi|27355511|dbj|BAC52494.1| bll7229 [Bradyrhizobium japonicum USDA 110]
          Length = 301

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 12/97 (12%)

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF-RQD-------PGKINAMAST 311
           RQ  +Y            G++    + +W    PP  +  RQ         G  N + + 
Sbjct: 142 RQAMRYGIGVGREGFAWSGEQTVARKAEWPDWHPPAEMVSRQPYLPRFMAGGPGNPLGAR 201

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +         +H T +P          +SGC+R+ N
Sbjct: 202 AMYLGETE-YRIHGTNKPDTIGKR---VSSGCIRLTN 234


>gi|323136242|ref|ZP_08071324.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322398316|gb|EFY00836.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 231

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 15/104 (14%)

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP--------GKINA 307
           +   +    Y           KG+     +  W    PP  + ++ P        G+ N 
Sbjct: 113 LPNGQAVR-YGIGVGREGFTWKGRVRIGRKESWPDWTPPKEMLKRRPDLPRHMAGGEDNP 171

Query: 308 MASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           + +  +     +R+  + +H + EP          +SGC+R+ N
Sbjct: 172 LGARAMYLYSGNRDTMFRIHGSNEPWTIGQ---AVSSGCIRMTN 212


>gi|254454510|ref|ZP_05067947.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
 gi|198268916|gb|EDY93186.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
          Length = 183

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 45/159 (28%), Gaps = 43/159 (27%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
            +G   +L +I + +L               V   +  T   +S+I R    P W   +S
Sbjct: 49  TLGNGAILADITSRALHYWGADGSYRLYPSSVPMSEDLTRRGYSQIVRKRVGPTWTPTQS 108

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
           + ++D                                       P+     D G  N + 
Sbjct: 109 MRERD---------------------------------------PSLPVMMDAGPGNPLG 129

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +  +         +H T +        R  +SGC+ + N
Sbjct: 130 THAMYLDWP-AYLIHGTHDTRKIG---RQSSSGCIGLYN 164


>gi|329731573|gb|EGG67935.1| peptidase, S41 family [Staphylococcus epidermidis VCU144]
          Length = 490

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 404 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 461

Query: 160 ST 161
            T
Sbjct: 462 KT 463


>gi|251810854|ref|ZP_04825327.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876140|ref|ZP_06285007.1| C-terminal processing peptidase [Staphylococcus epidermidis SK135]
 gi|251805534|gb|EES58191.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281295165|gb|EFA87692.1| C-terminal processing peptidase [Staphylococcus epidermidis SK135]
 gi|329737198|gb|EGG73452.1| peptidase, S41 family [Staphylococcus epidermidis VCU028]
          Length = 491

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|57866912|ref|YP_188573.1| carboxyl-terminal protease [Staphylococcus epidermidis RP62A]
 gi|81674603|sp|Q5HPB7|CTPAL_STAEQ RecName: Full=Probable CtpA-like serine protease
 gi|57637570|gb|AAW54358.1| carboxyl-terminal protease [Staphylococcus epidermidis RP62A]
          Length = 491

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|27468031|ref|NP_764668.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           ATCC 12228]
 gi|293366606|ref|ZP_06613283.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|81843763|sp|Q8CSK8|CTPAL_STAES RecName: Full=Probable CtpA-like serine protease
 gi|27315576|gb|AAO04710.1|AE016747_207 carboxy-terminal processing protease [Staphylococcus epidermidis
           ATCC 12228]
 gi|291319375|gb|EFE59744.1| carboxy-terminal processing protease [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329735325|gb|EGG71617.1| peptidase, S41 family [Staphylococcus epidermidis VCU045]
          Length = 491

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G   P    +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--PIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|312136042|ref|YP_004003380.1| carboxyl-terminal protease [Caldicellulosiruptor owensensis OL]
 gi|311776093|gb|ADQ05580.1| carboxyl-terminal protease [Caldicellulosiruptor owensensis OL]
          Length = 472

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + +   ++RL   G L          D     AV+ FQ  + L PSG++
Sbjct: 380 ATKKFKKGDMDLEILAAQQRLFYLGYLSSWTA---KMDDNTVVAVQKFQKDNKLYPSGIL 436

Query: 158 DSSTLEAMNVPVDL 171
           D +T + +N     
Sbjct: 437 DITTQKKLNEKFTD 450


>gi|327194359|gb|EGE61219.1| hypothetical protein RHECNPAF_12210033 [Rhizobium etli CNPAF512]
          Length = 224

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 56/195 (28%), Gaps = 19/195 (9%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQT---------PILHSRINRIMFNPYWVIPRSIIQKDMM 256
            AV+NG     +                    PI    ++      Y ++      +  +
Sbjct: 36  TAVDNGVTYRSTNFAKIDKKWHRQVVKYFSSEPIGTVVVDTRHHFLYVIMENKTAIRYGV 95

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
            + R+  ++     I       +       +     P    F       N +    +  +
Sbjct: 96  GVGREGFKWFGRATIDAKSLWPRWTPPP--EMRKRHPELPEFVDGGSPKNPLGPRAMYLH 153

Query: 317 SRN---NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
                     H T EP          +SGC+R+ N   +D  L +  P  +   +   + 
Sbjct: 154 RDGVDTGYRFHGTLEPWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIA 208

Query: 374 TRKTTPVKLATEVPV 388
            +  +  +++   PV
Sbjct: 209 DQAESTTQVSQTTPV 223


>gi|296329447|ref|ZP_06871934.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305674771|ref|YP_003866443.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296153329|gb|EFG94191.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413015|gb|ADM38134.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 466

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+S  +V+  ++ L   G       ++  +D    S VK FQ +  L  +G++
Sbjct: 376 ADKTYKSGDSGTNVKVAQKMLKALGY---KVKVNSTYDQDFVSVVKQFQKKEKLKETGVL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T   +   +  ++      + +
Sbjct: 433 TGDTTTKLMTELQKKLSNNDTQMEK 457


>gi|293611001|ref|ZP_06693300.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826653|gb|EFF85019.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 167

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVAEDALVYLSEQ 164


>gi|15807153|ref|NP_295882.1| hypothetical protein DR_2159 [Deinococcus radiodurans R1]
 gi|6459963|gb|AAF11713.1|AE002049_18 hypothetical protein DR_2159 [Deinococcus radiodurans R1]
          Length = 255

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 5/81 (6%)

Query: 96  ELPI--RPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            +P   R L       +   V++L+ RL+    +DP KG    F    E+ V +FQ+ +G
Sbjct: 160 AVPAFKRSLRLTTPRMNGADVKQLQLRLMDRSHVDPGKGGDGWFGPVTEANVIVFQLANG 219

Query: 151 LDPSGMVDSSTLEAMNVPVDL 171
           L P+G+VD +T   +  P   
Sbjct: 220 LKPTGVVDRATWTTLFSPGAK 240


>gi|220925063|ref|YP_002500365.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219949670|gb|ACL60062.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 168

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 47/169 (27%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V      L  V      +R  + VG++ +Q     + I      P W  P  + +   
Sbjct: 39  IVVRTGERRLYFVNGDGTAIRYPIAVGKLGKQ-WTGLAHIEGKYVQPAWAPPAEVKR--- 94

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIE 314
                                               + P        G   N M +  + 
Sbjct: 95  ------------------------------------DNPRLPRIIAGGSPHNPMGAAALT 118

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                   +H T  P        F + GC+R+  ++++DL   +   TP
Sbjct: 119 LDRGE-YAIHGTNRPSSIGT---FASYGCIRMYNQDVVDLYSRVEVGTP 163


>gi|154685680|ref|YP_001420841.1| XlyB [Bacillus amyloliquefaciens FZB42]
 gi|154351531|gb|ABS73610.1| XlyB [Bacillus amyloliquefaciens FZB42]
          Length = 317

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          +V++++  L            + G    +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTKPLTKGTNVKQVQNALSALYFYPDKGAKNHGADGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   G+    T   + 
Sbjct: 297 SGLTADGIYGPKTKAKIE 314


>gi|222529956|ref|YP_002573838.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456803|gb|ACM61065.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 223

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R ++ G++ V V  ++ RL   G       +   +   +E A+ LFQ ++ L  +  +  
Sbjct: 154 RTIYPGDTGVDVMAVQRRLKELGIY--YGDIDGKYGPTLEYAINLFQKKNKLPVTNKITP 211

Query: 160 STLEAMN 166
             L  M 
Sbjct: 212 YLLRKMG 218



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 37/137 (27%), Gaps = 16/137 (11%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+  N I         GK      +        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKNGILYKSYPVSPGKPSTPTPIGTFKIVSKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
                    +H T             + GC+R+  +++ +L +++   T       I   
Sbjct: 92  LNVPYGKYGIHGTIYESYIGA---HVSKGCIRMLNKDVKELFLYIPIGTTVVISEGIYGE 148

Query: 372 VKTRKTTPVKLATEVPV 388
            +    T     T V V
Sbjct: 149 FRNGFRTIYPGDTGVDV 165



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%)

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
           + + L+ I  +         + V+I  + L   +NG +     V  G+    TPI   +I
Sbjct: 16  ILMPLITISGISNHNKNPYLIYVSIDDSRLYVFKNGILYKSYPVSPGKPSTPTPIGTFKI 75

Query: 236 NRI 238
              
Sbjct: 76  VSK 78


>gi|302849927|ref|XP_002956492.1| hypothetical protein VOLCADRAFT_121539 [Volvox carteri f.
           nagariensis]
 gi|300258190|gb|EFJ42429.1| hypothetical protein VOLCADRAFT_121539 [Volvox carteri f.
           nagariensis]
          Length = 655

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 6/72 (8%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            +P   L  G     V +L+  L   G       +   F    E+AVK FQ  + L   G
Sbjct: 351 AVPESGLEAG----EVMQLQRYLHKYGWY--GGEVDGYFGPATEAAVKRFQEFYHLKVDG 404

Query: 156 MVDSSTLEAMNV 167
           +   +T   M +
Sbjct: 405 IAGPATRSLMMM 416


>gi|153815857|ref|ZP_01968525.1| hypothetical protein RUMTOR_02102 [Ruminococcus torques ATCC 27756]
 gi|145846882|gb|EDK23800.1| hypothetical protein RUMTOR_02102 [Ruminococcus torques ATCC 27756]
          Length = 101

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G             + +    +V+ FQ    L  +
Sbjct: 17  PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 76

Query: 155 GMVDSSTLEAMN 166
           G VD ST   ++
Sbjct: 77  GKVDYSTWYKIS 88


>gi|313623229|gb|EFR93479.1| carboxypeptidase family protein [Listeria innocua FSL J1-023]
          Length = 468

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 380 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDIDTEYAVQRFQAANNLDVTGIM 437

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 438 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 468


>gi|302553494|ref|ZP_07305836.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302471112|gb|EFL34205.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GN+   V  ++ +L   G  +P   +          AV  FQ  HGL   G+V   T +A
Sbjct: 56  GNAGPCVADVQSKLNQLG-ANPQLDVDGIAGRQTYQAVITFQRSHGLTADGVVGPLTKQA 114

Query: 165 MN 166
           ++
Sbjct: 115 IS 116


>gi|298492145|ref|YP_003722322.1| cell wall hydrolase/autolysin ['Nostoc azollae' 0708]
 gi|298234063|gb|ADI65199.1| cell wall hydrolase/autolysin ['Nostoc azollae' 0708]
          Length = 313

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 96  ELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           ++  + L  GN  S   ++ L+ R                +    E+A+K FQ ++GL  
Sbjct: 248 QILSKRLVQGNQTSGPIIRYLQYR--------VGADPDGIYGLNTEAAIKKFQQQNGLTA 299

Query: 154 SGMVDSSTLEAM 165
            G+V + T + +
Sbjct: 300 DGIVGAPTWQKL 311



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 107 SSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +  S+ RL++ L      D +               SAV+ FQ   G+ PSGM +S+T  
Sbjct: 185 TDTSILRLQKALNQLNITDKNGKPLDEDNFTGPATTSAVEKFQKMAGIIPSGMANSTTWN 244

Query: 164 AMNVPVDLRIRQ 175
           A+N  +  R+ Q
Sbjct: 245 AINQILSKRLVQ 256


>gi|119511006|ref|ZP_01630127.1| Peptidoglycan-binding domain 1 protein [Nodularia spumigena
           CCY9414]
 gi|119464351|gb|EAW45267.1| Peptidoglycan-binding domain 1 protein [Nodularia spumigena
           CCY9414]
          Length = 292

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 33/93 (35%), Gaps = 13/93 (13%)

Query: 78  TEKAIAF--YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           T  AI    YQ+    G    +    L LG+   +V  ++  L +          +  + 
Sbjct: 211 TRNAIFRNGYQNGYQSGTGGPVI---LGLGSRGSAVTEIQRALGVE--------PTGYYG 259

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                 V+ FQ R+ L   G+V   T  A+   
Sbjct: 260 PTTTRVVREFQARNYLRVDGIVGPETRSAILRN 292



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 8/64 (12%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+ S +V  ++  L +          +  +       V+ FQ R+ L   G+V   T
Sbjct: 160 LSLGSRSSAVTEVQRALGV--------QPTGYYGPTTTRVVRQFQARNNLRVDGIVGPET 211

Query: 162 LEAM 165
             A+
Sbjct: 212 RNAI 215


>gi|90419110|ref|ZP_01227021.1| peptidoglycan-binding protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90337190|gb|EAS50895.1| peptidoglycan-binding protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 249

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 8/91 (8%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV- 167
             V+ ++  L  +G       +        ++A++ FQ RHGL   G      L  +   
Sbjct: 80  PLVREVQTALAEAGIY--EAPVDGRPGPATDTAIRTFQSRHGLTTDGAATPLLLSQIRQV 137

Query: 168 -----PVDLRIRQLQVNLMRIKKLLEQKMGL 193
                    R   +     R++ + +     
Sbjct: 138 TAQAPNPSPRPNAIASIEERMRGIPQNVPDN 168


>gi|16801031|ref|NP_471299.1| hypothetical protein lin1965 [Listeria innocua Clip11262]
 gi|16414466|emb|CAC97195.1| lin1965 [Listeria innocua Clip11262]
 gi|313618251|gb|EFR90316.1| carboxy- processing protease [Listeria innocua FSL S4-378]
          Length = 496

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDIDTEYAVQRFQAANNLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|186682970|ref|YP_001866166.1| cell wall hydrolase/autolysin [Nostoc punctiforme PCC 73102]
 gi|186465422|gb|ACC81223.1| cell wall hydrolase/autolysin [Nostoc punctiforme PCC 73102]
          Length = 313

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 21/103 (20%)

Query: 76  AQTEKAIAFYQDI--------LSRGGWPEL----PIRPLHLGNSSVSVQR-LRERLIISG 122
           A T+ A+  +Q I             W  +      R +   ++  +V R L+ RL +  
Sbjct: 217 ANTKSAVEKFQAIIGVQTTGIADSTTWNAINLILAKRIIRPNHAGGAVVRYLQYRLGVEN 276

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           D          +    E  VK FQ ++GLD  G+V  ++ + +
Sbjct: 277 D--------GVYGPQTEVVVKNFQKQNGLDADGIVGPASWQKL 311



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)

Query: 108 SVSVQRLRE---RLIISGDLDPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             ++ RL++   RL I+ D + +  +   F  A  +SAV+ FQ   G+  +G+ DS+T  
Sbjct: 186 DATILRLQKSLNRLKIT-DKNGNALVEDGFTGANTKSAVEKFQAIIGVQTTGIADSTTWN 244

Query: 164 AMNVPVDLRI 173
           A+N+ +  RI
Sbjct: 245 AINLILAKRI 254


>gi|260565605|ref|ZP_05836089.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|265991216|ref|ZP_06103773.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260151673|gb|EEW86767.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|263002000|gb|EEZ14575.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 255

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             A  V  + ++ +   N+ ++      K           A +     N     + ++  
Sbjct: 48  FVASPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDP 103

Query: 222 -GRVDRQTPILHSRINRIMFNPY---WVIPRSIIQKDM-MALLRQDPQYLKDNNIHMIDE 276
             R    T   +     ++       +++  S   +   +A+ +Q  ++     I    E
Sbjct: 104 KFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTARRYGIAVGKQGLEFQGKATISAKRE 163

Query: 277 KGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN-TYMHDTPEPILF 332
             + +   E ++ +      F    D G  N + S  +     +++    +H T +P   
Sbjct: 164 WPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTI 223

Query: 333 NNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +     ++GC R+   +++DL   +   T 
Sbjct: 224 GSS---ASNGCFRMINEDVMDLYDRVTLGTE 251


>gi|118476424|ref|YP_893575.1| hypothetical protein BALH_0687 [Bacillus thuringiensis str. Al
           Hakam]
 gi|196046746|ref|ZP_03113969.1| conserved domain protein [Bacillus cereus 03BB108]
 gi|229183083|ref|ZP_04310313.1| hypothetical protein bcere0004_6600 [Bacillus cereus BGSC 6E1]
 gi|118415649|gb|ABK84068.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196022458|gb|EDX61142.1| conserved domain protein [Bacillus cereus 03BB108]
 gi|228600222|gb|EEK57812.1| hypothetical protein bcere0004_6600 [Bacillus cereus BGSC 6E1]
          Length = 253

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIEFY 316
           ++  Y       +   + +    E         +   +  ++  G    N + +  +   
Sbjct: 39  ENGNYA--KTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGL- 95

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +N   +H T       +     ++GC+R+ +
Sbjct: 96  DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|301052395|ref|YP_003790606.1| hypothetical protein BACI_c07830 [Bacillus anthracis CI]
 gi|300374564|gb|ADK03468.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIEFY 316
           ++  Y       +   + +    E         +   +  ++  G    N + +  +   
Sbjct: 39  ENGNYA--KTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGL- 95

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +N   +H T       +     ++GC+R+ +
Sbjct: 96  DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|225862730|ref|YP_002748108.1| hypothetical protein BCA_0817 [Bacillus cereus 03BB102]
 gi|225786367|gb|ACO26584.1| conserved domain protein [Bacillus cereus 03BB102]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIEFY 316
           ++  Y       +   + +    E         +   +  ++  G    N + +  +   
Sbjct: 39  ENGNYA--KTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGL- 95

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +N   +H T       +     ++GC+R+ +
Sbjct: 96  DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|254500753|ref|ZP_05112904.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
 gi|222436824|gb|EEE43503.1| ErfK/YbiS/YcfS/YnhG family [Labrenzia alexandrii DFL-11]
          Length = 220

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 8/142 (5%)

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
               P+    ++      Y V P     +  + + R    +  +  I    E  K    +
Sbjct: 77  PTSHPVGTIVVDPNNKFLYLVQPGGRAIRYGIGVGRAGFAWNGEAVIRFKREWPKWFPPD 136

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETS 341
           E+    P+   +   Q+ G  N + +  +  +  +++  Y +H T +P          +S
Sbjct: 137 EMIERDPDLERYRDGQEGGPRNPIGARGLYLWQGNKDTLYRIHSTNQPRSIGTN---ASS 193

Query: 342 GCVRV--RNIIDLDVWLLKDTP 361
           GC+R+  ++IIDL   +   T 
Sbjct: 194 GCIRMWHQDIIDLYDRVELGTK 215


>gi|319780158|ref|YP_004139634.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166046|gb|ADV09584.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 255

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 57/171 (33%), Gaps = 45/171 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V++    L  V+ G   +R  V +G+ D       + I      P W  P  +I +  
Sbjct: 121 IVVHLKERMLYFVQPGGDAIRYGVGIGK-DGFRWSGRANIQYGREWPTWTPPPEMIARK- 178

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                       E V W +         Q  G  N + +  +  
Sbjct: 179 ---------------------------PELVKWQAG--------QPGGLTNPLGARALYI 203

Query: 316 YSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           Y         +H +PE       +   +SGCVR+  ++IIDL   + K  P
Sbjct: 204 YQDGKDTGYRIHGSPEWWSIGQAM---SSGCVRLINQDIIDLYSRVSKKNP 251


>gi|218675455|ref|ZP_03525124.1| hypothetical protein RetlG_30846 [Rhizobium etli GR56]
          Length = 86

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
           + P        G  N + +  I         +H T +P          +SGC R+   ++
Sbjct: 14  KNPRLPAVVKAGPANPLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYREDV 69

Query: 350 IDLDVWLLKDT 360
            +L   +   T
Sbjct: 70  EELYEMVQPGT 80


>gi|188993173|ref|YP_001905183.1| hypothetical protein xccb100_3778 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734933|emb|CAP53145.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 632

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 30/85 (35%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPS 154
               L        V +L++ L   G  D          A+      AVK FQ  HGL   
Sbjct: 429 TSGLLREKAHGAEVLKLQQTLQQLGYKDAKGNELNADGAYGQRTGEAVKAFQRAHGLQED 488

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+V   TL+A+       +   + N
Sbjct: 489 GVVGGDTLKALKQAEKTPLLSEKTN 513


>gi|91978840|ref|YP_571499.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91685296|gb|ABE41598.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 197

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 51/193 (26%), Gaps = 48/193 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L +             ++V      L  V+     LR  + VGR   Q      +I R  
Sbjct: 49  LRKQMVFFRSNEPPGTIVVQTSERYLYLVQGNNRALRYGIGVGREGFQ-WQGLLKIARKA 107

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P WV P  +IQ+                                        P     
Sbjct: 108 EWPDWVPPPEMIQRQ---------------------------------------PYLPRF 128

Query: 300 QDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
              G  N + +  +   S    Y +H T  P          +SGC R+ N    DL   +
Sbjct: 129 MAGGPGNPLGARAMYLGS--TVYRIHGTNRPDTIGT---AISSGCFRLVNADVADLYDRV 183

Query: 357 LKDTPTWSRYHIE 369
              T    R   E
Sbjct: 184 PVGTKVVVRQRPE 196


>gi|210615974|ref|ZP_03290874.1| hypothetical protein CLONEX_03093 [Clostridium nexile DSM 1787]
 gi|210149979|gb|EEA80988.1| hypothetical protein CLONEX_03093 [Clostridium nexile DSM 1787]
          Length = 421

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E+L +I+G     P   +   +     ++V+ FQ   GL  +
Sbjct: 337 PGYTLSNGSSGDKVRQMQEQLNVIAGAYPAIPKVAVDGIYGPATAASVRKFQSVFGLPET 396

Query: 155 GMVDSSTLEAMN 166
           G VD  T   ++
Sbjct: 397 GTVDYRTWYKIS 408


>gi|182438957|ref|YP_001826676.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|178467473|dbj|BAG21993.1| putative peptidodoglycan-binding membrane protein [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 431

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLDPS--GM 156
             L  G+    V  L+ RL   G+   S  +   ++   V  +V ++Q    +     G+
Sbjct: 350 SSLRPGDRGPEVAELQTRLRTVGEWLYSGPVDGSSYSDQVAHSVAIYQSYKAIQGDPIGV 409

Query: 157 VDSSTLEAMNV 167
              +T  A+  
Sbjct: 410 YGPNTRRALEQ 420


>gi|254974151|ref|ZP_05270623.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-66c26]
 gi|255091552|ref|ZP_05321030.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile CIP
           107932]
 gi|255313279|ref|ZP_05354862.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-76w55]
 gi|255515969|ref|ZP_05383645.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-97b34]
 gi|255649060|ref|ZP_05395962.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-37x79]
 gi|260682251|ref|YP_003213536.1| putative spore peptidoglycan hydrolase [Clostridium difficile
           CD196]
 gi|260685850|ref|YP_003216983.1| putative spore peptidoglycan hydrolase [Clostridium difficile
           R20291]
 gi|306519173|ref|ZP_07405520.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-32g58]
 gi|260208414|emb|CBA60957.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile CD196]
 gi|260211866|emb|CBE02295.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile R20291]
          Length = 423

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAV 142
           +  +  G     P   L +G+S   V+ ++ +L  IS        +     + A  E+AV
Sbjct: 324 RAPIVSGVPVSFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGADTENAV 383

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
           K+FQ   GL  SG+VD  T   ++ 
Sbjct: 384 KIFQGIFGLPQSGVVDFKTWYEISR 408


>gi|15614194|ref|NP_242497.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
 gi|25453281|sp|Q9KCE0|SLEB_BACHD RecName: Full=Spore cortex-lytic enzyme; Short=SCLE; Flags:
           Precursor
 gi|10174248|dbj|BAB05350.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
          Length = 330

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 2/83 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V  L+ RL   G    +K +   F      AV+ +Q   G++  G+V       
Sbjct: 38  GATGDDVVELQARLQYIGFY--NKKIDGVFGWSTYWAVRNYQYEFGMEVDGLVGPEMKAK 95

Query: 165 MNVPVDLRIRQLQVNLMRIKKLL 187
           +    +     +   L + +K  
Sbjct: 96  LEKTTNFNRDFVDRALTQGRKFT 118


>gi|163791469|ref|ZP_02185877.1| endolysin [Carnobacterium sp. AT7]
 gi|159873282|gb|EDP67378.1| endolysin [Carnobacterium sp. AT7]
          Length = 367

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 8/93 (8%)

Query: 76  AQTEKAIAFYQDI----LSRGGWPELPI---RPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           + T++ +             G W        R L  G++   V  ++  L+ +       
Sbjct: 270 SLTKQGLIKLIQKTVGSAIDGYWGPKTAANMRTLKSGSTGWDVYAIQAFLLGNNF-QIVG 328

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                F      AVK FQ+  GL   G+V   T
Sbjct: 329 MPDNTFGPNTVRAVKEFQIVSGLQSDGIVGPKT 361


>gi|1351737|sp|P49320|YBP1_STRAU RecName: Full=Uncharacterized protein in bpoA1 3'region; AltName:
           Full=ORF1
 gi|522151|gb|AAC43254.1| hypothetical 118 amino acid truncated protein encoded by ORF1
           [Streptomyces aureofaciens]
          Length = 118

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 9/65 (13%)

Query: 106 NSSVSVQRLR----ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +S  +V+ L+      L   G       +   F     +AV+ FQ   GL P G+V   T
Sbjct: 47  DSGDAVKALQCELYNSLAYMG-----PDVDGYFGPKTLAAVQKFQTCTGLKPDGIVGPLT 101

Query: 162 LEAMN 166
              ++
Sbjct: 102 WAKLD 106


>gi|18496915|ref|NP_569765.1| hypothetical protein TM4_gp30 [Mycobacterium phage TM4]
 gi|4336066|gb|AAD17597.1| gp30 [Mycobacterium phage TM4]
          Length = 400

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 103 HLGNSSVSVQRLRERLII----SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            LG     V+ ++++LI       D  P    S  +D   ++A+  FQ R GL  +G+ D
Sbjct: 7   QLGMQGEQVKVIQQKLIAKYQWVRDRYPRLTASGVYDVNTQAAIVEFQFRAGLPVTGIAD 66

Query: 159 SST---LEAMNVPVDLRIRQLQVNL 180
            +T   L A+      R R + +  
Sbjct: 67  YATQVRLGAVAPAPPPRQRIMVLTF 91


>gi|84494649|ref|ZP_00993768.1| putative lipoprotein [Janibacter sp. HTCC2649]
 gi|84384142|gb|EAQ00022.1| putative lipoprotein [Janibacter sp. HTCC2649]
          Length = 236

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 57/246 (23%), Gaps = 72/246 (29%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG+   +V   + RL   G           F    + AV   Q   G   SG  D S
Sbjct: 40  VLVLGSKGSAVTTAQTRLNALGYWC--GTPDGTFGHVTQQAVWALQKSAGARRSGRFDLS 97

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T   +   V  R                +      + V++    L  + NGK+       
Sbjct: 98  TWGLLERGVKPR---------------PKTTSGTAIEVDLAKQILMVIGNGKLVYTLNTS 142

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            G  +R                                  + P      +  +       
Sbjct: 143 TGSGERYYSGGAW------------------------KTARTPS----GSYSIYYRW--- 171

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                  W                  ++ +     Y + +  +H +             +
Sbjct: 172 ----PNGWQ---------------NGSLGAMWRPTYWKGDFAIHGSQS-----IPPYPAS 207

Query: 341 SGCVRV 346
            GC RV
Sbjct: 208 HGCCRV 213


>gi|242373732|ref|ZP_04819306.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348552|gb|EES40154.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           M23864:W1]
          Length = 526

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   LG+ + +V+ ++  L   G        S  FD+ +ESA+K FQ  + LD +G  D 
Sbjct: 440 KTYQLGDDNKNVKTMKIGLTALGY--KVDNESNKFDSDLESAIKSFQRDNHLDVTGQFDK 497

Query: 160 ST 161
            T
Sbjct: 498 KT 499


>gi|39933289|ref|NP_945565.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|192288641|ref|YP_001989246.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39652914|emb|CAE25656.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
 gi|192282390|gb|ACE98770.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 175

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 41/163 (25%), Gaps = 45/163 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++V      L  V      +R  V VG+  +Q     ++I+    NP W  
Sbjct: 37  FRGDYSPGTIVVRTGERRLYLVVEPGHAVRYPVGVGKAGKQ-WAGVTKIDGKFRNPAWAP 95

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + P        G   
Sbjct: 96  PAEVKR---------------------------------------DVPTIPDVIPGGSPA 116

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    +         +H T  P        F + GC+R+ N
Sbjct: 117 NPMGVAAMTLAGGE-YAIHGTNRPQSIG---GFVSYGCIRMLN 155


>gi|229195071|ref|ZP_04321846.1| hypothetical protein bcere0001_6460 [Bacillus cereus m1293]
 gi|228588300|gb|EEK46343.1| hypothetical protein bcere0001_6460 [Bacillus cereus m1293]
          Length = 219

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +    +H T       +     ++GC+R+
Sbjct: 33  TKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKYEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|288919997|ref|ZP_06414318.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
 gi|288348650|gb|EFC82906.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
          Length = 170

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 20/77 (25%), Gaps = 16/77 (20%)

Query: 300 QDPGKINAMASTKIEFY------SRNN-----TYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +      A                          +H T +P       R  + GC+R+ N
Sbjct: 94  RPSNPNGAYGPYAFGLSGFSTSLDDFGGRDPVIGIHGTNDPSSLG---RDVSHGCIRLSN 150

Query: 349 --IIDLDVWLLKDTPTW 363
             I  L   +   TP  
Sbjct: 151 DSITRLAQTVPLGTPVE 167


>gi|166153471|ref|YP_001653985.1| peptidoglycan binding protein [Bacillus thuringiensis]
 gi|165875310|gb|ABY68467.1| putative peptidoglycan binding protein [Bacillus thuringiensis]
          Length = 178

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V +L+  L   G       +   F   ++ +V  +Q  H L  +G+V   
Sbjct: 103 TLRKGSTGYWVVKLQGFLQKIGYYS--GRIDGQFGHILDGSVSNYQRDHRLIINGIVGPK 160

Query: 161 TLEAMNVP 168
           T   +   
Sbjct: 161 TWCQLERD 168


>gi|170751396|ref|YP_001757656.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170657918|gb|ACB26973.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 226

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 7/93 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY- 322
                   +  KG               P+    +  G  N + +  +     +R+  + 
Sbjct: 118 FSWKGEARVGRKGVWPDWSPTVTMVSLHPDLPRTRKGGLDNPLGARALYLYQGNRDILFR 177

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +H T EP      +   +SGCVR+ N  D+   
Sbjct: 178 IHGTNEPWSIGEQM---SSGCVRMLN-EDIADL 206


>gi|206977215|ref|ZP_03238113.1| conserved domain protein [Bacillus cereus H3081.97]
 gi|206744531|gb|EDZ55940.1| conserved domain protein [Bacillus cereus H3081.97]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   + +    E         +   +  ++  G    N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|167635957|ref|ZP_02394264.1| conserved domain protein [Bacillus anthracis str. A0442]
 gi|170689143|ref|ZP_02880341.1| conserved domain protein [Bacillus anthracis str. A0465]
 gi|254683051|ref|ZP_05146912.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725838|ref|ZP_05187620.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus anthracis str. A1055]
 gi|254739887|ref|ZP_05197579.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus anthracis str. Kruger
           B]
 gi|167528629|gb|EDR91389.1| conserved domain protein [Bacillus anthracis str. A0442]
 gi|170666891|gb|EDT17656.1| conserved domain protein [Bacillus anthracis str. A0465]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 9/94 (9%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEE----VDWNSPEPPNFIFRQDPGKINAMASTKIE 314
             + ++ N      +   + +    E     ++    +  +          N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIINKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|163761549|ref|ZP_02168621.1| hypothetical protein HPDFL43_21397 [Hoeflea phototrophica DFL-43]
 gi|162281263|gb|EDQ31562.1| hypothetical protein HPDFL43_21397 [Hoeflea phototrophica DFL-43]
          Length = 260

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 42/170 (24%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +V+     L  V    + LR  V +GR D       + +      P W  P S+I++   
Sbjct: 124 VVDTADRFLYLVREDGLALRYGVGIGR-DGFAWSGRAIVQWKQEWPKWTPPASMIERQ-- 180

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                      E   W++           PG  N + +  +  +
Sbjct: 181 --------------------------PELERWSAANGGM-----PPGLDNPLGARALYIF 209

Query: 317 SR--NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
               +  Y +H +PE           +SGCVR+  +++ DL   +   TP
Sbjct: 210 QDGVDTLYRVHGSPEYKSIGK---AVSSGCVRLINQDVCDLYDRVPTRTP 256


>gi|316935958|ref|YP_004110940.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603672|gb|ADU46207.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 228

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 296 FIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                  G  N + +  +     +++  + +H T +P          +SGC+R+ N
Sbjct: 132 LPASVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQPEYIGAS---ISSGCIRMTN 184


>gi|13471521|ref|NP_103087.1| hypothetical protein mll1519 [Mesorhizobium loti MAFF303099]
 gi|14022263|dbj|BAB48873.1| mll1519 [Mesorhizobium loti MAFF303099]
          Length = 263

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 60/199 (30%), Gaps = 48/199 (24%)

Query: 158 DSSTLEAMNVP-----VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           D++T+ A           + + +L    +R             ++V++    L  V +G 
Sbjct: 54  DTATMYAARTDEGYQLPAIPVAKLDPKFVRQIVADPTGEKPGTIVVDVSEHFLYLVRDGG 113

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             +R  V +G+         + +      P W  P  +IQ+     L +           
Sbjct: 114 KAIRYGVSLGKAG-FGWTGSAVVQARKKWPVWTPPPEMIQRR--PELAK----------- 159

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEP 329
                                  F     PG  + + +  +      ++  Y +H TPE 
Sbjct: 160 -----------------------FKDGMPPGPQSPLGARALYLFRDGKDTMYRLHGTPEW 196

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     +SGCVR  N
Sbjct: 197 DSIGKN---ASSGCVRFMN 212


>gi|332671430|ref|YP_004454438.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332340468|gb|AEE47051.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 353

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 24/78 (30%), Gaps = 3/78 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM-VD 158
           R L  G+    V RL+  L   G  D        F + +  AV  F    G   +    D
Sbjct: 122 RVLRPGDQGEDVARLQRFLTGLGLYDGRA--DGRFGSALGRAVARFNADAGRGSTKTDFD 179

Query: 159 SSTLEAMNVPVDLRIRQL 176
             T+  +          L
Sbjct: 180 PGTVVWVGPDPLEVAEPL 197


>gi|255521659|ref|ZP_05388896.1| carboxy-terminal processing proteinase [Listeria monocytogenes FSL
           J1-175]
          Length = 323

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 235 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 292

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 293 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 323


>gi|222094508|ref|YP_002528568.1| protein erfk/srfk precursor [Bacillus cereus Q1]
 gi|221238566|gb|ACM11276.1| protein erfK/srfK precursor [Bacillus cereus Q1]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   + +    E         +   +  ++  G    N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|254852755|ref|ZP_05242103.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300763836|ref|ZP_07073833.1| carboxyl-terminal protease [Listeria monocytogenes FSL N1-017]
 gi|258606083|gb|EEW18691.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
 gi|300515572|gb|EFK42622.1| carboxyl-terminal protease [Listeria monocytogenes FSL N1-017]
          Length = 496

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|226224454|ref|YP_002758561.1| carboxy-terminal processing proteinase [Listeria monocytogenes
           Clip81459]
 gi|254826107|ref|ZP_05231108.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|254931979|ref|ZP_05265338.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|254992637|ref|ZP_05274827.1| carboxy-terminal processing proteinase [Listeria monocytogenes FSL
           J2-064]
 gi|225876916|emb|CAS05625.1| Putative carboxy-terminal processing proteinase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|293583530|gb|EFF95562.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
 gi|293595347|gb|EFG03108.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
 gi|328466201|gb|EGF37358.1| carboxy-terminal processing proteinase [Listeria monocytogenes
           1816]
 gi|328473572|gb|EGF44409.1| carboxy-terminal processing proteinase [Listeria monocytogenes 220]
 gi|332312292|gb|EGJ25387.1| Carboxy-terminal processing protease [Listeria monocytogenes str.
           Scott A]
          Length = 496

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|46908083|ref|YP_014472.1| carboxypeptidase family protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093234|ref|ZP_00231006.1| carboxypeptidase family protein [Listeria monocytogenes str. 4b
           H7858]
 gi|46881353|gb|AAT04649.1| carboxypeptidase family protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47018366|gb|EAL09127.1| carboxypeptidase family protein [Listeria monocytogenes str. 4b
           H7858]
          Length = 468

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 380 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQAANKLDVTGIM 437

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 438 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 468


>gi|206978223|ref|ZP_03239103.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|206743582|gb|EDZ55009.1| conserved hypothetical protein [Bacillus cereus H3081.97]
          Length = 153

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 39/169 (23%), Gaps = 59/169 (34%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKTATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
                     +H T             T GC+R+ N      WL +  P
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFERIP 145


>gi|52144568|ref|YP_082261.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus E33L]
 gi|51978037|gb|AAU19587.1| conserved hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein
           [Bacillus cereus E33L]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   + +    E         +   +  ++  G    N + +  + 
Sbjct: 35  LSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|228988284|ref|ZP_04148379.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771456|gb|EEM19927.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 153

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|154246422|ref|YP_001417380.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154160507|gb|ABS67723.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 497

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 95  PELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-- 150
           P  P + L    G+  VSV RL++RL   G        +  FD   + AV+LFQ R    
Sbjct: 233 PRFPGKYLMEKTGDK-VSVTRLQKRLADMG--ASPGAPTGVFDTPTKYAVQLFQARSVDL 289

Query: 151 ----LDPSGMVDSSTLEAMNVP 168
               L+  G+V   T  A+  P
Sbjct: 290 DGAPLEIDGIVGPMTWGALFGP 311


>gi|194289051|ref|YP_002004958.1| lytic protein [Cupriavidus taiwanensis LMG 19424]
 gi|193222886|emb|CAQ68891.1| putative lytic enzyme, similar to phage phiCTX_orf11 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 268

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG+    V+ L+  L   G       ++  FDA   +AV+  Q R+GL   G+    T
Sbjct: 4   LRLGDVGADVRELQRLLRERG---AQLEMTGDFDAATLAAVRAAQARYGLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMR 182
           L A+             +L R
Sbjct: 61  LLALQRDTRQPAHLSAADLQR 81


>gi|217958339|ref|YP_002336887.1| hypothetical protein BCAH187_A0913 [Bacillus cereus AH187]
 gi|217066573|gb|ACJ80823.1| conserved domain protein [Bacillus cereus AH187]
          Length = 253

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|116249821|ref|YP_765659.1| hypothetical protein RL0055 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|9392598|gb|AAF87210.1|AF228577_4 unknown [Rhizobium leguminosarum bv. viciae]
 gi|115254469|emb|CAK05543.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 227

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 55/224 (24%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
              V++A ++F   +GL            A      + I +++    R     +      
Sbjct: 36  GPTVQTA-QIFNDAYGLTKD---------AGYSLPAIPIDRVKPQFRRQVVSYQTTERPG 85

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            ++VN     L  +      +R  + VG+         + +      P W  P+ +  + 
Sbjct: 86  TIIVNTRERFLYYILANGKAMRYGIGVGKQGFA-WAGTAYVAWKQEWPNWHPPKEMAVRR 144

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
               L +          ++ D  G                       PG  N + +  + 
Sbjct: 145 --PDLAK----------YVEDGMG-----------------------PGLSNPLGARAMY 169

Query: 315 FYSRNN----TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
            ++ +       +H TPE           +SGC+R+  +++IDL
Sbjct: 170 LFNEDGKDTLFRLHGTPEWASIGT---AASSGCIRLMNQDVIDL 210


>gi|90580763|ref|ZP_01236566.1| putative general secretion pathway protein A [Vibrio angustum S14]
 gi|90438031|gb|EAS63219.1| putative general secretion pathway protein A [Vibrio angustum S14]
          Length = 523

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G +   V  L ++L     L         FD  +   ++ FQ    L   G+    
Sbjct: 445 SIRFGQNGPRVAWLDQQLND--FLGEESPRKGYFDQSILDKLRRFQRSQDLAADGIAGPM 502

Query: 161 TL 162
           TL
Sbjct: 503 TL 504


>gi|89075907|ref|ZP_01162282.1| putative general secretion pathway protein A [Photobacterium sp.
           SKA34]
 gi|89048348|gb|EAR53926.1| putative general secretion pathway protein A [Photobacterium sp.
           SKA34]
          Length = 523

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G +   V  L ++L     L         FD  +   ++ FQ    L   G+    
Sbjct: 445 SIRFGQNGPRVAWLDQQLND--FLGEESPRKGYFDQSILDKLRRFQRSQDLAADGIAGPM 502

Query: 161 TL 162
           TL
Sbjct: 503 TL 504


>gi|298293414|ref|YP_003695353.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296929925|gb|ADH90734.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 263

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 33/99 (33%), Gaps = 9/99 (9%)

Query: 95  PELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH---- 149
           P      L  G      V RL+ RL     L  +      F    E AV+LFQ R+    
Sbjct: 9   PIYAGVVLENGMLGSPEVARLQARLNDV--LGSALIEDGDFGVATEDAVRLFQARYTDPT 66

Query: 150 --GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
              ++  G V   T  A+     L   +      R + L
Sbjct: 67  GGEIEVDGRVGPETWAALFGAESLGAAKPAAGDTRGRVL 105


>gi|229158636|ref|ZP_04286694.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus ATCC 4342]
 gi|228624620|gb|EEK81389.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus ATCC 4342]
          Length = 153

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NGK     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|21283039|ref|NP_646127.1| carboxy-terminal processing proteinase ctpA [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49486261|ref|YP_043482.1| putative protease [Staphylococcus aureus subsp. aureus MSSA476]
 gi|297207922|ref|ZP_06924355.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300912006|ref|ZP_07129449.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|81696321|sp|Q6G9E1|CTPAL_STAAS RecName: Full=Probable CtpA-like serine protease
 gi|81762507|sp|Q8NWR2|CTPAL_STAAW RecName: Full=Probable CtpA-like serine protease
 gi|21204478|dbj|BAB95175.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus aureus subsp. aureus MW2]
 gi|49244704|emb|CAG43139.1| putative protease [Staphylococcus aureus subsp. aureus MSSA476]
 gi|296887496|gb|EFH26396.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300886252|gb|EFK81454.1| carboxy-terminal processing protease CtpA [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|329733430|gb|EGG69762.1| peptidase, S41 family [Staphylococcus aureus subsp. aureus 21193]
          Length = 496

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G    ++     FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGYKVDNET--TQFDQALENQVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|85707458|ref|ZP_01038538.1| hypothetical protein ROS217_02920 [Roseovarius sp. 217]
 gi|163748158|ref|ZP_02155464.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|85668046|gb|EAQ22927.1| hypothetical protein ROS217_02920 [Roseovarius sp. 217]
 gi|161378563|gb|EDQ03026.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 213

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 42/166 (25%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
           +   +  +    + V+  A  L  +E G   +R  V + R D   P     I R +  P+
Sbjct: 56  RVAAKDGLTPGDIHVDAVARYLYHIEEGGTAMRYGVAIARGDLYEP-GTYTIKRKVRWPH 114

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           W   +++I         +DP+   D    + D                         +PG
Sbjct: 115 WQPTQNMI--------DRDPELYAD----IADG-----------------------MEPG 139

Query: 304 KINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV 346
             NA+ S  +  F    +TY  +H TP+P       R  +SGCVR+
Sbjct: 140 PKNALGSRALYLFLGDRDTYLRIHGTPQPRSIG--GRA-SSGCVRM 182


>gi|37520189|ref|NP_923566.1| hypothetical protein gll0620 [Gloeobacter violaceus PCC 7421]
 gi|35211182|dbj|BAC88561.1| gll0620 [Gloeobacter violaceus PCC 7421]
          Length = 424

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 9/103 (8%)

Query: 86  QDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGD-----LDPSKGLSVAFDAY 137
           +   ++ GW EL       G    +  +V+ L+ +L+  G            +   F   
Sbjct: 21  RAERAQTGWDELRDAEETQGTFVRNREAVRSLQRQLVFLGYTTGAGPSSGATIDGRFGPG 80

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNL 180
            E AV  FQ  HGL   G  D  T +++   V  R  QL    
Sbjct: 81  TERAVHTFQREHGLAV-GNFDRKTAQSLVQAVAERATQLPATT 122


>gi|295702691|ref|YP_003595766.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
 gi|294800350|gb|ADF37416.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus megaterium DSM 319]
          Length = 196

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 9/60 (15%)

Query: 304 KINAMASTKIEFYSRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             N +    +   +R        +H    P        + +SGC+R+ +  +   WL   
Sbjct: 30  PRNPLGDRWLGLNARGTYGTTYAIHGNNNPSSIGT---YASSGCIRMYD--EEVRWLFDR 84


>gi|160937909|ref|ZP_02085267.1| hypothetical protein CLOBOL_02803 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439135|gb|EDP16889.1| hypothetical protein CLOBOL_02803 [Clostridium bolteae ATCC
           BAA-613]
          Length = 416

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L  I +     P       + +   +AV+ FQ   GL  +
Sbjct: 332 PGSDLTIGSSGDKVRQMQEQLDEIATVYSAIPRVTPDGIYGSGTANAVREFQSIFGLPQT 391

Query: 155 GMVDSSTL 162
           G+VD +T 
Sbjct: 392 GVVDFATW 399


>gi|85713880|ref|ZP_01044869.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85699006|gb|EAQ36874.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 187

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 44/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       +     +++      L  V      LR  + VGR D        RI+     
Sbjct: 45  RQLVYFPSRYAPGTIVIRTGERRLYLVLPQGQALRYGIGVGR-DGFRWSGVHRISAKKEW 103

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 104 PSWTPPSQMLRRR---------------------------------------PDLPRFMK 124

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP       R  +SGC R+ N
Sbjct: 125 GGLENPLGARAMYLG-STLYRIHGSNEPETIG---RAVSSGCFRMTN 167


>gi|320101740|ref|YP_004177331.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
 gi|319749022|gb|ADV60782.1| peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 [Isosphaera
           pallida ATCC 43644]
          Length = 702

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 34/117 (29%), Gaps = 7/117 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL  G +   V+RL+  L    +  P   +   F    + AV  FQ    L  +G+V 
Sbjct: 320 DSPLAFGATGPRVERLQRLLNRRLEPSPGLVVDGDFGPATQEAVIRFQKERHLGDNGVVT 379

Query: 159 SSTLEAMNV-------PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
                A+                  Q+N        E           +P  +  A 
Sbjct: 380 PEVWRALGELPPDPAGDPQAEADPAQLNAEFATLRPEPAEPAANDPTAVPFVTARAW 436


>gi|302545808|ref|ZP_07298150.1| putative peptidoglycan-binding membrane protein [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302463426|gb|EFL26519.1| putative peptidoglycan-binding membrane protein [Streptomyces
           himastatinicus ATCC 53653]
          Length = 497

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 98  PIRP--LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS- 154
           P  P  L  G+S   V  L++RL     L         +D  V+ AV  +Q R+ +    
Sbjct: 421 PTGPPVLREGDSGAEVTELQKRLTQL--LIYIGVADGEYDDGVKDAVAAYQDRYDITGDP 478

Query: 155 -GMVDSSTL 162
            G+   +T 
Sbjct: 479 EGVYGENTR 487


>gi|124022435|ref|YP_001016742.1| hypothetical protein P9303_07261 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962721|gb|ABM77477.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 243

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 43/158 (27%), Gaps = 51/158 (32%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +  + +G+      V +G     TP    ++   + NP +   +S             
Sbjct: 123 REISVIRDGEKLGPWPVAIGDPRTPTPTGVFKVENKVTNPQYQSTKS------------- 169

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN 320
                             V                     G  + +    I F    +N 
Sbjct: 170 ----------------GRVNPAI-----------------GVASPLGDRWIGFLQSGQNQ 196

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
             +H TP P   N      T+GCVR+   ++  L   +
Sbjct: 197 FGIHGTPWPYWVN-ARAAVTNGCVRMLHAHVRQLFDVV 233


>gi|260771263|ref|ZP_05880190.1| general secretion pathway protein A [Vibrio furnissii CIP 102972]
 gi|260613860|gb|EEX39052.1| general secretion pathway protein A [Vibrio furnissii CIP 102972]
          Length = 530

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            + I        R  W     + L  G    ++  L  +L     L   +     +D  V
Sbjct: 431 REWIEPLWQGEYRVVWQPSFYQTLRSGMRGEAITLLDAKLSRL--LGEPERHVTEYDQEV 488

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  V++FQ    +   G+    TL  ++
Sbjct: 489 KRKVEIFQRWQHMQVDGIAGRQTLRQLD 516


>gi|255018611|ref|ZP_05290737.1| hypothetical protein LmonF_14491 [Listeria monocytogenes FSL
           F2-515]
          Length = 237

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 149 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 206

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 207 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 237


>gi|224500081|ref|ZP_03668430.1| hypothetical protein LmonF1_10539 [Listeria monocytogenes Finland
           1988]
          Length = 496

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|16803891|ref|NP_465376.1| hypothetical protein lmo1851 [Listeria monocytogenes EGD-e]
 gi|224501349|ref|ZP_03669656.1| hypothetical protein LmonFR_02300 [Listeria monocytogenes FSL
           R2-561]
 gi|254829153|ref|ZP_05233840.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|254831548|ref|ZP_05236203.1| hypothetical protein Lmon1_09343 [Listeria monocytogenes 10403S]
 gi|254899452|ref|ZP_05259376.1| hypothetical protein LmonJ_06549 [Listeria monocytogenes J0161]
 gi|254912409|ref|ZP_05262421.1| carboxyl-terminal protease [Listeria monocytogenes J2818]
 gi|254936736|ref|ZP_05268433.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|255025442|ref|ZP_05297428.1| hypothetical protein LmonocytFSL_02284 [Listeria monocytogenes FSL
           J2-003]
 gi|16411305|emb|CAC99929.1| lmo1851 [Listeria monocytogenes EGD-e]
 gi|258601563|gb|EEW14888.1| conserved hypothetical protein [Listeria monocytogenes FSL N3-165]
 gi|258609333|gb|EEW21941.1| conserved hypothetical protein [Listeria monocytogenes F6900]
 gi|293590391|gb|EFF98725.1| carboxyl-terminal protease [Listeria monocytogenes J2818]
          Length = 496

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTEYAVQRFQTANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|310644287|ref|YP_003949046.1| carboxyl-terminal protease [Paenibacillus polymyxa SC2]
 gi|309249238|gb|ADO58805.1| Carboxyl-terminal protease [Paenibacillus polymyxa SC2]
          Length = 488

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + L    +S  V+  +  L   G           FD   ES+V  FQ    L  +
Sbjct: 386 PLNKEKSLKYNMNSSDVKNAQIILQGLGY--KPGREDGYFDKVTESSVMAFQKEAKLTAN 443

Query: 155 GMVDSSTLEAMNVPVDLRIR------QLQVNLMRIK 184
           G++D+ T  AM   +  +IR      QL+  +  I+
Sbjct: 444 GIIDAKTAAAMEAKLIEKIRDPKNDNQLKQGIEEIR 479


>gi|293189417|ref|ZP_06608137.1| putative surface protein PspA [Actinomyces odontolyticus F0309]
 gi|292821507|gb|EFF80446.1| putative surface protein PspA [Actinomyces odontolyticus F0309]
          Length = 513

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G +   V+  R RL +      S  L+   DA   +AVK FQ R GL  +G+V
Sbjct: 289 ATNTLTWGMNGTKVRIARVRLGLW----HSNKLASV-DAPFVAAVKNFQQRAGLPVTGVV 343

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           D +T +AM+      + Q Q   + + 
Sbjct: 344 DKATWDAMDTGYPWTVDQYQATPLPLT 370


>gi|226324793|ref|ZP_03800311.1| hypothetical protein COPCOM_02579 [Coprococcus comes ATCC 27758]
 gi|225207241|gb|EEG89595.1| hypothetical protein COPCOM_02579 [Coprococcus comes ATCC 27758]
          Length = 128

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E+L +I+G         +   +     S+V+ FQ   GL  +
Sbjct: 44  PGYTLSQGSSGTKVRQMQEQLNVIAGAYPAIPKITVDGIYGPATASSVRKFQSVFGLPVT 103

Query: 155 GMVDSSTL 162
           G VD  T 
Sbjct: 104 GTVDYRTW 111


>gi|218679908|ref|ZP_03527805.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium etli CIAT 894]
          Length = 120

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRVRN 348
             G  N + +  +  Y         +H T +P          +SGC+R+ N
Sbjct: 52  PGGPNNPLGARAMYLYRGGGDTHFRIHGTNQPQSIG---LAMSSGCIRMMN 99


>gi|23008969|ref|ZP_00050195.1| COG3409: Putative peptidoglycan-binding domain-containing protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 151

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN--VPV 169
             L++RL   G           F    + AV   Q   GL   G+V  +T  A++  V  
Sbjct: 2   VALQQRLADLGYF--IGAPDGDFGGGTQQAVWALQKAAGLSRDGVVGPATQAALDEGVTP 59

Query: 170 DLRIRQ---LQVNLMRIKKLLEQK 190
             R      ++++L R   L  + 
Sbjct: 60  QPRSGSGKVVEIDLDRQLLLAVED 83


>gi|325661782|ref|ZP_08150405.1| hypothetical protein HMPREF0490_01140 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472035|gb|EGC75250.1| hypothetical protein HMPREF0490_01140 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 101

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E L +I+G         +   +     ++VK FQ   GL  +
Sbjct: 17  PGYVLENGSSGNKVRQMQEELNVIAGAYPAIPKITVDGIYGPATAASVKKFQSVFGLPAT 76

Query: 155 GMVDSSTLEAMN 166
           G VD  T   ++
Sbjct: 77  GTVDYRTWYKIS 88


>gi|209548410|ref|YP_002280327.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534166|gb|ACI54101.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 268

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 65/198 (32%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++Q   +R +   +       V+V+  A  L  VE     +R  V +GR D   
Sbjct: 104 PAIPVSRVQPQFLRQEVDYQTAERPGTVIVDTKAHFLYFVEENGKAMRYGVGLGR-DGYA 162

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P      +M++   +   +  +N                   
Sbjct: 163 WSGRGVIQWKQKWPRWTPPV-----EMVSRQPEVRAFSAENGGM---------------- 201

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       +PG  N + +  +      ++  Y +H TP+           +SGCVR
Sbjct: 202 ------------NPGLQNPLGARAMYIFKDGQDTLYRIHGTPDWQSIGK---ATSSGCVR 246

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++++DL   L     
Sbjct: 247 MLNQDVVDLYDRLPAKAE 264


>gi|90020795|ref|YP_526622.1| general secretion pathway protein A [Saccharophagus degradans 2-40]
 gi|89950395|gb|ABD80410.1| Peptidoglycan-binding domain 1 [Saccharophagus degradans 2-40]
          Length = 563

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G  S ++  L ++     D       +  F A +   VK+FQ  +GL P G+V 
Sbjct: 482 TEALIQGQRSPAITWLAQKFAEL-DGREKPLTNDHFSAALAKRVKIFQRNNGLTPDGIVG 540

Query: 159 SSTL 162
             TL
Sbjct: 541 EQTL 544


>gi|302385683|ref|YP_003821505.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
 gi|302196311|gb|ADL03882.1| Peptidoglycan-binding domain 1 protein [Clostridium saccharolyticum
           WM1]
          Length = 421

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V++++E+L  I +     P       F      AV+ FQ   GL  +
Sbjct: 337 PGFNLTVGASGDKVRQVQEQLDTIATVYTAIPRIRADGIFGPATAEAVRQFQSIFGLPVT 396

Query: 155 GMVDSSTL 162
           G++D +T 
Sbjct: 397 GVIDFATW 404


>gi|39937502|ref|NP_949778.1| ErfK/YbiS/YcfS/YnhG protein [Rhodopseudomonas palustris CGA009]
 gi|192293291|ref|YP_001993896.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39651361|emb|CAE29883.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
 gi|192287040|gb|ACF03421.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 227

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 296 FIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                  G  N + +  +     +++  + +H T +P          +SGC+R+ N
Sbjct: 132 LPSSVPGGIDNPLGARALYLYQGNKDTLFRIHGTNQPEYIGAS---ISSGCIRMTN 184


>gi|84685769|ref|ZP_01013665.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84665862|gb|EAQ12336.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 203

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 56/195 (28%), Gaps = 46/195 (23%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            +   +   +R+   +   +        +    +LV+I + +L    N  V       V 
Sbjct: 42  EVERDLSEVVRRNISSFRTLDWRPYFDNLNNGAILVDITSRALHFWNNDGVYKLYPTSVP 101

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             +  T    + + R +  P W    S+ +        ++P++                 
Sbjct: 102 LTEDLTRRGRTSVTRKVEGPEWRPTPSMKE--------RNPEW----------------- 136

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                               G  N + +  +    +    +H T +        R  ++G
Sbjct: 137 --------------PDFIPAGPGNPLGTHALYLGWQY-YRIHGTHDTRKIG---RRSSNG 178

Query: 343 CVRV--RNIIDLDVW 355
           C+ +   NI +L   
Sbjct: 179 CIGLYNENIAELFSL 193


>gi|295706189|ref|YP_003599264.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
 gi|294803848|gb|ADF40914.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium DSM 319]
          Length = 346

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--P 153
            LP   L  G+S  +V++L++ L           +   +    + AV+ FQ+ + L    
Sbjct: 270 PLPNGILKQGDSGEAVKQLQKALNAVNF--KVGPVDGIYGVQTKDAVRRFQLVY-LPYDV 326

Query: 154 SGMVDSST 161
            G+    T
Sbjct: 327 DGIYGPQT 334


>gi|228913445|ref|ZP_04077076.1| hypothetical protein bthur0012_6860 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846196|gb|EEM91217.1| hypothetical protein bthur0012_6860 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 219

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           N  +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  NKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|118443521|ref|YP_878230.1| N-acetylmuramoyl-L-alanine amidase [Clostridium novyi NT]
 gi|118133977|gb|ABK61021.1| N-acetylmuramoyl-L-alanine amidase cwlL precursor (Cellwall
           hydrolase) (Autolysin) [Clostridium novyi NT]
          Length = 431

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G      + ++ERLI  G      G   +F +    AV   Q  + L   G+V   T  A
Sbjct: 368 GAKGNITKIIQERLIDKGYSVGKWGADGSFGSGTYDAVVKLQKDNSLSADGIVGKDTWRA 427

Query: 165 M 165
           +
Sbjct: 428 L 428


>gi|13476341|ref|NP_107911.1| hypothetical protein mll7632 [Mesorhizobium loti MAFF303099]
 gi|14027102|dbj|BAB54056.1| mll7632 [Mesorhizobium loti MAFF303099]
          Length = 277

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++    +R             ++V+     L  V  G   +R  V +GR   + 
Sbjct: 71  PAIPFDRIDPQFLRQIVPDPTGQKPGTIIVDTTGHFLYLVRPGGQAIRYGVGLGRAGFE- 129

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + +      P W  P  +I +     L+  P    +  +                 
Sbjct: 130 WSGDAVVQWKQKWPKWTPPDEMIARQ--PELK--PYSADNGGM----------------- 168

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +     + +  Y +H +PE           +SGCVR
Sbjct: 169 ------------PGGLKNPLGARALYLFQGNVDTLYRLHGSPEWKSIGKS---VSSGCVR 213

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   +   TP
Sbjct: 214 LMNQDIIDLYDRVPSKTP 231


>gi|317127871|ref|YP_004094153.1| peptidase S8 and S53 subtilisin kexin sedolisin [Bacillus
            cellulosilyticus DSM 2522]
 gi|315472819|gb|ADU29422.1| peptidase S8 and S53 subtilisin kexin sedolisin [Bacillus
            cellulosilyticus DSM 2522]
          Length = 1027

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 44/144 (30%), Gaps = 8/144 (5%)

Query: 26   LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
            L+   +      + +    +++    F       +       PI  +             
Sbjct: 886  LLSTTMALGTHSQEVVTLKNNLATLGFHI----SNNPTTYYGPITEQVVREFQRYYGLKM 941

Query: 86   QDILSR---GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
              + S+        +   PL  G    S  +L+  L + G    +      +    E  V
Sbjct: 942  TGVASQETLNKIESVLSSPLRNGQHHESAIQLKINLSLLGFHVSNNPT-TYYGPMTERRV 1000

Query: 143  KLFQMRHGLDPSGMVDSSTLEAMN 166
            + FQ  HGL  +G+ D  TL  + 
Sbjct: 1001 REFQSAHGLIVNGIADEITLAKIA 1024



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 22/182 (12%)

Query: 35  VLDEIINES-YHSIVNDRFDNFLARVD--------MGIDSDIPIISKETIAQTEKAIAFY 85
            ++EI++    +   ++        +                P   ++     +      
Sbjct: 812 KIEEILSSPLRNGQHDEGAIQLKINLSLLGFHISNNPTTHYGPTTERKVREFQQVNGLKV 871

Query: 86  QDILSRGGWPELP---IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             I  +     +       + LG  S  V  L+  L   G    +      +    E  V
Sbjct: 872 NGIADKVTLKTIQELLSTTMALGTHSQEVVTLKNNLATLGFHISNNPT-TYYGPITEQVV 930

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR---------QLQVNLMRIKKLLEQKMGL 193
           + FQ  +GL  +G+    TL  +   +   +R         QL++NL  +   +      
Sbjct: 931 REFQRYYGLKMTGVASQETLNKIESVLSSPLRNGQHHESAIQLKINLSLLGFHVSNNPTT 990

Query: 194 RY 195
            Y
Sbjct: 991 YY 992



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 4/108 (3%)

Query: 62  GIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI---RPLHLGNSSVSVQRLRERL 118
                 P   ++     EK       I       ++      P+ LG     V  L+  L
Sbjct: 708 PTTYYGPTTERKVREFQEKYGLRVNGIADEITLKKIESLINSPMALGTYRKDVITLKNNL 767

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            I G    +      +    E  V+ FQ  +GL+ +G+    TLE + 
Sbjct: 768 AILGFHISNNPT-TYYGPTTERVVREFQDYYGLEVTGIASQETLEKIE 814



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 9/92 (9%)

Query: 83  AFYQDILSRG--------GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
             Y  +++ G           E+   PL  G    S  +L+  L    D   S   +  +
Sbjct: 654 QEYYGLVATGMITTDTKVKIQEILSSPLRNGQHHDSAIQLKINLSFL-DFHVSNNPTTYY 712

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               E  V+ FQ ++GL  +G+ D  TL+ + 
Sbjct: 713 GPTTERKVREFQEKYGLRVNGIADEITLKKIE 744



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST---LEAM 165
             + + +E L+  G L  +  ++  F+   E A++ FQ  +GL  +GM+ + T   ++ +
Sbjct: 618 EELIQFQEDLMRLGFL-NNSDVNGEFNIETEVAIRDFQEYYGLVATGMITTDTKVKIQEI 676

Query: 166 NVPV------DLRIRQLQVNLMRIKKLLEQKMGLRY 195
                          QL++NL  +   +       Y
Sbjct: 677 LSSPLRNGQHHDSAIQLKINLSFLDFHVSNNPTTYY 712


>gi|257064653|ref|YP_003144325.1| negative regulator of beta-lactamase expression [Slackia
           heliotrinireducens DSM 20476]
 gi|256792306|gb|ACV22976.1| negative regulator of beta-lactamase expression [Slackia
           heliotrinireducens DSM 20476]
          Length = 248

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
               V++L+  L   G      G S  FDAY E A++ FQ+  GL+P G+    T +
Sbjct: 29  QGQDVEQLQTALGALGF--ACGGASGTFDAYTEGALRKFQLNMGLEPDGIAGLKTYD 83


>gi|170749324|ref|YP_001755584.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170655846|gb|ACB24901.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 316

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 47/251 (18%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V          G + P++GLS   +A    AV        +D + +    T +   V
Sbjct: 95  DPTVPA------RPGSVPPAEGLSPL-EAAKAKAVLRAPDNEPIDYAKVYGPITDDVFPV 147

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                 +++    +R +           ++V+  A  L  VE      R  V VG+    
Sbjct: 148 Q-AFNYKKMNPAFLRQEIAYHGPYEPGTIIVDPRAHQLTLVEANGRARRYGVGVGKQG-F 205

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           +    + +N     P W  P+ +I +     L  +   L+                    
Sbjct: 206 SWSGTATVNSKQAWPDWYPPKEMIARS--PKLASEVDKLQSG------------------ 245

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCV 344
                          G  N + +  +  +  +++  + +H T EP          +SGC+
Sbjct: 246 ----------LGVAGGLRNPLGARAMYLWQGNKDTLFRIHGTLEPFSIGKS---VSSGCI 292

Query: 345 RV--RNIIDLD 353
           R+  ++ IDL 
Sbjct: 293 RMINQDAIDLF 303


>gi|149201932|ref|ZP_01878906.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
 gi|149144980|gb|EDM33009.1| ErfK/YbiS/YcfS/YnhG [Roseovarius sp. TM1035]
          Length = 188

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 26/93 (27%), Gaps = 6/93 (6%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L       I  K                P       PG  N + +  +         +H 
Sbjct: 91  LTRRGYTQIVRKRVGPDWTPTQSMRERDPTLPAYMPPGPGNPLGTHALYLSWP-AYLVHG 149

Query: 326 TPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           T +        R  +SGC+ + N  I +L   +
Sbjct: 150 THDTRKIG---RQSSSGCIGLYNEHIEELFAKV 179


>gi|296444850|ref|ZP_06886812.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296257518|gb|EFH04583.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 190

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     ++      Y+V+ R+   +  + + R+     +   +  I  K +       + 
Sbjct: 58  PRGSVVVSTKERRLYYVVSRNRAVEYGVGVGREG---FEWAGVKTITAKREWPDWRPPEA 114

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                P+     + G  N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 115 MLKRRPDLPRHMEGGMDNPLGARAMYLGSSQ-YRIHGSNEPDTMGA---AVSSGCIRMTN 170

Query: 349 II 350
             
Sbjct: 171 AD 172


>gi|228906509|ref|ZP_04070385.1| hypothetical protein bthur0013_6860 [Bacillus thuringiensis IBL
           200]
 gi|228853058|gb|EEM97836.1| hypothetical protein bthur0013_6860 [Bacillus thuringiensis IBL
           200]
          Length = 253

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|225377726|ref|ZP_03754947.1| hypothetical protein ROSEINA2194_03377 [Roseburia inulinivorans DSM
           16841]
 gi|225210403|gb|EEG92757.1| hypothetical protein ROSEINA2194_03377 [Roseburia inulinivorans DSM
           16841]
          Length = 425

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 6/72 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLI-ISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP      L +G +   V++++E+L  IS      P+      +     +AV+ FQ   G
Sbjct: 340 WPR---YNLEVGAAGDKVRQIQEQLARISQAYPAIPTITPDGIYGEATRAAVEKFQSIFG 396

Query: 151 LDPSGMVDSSTL 162
           L  +G+VD  T 
Sbjct: 397 LPVTGVVDYRTW 408


>gi|254473464|ref|ZP_05086861.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
 gi|211957580|gb|EEA92783.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
          Length = 226

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 48/161 (29%), Gaps = 45/161 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  V      +R  V VGR         + I      P W  P  +I +           
Sbjct: 90  LYLVRGDGTAMRYGVGVGRAG-FGWNGDAVIQYKRQWPKWTPPAEMIAR----------- 137

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY 322
                                     PE   F +   PG  N + +  +      ++  Y
Sbjct: 138 -------------------------QPELEEFRYGMAPGIENPLGARALYLFQNGKDTLY 172

Query: 323 -MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            +H T E           +SGC+R+  +++IDL   +   +
Sbjct: 173 RLHGTNEHWSIGKN---VSSGCIRLLNQDVIDLYNRVPNGS 210


>gi|163815210|ref|ZP_02206587.1| hypothetical protein COPEUT_01368 [Coprococcus eutactus ATCC 27759]
 gi|158449405|gb|EDP26400.1| hypothetical protein COPEUT_01368 [Coprococcus eutactus ATCC 27759]
          Length = 410

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V +L+ +L  I        S  +   +  +   AVK FQ    L  +
Sbjct: 326 PGYDLTIGSSGDKVFQLQRQLARIALNYPAIGSIAVDGVYGQHTADAVKNFQQIFNLPAT 385

Query: 155 GMVDSSTLEAMNV 167
           G+ D  T   ++ 
Sbjct: 386 GVTDYKTWYKISQ 398


>gi|331090375|ref|ZP_08339256.1| hypothetical protein HMPREF1025_02839 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|330401122|gb|EGG80715.1| hypothetical protein HMPREF1025_02839 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 438

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G             + +    +V+ FQ    L  +
Sbjct: 354 PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 413

Query: 155 GMVDSSTLEAMN 166
           G VD ST   ++
Sbjct: 414 GKVDYSTWYKIS 425


>gi|229175729|ref|ZP_04303235.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus MM3]
 gi|228607680|gb|EEK64996.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus MM3]
          Length = 153

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 38/167 (22%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +VN     ++  +NG+     TV  G+    TP    +I   + N  +     I   D  
Sbjct: 32  IVNTQLNKMDYYQNGQFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD-- 88

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                                                            N +    +   
Sbjct: 89  -----------------------------------------------PRNPLGDRWLGLN 101

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 102 MAGTYGTTYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|190891261|ref|YP_001977803.1| hypothetical protein RHECIAT_CH0001648 [Rhizobium etli CIAT 652]
 gi|190696540|gb|ACE90625.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 203

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 45/176 (25%), Gaps = 46/176 (26%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
              +     +++     +L             + VGR  +Q     +R+     +P W  
Sbjct: 66  PSTRSARGNIVIATREHTLIYTTASGEQFAYPIAVGREGKQ-WYGSTRVVSKRMHPEWRP 124

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             S+ QK                                        P        G  N
Sbjct: 125 TASMRQK---------------------------------------NPRLPAVVKAGPAN 145

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            + +  I         +H T +P          +SGC R+   ++ +L   +   T
Sbjct: 146 PLGTRAIYLADG-LLRIHGTNDPSSIGTN---ASSGCFRMYREDVEELYDMVQPGT 197


>gi|42779896|ref|NP_977143.1| hypothetical protein BCE_0819 [Bacillus cereus ATCC 10987]
 gi|42735813|gb|AAS39751.1| conserved domain protein [Bacillus cereus ATCC 10987]
          Length = 253

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 40/156 (25%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   ENG       V  GR    TP  +  I                 
Sbjct: 23  DHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKF------------- 69

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                   ++ +Y   +   +                                N + +  
Sbjct: 70  --------KNKEY---HRKKIAGGA--------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +N   +H T       +     ++GC+R+ +
Sbjct: 93  LGL-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|324324794|gb|ADY20054.1| hypothetical protein YBT020_04040 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 253

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 40/156 (25%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   ENG       V  GR    TP  +  I                 
Sbjct: 23  DHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKF------------- 69

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                   ++ +Y   +   +                                N + +  
Sbjct: 70  --------KNKEY---HRKKIAGGA--------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +N   +H T       +     ++GC+R+ +
Sbjct: 93  LGL-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|241206998|ref|YP_002978094.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860888|gb|ACS58555.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 227

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 45/198 (22%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +A      + I +++    R     +       ++VN     L  +      +R  + 
Sbjct: 52  TKDAGYSLPAIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIG 111

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+         + +      P W  P+ +  +     L +          ++ D  G  
Sbjct: 112 VGKQGFA-WAGTAYVAWKQEWPNWHPPKEMAVRR--PDLAK----------YVEDGMG-- 156

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVV 336
                                PG  N + +  +  ++ +       +H TPE        
Sbjct: 157 ---------------------PGLTNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGT-- 193

Query: 337 RFETSGCVRV--RNIIDL 352
              +SGC+R+  +++IDL
Sbjct: 194 -AASSGCIRLMNQDVIDL 210


>gi|163852311|ref|YP_001640354.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|218531069|ref|YP_002421885.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240139647|ref|YP_002964123.1| hypothetical protein MexAM1_META1p3099 [Methylobacterium extorquens
           AM1]
 gi|163663916|gb|ABY31283.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|218523372|gb|ACK83957.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240009620|gb|ACS40846.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens AM1]
          Length = 225

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 49/195 (25%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
            +VP+  R R +     R +           ++V+I    L  V+ G   L+  V VG+ 
Sbjct: 57  FDVPLVDRSR-IDPKYRRQEVAYSGPEAPGTIVVDIDKRHLALVQEGGTALQYGVGVGKA 115

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                    + +             I +K +                             
Sbjct: 116 G-----FSWKGD-----------ARIGRKGVWP------------------------DWS 135

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETS 341
                    P     +  G  N + +  +     +R+  + +H T EP      +   +S
Sbjct: 136 PTTTMVSLNPGIERSRKGGIDNPLGARALYLYQGNRDTMFRIHGTNEPWSIGEQM---SS 192

Query: 342 GCVRV--RNIIDLDV 354
           GCVR+   +I+DL  
Sbjct: 193 GCVRMLNEDIVDLFE 207


>gi|325171175|ref|YP_004251150.1| putative Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1]
 gi|323512570|gb|ADX88025.1| putative Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1]
 gi|323512797|gb|ADX88251.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_D]
 gi|323513025|gb|ADX88478.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_C]
 gi|323513250|gb|ADX88702.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_B]
 gi|323513477|gb|ADX88928.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2006_A]
 gi|323513708|gb|ADX89158.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2005_A]
 gi|323513939|gb|ADX89388.1| Gp5 baseplate hub subunit and tail lysozyme (Shigella phage
           phiSboM-AG3) [Vibrio phage ICP1_2001_A]
 gi|323514167|gb|ADX89615.1| Gp5 baseplate hub subunit and tail lysozyme [Vibrio phage
           ICP1_2004_A]
          Length = 238

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G+S   V+ ++E L   G    +KG+   F+   ESAVK FQ         G++ + 
Sbjct: 3   LKRGSSGADVKNMQEYLTALGY--DTKGVEGTFEGGTESAVKAFQKDMSFTVVDGIIGNQ 60

Query: 161 TLE 163
           T +
Sbjct: 61  TAK 63


>gi|317502111|ref|ZP_07960292.1| spore cortex-lytic enzyme SleC [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316896500|gb|EFV18590.1| spore cortex-lytic enzyme SleC [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 438

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V++++E+L +I+G             + +    +V+ FQ    L  +
Sbjct: 354 PGYVLEIGSSGEKVRQIQEQLNVIAGAYPAIPKITADGIYGSKTAESVRKFQEVFQLPQT 413

Query: 155 GMVDSSTLEAMN 166
           G VD ST   ++
Sbjct: 414 GKVDYSTWYKIS 425


>gi|288554111|ref|YP_003426046.1| carboxy-terminal processing protease [Bacillus pseudofirmus OF4]
 gi|288545271|gb|ADC49154.1| carboxy-terminal processing protease [Bacillus pseudofirmus OF4]
          Length = 487

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L L   +  ++  +  L   G           +D   E AV+ FQ   GL  +
Sbjct: 390 PLTGDETLTLDMMNEQIRSAQTMLKGLGH--EPGRTDGYYDEQTEQAVRAFQKAQGLSET 447

Query: 155 GMVDSSTLEAMNV 167
           G +D  T  A+  
Sbjct: 448 GDIDEETAGALQQ 460


>gi|228944497|ref|ZP_04106868.1| hypothetical protein bthur0007_6690 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228815165|gb|EEM61415.1| hypothetical protein bthur0007_6690 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 226

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           N  +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 40  NKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 95

Query: 347 RN 348
            +
Sbjct: 96  HD 97


>gi|225453480|ref|XP_002274477.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297734565|emb|CBI16616.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    +  L++     G L      ++  FD  +ESAV  +Q + GL  +G +DS T
Sbjct: 55  RRGSRISGMAELKKYFNRFGYLGFQDGNVTDVFDTRLESAVAAYQAKLGLPVTGRLDSET 114

Query: 162 LEAMNVP 168
           L  M  P
Sbjct: 115 LSQMMSP 121


>gi|209966451|ref|YP_002299366.1| hypothetical protein RC1_3190 [Rhodospirillum centenum SW]
 gi|209959917|gb|ACJ00554.1| hypothetical protein RC1_3190 [Rhodospirillum centenum SW]
          Length = 385

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 8/74 (10%)

Query: 105 GNSSVS------VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+S         V  ++ RL   G   P            E+A++ FQ    L   G   
Sbjct: 313 GDSGPRPLDRAGVAEVQRRLKALGY--PMGRADGLTGPRTEAAIRAFQKDRRLTVDGRAT 370

Query: 159 SSTLEAMNVPVDLR 172
           ++ LE +      R
Sbjct: 371 AALLEQIRAADGTR 384


>gi|28373183|ref|NP_783826.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium tetani
           E88]
 gi|28208767|gb|AAO37449.1|AF528097_55 putative N-acetylmuramoyl-L-alanine amidase [Clostridium tetani
           E88]
          Length = 227

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +V+ ++E+L+  G    S G          +A+K FQ  +G+   G+V   T 
Sbjct: 167 KDNNVRIIQEKLMEKGYNVGSYGADGYLGGTTLNAIKSFQRDNGILVDGIVGRDTW 222


>gi|196037419|ref|ZP_03104730.1| conserved domain protein [Bacillus cereus NVH0597-99]
 gi|196031661|gb|EDX70257.1| conserved domain protein [Bacillus cereus NVH0597-99]
          Length = 253

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/92 (10%), Positives = 30/92 (32%), Gaps = 10/92 (10%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIEFY 316
           ++  Y       +   + +    E         +   +  ++  G    N + +  +   
Sbjct: 39  ENGNYA--KTFPVTTGRDRTPTPEGNFCIITKYKNKEYHRKKIAGGAPNNPLGTRWLGL- 95

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +N   +H T       +     ++GC+R+ +
Sbjct: 96  DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|290962512|ref|YP_003493694.1| hypothetical protein SCAB_82141 [Streptomyces scabiei 87.22]
 gi|260652038|emb|CBG75170.1| putative membrane protein [Streptomyces scabiei 87.22]
          Length = 299

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L LG+    V  L+ RL   G  +        +D  V+SAV+ +Q+   L     G+  
Sbjct: 226 VLGLGDRGAEVTELQLRLNEVGFYNGDA--DGEYDREVQSAVRGYQLTRVLLEDESGVYG 283

Query: 159 SSTLEAMNVPVDLR 172
            +T  ++       
Sbjct: 284 EATRASLESETAEP 297


>gi|290954841|ref|YP_003486023.1| peptidoglycan-binding surface protein [Streptomyces scabiei 87.22]
 gi|260644367|emb|CBG67452.1| putative peptidoglycan-binding surface protein [Streptomyces
           scabiei 87.22]
          Length = 275

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            KG+  +F    ++AV+ FQ   GL+  G+V   T   +  P
Sbjct: 232 PKGIDASFGPNTKAAVQRFQRSRGLEDDGIVGPMTWRELRKP 273


>gi|88812001|ref|ZP_01127254.1| hypothetical protein NB231_06411 [Nitrococcus mobilis Nb-231]
 gi|88790885|gb|EAR21999.1| hypothetical protein NB231_06411 [Nitrococcus mobilis Nb-231]
          Length = 1063

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 8/70 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISG--------DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           PL  G    +V+ +++ L+  G        +L P       F   +   VK FQ R+ L 
Sbjct: 370 PLRRGAKGDAVKLVQQALLQWGCDFSSESVNLLPRYRDDGGFGLEMYLGVKEFQERNRLG 429

Query: 153 PSGMVDSSTL 162
             G+V + TL
Sbjct: 430 NDGVVGTETL 439


>gi|205375088|ref|ZP_03227879.1| carboxyl-terminal protease [Bacillus coahuilensis m4-4]
          Length = 156

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    ++  V+  +E L   G           +      AVK FQ + GL  +G +DS
Sbjct: 65  KTLTKEMNNDQVKSAQEMLYSLGY--GPGRTDGYYSNQTAIAVKAFQSKAGLTSTGNIDS 122

Query: 160 STLEAMNVPVDLRIRQ 175
            T  A+   +   I +
Sbjct: 123 QTASALEKTIMKEIEK 138


>gi|254411200|ref|ZP_05024977.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181701|gb|EDX76688.1| Putative peptidoglycan binding domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 282

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG----DLDPS--KG 129
           A T+ A+  +Q I+          +   + N  +++  LRE    +G     L       
Sbjct: 185 ADTKAALKTFQAIVGVTPTGTADAKTWQIINQILAMPVLREN-HATGFVVKYLQRRIGAT 243

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               + +    AVK FQ + G+   G++ + +   +   
Sbjct: 244 PDGIYGSGTAGAVKRFQQQQGITADGIIGAQSWSKILAD 282


>gi|321311605|ref|YP_004203892.1| carboxy-terminal processing protease [Bacillus subtilis BSn5]
 gi|320017879|gb|ADV92865.1| carboxy-terminal processing protease [Bacillus subtilis BSn5]
          Length = 466

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++  +V+  ++ L   G       ++  +D    S VK FQ +  L+ +G++
Sbjct: 376 ADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSTYDQDFVSVVKQFQKKEKLNETGIL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T   + + +  ++      + +
Sbjct: 433 TGDTTTKLMIELQKKLSDNDTQMEK 457


>gi|304393363|ref|ZP_07375291.1| lipoprotein [Ahrensia sp. R2A130]
 gi|303294370|gb|EFL88742.1| lipoprotein [Ahrensia sp. R2A130]
          Length = 238

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 88/257 (34%), Gaps = 36/257 (14%)

Query: 113 RLRER--LIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE-AMNVP 168
            +R R  L ++G  L  S   S  FD    S +           +G + +  +  A+ V 
Sbjct: 4   AIRRREFLAVAGAGLLVSGCNSSNFDTMTTSGIDRM-------STGSIGAHQIRPAIGVD 56

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
            +LR                   G  Y  +      L AV + K+  R            
Sbjct: 57  ANLRSA-----------------GKMYGEIRDGEHLLAAVPHDKMDPRFRRQRVVNKTGM 99

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     ++    + ++V+      +  + + +   ++  D  I    +  +     E+  
Sbjct: 100 PPGTIVVSPHQHHAWYVLSNDEAVRYGVGVGKAGFEWQGDAVIARKAQWPRWTPPAEMIQ 159

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
             P+   F   Q+ G  N + +  +      R+  Y +H TPE       +   +SGC+R
Sbjct: 160 RRPDLVKFAGGQEGGIDNPLGARALYLFADGRDTLYRLHGTPEWDSIGKSM---SSGCIR 216

Query: 346 V--RNIIDLDVWLLKDT 360
              ++IIDL   +   T
Sbjct: 217 FLNQDIIDLYNRVPNGT 233


>gi|294629109|ref|ZP_06707669.1| peptidodoglycan-binding membrane protein [Streptomyces sp. e14]
 gi|292832442|gb|EFF90791.1| peptidodoglycan-binding membrane protein [Streptomyces sp. e14]
          Length = 184

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 90  SRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           +  G P  P R    L  G+    V  L+ RL        +  ++  +D  VE +V+++Q
Sbjct: 102 ATTGKPSAPARLGPVLQRGDHGPEVAELQSRLAEL--YLYTGPVNGDYDRRVEDSVRVYQ 159

Query: 147 MRHGLDPS--GMVDSSTLEAMN 166
              G      G+   +T  ++ 
Sbjct: 160 WSRGTTSDGLGVYGPATRASLE 181


>gi|227818950|ref|YP_002822921.1| hypothetical protein NGR_b07100 [Sinorhizobium fredii NGR234]
 gi|227337949|gb|ACP22168.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 238

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  +++     R             ++V++    L  V+     LR  V +GR   + 
Sbjct: 64  PAVPYQKIDPRFHRQVVADPTGDPPGTLVVDVGNHFLYLVQVKGQALRYGVALGRAGFE- 122

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 +      P W+    +++++    L++    L+   +                 
Sbjct: 123 WSGRGVVQYKRKWPRWIPADEMLERE--PKLKK--YSLERGGME---------------- 162

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  F +  +  Y +H +PE           +SGCVR
Sbjct: 163 -------------PGPDNPLGARALYIFQNGEDTLYRVHGSPEWWTIGQ---HVSSGCVR 206

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +   TP
Sbjct: 207 MINQDVIDLYDRVADGTP 224


>gi|163839614|ref|YP_001624019.1| cell wall hydrolase [Renibacterium salmoninarum ATCC 33209]
 gi|162953090|gb|ABY22605.1| cell wall hydrolase [Renibacterium salmoninarum ATCC 33209]
          Length = 196

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G +S  V RL++ L  +G     + +   F     +AVK +Q  HGL   G+V  +T
Sbjct: 85  IEKGQNSGCVTRLQQLLNNNG---AKRTVDGGFGDGTFTAVKSYQSAHGLSADGIVGPNT 141

Query: 162 LEAMNVPVDL 171
             A+      
Sbjct: 142 KGALEGGPAP 151


>gi|147768133|emb|CAN60606.1| hypothetical protein VITISV_020065 [Vitis vinifera]
          Length = 260

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 9/92 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G +     S+  S  F+  +ES++K FQ  + L+ +G +D+
Sbjct: 52  KKGDKREGIQKVKQYLQRYGYISSTHYSQMGSDDFNDALESSLKAFQTFYHLNSTGTLDA 111

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           +T   M+ P      +    L  +  L  ++ 
Sbjct: 112 ATATLMSRP------RYAYPLHSVPWLPPEQP 137


>gi|319400781|gb|EFV89000.1| C-terminal processing peptidase family protein [Staphylococcus
           epidermidis FRI909]
          Length = 491

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G        +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--QIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|315179130|gb|ADT86044.1| general secretion pathway protein A [Vibrio furnissii NCTC 11218]
          Length = 530

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            + I        R  W     + L  G    +V  L  +L     L   +     +D  V
Sbjct: 431 REWIEPLWQGEYRVVWQPSFYQTLRSGMRGEAVTLLDVKLSRL--LGEPERHVTEYDQEV 488

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  V++FQ    +   G+    TL  ++
Sbjct: 489 KRKVEIFQRWQHMQVDGIAGRQTLRQLD 516


>gi|308173220|ref|YP_003919925.1| N-acetylmuramoyl-L-alanine amidase [Bacillus amyloliquefaciens DSM
           7]
 gi|307606084|emb|CBI42455.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens DSM 7]
 gi|328553860|gb|AEB24352.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens TA208]
 gi|328911284|gb|AEB62880.1| N-acetylmuramoyl-L-alanine amidase; bacteriophage PBSX protein
           [Bacillus amyloliquefaciens LL3]
          Length = 317

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +          +V++++  L            + G    +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTKPLTKGTNVKQVQTALSALYFYPDKGAKNHGADGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   G+    T   + 
Sbjct: 297 SGLTADGIYGPKTKAKIE 314


>gi|282897482|ref|ZP_06305483.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
 gi|281197577|gb|EFA72472.1| Peptidoglycan-binding domain protein 1 [Raphidiopsis brookii D9]
          Length = 319

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 23/56 (41%), Gaps = 8/56 (14%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           S   ++ L+ R                +    E+A+K +Q ++GL   G++  +T 
Sbjct: 267 SGPIMRYLQYR--------VGTTPDGIYGRQTEAAIKRYQQQNGLTADGIIGPATW 314



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 14/101 (13%)

Query: 89  LSRGGWPELPIRPLHL-----GNSSV------SVQRLRERLIISGDLDPSK---GLSVAF 134
           + +G   +LP  P+       G+         S+ RL++ L      D +          
Sbjct: 162 IVKGLTGKLPTTPVKPVEDVTGDQDTKENKDTSILRLQKALNQLKITDRNNRPLTEDNFT 221

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                SAV+ FQ   G+ P+GM   +T +A+N  +  R  Q
Sbjct: 222 GPATSSAVEKFQRVVGIIPTGMATQTTWDAINQILAKRTVQ 262


>gi|242242707|ref|ZP_04797152.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           W23144]
 gi|242233843|gb|EES36155.1| S41A family carboxy-terminal peptidase [Staphylococcus epidermidis
           W23144]
          Length = 491

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  H G    +V+ ++  L   G        +  FD  +ESA+K FQ  + L  +G  D 
Sbjct: 405 KTYHQGEKDKNVKTMKIGLKALGY--QIDNETNIFDEQLESAIKTFQQDNNLKVNGNFDK 462

Query: 160 ST 161
            T
Sbjct: 463 KT 464


>gi|229073419|ref|ZP_04206555.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
           F65185]
 gi|228709726|gb|EEL61764.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus cereus
           F65185]
          Length = 335

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPSGM 156
           P +P+  G+   +++ ++  L +         +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKRGDRGRNIEAIQRTLRV--------SVDGIFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|167622957|ref|YP_001673251.1| peptidoglycan-binding domain-containing protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167352979|gb|ABZ75592.1| Peptidoglycan-binding domain 1 protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 537

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G S+    +Q L   L    D  P       FD  +E  +K FQ +HGL
Sbjct: 448 WQAPQHQPKEIGQSANQAQIQWLENSLARITDTPPRLVSH--FDPQLEQKLKAFQRQHGL 505

Query: 152 DPSGMVDSSTLEAMNV---PVDLRIRQ 175
              G+  + TL  +N+       R+ Q
Sbjct: 506 IADGIAGTQTLVQLNLYLSDAGPRLGQ 532


>gi|13474192|ref|NP_105760.1| hypothetical protein mll5027 [Mesorhizobium loti MAFF303099]
 gi|14024944|dbj|BAB51546.1| mll5027 [Mesorhizobium loti MAFF303099]
          Length = 255

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 22/216 (10%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           L+    V        +VP       +  N+     +        + +  +P   L+    
Sbjct: 53  LELDNTVT------GSVPPMRPAISVDKNITSPDLMYAALTDNGFNVPEVP--YLKVKPE 104

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
            +  +               L  R+  ++       P     +  + + +   ++    N
Sbjct: 105 FRRQIVVDTTGEAPGTIVVHLKERMLYLV------QPGGDAIRYGVGIGKDGFRWSGRAN 158

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTP 327
           I    E        E+    PE   +   Q  G  N + +  +  Y         +H +P
Sbjct: 159 IQYGREWPTWTPPPEMIQRKPELVKWQGGQPGGLTNPLGARALYIYQDGKDTGYRIHGSP 218

Query: 328 EPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           E       +   +SGCVR+  ++IIDL   + K  P
Sbjct: 219 EWWSIGQAM---SSGCVRLINQDIIDLYSRVSKKNP 251


>gi|228925934|ref|ZP_04089015.1| hypothetical protein bthur0010_6570 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228932178|ref|ZP_04095064.1| hypothetical protein bthur0009_6580 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827474|gb|EEM73222.1| hypothetical protein bthur0009_6580 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228833646|gb|EEM79202.1| hypothetical protein bthur0010_6570 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 219

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
           N  +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  NKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|110634368|ref|YP_674576.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mesorhizobium sp. BNC1]
 gi|110285352|gb|ABG63411.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Chelativorans sp. BNC1]
          Length = 251

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 20/153 (13%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
            +    I   +++      Y    + + D   A        +  I+ +  +A ++ A   
Sbjct: 90  DVNSFSIGVEIVNPGHQFGYRDFPSVQIDAVAALCLDICRRNA-ILPQRVLAHSDTAPGR 148

Query: 85  YQDILSRGGWPELP---------------IRPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
             D   +  W  L                   L  G+   +V  L+ RL   G       
Sbjct: 149 KVDPGEKFPWKRLAEMGVGHYVDPERVTGGEVLAPGDRGSAVAGLQRRLAEYGY---GIE 205

Query: 130 LSVAFDAYVESAVKLFQMRHG-LDPSGMVDSST 161
            +  FDA  E+ V  FQ        +G+ DSST
Sbjct: 206 KTGVFDAETETVVAAFQRHFRPSAVNGIADSST 238


>gi|291483763|dbj|BAI84838.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 317

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +           V++++  L            + G+   +     +AVK FQ  
Sbjct: 237 PLPSGVIKVTSPLTKGTKVKQVQTALAALYFYPDKGAKNHGVDGVYGPKTANAVKRFQSV 296

Query: 149 HGLDPSGMVDSSTLEAMN 166
            GL   G+    T   + 
Sbjct: 297 SGLTADGIYGPKTKAKLE 314


>gi|254562058|ref|YP_003069153.1| hypothetical protein METDI3663 [Methylobacterium extorquens DM4]
 gi|254269336|emb|CAX25302.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 224

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 60/207 (28%), Gaps = 57/207 (27%)

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           P    D   ++   +    R +++  N                ++V+I    L  V+ G 
Sbjct: 52  PDKPFDVPLVDRSRIDPKYRRQEVAYNGSEAPGT---------IVVDIDKRHLALVQEGG 102

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
             L+  V VG+          + +             I +K +                 
Sbjct: 103 TALQYGVGVGKAG-----FSWKGD-----------ARIGRKGVWP--------------- 131

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEP 329
                                P     +  G  N + +  +     +R+  + +H T EP
Sbjct: 132 ---------DWSPTTTMVSLNPGIERSRKGGIDNPLGARALYLYQGNRDTMFRIHGTNEP 182

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDV 354
                 +   +SGCVR+   +I+DL  
Sbjct: 183 WSIGEQM---SSGCVRMLNEDIVDLFE 206


>gi|241113056|ref|YP_002972891.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861264|gb|ACS58930.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 224

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 47/187 (25%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 81  LYVIMENKTAIRYGVGVGREGFK-WFGRATIDSKSLWPRWTPPPEMRKRH---------- 129

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 130 ----------------------------PELPEFVAGGSPKNPLGPRAMYLHRDGVDTGY 161

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
             H T EP          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +
Sbjct: 162 RFHGTLEPWSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIADQAESAAQ 216

Query: 382 LATEVPV 388
           ++   PV
Sbjct: 217 VSQTTPV 223


>gi|116873286|ref|YP_850067.1| carboxy-terminal processing protease [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116742164|emb|CAK21288.1| carboxy-terminal processing protease [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 496

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   E AV+ FQ  + LD +G++
Sbjct: 408 STKVYKNGDFGDDVKTIETLLRALDY--NVGKVDGLYDTDTEYAVQRFQSANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|220932697|ref|YP_002509605.1| YD repeat protein [Halothermothrix orenii H 168]
 gi|219994007|gb|ACL70610.1| YD repeat protein [Halothermothrix orenii H 168]
          Length = 2277

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 106  NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                 V++++  L   G       +          AV+ +Q   GL   G+V  +T E +
Sbjct: 2178 MRGDDVEQVQTFLNQQGY---DVTVDGILGPETAGAVRDYQEDKGLSVDGVVGPNTREEI 2234

Query: 166  NVP 168
               
Sbjct: 2235 KKD 2237


>gi|319779941|ref|YP_004139417.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165829|gb|ADV09367.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 205

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 45/197 (22%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
           +A      + I ++ +   R +   +       ++V+     L  +E     +R  + VG
Sbjct: 38  DAGYQLPRIPIEKVPMKYHRQEVNYDSPEKPGTIIVDTQNKFLYFIEGDGRAIRYGIGVG 97

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R   +     + I      P W  PR +IQ+     L +         +           
Sbjct: 98  REGFE-WHGTAHIALKREWPTWTPPRQMIQRQ--PELEK-----FAGGME---------- 139

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR---NNTYMHDTPEPILFNNVVRFE 339
                              PG  N + +  +  +++   +   +H +PE       +   
Sbjct: 140 -------------------PGLKNPLGARAMYLFNKGGDSGYRLHGSPEWNSIGKAM--- 177

Query: 340 TSGCVRV--RNIIDLDV 354
           +SGC+R+  ++IIDL  
Sbjct: 178 SSGCIRLMNQDIIDLYD 194


>gi|225627072|ref|ZP_03785110.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237815029|ref|ZP_04594027.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|225617907|gb|EEH14951.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237789866|gb|EEP64076.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 293

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 129 PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 187

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 188 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 219

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 220 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 271

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 272 FLNQDIIDLYDRVPAKTP 289


>gi|224092310|ref|XP_002309553.1| predicted protein [Populus trichocarpa]
 gi|222855529|gb|EEE93076.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             G+    V +L++     G L        +     FD  +E A+K +Q+   L P+G++
Sbjct: 46  KKGDKVEGVDQLKKFFHHFGYLTHGGLNNDEVDDDYFDETIERALKTYQINFNLKPTGVL 105

Query: 158 DSSTLEAMNVP 168
           D+ T+  M  P
Sbjct: 106 DAETVSLMMKP 116


>gi|126729691|ref|ZP_01745504.1| hypothetical protein SSE37_04435 [Sagittula stellata E-37]
 gi|126709810|gb|EBA08863.1| hypothetical protein SSE37_04435 [Sagittula stellata E-37]
          Length = 272

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 34/200 (17%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L  ++ L  +    R +     +  +   +NG             +++         +++
Sbjct: 49  LAEVEVLPPEPPRKRPLRPATRSMYMSTQDNGMTIPAVPEKYLSEEKK--------RQLV 100

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE------KGKEVFVEEVDWNSPEP 293
                    +II   +   L       +     +         +G+     + DW +  P
Sbjct: 101 DYYAPYPAGTIIVDPVATKLYHIQGNDRAMQYTVAVGAAGRAFQGEAKVAYQRDWPTWTP 160

Query: 294 PNFIFRQDP------------GKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRF 338
              + R++P            G  N + +  +      ++  Y +H T  P    +    
Sbjct: 161 TQNMIRREPEVYNQFKDGMEGGLDNPLGARALYLYRNGKDTLYRIHGTRSPASIGH---A 217

Query: 339 ETSGCVRV--RNIIDLDVWL 356
            +SGC+R+  ++II L   +
Sbjct: 218 VSSGCIRLFNQDIIHLAEQV 237


>gi|298291397|ref|YP_003693336.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296927908|gb|ADH88717.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 233

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 49/219 (22%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK--KLLEQKMGLRYVLVNIPAASLEAVE 209
            P+G          +      +   ++N + ++             ++++     L  V 
Sbjct: 44  APTGTYGPM----ADRFPIAEVDTSRINPVYLRREVPYSTSQPPGTIIIDPREHFLYYVM 99

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII--QKDMMALLRQDPQYLK 267
            G V +R  V VG+         + IN     P W  P+ +I  + D+   L +      
Sbjct: 100 PGGVAMRYGVGVGKEG-FGWSGSATINSKQEWPDWYPPKEMIDRRPDIKPQLTK------ 152

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MH 324
                +   +G                        G  N + +  +  +   ++  Y +H
Sbjct: 153 -----LQSGQG---------------------VAGGLQNPLGARAMYLWQNGKDTLYRIH 186

Query: 325 DTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            T EP          +SGC+R+  ++ IDL   +   T 
Sbjct: 187 GTLEPYTIGTN---VSSGCIRMINQDAIDLYNRVAVGTK 222


>gi|227506196|ref|ZP_03936245.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium striatum ATCC
           6940]
 gi|227197220|gb|EEI77268.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium striatum ATCC
           6940]
          Length = 393

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 12/80 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQM 147
           R LH+G+ SV V   R  L   G +                     FDA +   +K FQ 
Sbjct: 3   RVLHIGDQSVRVAEARATLARLGLMKDYQGTLSDWKQQKYSESDKIFDAELSEVIKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
             G+ PSG++D  TL  +  
Sbjct: 63  SRGIVPSGVIDDLTLRELRQ 82



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 45/136 (33%), Gaps = 10/136 (7%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRG 92
              L +   + Y    +  FD  L+ V         I+    I      +   +      
Sbjct: 31  QGTLSDWKQQKYSES-DKIFDAELSEVIKAFQQSRGIVPSGVIDDL--TLRELRQASYTL 87

Query: 93  GWPELPIRPLHLG--NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           G   L       G       V +L+++L   G       +   F     +A+  +Q+ +G
Sbjct: 88  GARVLA---YEPGNVQVGDDVAQLQQQLQELGFYQQR--VDGHFGPDTHAALAEYQLNYG 142

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G+   +T+ A++
Sbjct: 143 LQNDGVCGPTTINALS 158


>gi|218529555|ref|YP_002420371.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218521858|gb|ACK82443.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 232

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 19/58 (32%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+  
Sbjct: 2   DVAAIQRALLARGYDLGKSGADGDAGPRTIAAVTAFQRSAGLVADGIAGPKTQAALQK 59


>gi|163849754|ref|YP_001637797.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163661359|gb|ABY28726.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 305

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 39/180 (21%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +R +           ++V+  A  L  V       R  V VG+    +    + +N   
Sbjct: 148 FLRQEVDFRTNEAPGTIVVDPKAHFLYLVLPNGRARRYGVGVGKQG-FSWSGSATVNSKQ 206

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P+ +I +     L ++   L+                                
Sbjct: 207 AWPDWYPPKEMIARR--PDLAREVDKLQSG----------------------------LG 236

Query: 300 QDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G  N + +  +  +  +++  + +H T EP          +SGC+R+  ++ IDL  
Sbjct: 237 VPGGSRNPLGARAMYLWQNNKDTLFRIHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 293


>gi|157960800|ref|YP_001500834.1| peptidoglycan-binding domain-containing protein [Shewanella
           pealeana ATCC 700345]
 gi|157845800|gb|ABV86299.1| Peptidoglycan-binding domain 1 protein [Shewanella pealeana ATCC
           700345]
          Length = 558

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G S+    +Q L   L    D  P       FD+ +E  +K FQ +HGL
Sbjct: 469 WQAPQNQPKEIGQSANQAQIQWLENSLARINDRAPRLV--DYFDSELEQQLKAFQRQHGL 526

Query: 152 DPSGMVDSSTLEAMNV---PVDLRIRQ 175
              G+  + TL  +N+       R+ Q
Sbjct: 527 SADGIAGTQTLIQLNLYLSDAGPRLGQ 553


>gi|56695003|ref|YP_165349.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
 gi|56676740|gb|AAV93406.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Ruegeria
           pomeroyi DSS-3]
          Length = 208

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 45/182 (24%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLR-YVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDR 226
            +  +R+   +   +             +LV+  + +L    E+  V       V   D 
Sbjct: 51  PEAPVRRNTSSFRALDWRPYFSNTRNGAILVDTVSRALHYWSEDQSVYRLFPSSVPLTDE 110

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            T    + + R +  P W    S+         +++P++                     
Sbjct: 111 LTRRGRTSVIRKVVGPSWAPTPSMK--------KRNPEW--------------------- 141

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                          PG  N + +  +    +    +H T +        R  ++GC+ +
Sbjct: 142 ----------PDYIPPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RRSSNGCIGL 187

Query: 347 RN 348
            N
Sbjct: 188 YN 189


>gi|229074464|ref|ZP_04207493.1| hypothetical protein bcere0024_6530 [Bacillus cereus Rock4-18]
 gi|229106347|ref|ZP_04236790.1| hypothetical protein bcere0019_53120 [Bacillus cereus Rock3-28]
 gi|228677067|gb|EEL31501.1| hypothetical protein bcere0019_53120 [Bacillus cereus Rock3-28]
 gi|228708584|gb|EEL60728.1| hypothetical protein bcere0024_6530 [Bacillus cereus Rock4-18]
          Length = 253

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 36/156 (23%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   E G       +  GR    TP  +  I     N           
Sbjct: 23  DHLILVNLTTNQLSFFEEGNYTRTFPITTGRDRTPTPEGNFCIITKYKN----------- 71

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+      +                                            N + +  
Sbjct: 72  KEYHRKKIRGGA---------------------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +    +H T       +     ++GC+R+ +
Sbjct: 93  LGLDKKE-YAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|229095400|ref|ZP_04226391.1| hypothetical protein bcere0020_6560 [Bacillus cereus Rock3-29]
 gi|229114351|ref|ZP_04243769.1| hypothetical protein bcere0017_6500 [Bacillus cereus Rock1-3]
 gi|228669030|gb|EEL24454.1| hypothetical protein bcere0017_6500 [Bacillus cereus Rock1-3]
 gi|228687946|gb|EEL41833.1| hypothetical protein bcere0020_6560 [Bacillus cereus Rock3-29]
          Length = 253

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 36/156 (23%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   E G       +  GR    TP  +  I     N           
Sbjct: 23  DHLILVNLTTNQLSFFEEGNYTRTFPITTGRDRTPTPEGNFCIITKYKN----------- 71

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
           K+      +                                            N + +  
Sbjct: 72  KEYHRKKIRGGA---------------------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +    +H T       +     ++GC+R+ +
Sbjct: 93  LGLDKKE-YAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|332992109|gb|AEF02164.1| hypothetical protein ambt_03050 [Alteromonas sp. SN2]
          Length = 558

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAF----DAYVESAVKLFQMRHGLDPSGMVDSST 161
           +SS  ++ +R RLI  G L      +       D  +   +K FQ   G+   G     T
Sbjct: 38  DSSAYIRAIRARLIELGYLGEGHKFANRHNPQTDRILIKKIKQFQYDAGITQDGWAGKLT 97

Query: 162 LEAMN 166
            + + 
Sbjct: 98  WQVLE 102


>gi|89892890|ref|YP_516377.1| hypothetical protein DSY0144 [Desulfitobacterium hafniense Y51]
 gi|219666153|ref|YP_002456588.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense
           DCB-2]
 gi|89332338|dbj|BAE81933.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536413|gb|ACL18152.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 115

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 6/61 (9%)

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
               A  +  +     +   +H T +P          + GC+R+ N  +  L   +   T
Sbjct: 54  NPGGAFGTRWLGLSLPD-YGIHGTNKPASIGT---QASLGCIRMHNHHVEALYDQVGAGT 109

Query: 361 P 361
           P
Sbjct: 110 P 110


>gi|168178137|ref|ZP_02612801.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum NCTC 2916]
 gi|182670829|gb|EDT82803.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum NCTC 2916]
          Length = 238

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L     +   +V+ ++ +L   G      G+   F      +VK FQ    L   G
Sbjct: 164 PGYLLKYNPNSFDANVKVIQSKLQNIGYSVGKSGVDGYFGDGTLLSVKCFQRDCNLYVDG 223

Query: 156 MVDSSTLEAM 165
           +V   T + +
Sbjct: 224 IVGKDTWKVL 233


>gi|218528395|ref|YP_002419211.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218520698|gb|ACK81283.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 305

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 39/180 (21%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +R +           ++V+  A  L  V       R  V VG+    +    + +N   
Sbjct: 148 FLRQEVDFRTNEAPGTIVVDPKAHFLYLVLPNGRARRYGVGVGKQG-FSWSGSATVNSKQ 206

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P+ +I +     L ++   L+                                
Sbjct: 207 AWPDWYPPKEMIARR--PDLAREVDKLQSG----------------------------LG 236

Query: 300 QDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G  N + +  +  +  +++  + +H T EP          +SGC+R+  ++ IDL  
Sbjct: 237 VPGGSRNPLGARAMYLWQNNKDTLFRIHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 293


>gi|217979969|ref|YP_002364116.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217505345|gb|ACK52754.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 79

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 6/63 (9%)

Query: 291 PEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
              P+     D G  N + +  +     +++  + +H   EP          +SGC+R+ 
Sbjct: 3   ARRPDLPDSMDGGLENPLGARALYLYQGNKDTLFRIHGANEPNTIGQ---AVSSGCIRMT 59

Query: 348 NII 350
           N  
Sbjct: 60  NAD 62


>gi|224826478|ref|ZP_03699580.1| Peptidoglycan-binding domain 1 protein [Lutiella nitroferrum 2002]
 gi|224601579|gb|EEG07760.1| Peptidoglycan-binding domain 1 protein [Lutiella nitroferrum 2002]
          Length = 553

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 2/102 (1%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSK 128
             +T      A+           W   P    PL  G+  + V  L  +     +   + 
Sbjct: 434 GTQTFTLPVSALNQLWSGRYTLLWKAPPNYRAPLARGSRGLMVSWLNHQFGQPLEPLAAT 493

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             +  FDA +E  V  FQ   GL   G+V   TL  +    D
Sbjct: 494 AKNPVFDARLEEQVMRFQRADGLPSDGIVGPHTLIRLTRNSD 535


>gi|153874337|ref|ZP_02002595.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
 gi|152069197|gb|EDN67403.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
          Length = 110

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHI 368
             +   Y+H T E           + GC+R+ N  +I+L   +++ T    R  +
Sbjct: 59  SYKRYIYIHGTAEENKIGQP---ASHGCIRMYNRDVIELFDLVMEGTKVDIRDEV 110


>gi|239636899|ref|ZP_04677898.1| carboxy- processing protease [Staphylococcus warneri L37603]
 gi|239597573|gb|EEQ80071.1| carboxy- processing protease [Staphylococcus warneri L37603]
          Length = 493

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   LG+++  V+ ++  L   G    ++  S  FD  +ESA+K FQ  + L  +G  D
Sbjct: 406 DKTYKLGDNNKHVKTMKIGLTALGFKVDNETKS--FDTSLESAIKAFQKDNDLTVNGEFD 463

Query: 159 SST 161
             T
Sbjct: 464 KET 466


>gi|296329600|ref|ZP_06872085.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305673998|ref|YP_003865670.1| N-acetylmuramoyl-L-alanine amidase; PBSZ phage [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296153098|gb|EFG93962.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412242|gb|ADM37361.1| N-acetylmuramoyl-L-alanine amidase; PBSZ phage [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 297

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   +       S   V +++  L            + G+   +      AV  FQ  
Sbjct: 216 PLPDGIIKLTTPYTSGEHVFQVQRALAALYFYPDKGAVNNGIDGIYGPKTADAVARFQSV 275

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+   +T   +  
Sbjct: 276 NGLTADGIYGPATKAKIAA 294


>gi|188582261|ref|YP_001925706.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179345759|gb|ACB81171.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 231

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 8/94 (8%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TY 322
                   +  KG               P     +  G  N + +  +  Y+ N      
Sbjct: 123 FSWKGDARVGRKGVWPDWSPTTTMVSLNPGIERSRKGGIDNPLGARALYLYNGNRDTLFR 182

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           +H T EP      +   +SGCVR+   +I+DL  
Sbjct: 183 IHGTNEPWSIGEQM---SSGCVRMLNEDIVDLYE 213


>gi|86143221|ref|ZP_01061623.1| putative phage-related protein [Leeuwenhoekiella blandensis MED217]
 gi|85830126|gb|EAQ48586.1| putative phage-related protein [Leeuwenhoekiella blandensis MED217]
          Length = 273

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 12/155 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   +    V  L E L   G       +S  F     +AVK FQ ++ L   G+V  
Sbjct: 2   KTLRYRSRGQEVYFLEELLQKLGY---EVYVSTYFGLDTNNAVKDFQQKNNLVVDGIVGL 58

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
            T   +    +             K L EQ +       ++    L AV+       +  
Sbjct: 59  KTWSKLLAQENQIFD------ANSKLLSEQDLIDFAQRYDL---ELAAVKAVNEIESNGK 109

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
                D+   +    I         + P++ +  +
Sbjct: 110 GFLVGDKPRILFEGHIFWRQLEAKGIDPKNYVSDE 144


>gi|306842165|ref|ZP_07474834.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
 gi|306287752|gb|EFM59183.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
          Length = 289

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 125 PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 183

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 184 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 215

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 216 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 267

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 268 FLNQDIIDLYDRVPAKTP 285


>gi|300856168|ref|YP_003781152.1| putative cell wall hydrolase [Clostridium ljungdahlii DSM 13528]
 gi|300436283|gb|ADK16050.1| putative cell wall hydrolase [Clostridium ljungdahlii DSM 13528]
          Length = 306

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V  ++++L   G L  +    + +D     AV   Q        G++   T
Sbjct: 240 IAKGHKSHVVLWIQQKLEQYGYLKKNSYTPMVYDEATFQAVTNLQKNWRKATDGILGPDT 299

Query: 162 LE 163
             
Sbjct: 300 WS 301


>gi|254558815|ref|YP_003065910.1| hypothetical protein METDI0176 [Methylobacterium extorquens DM4]
 gi|254266093|emb|CAX21845.1| conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG
           family protein [Methylobacterium extorquens DM4]
          Length = 292

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 39/180 (21%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +R +           ++V+  A  L  V       R  V VG+    +    + +N   
Sbjct: 135 FLRQEVDFRTNEAPGTIVVDPKAHFLYLVLPNGRARRYGVGVGKQG-FSWSGSATVNSKQ 193

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P+ +I +     L ++   L+                                
Sbjct: 194 AWPDWYPPKEMIARR--PDLAREVDKLQSG----------------------------LG 223

Query: 300 QDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G  N + +  +  +  +++  + +H T EP          +SGC+R+  ++ IDL  
Sbjct: 224 VPGGSRNPLGARAMYLWQNNKDTLFRIHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 280


>gi|228969115|ref|ZP_04130029.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228790604|gb|EEM38291.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis serovar sotto str. T04001]
          Length = 335

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPSGM 156
           P +P+  G+   +++ ++  L +         +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKRGDRGRNIEAIQRTLKL--------SVDGVFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|323357749|ref|YP_004224145.1| hypothetical protein MTES_1301 [Microbacterium testaceum StLB037]
 gi|323274120|dbj|BAJ74265.1| uncharacterized protein conserved in bacteria [Microbacterium
           testaceum StLB037]
          Length = 252

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 18/72 (25%), Gaps = 17/72 (23%)

Query: 304 KINA-MASTKIEFY-----------SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII- 350
             NA                           +H T +           + GC+R+ N   
Sbjct: 179 PTNAGYGPYAFGLSAFSDVLTSFGGGPGQIGLHGTDDESTIGQS---VSHGCIRMSNADI 235

Query: 351 -DLDVWLLKDTP 361
            +L   L   TP
Sbjct: 236 TELARLLPLGTP 247


>gi|311897287|dbj|BAJ29695.1| hypothetical protein KSE_38990 [Kitasatospora setae KM-6054]
          Length = 605

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 27/83 (32%), Gaps = 6/83 (7%)

Query: 86  QDILSRGGWPELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           Q      G P  P R L           V   + RL   G    S      +        
Sbjct: 524 QATAPASGPPRWPGRYLRTQTPMLHGDDVLMWQRRLAARG---WSISADGWYGPDSARVC 580

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
           + FQ RHGL   G+V  +T +A 
Sbjct: 581 RAFQQRHGLAVDGVVGPATWDAA 603


>gi|240136962|ref|YP_002961431.1| hypothetical protein MexAM1_META1p0192 [Methylobacterium extorquens
           AM1]
 gi|240006928|gb|ACS38154.1| conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG
           family protein [Methylobacterium extorquens AM1]
          Length = 292

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 39/180 (21%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +R +           ++V+  A  L  V       R  V VG+    +    + +N   
Sbjct: 135 FLRQEVDFRTNEAPGTIVVDPKAHFLYLVLPNGRARRYGVGVGKQG-FSWSGSATVNSKQ 193

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P+ +I +     L ++   L+                                
Sbjct: 194 AWPDWYPPKEMIARR--PDLAREVDKLQSG----------------------------LG 223

Query: 300 QDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G  N + +  +  +  +++  + +H T EP          +SGC+R+  ++ IDL  
Sbjct: 224 VPGGSRNPLGARAMYLWQNNKDTLFRIHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 280


>gi|228907493|ref|ZP_04071350.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis IBL 200]
 gi|228851985|gb|EEM96782.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Bacillus
           thuringiensis IBL 200]
          Length = 335

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPSGM 156
           P +P+  G+   +++ ++  L +         +   F    E  VK +Q     L   G+
Sbjct: 274 PGKPIKQGDRGRNIEAIQRTLKV--------SVDGIFGKETEEKVKEYQRNSSFLSIDGV 325

Query: 157 VDSSTLEAM 165
           V   T  A+
Sbjct: 326 VGMQTWYAL 334


>gi|269124313|ref|YP_003297683.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268309271|gb|ACY95645.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 332

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS---GMVD 158
           L  G++   V+ L+  L+ +G+  P  G+   F A  E+AV+ FQ +H  +     G   
Sbjct: 171 LKRGDTGDRVRDLQSALLKAGERLPEYGVDGDFGAETEAAVRSFQSKHPDEVDRVTGRYG 230

Query: 159 SSTLEAMNV 167
             T  A+  
Sbjct: 231 PQTAAALAR 239



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 20/68 (29%), Gaps = 11/68 (16%)

Query: 106 NSSVSVQ----RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                V+    ++R+R            +  A+    E   + FQ   GL   G+V   T
Sbjct: 270 MRGDDVRRWQSQMRKRGWRL-------TVDGAYGPRSEQVCRAFQEEKGLAVDGVVGLVT 322

Query: 162 LEAMNVPV 169
                   
Sbjct: 323 WRQAWEAP 330


>gi|126739742|ref|ZP_01755433.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. SK209-2-6]
 gi|126718974|gb|EBA15685.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. SK209-2-6]
          Length = 173

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 298 FRQDPGKINAMASTKIEFY-SRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDL 352
           + Q  G  N + +  +  Y +  +TY  +H T +P    +     ++GC+R+ N  + DL
Sbjct: 104 YIQPGGPDNPLGARALYLYQNGVDTYFRIHGTNQPQTIGSS---ASNGCIRMLNDHVTDL 160

Query: 353 DVWLLKDTP 361
              +   T 
Sbjct: 161 YERVPLGTV 169


>gi|311893468|dbj|BAJ25876.1| hypothetical protein KSE_00230t [Kitasatospora setae KM-6054]
 gi|311900994|dbj|BAJ33402.1| hypothetical protein KSE_76510t [Kitasatospora setae KM-6054]
          Length = 267

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 12/73 (16%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV---------DS 159
             V+ ++ RL+  G       +  ++ A    AV+ FQ  HGL P+G+V          +
Sbjct: 58  EEVKEIQRRLVAHGY---PVTVDGSYGARTLYAVQDFQRDHGLAPTGLVHDFAPTGFDTN 114

Query: 160 STLEAMNVPVDLR 172
           +T  A+  P   +
Sbjct: 115 TTFFALLAPPAKK 127


>gi|261855752|ref|YP_003263035.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus
           c2]
 gi|261836221|gb|ACX95988.1| ErfK/YbiS/YcfS/YnhG family protein [Halothiobacillus neapolitanus
           c2]
          Length = 220

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                 Y+H TPE  L     R E+ GC+R+ N  +I+L   +   T
Sbjct: 171 SHARYIYIHGTPEEGLIG---RPESHGCIRMNNTQVIELFNQVPVGT 214


>gi|23006269|ref|ZP_00048665.1| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 248

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 39/191 (20%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  ++     +R +           ++V+  A  L  V       R  V VG+    +
Sbjct: 80  AAIPYKKFNQTYLRQEVDFRTTEPPGTIVVDPKAHFLYFVLPNGRARRYGVGVGKQG-FS 138

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + IN     P W  P+ +I +     L      L+                     
Sbjct: 139 WSGTATINSKQAWPDWYPPKEMIARR--PDLASQVDKLQSG------------------- 177

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +  +  +++  + +H T EP          +SGC+R
Sbjct: 178 ---------LGVPGGTRNPLGARAMYLWQNNKDTLFRIHGTLEPQSIGKS---VSSGCIR 225

Query: 346 V--RNIIDLDV 354
           +  ++ IDL  
Sbjct: 226 MINQDAIDLFN 236


>gi|256044792|ref|ZP_05447696.1| hypothetical protein Bmelb1R_09884 [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 230

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 18/211 (8%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             A  V  + ++ +   N+ ++      K           A +     N     + ++  
Sbjct: 23  FVASPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDP 78

Query: 222 -GRVDRQTPILHSRINRIMFNPYW----VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             R    T   +     ++         V   +  ++  +A+ +Q  ++     I    E
Sbjct: 79  KFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTARRYGIAVGKQGLEFQGKATISAKRE 138

Query: 277 KGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILF 332
             + +   E ++ +      F    D G  N + S  +  +  N      +H T +P   
Sbjct: 139 WPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTI 198

Query: 333 NNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +     ++GC R+   +++DL   +   T 
Sbjct: 199 GSS---ASNGCFRMINEDVMDLYDRVTLGTE 226


>gi|170288938|ref|YP_001739176.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2]
 gi|170176441|gb|ACB09493.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga sp. RQ2]
          Length = 382

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 53/160 (33%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +     ++VN+ ++ L    +G +     V +GR D   P             YW    
Sbjct: 246 FRENPVTIVVNLFSSKLALYYDGVLLKVYPVALGRSDTTPP-----------GRYW---- 290

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
            I++K++   L                  G+ +                       +N +
Sbjct: 291 -ILRKEIDPAL---------------YWFGEYISPRT------------------PLNGL 316

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +  ++  +     +H T +P          + GC+R+ N
Sbjct: 317 GTRYLQLSNP-TYAIHGTSKPWEIGKR---ISHGCIRMFN 352


>gi|330685052|gb|EGG96722.1| peptidase, S41 family [Staphylococcus epidermidis VCU121]
          Length = 493

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   LG+++  V+ ++  L   G    ++  S  FD  +ESA+K FQ  + L  +G  D
Sbjct: 406 DKTYKLGDNNKHVKTMKIGLTALGFKVDNESKS--FDTSLESAIKAFQKDNDLTINGEFD 463

Query: 159 SST 161
             T
Sbjct: 464 KET 466


>gi|228983950|ref|ZP_04144140.1| hypothetical protein bthur0001_6630 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775770|gb|EEM24146.1| hypothetical protein bthur0001_6630 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 253

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 263 PQYLKDNNIH----MIDEKGKEVFVEEVD--WNSPEPPNFIFRQDPG--KINAMASTKIE 314
             + ++ N      +   + +    E         +   +  ++  G    N + +  + 
Sbjct: 35  LSFFENGNYTKTFSVTTGRDRTPTPEGNFCIITKFKNKEYHRKKIAGGAPNNPLGTRWLG 94

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              +N   +H T       +     ++GC+R+ +
Sbjct: 95  L-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|311068639|ref|YP_003973562.1| carboxy-terminal processing protease [Bacillus atrophaeus 1942]
 gi|310869156|gb|ADP32631.1| carboxy-terminal processing protease [Bacillus atrophaeus 1942]
          Length = 466

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 14/113 (12%)

Query: 77  QTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           Q + A+  Y  +      P L   +    G+S  +V+  ++ L   G       ++  +D
Sbjct: 360 QVKAALPDYAKL------PYLDADKTYKSGDSGNNVKVAQQMLKALGY---KVNVNSTYD 410

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSST----LEAMNVPVDLRIRQLQVNLMRIK 184
              E+ VK FQ +  L  +G++   T    +  +   +     Q++  +  +K
Sbjct: 411 KAFETVVKQFQAKEKLKETGVLTGDTTTKLMTELQGKLSDNDTQMKQAIETLK 463


>gi|291484557|dbj|BAI85632.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           natto BEST195]
          Length = 466

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++  +V+  ++ L   G       ++  +D    S VK FQ +  L  +G++
Sbjct: 376 ADKTYKSGDTGTNVKVAQKMLKALGY---KVNVNSTYDQDFVSVVKQFQKKEELKETGIL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T   + + +  ++      + +
Sbjct: 433 TGDTTTKLMIELQKKLSDNDTQMEK 457


>gi|153954544|ref|YP_001395309.1| Phage-related amidase [Clostridium kluyveri DSM 555]
 gi|146347402|gb|EDK33938.1| Predicted Phage-related amidase [Clostridium kluyveri DSM 555]
          Length = 279

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V  L+++L + G L       + +D     AV   Q R      G++   T
Sbjct: 213 IAKGHKSHIVLWLQQKLEMWGYLKKGSYTDMIYDEPTFQAVTELQKRWERPTDGVLRLET 272

Query: 162 LEAM 165
               
Sbjct: 273 WSVF 276


>gi|126698130|ref|YP_001087027.1| putative spore peptidoglycan hydrolase [Clostridium difficile 630]
 gi|255099657|ref|ZP_05328634.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-63q42]
 gi|255305541|ref|ZP_05349713.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile ATCC
           43255]
 gi|115249567|emb|CAJ67384.1| Spore cortex-lytic enzyme pre-pro-form [Clostridium difficile]
          Length = 423

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAV 142
           +  +  G     P   L +G+S   V+ ++ +L  IS        +     +    E+AV
Sbjct: 324 RAPIVSGVPVSFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGTDTENAV 383

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
           K+FQ   GL  SG+VD  T   ++ 
Sbjct: 384 KIFQGIFGLPQSGVVDFKTWYEISR 408


>gi|15895682|ref|NP_349031.1| peptidoglycan-binding domain-containing protein [Clostridium
           acetobutylicum ATCC 824]
 gi|15025432|gb|AAK80371.1|AE007742_5 Uncharacterized protein, ErfK family; contains
           peptidoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325509832|gb|ADZ21468.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 235

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 24/83 (28%), Gaps = 13/83 (15%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK      +   +    +       G+        + F        +H T  P     
Sbjct: 72  AGGKPSTPSPIGTWTIVGKDTW-----GEG--FGGRWMGFNVPWGKYGIHGTIFPDSIGG 124

Query: 335 VVRFETSGCVRVRN--IIDLDVW 355
                + GC+R+RN  + +L   
Sbjct: 125 NT---SHGCIRMRNDDVRELYKI 144



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R +  G+    V  +++ L   G    S      +   ++  +  FQ  + L  S ++  
Sbjct: 166 RSIKPGDRGSDVYEVQKILREKGYY--SGTPDGIYGEGMKYCIHKFQKDNNLYISDIITR 223

Query: 160 STLEAMNVPVDL 171
              E + V +  
Sbjct: 224 KFYEKLGVDLTE 235


>gi|218681016|ref|ZP_03528913.1| hypothetical protein RetlC8_20073 [Rhizobium etli CIAT 894]
          Length = 268

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 64/198 (32%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I ++Q   +R +   +       V+V+  A  L  VE G   +R  V +GR     
Sbjct: 104 PAIPISRVQPQFLRQEVDYQTTERPGTVIVDTKAHFLYFVEAGGKAMRYGVGLGREG-YA 162

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +                              +   +
Sbjct: 163 WSGRGVIQWKQKWPRWTPPVEMVSRQ----------------------------PDVRAF 194

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++          +PG  N + +  +      ++  Y +H TP+           +SGCVR
Sbjct: 195 SAENGGM-----NPGLQNPVGARAMYIFKDGQDTLYRIHGTPDWQSIGK---ATSSGCVR 246

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++++DL   L     
Sbjct: 247 MLNQDVVDLYDRLPAKAE 264


>gi|164687688|ref|ZP_02211716.1| hypothetical protein CLOBAR_01330 [Clostridium bartlettii DSM
           16795]
 gi|164603462|gb|EDQ96927.1| hypothetical protein CLOBAR_01330 [Clostridium bartlettii DSM
           16795]
          Length = 424

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
              L +G+    V+ ++ +L  IS      P       +      AV+ FQ   GL  +G
Sbjct: 338 GTTLEIGSEGTPVRTIQNQLNAISNSYPAIPKVAEDGIYGPSTAEAVRTFQKIFGLPQTG 397

Query: 156 MVDSSTLEAMNV 167
           +VD  T   ++ 
Sbjct: 398 VVDFKTWYEISR 409


>gi|146276712|ref|YP_001166871.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554953|gb|ABP69566.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 260

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 17/203 (8%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A   P       + ++          + G R +    P    E     +V   +      
Sbjct: 23  APEPPPSRSAAPMGISPQIAAVYGPVQDGERIIPAVPPQYLAEHKIRREVDYWTDQ---- 78

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF- 282
                P     ++      Y V P     +  +A+ R+   +  D  I +  E  + +  
Sbjct: 79  -----PPGTIVVDPYARYLYLVQPGQRAIRYAVAVGREGRGFSGDAVIPIKREWPRWIPT 133

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFE 339
              ++ +  +   +    D G  N + +  +  +   ++  Y +H T +           
Sbjct: 134 KSMIEEDPEQYGPYRDGMDGGLSNPLGARALYLHRNGKDTYYRIHGTNDVSSIGQ---AT 190

Query: 340 TSGCVRVRNIIDLDVWLLKDTPT 362
           ++GC+R+ N  D+     +  P 
Sbjct: 191 SAGCIRLWN-QDILDLYARVQPG 212


>gi|254558970|ref|YP_003066065.1| hypothetical protein METDI0342 [Methylobacterium extorquens DM4]
 gi|254266248|emb|CAX22006.1| conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG
           family protein [Methylobacterium extorquens DM4]
          Length = 283

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 44/184 (23%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R L+   +R       K     ++V+     L  V  G   +R  V VG+   +     +
Sbjct: 62  RDLKARNVRQVVDYPTKEPPGTLVVDPYRRFLYLVMEGGKAMRYGVGVGKAGFE-FTGEA 120

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            + R    P W     +I++D     R                                 
Sbjct: 121 TVARKASWPRWTPTPDMIRRDPARNGRWAGG----------------------------- 151

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RN 348
                    G  N + +  +      ++  Y +H T EP          +SGC+R+  ++
Sbjct: 152 ------MPGGDRNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AVSSGCIRMLNQD 202

Query: 349 IIDL 352
           +IDL
Sbjct: 203 VIDL 206


>gi|98647786|gb|ABF58910.1| matrix metalloprotease 1 [Nicotiana tabacum]
          Length = 365

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 32/64 (50%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     + ++++     G +      +  FD  +ESA+K +Q    L+ +G++D+ T++ 
Sbjct: 53  GQKVDGLAKIKKYFYNFGYIPSLSNFTDDFDDALESALKTYQQNFNLNTTGVLDAPTIQH 112

Query: 165 MNVP 168
           +  P
Sbjct: 113 LIRP 116


>gi|114762230|ref|ZP_01441698.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114545254|gb|EAU48257.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. HTCC2601]
          Length = 195

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 48/172 (27%), Gaps = 46/172 (26%)

Query: 179 NLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +   +        +    +LV+I + +L   +   V       V   +  T    +R+  
Sbjct: 49  SFRTLDWQPYFSNLNNGAILVDISSRALHYWQESGVYHLYPCSVPLTEDLTRRGRTRVTL 108

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
               P W    S+         +++P++                                
Sbjct: 109 KDPEPDWRPTPSMK--------KRNPEW-------------------------------P 129

Query: 298 FRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
               PG  N + +  +        Y +H T +        R  ++GC+ + N
Sbjct: 130 DYVGPGPDNPLGTRAMHLS--WTYYRIHGTHDTRKIG---RRSSNGCIGLYN 176


>gi|294852476|ref|ZP_06793149.1| carnitine operon oxidoreductase CaiA [Brucella sp. NVSL 07-0026]
 gi|294821065|gb|EFG38064.1| carnitine operon oxidoreductase CaiA [Brucella sp. NVSL 07-0026]
          Length = 255

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 71/208 (34%), Gaps = 18/208 (8%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV-GR 223
             V  + ++ +   N+ ++      K           A +     N     + ++    R
Sbjct: 51  SPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDPKFR 106

Query: 224 VDRQTPILHSRINRIMFNPY---WVIPRSIIQKDM-MALLRQDPQYLKDNNIHMIDEKGK 279
               T   +     ++       +++  S+  +   +A+ +Q  ++     I    E  +
Sbjct: 107 PQDVTFTGYKPGTIVIDPKKRFLYLVETSMTARRYGIAVGKQGLEFQGKATISAKREWPR 166

Query: 280 EVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN-TYMHDTPEPILFNNV 335
            +   E ++ +      F    D G  N + S  +     +++    +H T +P    + 
Sbjct: 167 WIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS 226

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDTP 361
               ++GC R+   +++DL   +   T 
Sbjct: 227 ---ASNGCFRMINEDVMDLYDRVTLGTE 251


>gi|117621302|ref|YP_858233.1| general secretion pathway protein A [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562709|gb|ABK39657.1| general secretion pathway protein A [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 525

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 9/168 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIP-----IISKETIAQTEKAIAFYQDILSRGGW 94
           +    +  +    D         + +  P     +I  ++     + ++ Y        W
Sbjct: 354 LQALQYPALVSLTDETGGTYYATLVNLGPDKANLLIGNQSWQVDRQWLSDYWGGSYTLLW 413

Query: 95  PELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
                    +GN++    VQ L   L  +  L         FDA +++ ++ FQ   GL+
Sbjct: 414 RMPKGGVTLIGNNAGPSQVQWLDNALSRA--LQQPDRKVRRFDAELKTKLQQFQRAQGLN 471

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           P G+  S+TL  +NV     + +L+    R  K            +N 
Sbjct: 472 PDGIAGSNTLLRLNVMAGEPMPKLEDPAQRASKPARLDPAEDDDAINT 519


>gi|294500843|ref|YP_003564543.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
 gi|294350780|gb|ADE71109.1| N-acetylmuramoyl-L-alanine amidase [Bacillus megaterium QM B1551]
          Length = 344

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--P 153
            LP   L  G+S  +V++L+  L           +   +    + AV+ FQ+ + L    
Sbjct: 268 PLPNGILKQGDSGEAVKQLQRALNAVNF--KVGSVDGIYGVQTKDAVRRFQLVY-LPYDV 324

Query: 154 SGMVDSST 161
            G+    T
Sbjct: 325 DGIYGPQT 332


>gi|254454175|ref|ZP_05067612.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
 gi|198268581|gb|EDY92851.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
          Length = 178

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 9/148 (6%)

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
             + R+DR        +    F  YWV+   +  +  + + R       D  I +  E  
Sbjct: 29  PRIVRIDRDYATGEIHVEPNNFKLYWVLGPGLAMEYSVGIGRAGLYESGDFMIQVKKEWP 88

Query: 279 KEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNN 334
                   ++ +      F    + G  N + +  +  F    +TY  +H T  P    +
Sbjct: 89  SWTPTPAMIERSPQSYAQFADGMEGGINNPLGARALYLFSGDRDTYLRIHGTNAPNTIGS 148

Query: 335 VVRFETSGCVRVRN--IIDLDVWLLKDT 360
                ++GCVR+ N  I DL   +  +T
Sbjct: 149 ---AVSNGCVRLVNSHISDLYNRVPLNT 173


>gi|218847877|ref|YP_002454610.1| N-acetylmuramoyl-L-alanine amidase CwlA [Bacillus cereus G9842]
 gi|218546379|gb|ACK98771.1| N-acetylmuramoyl-L-alanine amidase CwlA [Bacillus cereus G9842]
          Length = 364

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGL 151
            LP   L  G+S  SV+ +++ L           P+ G    +     +AV  FQ  +  
Sbjct: 285 TLPDGVLKKGSSGESVRAVQKALTSVYFYPDKSAPNYGCDGFYGDKTVNAVYRFQSVYCS 344

Query: 152 DPSGMVDSSTLEAMNVPVDL 171
           +  G+    T   +   ++ 
Sbjct: 345 NADGIYGPETKRKLIEQINK 364


>gi|126654267|ref|ZP_01726053.1| hypothetical protein BB14905_17570 [Bacillus sp. B14905]
 gi|126589278|gb|EAZ83437.1| hypothetical protein BB14905_17570 [Bacillus sp. B14905]
          Length = 504

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G  S SV+   E L + G       +   FD     AV+  Q  + L+ +G++  +T
Sbjct: 409 MKAGMQSDSVKAAEEMLQVLGY--EPGEIDGLFDDNTAHAVEQLQAANNLEETGVLTGNT 466

Query: 162 LEAM 165
             A+
Sbjct: 467 TYAL 470


>gi|331090845|ref|ZP_08339691.1| hypothetical protein HMPREF9477_00334 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330399704|gb|EGG79366.1| hypothetical protein HMPREF9477_00334 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 540

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 58/218 (26%), Gaps = 62/218 (28%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           ++  G     T + +      R  + +   +  +       G  Y  V++    +   +N
Sbjct: 373 INQDGEYKKLTEDILAGNSVKREPEYKRKAVSHEG---NDFGNTYAEVDLTTQHMWFFQN 429

Query: 211 GKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           GK+ + S ++ G+      TP     +             ++++  ++            
Sbjct: 430 GKLMMESPIVTGKPSTGHATPQGTYTVTY-------TQKGAVLRGKILP----------- 471

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
                    GK  +   VD+                                   HD   
Sbjct: 472 --------NGKREYETPVDFW-------------------------MPFNGGIGFHDATW 498

Query: 329 PILFNNVVRFE---TSGCVRV--RNIIDLDVWLLKDTP 361
              F    R+    + GCV +       L  +L   TP
Sbjct: 499 QSSFG-GNRYLTHGSHGCVNMPYDKAQQLFGYLKAGTP 535


>gi|254414414|ref|ZP_05028180.1| D-alanyl-D-alanine carboxypeptidase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178644|gb|EDX73642.1| D-alanyl-D-alanine carboxypeptidase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 881

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 6/80 (7%)

Query: 86  QDILSRGG--WPELPIRPLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           + I+   G  W    I  L       + V+++++ L    D     G+   F    ++AV
Sbjct: 282 RSIIGGFGEVWQGFEIIKLTSPYMHGIDVRKIQQALA---DAKIDVGVDGVFGPGTQAAV 338

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
           KLFQ    L   G+V  +TL
Sbjct: 339 KLFQKARNLITDGVVGPATL 358


>gi|77462770|ref|YP_352274.1| hypothetical protein RSP_2218 [Rhodobacter sphaeroides 2.4.1]
 gi|126461662|ref|YP_001042776.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|77387188|gb|ABA78373.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126103326|gb|ABN76004.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 180

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 41/158 (25%), Gaps = 44/158 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   E+G V  R    +        +  +RI R +  P W    ++  +D          
Sbjct: 61  LFWSEDGTVHRRYPAAMPDTRAFPRLGGTRIIRKVEGPTWRPTPAMRARD---------- 110

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                                        P   +   PG  N   +  +    ++   +H
Sbjct: 111 -----------------------------PELPWSLPPGPGNPFGTHALHLEWQH-YRIH 140

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            T +P     V      GC+ + N   +       T  
Sbjct: 141 GTHDPSTIGGVTA---HGCIGLSNAH-IAELFAHTTVG 174


>gi|209551558|ref|YP_002283475.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537314|gb|ACI57249.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 227

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 63/198 (31%), Gaps = 45/198 (22%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +A      + I +++    R     +       ++VN     L  +      +R  + 
Sbjct: 52  TKDAGYSLPAIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIG 111

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+         + +      P W  P+ +  +     + +          ++ D  G  
Sbjct: 112 VGKQGFA-WAGTAYVAWKQEWPTWHPPKEMAVRR--PDVAK----------YVEDGMG-- 156

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVV 336
                                PG  N + +  +  ++ +       +H TPE        
Sbjct: 157 ---------------------PGLSNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGT-- 193

Query: 337 RFETSGCVRV--RNIIDL 352
              +SGC+R+  +++IDL
Sbjct: 194 -AASSGCIRLMNQDVIDL 210


>gi|33599771|ref|NP_887331.1| putative type II secretion system protein [Bordetella
           bronchiseptica RB50]
 gi|33567368|emb|CAE31281.1| putative type II secretion system protein [Bordetella
           bronchiseptica RB50]
          Length = 459

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 5/69 (7%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           D+  R  W          G    SVQ L++RL  +G L         + A    A+  FQ
Sbjct: 367 DLAWRAPWRP---EDFASGGPHPSVQALQQRLGAAGLLATRA--DGIYGAQTRQALASFQ 421

Query: 147 MRHGLDPSG 155
             H L  +G
Sbjct: 422 RDHALPATG 430


>gi|163735625|ref|ZP_02143056.1| Twin-arginine translocation pathway signal [Roseobacter litoralis
           Och 149]
 gi|161391053|gb|EDQ15391.1| Twin-arginine translocation pathway signal [Roseobacter litoralis
           Och 149]
          Length = 209

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 19/177 (10%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
           L  Q+     V  NI + S +  ++    L+   I+  +D +     S    +       
Sbjct: 46  LRAQEQEPSAVRRNISSFSADPWQDHFDNLQHGAILCDIDSRAVQYWSEDESVYKLYPSS 105

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
           +P S              + L       +  K +              P +     PG  
Sbjct: 106 VPAS--------------EELTRRGYTKVIRKVEGPSWRPTPSMKERNPEWPDYWPPGPD 151

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           N + +  +    +    +H T +        R  ++GC+ + N   +          
Sbjct: 152 NPLGTHALYLSWQY-YRVHGTGDTRKIG---RQSSNGCIGLYN-EHIAELFALAEVG 203


>gi|86747446|ref|YP_483942.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86570474|gb|ABD05031.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 175

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 41/163 (25%), Gaps = 45/163 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++V      L  V      +R  V VG+  + +    ++I+    NP W  
Sbjct: 37  FRGDYSPGTIVVKTHERKLYLVVEPGQAVRYPVGVGKPGK-SWQGVTKIDGKYRNPAWAP 95

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + P        G   
Sbjct: 96  PADVKR---------------------------------------DNPAIPDVIAGGTPE 116

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    +         +H T  P        F + GC+R+ N
Sbjct: 117 NPMGVAAMTLAGGE-YAIHGTNRPNSIG---GFVSYGCIRMLN 155


>gi|75677198|ref|YP_319619.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74422068|gb|ABA06267.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 187

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R     + +     V++      L  V  G   LR  + VGR D        RI+     
Sbjct: 45  RQLVYFQSRYAPGTVVIRTGERRLYLVLPGGQALRYGIGVGR-DGFRWSGVHRISAKKEW 103

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 104 PSWTPPAQMLRRR---------------------------------------PDLPRFMR 124

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC R+ N
Sbjct: 125 GGLENPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTN 167


>gi|328882102|emb|CCA55341.1| hypothetical protein SVEN_2054 [Streptomyces venezuelae ATCC 10712]
          Length = 333

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GM 156
              L LG+S   V+ L+ RL           ++  FD  V+ AV  +Q    +     G+
Sbjct: 260 AVTLSLGSSGPEVRELQRRLEAV--WAYHGRINGRFDEEVQEAVARYQSWRYVQDDPEGV 317

Query: 157 VDSSTLEAMNVP 168
              +T   +   
Sbjct: 318 YGPTTRRLLEEN 329


>gi|326332362|ref|ZP_08198641.1| LigA [Nocardioidaceae bacterium Broad-1]
 gi|325949851|gb|EGD41912.1| LigA [Nocardioidaceae bacterium Broad-1]
          Length = 388

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  R L  G     V++L + L   G           +      AV  +Q   G++ 
Sbjct: 135 GTVPAWRDLAPGVEGKDVKQLEKNLWALGYRGFDVDEDYTY--ATADAVAEWQEDLGVEE 192

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
           +G +   T + +  P  +RI  L  +L     
Sbjct: 193 TGKI--RTGDVVVQPAAVRIGSLSASLGDQAG 222


>gi|150395799|ref|YP_001326266.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150027314|gb|ABR59431.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 227

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  RQ+     R +           ++V+     L  ++     +R  V +GR     
Sbjct: 63  PAVPFRQIDPRFYRQEVSDPFGEAPGTIVVDTADRYLYLIQPRGRAMRYGVGLGREGFA- 121

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P      +M+A      +Y  DN                   
Sbjct: 122 WSGRGVIQWKQKWPKWTPP-----NEMVARQPVLAKYSADNGGM---------------- 160

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  F +  +    +H +PE           +SGCVR
Sbjct: 161 ------------PPGLDNPLGARALYIFQNGQDTLYRVHGSPEWQSIGK---AVSSGCVR 205

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   +   +P
Sbjct: 206 LINQDVIDLYDRVRNKSP 223


>gi|163938674|ref|YP_001643558.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229010181|ref|ZP_04167391.1| hypothetical protein bmyco0001_6460 [Bacillus mycoides DSM 2048]
 gi|229131696|ref|ZP_04260573.1| hypothetical protein bcere0014_6490 [Bacillus cereus BDRD-ST196]
 gi|163860871|gb|ABY41930.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228651750|gb|EEL07710.1| hypothetical protein bcere0014_6490 [Bacillus cereus BDRD-ST196]
 gi|228751031|gb|EEM00847.1| hypothetical protein bmyco0001_6460 [Bacillus mycoides DSM 2048]
          Length = 253

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +    +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKKE-YAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|47564689|ref|ZP_00235733.1| protein erfK/srfK precursor [Bacillus cereus G9241]
 gi|47558062|gb|EAL16386.1| protein erfK/srfK precursor [Bacillus cereus G9241]
          Length = 253

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 40/156 (25%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   ENG       V  GR    TP  +  I                 
Sbjct: 23  DHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGNFCIITKF------------- 69

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                   ++ +Y   +   +                                N + +  
Sbjct: 70  --------KNKEY---HRKKIAGGA--------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +N   +H T       +     ++GC+R+ +
Sbjct: 93  LGL-DKNEYAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|221638634|ref|YP_002524896.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides KD131]
 gi|332557655|ref|ZP_08411977.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides WS8N]
 gi|221159415|gb|ACM00395.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|332275367|gb|EGJ20682.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides WS8N]
          Length = 180

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 41/158 (25%), Gaps = 44/158 (27%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   E+G V  R    +        +  +RI R +  P W    ++  +D          
Sbjct: 61  LFWSEDGTVHRRYPAAMPDTRAFPRLGGTRIIRKVEGPTWRPTPAMRARD---------- 110

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                                        P   +   PG  N   +  +    ++   +H
Sbjct: 111 -----------------------------PELPWSLPPGPGNPFGTHALHLEWQH-YRIH 140

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            T +P     V      GC+ + N   +       T  
Sbjct: 141 GTHDPSTIGGVTA---HGCIGLSNAH-IAELFAHTTVG 174


>gi|188582769|ref|YP_001926214.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179346267|gb|ACB81679.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 199

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 46/182 (25%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K     ++++     L  V  G   +R  V VGR    +      I      
Sbjct: 57  RETVAYAGKEKPGTIVISTSQRRLYYVLGGGEAIRYGVGVGRRG-FSWSGTKTITGKKEW 115

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 116 PAWRPPSQMLARR---------------------------------------PDLPRYMA 136

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
            G+ N + +  +   S     +H + EP          +SGC+R+ N  ++DL   +   
Sbjct: 137 GGQDNPLGARAMYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTNKDVVDLYDRVRVG 192

Query: 360 TP 361
           T 
Sbjct: 193 TK 194


>gi|229541523|ref|ZP_04430583.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
 gi|229325943|gb|EEN91618.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
          Length = 478

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    ++  ++  ++ L   G           FD   E+AVK FQ   GL  +G ++  T
Sbjct: 391 LKKDMNNTQIKTAQQMLKSLGF--SPGREDGYFDIQTENAVKAFQFDKGLPVTGSINQKT 448

Query: 162 LEAMNVP 168
            + M   
Sbjct: 449 ADEMEKS 455


>gi|27376135|ref|NP_767664.1| hypothetical protein bll1024 [Bradyrhizobium japonicum USDA 110]
 gi|27349274|dbj|BAC46289.1| bll1024 [Bradyrhizobium japonicum USDA 110]
          Length = 197

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 53/204 (25%), Gaps = 48/204 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
           V     QL+    +             ++++     L  V+ G   +R  + VGR   Q 
Sbjct: 38  VADDAYQLEPEWQKQVVYFRTTETPGTIIISTAERHLYLVQPGGRAIRYGIGVGRDGFQ- 96

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  +IQ+                                   
Sbjct: 97  WQGLVNITNKKEWPDWTPPPEMIQRQ---------------------------------- 122

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
                P        G  N + +  +        Y +H T  P          +SGC R+ 
Sbjct: 123 -----PYLPRFMAGGPGNPLGARAMYL--GTTVYRIHGTNRPDTIGTK---VSSGCFRLV 172

Query: 348 N--IIDLDVWLLKDTPTWSRYHIE 369
           N  + DL   +   T    R   E
Sbjct: 173 NNDVADLYDRVPVGTKVVIRQKPE 196


>gi|260548891|ref|ZP_05823113.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
 gi|260408059|gb|EEX01530.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. RUH2624]
          Length = 167

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVSEDALVYLSEQ 164


>gi|260460966|ref|ZP_05809215.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033000|gb|EEW34262.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 256

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 57/171 (33%), Gaps = 45/171 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V++    L  V+ G   +R  V +G+ D       + I      P W  P  +IQ+  
Sbjct: 122 IVVHLKERMLYLVQPGGDAIRYGVGIGK-DGFRWSGRANIQYGREWPTWTPPPEMIQRK- 179

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                       E V W           Q  G  N + +  +  
Sbjct: 180 ---------------------------PELVKWQGG--------QPGGLTNPLGARALYI 204

Query: 316 YSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           Y         +H +PE       +   +SGCVR+  ++IIDL   + K  P
Sbjct: 205 YQDGKDTGYRIHGSPEWWSIGQAM---SSGCVRLINQDIIDLYSRVSKKNP 252


>gi|254476194|ref|ZP_05089580.1| Putative peptidoglycan binding domain protein [Ruegeria sp. R11]
 gi|214030437|gb|EEB71272.1| Putative peptidoglycan binding domain protein [Ruegeria sp. R11]
          Length = 424

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 2/94 (2%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  ++ +L   G L  +   S   DA    A+  FQ    L PSG VD   ++ +   
Sbjct: 279 EDIAEVQTQLAALGYL--NAPASGTLDAATRRAISRFQADQNLVPSGEVDFDLIDRLGEK 336

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
              R               +   G R  LV  P 
Sbjct: 337 TATRQETAPAGAKPAVAPAKTPSGTRRALVPKPQ 370


>gi|169632527|ref|YP_001706263.1| hypothetical protein ABSDF0653 [Acinetobacter baumannii SDF]
 gi|184159373|ref|YP_001847712.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU]
 gi|239501781|ref|ZP_04661091.1| hypothetical protein AbauAB_05656 [Acinetobacter baumannii AB900]
 gi|260557219|ref|ZP_05829435.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC
           19606]
 gi|332876213|ref|ZP_08443988.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
 gi|169151319|emb|CAP00030.1| conserved hypothetical protein [Acinetobacter baumannii]
 gi|183210967|gb|ACC58365.1| hypothetical protein ACICU_03053 [Acinetobacter baumannii ACICU]
 gi|193078252|gb|ABO13212.2| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978]
 gi|260409325|gb|EEX02627.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii ATCC
           19606]
 gi|322509285|gb|ADX04739.1| Putative uncharacterized protein [Acinetobacter baumannii 1656-2]
 gi|323519313|gb|ADX93694.1| hypothetical protein ABTW07_3274 [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332735485|gb|EGJ66537.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6014059]
          Length = 167

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVSEDALVYLSEQ 164


>gi|169794854|ref|YP_001712647.1| hypothetical protein ABAYE0680 [Acinetobacter baumannii AYE]
 gi|213157819|ref|YP_002320617.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057]
 gi|215482401|ref|YP_002324583.1| hypothetical protein ABBFA_000659 [Acinetobacter baumannii
           AB307-0294]
 gi|301348125|ref|ZP_07228866.1| hypothetical protein AbauAB0_17806 [Acinetobacter baumannii AB056]
 gi|301513350|ref|ZP_07238587.1| hypothetical protein AbauAB05_17256 [Acinetobacter baumannii AB058]
 gi|301596943|ref|ZP_07241951.1| hypothetical protein AbauAB059_14032 [Acinetobacter baumannii
           AB059]
 gi|332852308|ref|ZP_08434113.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332870531|ref|ZP_08439295.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
 gi|169147781|emb|CAM85644.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|213056979|gb|ACJ41881.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter baumannii AB0057]
 gi|213986475|gb|ACJ56774.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
 gi|332729438|gb|EGJ60778.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013150]
 gi|332732268|gb|EGJ63536.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter baumannii 6013113]
          Length = 167

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVSEDALVYLSEQ 164


>gi|126642830|ref|YP_001085814.1| hypothetical protein A1S_2806 [Acinetobacter baumannii ATCC 17978]
          Length = 138

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  II+L   + +D   +    
Sbjct: 90  IYIHGTPDKEPMGVPM---SHGCIRMRNEEIIELFDLVSEDALVYLSEQ 135


>gi|312116053|ref|YP_004013649.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221182|gb|ADP72550.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 251

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 57/201 (28%), Gaps = 48/201 (23%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
               Q   +  ++V+  +  L  V  GK      + VGR D  T     RI RI   P W
Sbjct: 79  IYFNQNEEVGSIIVDTQSRKLYFVLPGKRAYEYPISVGR-DGFTWSGTERITRIAEWPSW 137

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P+ + ++                                        P        G 
Sbjct: 138 TPPQEMHKRQ---------------------------------------PGLPITVSGGL 158

Query: 305 INAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
            N   +  +   +    Y +H T             +SGC R++N  +  V L       
Sbjct: 159 RNPQGARALYLGN--TVYRIHGTNNERTVGQAN---SSGCFRLKN--EHVVHLASIAKVG 211

Query: 364 SRYHIEEVVKTRKTTPVKLAT 384
           ++  + +      +    L++
Sbjct: 212 TKVKVLQAYTGGVSQSAPLSS 232


>gi|94499507|ref|ZP_01306044.1| hypothetical protein RED65_00700 [Oceanobacter sp. RED65]
 gi|94428261|gb|EAT13234.1| hypothetical protein RED65_00700 [Oceanobacter sp. RED65]
          Length = 160

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 8/53 (15%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
            N + +           Y+H TP+           + GC+R+RN  +I+L  W
Sbjct: 102 KNRLGNVDTM---ARYIYIHGTPDTEAMGQ---ALSHGCIRMRNDDVIELFDW 148


>gi|305673895|ref|YP_003865567.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|305412139|gb|ADM37258.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 207

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 109 VSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            +V++++  L         K    G+   +      AV+ FQ+ +GL   G+    T   
Sbjct: 142 DAVEQIQTALAALHFYPDKKAKNFGIDSYYGPQTADAVRRFQLMYGLSADGIYGPKTKAK 201

Query: 165 MNV 167
           +  
Sbjct: 202 IEA 204


>gi|302333033|gb|ADL23226.1| serine protease [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 496

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G    ++     FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGYKVDNET--TQFDQALENQVKAFQQTNKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|86748292|ref|YP_484788.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86571320|gb|ABD05877.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 224

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 296 FIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN--II 350
                  G  N + +  +     +R+  + +H T +P          +SGC+R+ N  +I
Sbjct: 131 LPASVPGGVDNPLGARALYLYQGNRDTLFRIHGTNQPEYIGAS---ISSGCIRMTNEDVI 187

Query: 351 DLDVWLLKDT 360
           DL   +   T
Sbjct: 188 DLYTRVKNGT 197


>gi|304405010|ref|ZP_07386670.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
 gi|304345889|gb|EFM11723.1| carboxyl-terminal protease [Paenibacillus curdlanolyticus YK9]
          Length = 478

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 9/101 (8%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             +  +  Y ++ +      LP    L  G+   +V+ L++ L   G           FD
Sbjct: 366 NVKVELPAYTELAA------LPTDSVLKKGDYGDAVKTLQQMLQALGY-SIKGATEGVFD 418

Query: 136 AYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRIRQ 175
              ++AV+  Q    +    G V  ST   +   +  ++ +
Sbjct: 419 GVTDAAVRQLQQVESIQPADGQVRESTTTRIMELLRDKLEK 459


>gi|296447750|ref|ZP_06889665.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296254727|gb|EFH01839.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 260

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 6/91 (6%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
                +  I  K +              P+       G  N + +  +         +H 
Sbjct: 163 FTWTGVKPITRKAQWPDWTPPSEMLARRPDLPRHMAGGPANPLGARALYLGGS-LYRIHG 221

Query: 326 TPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           T EP          +SGC+R+   ++IDL  
Sbjct: 222 TNEPYTIGQN---VSSGCIRMMNEDVIDLYD 249


>gi|229137557|ref|ZP_04266164.1| hypothetical protein bcere0013_6870 [Bacillus cereus BDRD-ST26]
 gi|228645917|gb|EEL02144.1| hypothetical protein bcere0013_6870 [Bacillus cereus BDRD-ST26]
          Length = 219

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKYKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|331084634|ref|ZP_08333722.1| hypothetical protein HMPREF0987_00025 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410728|gb|EGG90150.1| hypothetical protein HMPREF0987_00025 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 128

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G+S   V++++E L +I+G         +   +     ++VK FQ   GL  +
Sbjct: 44  PGYVLENGSSGNKVRQMQEELNVIAGAYPAIPKITVDGIYGPATAASVKKFQSVFGLPAT 103

Query: 155 GMVDSSTL 162
           G VD  T 
Sbjct: 104 GTVDYRTW 111


>gi|229171536|ref|ZP_04299116.1| hypothetical protein bcere0006_6610 [Bacillus cereus MM3]
 gi|228611924|gb|EEK69166.1| hypothetical protein bcere0006_6610 [Bacillus cereus MM3]
          Length = 254

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 38/156 (24%), Gaps = 54/156 (34%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQ 252
              +LVN+    L   ENG       V  GR    TP     I                 
Sbjct: 23  DHLILVNLTTNQLSFFENGNYTKTFPVTTGRDRTPTPEGSFCIITKF------------- 69

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                   ++ +Y   +   +                                N + +  
Sbjct: 70  --------KNKEY---HRKKIAGGA--------------------------PNNPLGTRW 92

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +    +    +H T       +     ++GC+R+ +
Sbjct: 93  LGLDKKE-YAIHGTNREWTIGSRE---SNGCIRMHD 124


>gi|90420598|ref|ZP_01228505.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335326|gb|EAS49079.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 245

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 8/121 (6%)

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--Y 316
            R    +  D NI       K     E+    P+   +    DPG  N + +  +     
Sbjct: 128 GRAGFSWAGDANIRAKRSWPKWFPPAEMIDRKPDLEPYRDGMDPGLTNPLGARALYLYQN 187

Query: 317 SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVK 373
            ++  + +H TPE           +SGC+R+  ++IIDL   +  D     +   E +  
Sbjct: 188 GKDTLFRLHGTPEWWTIGT---AASSGCIRLMNQDIIDLYERVPMDARVVVKQGKERLAA 244

Query: 374 T 374
            
Sbjct: 245 R 245


>gi|329922728|ref|ZP_08278280.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
 gi|328942070|gb|EGG38353.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
          Length = 103

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 11/73 (15%)

Query: 304 KINAMASTKIEFYSR------NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             N +    +    +          +H      L      + ++GC+R+ N      WL 
Sbjct: 36  PRNPLGDRWLGINVKVNGRTSYAYAIHGNNNANLIGK---YVSAGCIRMHNKD--VRWLY 90

Query: 358 KDTPTWSRYHIEE 370
                 +   I++
Sbjct: 91  DKVKMNTPVLIQK 103


>gi|30023067|ref|NP_834698.1| protein erfK/srfK precursor [Bacillus cereus ATCC 14579]
 gi|229049719|ref|ZP_04194276.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH676]
 gi|229112475|ref|ZP_04242012.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock1-15]
 gi|229130287|ref|ZP_04259246.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-Cer4]
 gi|229147579|ref|ZP_04275924.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST24]
 gi|29898627|gb|AAP11899.1| Protein erfK/srfK precursor [Bacillus cereus ATCC 14579]
 gi|228635869|gb|EEK92354.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-ST24]
 gi|228653220|gb|EEL09099.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus BDRD-Cer4]
 gi|228670855|gb|EEL26162.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock1-15]
 gi|228722632|gb|EEL74020.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH676]
          Length = 153

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|49473972|ref|YP_032014.1| hypothetical protein BQ03270 [Bartonella quintana str. Toulouse]
 gi|49239475|emb|CAF25827.1| hypothetical protein BQ03270 [Bartonella quintana str. Toulouse]
          Length = 258

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 301 DPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            PG  N + +  +  F +  +T   +H + E        R  +SGC+R+  ++IIDL   
Sbjct: 162 PPGPDNPLGARALYLFRNGKDTLFRIHGSNESWSIG---RAISSGCIRLLNQDIIDLYDR 218

Query: 356 LLKDT 360
           +    
Sbjct: 219 VPNGA 223


>gi|115526343|ref|YP_783254.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisA53]
 gi|115520290|gb|ABJ08274.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 228

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 6/56 (10%)

Query: 296 FIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
                  G  N + +  +     +R+  + +H T +P          +SGC+R+ N
Sbjct: 132 LPASVPGGVDNPLGARALYLYQGNRDTLFRIHGTNQPEYIGAS---ISSGCIRMTN 184


>gi|254481176|ref|ZP_05094421.1| Putative peptidoglycan binding domain protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038339|gb|EEB79001.1| Putative peptidoglycan binding domain protein [marine gamma
           proteobacterium HTCC2148]
          Length = 560

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+SS +V  + + L    D       +  F+  ++  V LFQ   GL+  G++   T
Sbjct: 474 LAEGDSSPAVGEVAQ-LFARLDGQAQALTANRFNEALKQRVMLFQGAQGLEADGVIGVQT 532

Query: 162 L 162
           L
Sbjct: 533 L 533


>gi|240140080|ref|YP_002964557.1| hypothetical protein MexAM1_META1p3546 [Methylobacterium extorquens
           AM1]
 gi|254562503|ref|YP_003069598.1| hypothetical protein METDI4121 [Methylobacterium extorquens DM4]
 gi|240010054|gb|ACS41280.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           precursor [Methylobacterium extorquens AM1]
 gi|254269781|emb|CAX25754.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           precursor [Methylobacterium extorquens DM4]
          Length = 199

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K     ++++     L  V  G   +R  V VGR    +      +      
Sbjct: 57  RDTVAYAGKEKPGTIVISTSQRRLYYVLGGGEAIRYGVGVGRQG-FSWSGTKTVTGKKEW 115

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 116 PAWRPPAQMLARR---------------------------------------PDLPRYMA 136

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G+ N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 137 GGQDNPLGARAMYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTN 179


>gi|228923763|ref|ZP_04087041.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228835892|gb|EEM81255.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 153

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|228938016|ref|ZP_04100637.1| hypothetical protein bthur0008_6870 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970892|ref|ZP_04131529.1| hypothetical protein bthur0003_6770 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977496|ref|ZP_04137888.1| hypothetical protein bthur0002_7100 [Bacillus thuringiensis Bt407]
 gi|228782140|gb|EEM30326.1| hypothetical protein bthur0002_7100 [Bacillus thuringiensis Bt407]
 gi|228788701|gb|EEM36643.1| hypothetical protein bthur0003_6770 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821642|gb|EEM67646.1| hypothetical protein bthur0008_6870 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938520|gb|AEA14416.1| protein erfK/srfK precursor [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 253

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 67  TKFKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|75675235|ref|YP_317656.1| N-acetylmuramoyl-L-alanine amidase [Nitrobacter winogradskyi
           Nb-255]
 gi|74420105|gb|ABA04304.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Nitrobacter
           winogradskyi Nb-255]
          Length = 283

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 8/96 (8%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L  G+    V+ L++ L   G        +  FD      V  FQ 
Sbjct: 191 GHWIRPAPIVAGEVLKTGSEGDDVRALQQSLARYGY---GIKATGKFDTATMEVVTAFQR 247

Query: 148 RHG-LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
                   G+ D STL  ++  +D    Q   N +R
Sbjct: 248 HFRPAKVDGIADQSTLTTLHALLDSLPAQKASNGIR 283


>gi|75763270|ref|ZP_00743021.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218895804|ref|YP_002444215.1| hypothetical protein BCG9842_B4524 [Bacillus cereus G9842]
 gi|228963852|ref|ZP_04124988.1| hypothetical protein bthur0004_7170 [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|74489238|gb|EAO52703.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|218543417|gb|ACK95811.1| conserved domain protein [Bacillus cereus G9842]
 gi|228795831|gb|EEM43303.1| hypothetical protein bthur0004_7170 [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 253

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 67  TKFKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|281412542|ref|YP_003346621.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10]
 gi|281373645|gb|ADA67207.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga naphthophila RKU-10]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 11/70 (15%)

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KE+      +     P           N + +  ++  +     +H T +P         
Sbjct: 294 KEIDPALYWFGEYISPRTPL-------NGLGTRYLQLSNP-TYAIHGTSKPWEIGKR--- 342

Query: 339 ETSGCVRVRN 348
            + GC+R+ N
Sbjct: 343 ISHGCIRMFN 352


>gi|209972932|ref|YP_002300379.1| gp19.3 [Bacillus phage SPO1]
 gi|209871252|gb|ACI91008.1| gp19.3 [Bacillus phage SPO1]
          Length = 343

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L  G++S +V+ ++E+L  +G           F A  ESA+K FQ   G+   G+   
Sbjct: 179 LSKGDNSSAVKTMQEKLNAAGF--SVGKADGIFGAKTESALKAFQKSVGISADGLYGP 234



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQ-MRHGLDPSGMVDSSTLEAMNVPVDL 171
             + G+   +    + A++ +Q  + GL   G+   +T +A+   +  
Sbjct: 290 AKNNGIDGYWGPKTQDAIRRYQSTKSGLKTDGIYGPATRKALEKDLKE 337


>gi|206600022|ref|YP_002242096.1| gp39 [Mycobacterium phage Konstantine]
 gi|206287110|gb|ACI12455.1| gp39 [Mycobacterium phage Konstantine]
          Length = 321

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 102 LHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           L +G++   V ++++ +                 F   V++AV  FQ R  +   G V  
Sbjct: 181 LRIGSTGPEVLKMQKGMNAVFKNYKAMPLDEDGIFGPMVQAAVIEFQQRSLISVDGEVGP 240

Query: 160 STLEAMN 166
            T   + 
Sbjct: 241 QTKAKLA 247


>gi|323963704|gb|EGB59214.1| peptidase M23 [Escherichia coli M863]
 gi|327254961|gb|EGE66571.1| putative peptidoglycan binding domain protein [Escherichia coli
           STEC_7v]
          Length = 253

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 114 LRERLIISG---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LR  L ++G              F      AVK+FQ  +GL+  G+V   T   + VP
Sbjct: 6   LRFTLSVAGIVEMATAVVVEDGIFGKNTYDAVKIFQRYNGLNDDGIVGPQTWRKLGVP 63


>gi|261420536|ref|YP_003254218.1| carboxyl-terminal protease [Geobacillus sp. Y412MC61]
 gi|297531348|ref|YP_003672623.1| carboxyl-terminal protease [Geobacillus sp. C56-T3]
 gi|319768205|ref|YP_004133706.1| carboxyl-terminal protease [Geobacillus sp. Y412MC52]
 gi|261376993|gb|ACX79736.1| carboxyl-terminal protease [Geobacillus sp. Y412MC61]
 gi|297254600|gb|ADI28046.1| carboxyl-terminal protease [Geobacillus sp. C56-T3]
 gi|317113071|gb|ADU95563.1| carboxyl-terminal protease [Geobacillus sp. Y412MC52]
          Length = 482

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL    +   +   ++ L   G           F    E AV+ FQ  + L  +G +D 
Sbjct: 392 KPLRYDMNDEQIANAQKMLKGLGF--NPGRTDGYFSKETEQAVQAFQKANQLPVTGRIDE 449

Query: 160 STLEAMNVPVDLRIR 174
           +T + +   +   +R
Sbjct: 450 TTADVLQTKIMEAVR 464


>gi|225427816|ref|XP_002275758.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 391

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 9/92 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G +     S+  S  F+  +ES++K FQ  + L+ +G +D+
Sbjct: 183 KKGDKREGIQKVKQYLQRYGYISSTHYSQMGSDDFNDALESSLKAFQTFYHLNSTGTLDA 242

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKM 191
           +T   M+ P      +    L  +  L  ++ 
Sbjct: 243 ATATLMSRP------RYAYPLHSVPWLPPEQP 268


>gi|213586771|ref|ZP_03368597.1| hypothetical protein SentesTyph_38025 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 257

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 6/101 (5%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVND-RFDNFLARVDMGIDSDIPIISKETI 75
           YL     + +  +    S     +     S++N  +      ++ M + S  P   +   
Sbjct: 161 YLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQ--Y 218

Query: 76  AQTEKAIAFYQDILSRGGWPELP-IRPLHLGNSSVSVQRLR 115
           A    A+     +     WP+L     L  G  S  V  LR
Sbjct: 219 APMHDALLKL--VADSRPWPQLTNTATLRPGQWSNDVPALR 257


>gi|90425734|ref|YP_534104.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90107748|gb|ABD89785.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 191

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 45/175 (25%), Gaps = 46/175 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R             + ++     L  +  G   LR  + VGR D        RI      
Sbjct: 49  RTTVNFASNYAPGTIYIDTAERRLYLILQGGQALRYGIGVGR-DGFRWGGVHRITAKKEW 107

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 108 PSWTPPSQMLRRR---------------------------------------PDLPRHMA 128

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
            G  N + +  +         +H + EP          +SGC R+ N  + DL  
Sbjct: 129 GGIDNPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTNEDVQDLYD 179


>gi|323438436|gb|EGA96190.1| carboxy-terminal processing proteinase [Staphylococcus aureus O11]
 gi|323444074|gb|EGB01685.1| carboxy-terminal processing proteinase [Staphylococcus aureus O46]
          Length = 496

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G    ++     FD  +E+ +K FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSALGYKVDNET--TQFDQALENQIKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|206970115|ref|ZP_03231068.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218232518|ref|YP_002369837.1| hypothetical protein BCB4264_A5178 [Bacillus cereus B4264]
 gi|228942199|ref|ZP_04104739.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228955295|ref|ZP_04117303.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228961274|ref|ZP_04122893.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228975128|ref|ZP_04135687.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981767|ref|ZP_04142062.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis Bt407]
 gi|229072517|ref|ZP_04205719.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus F65185]
 gi|229082276|ref|ZP_04214739.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock4-2]
 gi|229181324|ref|ZP_04308654.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus 172560W]
 gi|229193312|ref|ZP_04320262.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus ATCC 10876]
 gi|296505469|ref|YP_003667169.1| protein ErfK/SrfK precursor [Bacillus thuringiensis BMB171]
 gi|206734692|gb|EDZ51861.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218160475|gb|ACK60467.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|228590113|gb|EEK47982.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus ATCC 10876]
 gi|228602217|gb|EEK59708.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus 172560W]
 gi|228700708|gb|EEL53231.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus Rock4-2]
 gi|228710493|gb|EEL62466.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus F65185]
 gi|228777879|gb|EEM26151.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis Bt407]
 gi|228784649|gb|EEM32669.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228798395|gb|EEM45389.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228804428|gb|EEM51039.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|228817533|gb|EEM63618.1| ErfK/YbiS/YcfS/YnhG [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|296326521|gb|ADH09449.1| protein erfK/srfK precursor [Bacillus thuringiensis BMB171]
 gi|326942851|gb|AEA18747.1| protein erfK/srfK precursor [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 153

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKAATPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|255558368|ref|XP_002520211.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223540703|gb|EEF42266.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 364

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    + +L+      G +  +    +  FD  +ESA+K +Q    L+ +G +D  T
Sbjct: 54  RAGDKLEGLSKLKNYFHYFGYIPNTLSNFTDDFDDALESAIKTYQQNFNLNVTGELDEQT 113

Query: 162 LEAMNVPVDLRIRQLQ--VNLMRIKKLLEQK 190
           L+ +  P       +     +   K      
Sbjct: 114 LDQLVRPRCGNADIINGSTTMNSGKWQTTTT 144


>gi|23099945|ref|NP_693411.1| carboxy-terminal processing protease [Oceanobacillus iheyensis
           HTE831]
 gi|22778176|dbj|BAC14446.1| carboxy-terminal processing protease [Oceanobacillus iheyensis
           HTE831]
          Length = 488

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            P  L  +S  +  ++  L   G    +      FD     AVK FQ  + L+ +G VDS
Sbjct: 399 EPFSLDETSEEIANMQVMLTGLGY--DTGRTDGYFDEQTAEAVKDFQADNDLEATGEVDS 456

Query: 160 ST 161
            T
Sbjct: 457 ET 458


>gi|300023503|ref|YP_003756114.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299525324|gb|ADJ23793.1| ErfK/YbiS/YcfS/YnhG family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 255

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 40/162 (24%), Gaps = 44/162 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++++     L  V +     R  + VG+          +I+R +  P W  
Sbjct: 102 FPNSYAPGSIVIDTAGRRLYYVLSSTTAYRYPIAVGKQGFA-WSGVEKISRKVAWPDWYP 160

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P  +  +                                        P        G  N
Sbjct: 161 PAEMRAR---------------------------------------KPGLPVHMQGGVRN 181

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  +         +H T +           +SGC+R+ N
Sbjct: 182 PLGAMALYLG-STLYRIHGTNDVSSIGT---ATSSGCIRMTN 219


>gi|333027471|ref|ZP_08455535.1| hypothetical protein STTU_4975 [Streptomyces sp. Tu6071]
 gi|332747323|gb|EGJ77764.1| hypothetical protein STTU_4975 [Streptomyces sp. Tu6071]
          Length = 317

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 242 VTQAVLRRGDSGPEVAKLEERLRAVGIYP--GRDDGRFDRGLEYALMTYQVTRGASDEHG 299

Query: 156 MVDSSTLEAMN 166
           +  + T   + 
Sbjct: 300 VYGADTRTKLE 310


>gi|302772727|ref|XP_002969781.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
 gi|302823297|ref|XP_002993302.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
 gi|300138875|gb|EFJ05627.1| hypothetical protein SELMODRAFT_3042 [Selaginella moellendorffii]
 gi|300162292|gb|EFJ28905.1| hypothetical protein SELMODRAFT_13930 [Selaginella moellendorffii]
          Length = 301

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           + +L+  L   G     +     FD   E+A+KL+Q   GL+ +G +D  T+  M  P
Sbjct: 22  LPQLKRYLQEFGYTSWEEFTPD-FDNQTEAAIKLYQSNFGLNATGTLDERTITQMMKP 78


>gi|225627605|ref|ZP_03785642.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237815558|ref|ZP_04594555.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|225617610|gb|EEH14655.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|237788856|gb|EEP63067.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
          Length = 270

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 70/208 (33%), Gaps = 18/208 (8%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV-GR 223
             V  + ++ +   N+ ++      K           A +     N     + ++    R
Sbjct: 66  SPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDPKFR 121

Query: 224 VDRQTPILHSRINRIMFNPY---WVIPRSIIQKDM-MALLRQDPQYLKDNNIHMIDEKGK 279
               T   +     ++       +++  S   +   +A+ +Q  ++     I    E  +
Sbjct: 122 PQDVTFTGYKPGTIVIDPKKRFLYLVETSTTARRYGIAVGKQGLEFQGKATISAKREWPR 181

Query: 280 EVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN-TYMHDTPEPILFNNV 335
            +   E ++ +      F    D G  N + S  +     +++    +H T +P    + 
Sbjct: 182 WIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS 241

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDTP 361
               ++GC R+   +++DL   +   T 
Sbjct: 242 ---ASNGCFRMINEDVMDLYDRVTLGTE 266


>gi|163760769|ref|ZP_02167849.1| LysM-repeat protein and domain [Hoeflea phototrophica DFL-43]
 gi|162282091|gb|EDQ32382.1| LysM-repeat protein and domain [Hoeflea phototrophica DFL-43]
          Length = 98

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRE-RLIISG-DLDPS-KGLSVAFDAYVESAVKLFQMRHGLDPS 154
               L  G++   V  L+   L ++G D       +   F    E+AVK +Q +  L   
Sbjct: 3   SSPTLSKGSAGEDVSALQHGLLQVAGADTPTDPGPIDGKFGQKTEAAVKAYQTQLKLKAD 62

Query: 155 GMVDSSTL 162
           G+V   T 
Sbjct: 63  GIVGDLTW 70


>gi|163732993|ref|ZP_02140437.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161393528|gb|EDQ17853.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 203

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 49/206 (23%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGK 212
           G V+SS        +   +R+   +   +        +    +LV+I + +L    E G 
Sbjct: 32  GSVNSSGTTQGERDLTESVRRNISSFRTLDWQPYFSDLRKGAILVDIDSRALHYWAEGGD 91

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                   V   +  T    ++I R +  P W    S+        L ++P         
Sbjct: 92  FYKLYPSSVPLSEELTRRGRTKIVRKVEGPSWRPTPSM--------LERNP--------- 134

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPIL 331
                         DW             PG  N M +  +        Y +H T +   
Sbjct: 135 --------------DW--------PEFIGPGPDNPMGTHALYLS--WTYYRIHGTHDTRK 170

Query: 332 FNNVVRFETSGCVRV--RNIIDLDVW 355
                R  ++GC+ +   +I +L   
Sbjct: 171 IG---RQSSNGCIGLFNEHIAELFEL 193


>gi|1402944|emb|CAA66987.1| orfRM1 [Bacillus subtilis]
          Length = 466

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++  +V+  ++ L   G       ++  +D    S VK FQ +  L+ +G++
Sbjct: 376 ADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSMYDQDFVSVVKQFQKKEKLNETGIL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T   + + +  ++      + +
Sbjct: 433 TGDTTTKLMIELQKKLSDNDTQMEK 457


>gi|16079017|ref|NP_389840.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221309859|ref|ZP_03591706.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314182|ref|ZP_03595987.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319105|ref|ZP_03600399.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323378|ref|ZP_03604672.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81669151|sp|O34666|CTPA_BACSU RecName: Full=Carboxy-terminal processing protease CtpA;
           Short=C-terminal processing protease; Flags: Precursor
 gi|2415395|gb|AAB72063.1| proteinase [Bacillus subtilis]
 gi|2529476|gb|AAB81168.1| OrfRM1 [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634351|emb|CAB13850.1| carboxy-terminal processing protease [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 466

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G++  +V+  ++ L   G       ++  +D    S VK FQ +  L+ +G++
Sbjct: 376 ADKTYKSGDTGTNVKVAQKMLKALGY---KVKVNSMYDQDFVSVVKQFQKKEKLNETGIL 432

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T   + + +  ++      + +
Sbjct: 433 TGDTTTKLMIELQKKLSDNDTQMEK 457


>gi|313113431|ref|ZP_07799020.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624158|gb|EFQ07524.1| conserved hypothetical protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 230

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
            AR         P+    T    ++    Y      G     P   L  G+    V  L+
Sbjct: 112 AARGTGAWGYVEPLSQTPTWVHMDR---RYGTPACSGTTAGYP--TLRRGSRGCYVMILQ 166

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + L   G       +   F A  E A+K FQ R  L   G+   S+ + ++ 
Sbjct: 167 DALSTLGY-QTGSRIDGIFGARTEEALKGFQRRTSLRVDGVCGCSSWKKIST 217


>gi|260433867|ref|ZP_05787838.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417695|gb|EEX10954.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 198

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 56/198 (28%), Gaps = 47/198 (23%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
               + V   +R+   +  +         +G+  +L +I + ++               V
Sbjct: 35  SEDAISVQPPVRRNISSFSQQNWQDHFDEIGVGCLLADITSRAVHYWGPDGTYKLYPSSV 94

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              +  T   ++ + R   NP W    S+ ++D                           
Sbjct: 95  PMSEELTKRGYTEVVRKAENPSWTPTPSMRERD--------------------------- 127

Query: 282 FVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                       P    R + G   N + +  +         +H T +        R  +
Sbjct: 128 ------------PTLPQRIEGGDPGNPLGTRAMYLSWP-AYLVHGTHDTRKIG---RQSS 171

Query: 341 SGCVRVRN--IIDLDVWL 356
           SGC+ + N  + +L   +
Sbjct: 172 SGCIGLYNQHVEELYPLV 189


>gi|222099847|ref|YP_002534415.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga neapolitana DSM
           4359]
 gi|221572237|gb|ACM23049.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga neapolitana DSM
           4359]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 11/70 (15%)

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KE+      +     P           N + +  ++  +     +H T +P         
Sbjct: 287 KEIDPALYWFGEYISPRTPL-------NGLGTRYLQLSNP-TYAIHGTSKPWEIGKR--- 335

Query: 339 ETSGCVRVRN 348
            + GC+R+ N
Sbjct: 336 ISHGCIRMFN 345


>gi|166366413|ref|YP_001658686.1| hypothetical protein MAE_36720 [Microcystis aeruginosa NIES-843]
 gi|166088786|dbj|BAG03494.1| hypothetical protein MAE_36720 [Microcystis aeruginosa NIES-843]
          Length = 417

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 9/110 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--GLDPSGMVDS 159
           L +G+  + V +L+ +L   G       +   F    + AV+ FQ  H    + +G+VD 
Sbjct: 169 LQVGSQGLQVGQLQAKLNEIGF--NCGRVDKIFGPKTKQAVENFQRDHLGESEVTGIVDE 226

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
            T   +     +R   + ++                     P   +  ++
Sbjct: 227 RTWNQIMDHPSVRPASVLIDPGHSPIHSGTDAKD-----GTPEYEMNLLQ 271


>gi|168051500|ref|XP_001778192.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670405|gb|EDQ56974.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 529

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R +  G     V+ L+E L   G     + +    F    E+AVK +Q   G+   G++ 
Sbjct: 302 REMRKGAEGDEVKELQEALQELGFYSGEEDIEYSMFADGTETAVKTWQASIGVREDGVLS 361

Query: 159 SSTLEAMNVPVDLRIRQ 175
              L  +        + 
Sbjct: 362 PELLAMLLSKTQTNAKS 378


>gi|328957708|ref|YP_004375094.1| N-acetylmuramoyl-L-alanine amidase [Carnobacterium sp. 17-4]
 gi|328674032|gb|AEB30078.1| N-acetylmuramoyl-L-alanine amidase [Carnobacterium sp. 17-4]
          Length = 367

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 22/74 (29%), Gaps = 4/74 (5%)

Query: 91  RGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            G W          L  G S   V  ++  LI              +      AVK FQ+
Sbjct: 289 DGYWGPESASKMRILKTGFSGSDVYVVQAFLI-GNYHLKLGTPDKQYGPKTTEAVKQFQL 347

Query: 148 RHGLDPSGMVDSST 161
             GL   G+    T
Sbjct: 348 NSGLLADGITGPKT 361


>gi|323137949|ref|ZP_08073023.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322396668|gb|EFX99195.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 189

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 13/93 (13%)

Query: 277 KGKEVFVEEVDWN-----SPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPI 330
            GK +     DW+       + P        G   N M +  I     +   +H T   +
Sbjct: 97  SGKYINP---DWSPPPCVKADHPELPDIIPGGAPGNPMGARAITLDRLH-IAIHGTSRKM 152

Query: 331 LFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             +      + GC+R+   ++IDL   +    P
Sbjct: 153 RRSIGT-AASYGCIRMLNEDVIDLFDRVRIGAP 184


>gi|190889695|ref|YP_001976237.1| hypothetical protein RHECIAT_CH0000056 [Rhizobium etli CIAT 652]
 gi|218514175|ref|ZP_03511015.1| hypothetical protein Retl8_10937 [Rhizobium etli 8C-3]
 gi|190694974|gb|ACE89059.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
 gi|327192230|gb|EGE59196.1| hypothetical protein RHECNPAF_234005 [Rhizobium etli CNPAF512]
          Length = 227

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 45/198 (22%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +A      + I +++    R     +       ++VN     L  +      +R  + 
Sbjct: 52  TKDAGYSLPAIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIG 111

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+         + +      P W  P+ + ++     + +          ++ D  G  
Sbjct: 112 VGKQGFA-WAGTAYVAWKQEWPTWHPPKEMAERR--PDVAK----------YVEDGMG-- 156

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVV 336
                                PG  N + +  +  ++ +       +H TPE        
Sbjct: 157 ---------------------PGLTNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGT-- 193

Query: 337 RFETSGCVRV--RNIIDL 352
              +SGC+R+  +++IDL
Sbjct: 194 -AASSGCIRLMNQDVIDL 210


>gi|255654572|ref|ZP_05399981.1| putative spore cortex-lytic enzyme pre-pro-form (putative spore
           peptidoglycan hydrolase) [Clostridium difficile
           QCD-23m63]
 gi|296449345|ref|ZP_06891127.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP08]
 gi|296880721|ref|ZP_06904673.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP07]
 gi|296261815|gb|EFH08628.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP08]
 gi|296428294|gb|EFH14189.1| spore cortex-lytic enzyme SleC [Clostridium difficile NAP07]
          Length = 423

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAV 142
           +  +  G     P   L +G+S   V+ ++ +L  IS        +     +    E+AV
Sbjct: 324 RAPIVSGVPVSFPGTTLQVGSSGQYVRTIQNQLNAISNSYPAVPKVIEDGIYGTDTENAV 383

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++FQ   GL  SG+VD  T   ++ 
Sbjct: 384 RIFQGIFGLPQSGVVDFKTWYEISR 408


>gi|157692648|ref|YP_001487110.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157681406|gb|ABV62550.1| S41 family carboxy-terminal processing peptidase [Bacillus pumilus
           SAFR-032]
          Length = 461

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +   L +S   V+  ++              +  +D   ++ VK FQ  + L   G++
Sbjct: 370 PKKTYQLNDSGDEVKAAQKMFQALDY---KAKANGEYDQAFQAIVKKFQTDNDLKADGIL 426

Query: 158 DSSTLEAMNVPVDLRIR 174
              T   +   +  +++
Sbjct: 427 TGDTTTVLMTKIQDKLK 443


>gi|119493547|ref|ZP_01624212.1| hypothetical protein L8106_25887 [Lyngbya sp. PCC 8106]
 gi|119452601|gb|EAW33783.1| hypothetical protein L8106_25887 [Lyngbya sp. PCC 8106]
          Length = 194

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSG 155
           + +  L LG +  +V+  ++RL+ +G      G +  +   +++A++ FQ  + GL   G
Sbjct: 36  VELPVLSLGVAGEAVRFAQQRLMANGY---RIGFNGQYGPQMKAAIEHFQAYYGGLVVDG 92

Query: 156 MVDSSTLE 163
           ++  +T  
Sbjct: 93  ILGENTWR 100



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           + +  L+ G+   +V+ L+ RL   G    S  +   F      AV++FQ R  L   G+
Sbjct: 127 VNMSELNQGHVGDAVECLQLRLYAQGF---SLFIDGDFGLRTREAVEVFQRRESLKIDGI 183

Query: 157 VDSSTLEAMN 166
           V   T   + 
Sbjct: 184 VGVQTWRKLG 193


>gi|159898673|ref|YP_001544920.1| N-acetylmuramoyl-L-alanine amidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891712|gb|ABX04792.1| N-acetylmuramoyl-L-alanine amidase family 2 [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 356

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 4/77 (5%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            ++    W +L +  L  G++  +V+ L+ +L +         +  +F   V + V+ FQ
Sbjct: 280 GVVGAATWEKLIM-TLRSGDTGEAVKALQNQLTVQSY---PTTIDGSFGTGVNTLVRAFQ 335

Query: 147 MRHGLDPSGMVDSSTLE 163
               L   G+V  ++  
Sbjct: 336 TNRQLTVDGVVGLNSWN 352



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 15/79 (18%)

Query: 94  WPEL----PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           WP L    P   L           LR R         +     AF    E+AVK FQ  +
Sbjct: 226 WPILRRNTPATGLAKTMQY----LLRAR-------GATITADGAFGPGTETAVKSFQTAN 274

Query: 150 GLDPSGMVDSSTLEAMNVP 168
           GL   G+V ++T E + + 
Sbjct: 275 GLTSDGVVGAATWEKLIMT 293


>gi|302534605|ref|ZP_07286947.1| predicted protein [Streptomyces sp. C]
 gi|302443500|gb|EFL15316.1| predicted protein [Streptomyces sp. C]
          Length = 283

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 6/75 (8%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-----GLDPSGMV 157
             G +   V  L++ LI +G       ++  +    + AV  F  R+     GL     +
Sbjct: 210 KPGATHAQVAELQQLLIKAGYGPIKGAVTRFYGPETQRAVARFHDRNPAYRSGLH-DPRI 268

Query: 158 DSSTLEAMNVPVDLR 172
                 A+      R
Sbjct: 269 GPKGFVALQKQAGRR 283


>gi|110677797|ref|YP_680804.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
 gi|109453913|gb|ABG30118.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
          Length = 203

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 47/197 (23%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGK 212
           G V+S+        +   +R+   +   +        +    +LV+I + +L    E G 
Sbjct: 32  GSVNSAGTTQGERDLTETVRRNISSFRTLDWQPYFSDLRRGAILVDIDSRALHYWAEGGD 91

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
                   V   +  T    ++I R +  P W    S+        L ++P         
Sbjct: 92  FYKLYPSSVPLSEELTRRGRTKIVRKVEGPSWRPTPSM--------LERNP--------- 134

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPIL 331
                         DW             PG  N M +  +        Y +H T +   
Sbjct: 135 --------------DW--------PEFIGPGPDNPMGTHALYLS--WTYYRIHGTHDTRK 170

Query: 332 FNNVVRFETSGCVRVRN 348
                R  ++GC+ + N
Sbjct: 171 IG---RQSSNGCIGLFN 184


>gi|90418402|ref|ZP_01226314.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90338074|gb|EAS51725.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 517

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ L++RL   G       +     A   +A++ +Q  +GL+ +G V  +   A+
Sbjct: 455 VRALQQRLETLGY--SPGTVDGVLGASTRAAIRAYQRDNGLEVTGEVTPALAGAL 507


>gi|86355721|ref|YP_467613.1| hypothetical protein RHE_CH00053 [Rhizobium etli CFN 42]
 gi|86279823|gb|ABC88886.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 227

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 45/198 (22%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +A      + I +++    R     +       ++VN     L  +      +R  + 
Sbjct: 52  TKDAGYSLPAIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILPNGKAMRYGIG 111

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+         + +      P W  P     K+M        +Y+++            
Sbjct: 112 VGKQGFA-WAGTAYVAWKQEWPTWHPP-----KEMAERRPDVAKYVEEG----------- 154

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVV 336
                                PG  N + +  +  ++ +       +H TPE        
Sbjct: 155 -------------------MGPGLSNPLGARAMYLFNDDGKDTLFRLHGTPEWASIGT-- 193

Query: 337 RFETSGCVRV--RNIIDL 352
              +SGC+R+  +++IDL
Sbjct: 194 -AASSGCIRLMNQDVIDL 210


>gi|328880760|emb|CCA53999.1| hypothetical protein SVEN_0712 [Streptomyces venezuelae ATCC 10712]
          Length = 134

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQ 146
           +   WP +P   L  G+    V+ L+  LI +  +D +  +      F    E+AV  FQ
Sbjct: 48  AYNDWP-VPAVDLARGSRGDCVRALQWALIRTNFVDSADVMTFIDGDFGPKTEAAVLRFQ 106

Query: 147 MRH----GLDPSGMVDSSTL 162
            R+    G    G+V   T 
Sbjct: 107 SRYPRETGGP-DGIVGIKTW 125


>gi|255554154|ref|XP_002518117.1| conserved hypothetical protein [Ricinus communis]
 gi|223542713|gb|EEF44250.1| conserved hypothetical protein [Ricinus communis]
          Length = 386

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 9/155 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G+    V+ ++E L+  G     + +   +F +  E AVK +Q   G    G++ +
Sbjct: 169 TLRKGSEGDEVREMQEALLNLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTA 228

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             L         R+   Q N +    +   +      +    +A+  AV +      +  
Sbjct: 229 ELL--------ERLYVGQQNKVTGSTISIDQKESSLTVSQKESANGAAVASITEISETQQ 280

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
            + +          +   ++    W  P  ++ KD
Sbjct: 281 KIVKDGVTEVKGSQQRVFLLGENRWEEPSRLVSKD 315


>gi|302518748|ref|ZP_07271090.1| predicted protein [Streptomyces sp. SPB78]
 gi|302427643|gb|EFK99458.1| predicted protein [Streptomyces sp. SPB78]
          Length = 317

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 242 VTQAVLRRGDSGPEVAKLEERLRAVGIYP--GRDDGRFDRGLEYALMTYQVTRGASDEHG 299

Query: 156 MVDSSTLEAMN 166
           +  + T   + 
Sbjct: 300 VYGADTRTKLE 310


>gi|167947216|ref|ZP_02534290.1| ErfK/YbiS/YcfS/YnhG family protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 75

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
               +H T +P  +   +R  + GC+R+    D++ + L D+  ++    +  ++     
Sbjct: 8   RGYLLHGTNKP--YGVGMR-VSHGCIRLY-PEDIEEFFLADSSEYAGADHQSSLQGGLAG 63

Query: 379 PVKLATEVP 387
              L    P
Sbjct: 64  WATLRRGAP 72


>gi|75910951|ref|YP_325247.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704676|gb|ABA24352.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 269

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 14/81 (17%)

Query: 91  RGGWPELPIR------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            GG P  P         L LG+   +V  ++  + +          +  + A     V+ 
Sbjct: 123 SGGRPTQPGPGVGGTVTLRLGSRGQAVSAVQRAIGVE--------PTGYYGAVTARRVRE 174

Query: 145 FQMRHGLDPSGMVDSSTLEAM 165
           FQ  +GL   G+V   T  A+
Sbjct: 175 FQANNGLRADGIVGPETRNAL 195



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 8/68 (11%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+   +V  ++  L +          +  +       V+ FQ  +GL   G+V   
Sbjct: 210 TLSFGSRGSAVSEVQRALGVE--------PTGYYGTVTVRRVREFQANNGLRVDGVVGPE 261

Query: 161 TLEAMNVP 168
           T  A+   
Sbjct: 262 TRSALLRS 269


>gi|312116025|ref|YP_004013621.1| hypothetical protein Rvan_3337 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311221154|gb|ADP72522.1| protein of unknown function DUF847 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 345

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              LH G     V  L+ RL   G   P+  +   F      AV LFQ  + L   G   
Sbjct: 159 DETLHAGMRGREVSSLQARLRALGY--PAGAVDGIFGEQTHRAVMLFQHDNAL--DGEAG 214


>gi|304310927|ref|YP_003810525.1| hypothetical protein HDN1F_12890 [gamma proteobacterium HdN1]
 gi|301796660|emb|CBL44872.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 162

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 25/164 (15%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI----NRIMFNPYWVIPR 248
            R + ++I   SL   E G +     +   R          +     +RI        P 
Sbjct: 3   RRQIEISIADQSLALCEAGSIIKIYRISTARNGAGNQNGSGKTPLGRHRIRAAIGAQQPM 62

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + +            + L   +        ++  +  + W       +         N +
Sbjct: 63  NAVFVGRRPTGEVYSEALARQHPQ------RDWILTRILWLCGCEIGY---------NRL 107

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +       R   Y+H TP+           + GC+R+RN   L
Sbjct: 108 GNVD---SQRRYIYIHGTPDSEPMGVP---LSHGCIRMRNADIL 145


>gi|206973101|ref|ZP_03234023.1| peptidoglycan-binding domain 1 protein [Bacillus cereus AH1134]
 gi|206731985|gb|EDZ49185.1| peptidoglycan-binding domain 1 protein [Bacillus cereus AH1134]
          Length = 595

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGL 151
              P   L  G+   +V  +++ L  I    LD P   +S  FDA   +AVK FQ  + +
Sbjct: 368 KSFPGYNLKEGDQKGAVLTVQKYLFHIRKKYLDIPEVIISGKFDANTVNAVKKFQKIYEI 427

Query: 152 DPSGMVDSSTLEAMN 166
             SG+VD  T   +N
Sbjct: 428 PESGIVDELTWNKLN 442



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 8/84 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ L+  L   G  D    +   +    E +VK FQ   G   +G+V    
Sbjct: 458 LQNGSQGESVKTLQTLLKKFGYYD--GQIDGFYGLGTEKSVKEFQKIKGFTVTGIVRKEL 515

Query: 162 LEAMNV------PVDLRIRQLQVN 179
              ++            +  L  N
Sbjct: 516 WRVLDELQHTYGSPRTTLNSLANN 539


>gi|114797087|ref|YP_759395.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
            15444]
 gi|114737261|gb|ABI75386.1| putative localization factor protein PodJ [Hyphomonas neptunium ATCC
            15444]
          Length = 1238

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 20/119 (16%)

Query: 63   IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVS---------VQR 113
            + S    +  ET+ +  +             W E P   L  G              VQ 
Sbjct: 1129 VRSLSSRLPPETVREVMET---------ADLWSETPSIALANGRFGAQRWNTGNPLQVQA 1179

Query: 114  LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            ++  L   G L           A   +A++ +Q   GL  SG V    ++ +N     R
Sbjct: 1180 VQTALSRLGYLSGEA--DGVLGAQTANAIRDYQRNEGLSVSGTVTPELIDRLNTGASNR 1236


>gi|168213487|ref|ZP_02639112.1| spore cortex-lytic enzyme SleC [Clostridium perfringens CPE str.
           F4969]
 gi|940393|dbj|BAA08081.1| spore cortex-lytic enzyme pre-pro-form [Clostridium perfringens]
 gi|14349151|dbj|BAB60714.1| sleC [Clostridium perfringens]
 gi|170715068|gb|EDT27250.1| spore cortex-lytic enzyme SleC [Clostridium perfringens CPE str.
           F4969]
          Length = 438

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKTGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFNLPQT 388

Query: 155 GMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G VD +T   ++       +I +L+ ++ +        M  R  +  I
Sbjct: 389 GEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRRENVPKI 436


>gi|18311542|ref|NP_563476.1| spore cortex-lytic enzyme SleC [Clostridium perfringens str. 13]
 gi|18146226|dbj|BAB82266.1| spore cortex-lytic enzyme [Clostridium perfringens str. 13]
          Length = 438

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKTGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFNLPQT 388

Query: 155 GMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G VD +T   ++       +I +L+ ++ +        M  R  +  I
Sbjct: 389 GEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRRENVPKI 436


>gi|323464476|gb|ADX76629.1| carboxy-terminal processing proteinase ctpA, putative
           [Staphylococcus pseudintermedius ED99]
          Length = 509

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y++I        +P +   H G     V+ ++  L   G       +   ++A + +A
Sbjct: 410 ADYENI------SVIPTKTTYHQGQEDKHVKSIKIGLKALGY--DVGTIDEHYNAQLTTA 461

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           VK FQ ++ L  +GM +  T
Sbjct: 462 VKQFQQKNDLTANGMFNKET 481


>gi|294851935|ref|ZP_06792608.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NVSL 07-0026]
 gi|294820524|gb|EFG37523.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NVSL 07-0026]
          Length = 238

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 74  PAIPIQKMDTRYLRQVVPDPTGEMPGAIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 217 FLNQDIIDLYDRVPAKTP 234


>gi|289976573|gb|ADD21635.1| matrix metalloprotease 1 [Nicotiana benthamiana]
          Length = 364

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 32/64 (50%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     + ++++     G +      +  FD  +ESA+K +Q    L+ +G++D+ T+E 
Sbjct: 52  GQKVDGLAKIKKYFYNFGYISSLSNFTDDFDDALESALKTYQQNFNLNTTGVLDAPTIEH 111

Query: 165 MNVP 168
           +  P
Sbjct: 112 LIRP 115


>gi|154245584|ref|YP_001416542.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154159669|gb|ABS66885.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 210

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 45/183 (24%), Gaps = 46/183 (25%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
                 Q+     R             ++++     L  V+     +R  + VGR   Q 
Sbjct: 51  PQDDYAQMDPAFRRQPVYFRTTEKPGTIVIHTNERFLYLVQGDNRAMRYGIGVGRDGFQ- 109

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 + R    P W  P  +IQ+                                   
Sbjct: 110 WSGLKSVERKAEWPDWTPPAEMIQRQ---------------------------------- 135

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
                P        G  N M +  +        Y +H T +P          +SGC R+ 
Sbjct: 136 -----PYLPRFMAGGPGNPMGARALYISG--TVYRIHGTNQPQTIGY---AVSSGCFRLV 185

Query: 348 NII 350
           N  
Sbjct: 186 NSD 188


>gi|163852744|ref|YP_001640787.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163664349|gb|ABY31716.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 199

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K     ++++     L  V  G   +R  V VGR    +      +      
Sbjct: 57  RDTVAYAGKEKPGTIVISTSQRRLYYVLGGGEAIRYGVGVGRQG-FSWSGTKTVTGKKEW 115

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 116 PAWRPPAQMLARR---------------------------------------PDLPRYMA 136

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G+ N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 137 GGQDNPLGARAMYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTN 179


>gi|254511433|ref|ZP_05123500.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535144|gb|EEE38132.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 194

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 63/209 (30%), Gaps = 52/209 (24%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQV-----NLMRIKKLLEQK-MGLRYVLVNIPAASLEAVEN 210
           V + +++A     D    QL V     +  +         +G+  +L +I + ++     
Sbjct: 20  VRAQSVDAFPQSEDAISTQLPVRRNVSSFSQQNWQDHFDELGVGCLLADITSRAVHYWGP 79

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
                     V   +  T   ++++ R   NP W    S+ ++D                
Sbjct: 80  DGTYKLYPSSVPMSEELTKRGYTKVVRKRENPSWTPTASMRERD---------------- 123

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEP 329
                                  P+   R + G   N + +  +         +H T + 
Sbjct: 124 -----------------------PSLPIRMEGGDPGNPLGTRAMYLDWP-AYLVHGTHDT 159

Query: 330 ILFNNVVRFETSGCVRVRN--IIDLDVWL 356
                  R  +SGC+ + N  + +L   +
Sbjct: 160 RKIG---RQSSSGCIGLYNQHVEELYPLV 185


>gi|254472009|ref|ZP_05085410.1| Putative peptidoglycan binding domain protein [Pseudovibrio sp.
           JE062]
 gi|211959211|gb|EEA94410.1| Putative peptidoglycan binding domain protein [Pseudovibrio sp.
           JE062]
          Length = 292

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 39/143 (27%), Gaps = 20/143 (13%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
             + E +        +    +  A      +  IP  S E I    +  +    +     
Sbjct: 167 GQVTEALLARLTMDFDAFTPSPNASAAESAEIPIPRASPEQIQALTQGGSNLTQVS---- 222

Query: 94  WPELPIRPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
                      G +      +++L++ L   G       +         SA+  FQ  + 
Sbjct: 223 -----------GQTDVMTERIKKLQQTLADLGY--GPLTIDGIPGGQTSSAIAAFQRDNA 269

Query: 151 LDPSGMVDSSTLEAMNVPVDLRI 173
           L   G +  +    +      RI
Sbjct: 270 LKVDGQMSEALFSKLAAVSGTRI 292



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  +++ L   G    S  L   F    E AV+ +Q +  +  +G V  + L  + +  D
Sbjct: 125 VAEVQKELRRLGVYPGS--LDGQFGPATERAVRAYQRQRAMSETGQVTEALLARLTMDFD 182

Query: 171 L 171
            
Sbjct: 183 A 183


>gi|190895029|ref|YP_001985322.1| hypothetical protein RHECIAT_PC0000695 [Rhizobium etli CIAT 652]
 gi|190700690|gb|ACE94772.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 216

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 47/187 (25%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 73  LYVIMENKTAIRYGVGVGREGFK-WFGRATIDAKSLWPRWTPPPEMRKRH---------- 121

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 122 ----------------------------PELPEFVDGGSPKNPLGPRAMYLHRDGVDTGY 153

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
             H T EP          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +
Sbjct: 154 RFHGTLEPWSIGKD---ASSGCIRIFNEDAID--LYQRCPIGTAVQVLPHIADQAESTTQ 208

Query: 382 LATEVPV 388
           ++   PV
Sbjct: 209 VSQTTPV 215


>gi|167745359|ref|ZP_02417486.1| hypothetical protein ANACAC_00050 [Anaerostipes caccae DSM 14662]
 gi|317473097|ref|ZP_07932396.1| peptidoglycan binding domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
 gi|167655080|gb|EDR99209.1| hypothetical protein ANACAC_00050 [Anaerostipes caccae DSM 14662]
 gi|316899435|gb|EFV21450.1| peptidoglycan binding domain-containing protein [Anaerostipes sp.
           3_2_56FAA]
          Length = 411

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V++++E+L  I+ D    P+  +   +      AV++FQ   GL  +
Sbjct: 326 PGYDLTIGSTGDKVRQMQEQLNRIAKDYPSIPTIPVDGTYGQQTADAVRVFQNVFGLGQT 385

Query: 155 GMVDSSTL 162
           G+VD  T 
Sbjct: 386 GVVDYPTW 393


>gi|218531585|ref|YP_002422401.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523888|gb|ACK84473.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 199

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R       K     ++++     L  V  G   +R  V VGR    +      +      
Sbjct: 57  RDTVAYAGKEKPGTIVISTSQRRLYYVLGGGEAIRYGVGVGRQG-FSWSGTKTVTGKKEW 115

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 116 PAWRPPAQMLARR---------------------------------------PDLPRYMA 136

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G+ N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 137 GGQDNPLGARAMYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTN 179


>gi|229153222|ref|ZP_04281401.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus m1550]
 gi|228630321|gb|EEK86971.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus m1550]
          Length = 153

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 35/160 (21%), Gaps = 59/160 (36%)

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
            ++  ++GK     TV  G+    TP    +I   + N  +     I   D         
Sbjct: 39  KMDYYQDGKFIKSFTVATGKATTPTPKGTFQIVNKIKNRPYYT-GKIKGGD--------- 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY- 322
                                                     N +    +          
Sbjct: 89  ----------------------------------------PRNPLGDRWLGLNMAGTYGT 108

Query: 323 ---MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
              +H T             T GC+R+ N      WL + 
Sbjct: 109 TYAIHGTNNNQAIGKWT---TLGCIRMYNND--IHWLFER 143


>gi|268610247|ref|ZP_06143974.1| hypothetical protein RflaF_12199 [Ruminococcus flavefaciens FD-1]
          Length = 367

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL  G+    V  L+E L  +        +   F A  E AV  FQ +HGL  +G  D+ 
Sbjct: 46  PLARGSKGEDVCWLQESLNQA--CGADLVVDDTFGAKTEEAVLNFQKQHGLPETGQADTH 103

Query: 161 TLE 163
           T+E
Sbjct: 104 TIE 106


>gi|83950745|ref|ZP_00959478.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           nubinhibens ISM]
 gi|83838644|gb|EAP77940.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           nubinhibens ISM]
          Length = 184

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 46/187 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            M   +  ++R+       +        +    VLV+I + +L               V 
Sbjct: 23  EMEQDISSKVRRNVSAFRSLDWQPYFSNLNNGAVLVDIDSRALHFWTESGEYFLFPSSVP 82

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             +  T    + + R +  P W    S+        L ++P                   
Sbjct: 83  MSEELTRRGRTSVVRKVEGPEWRPTPSM--------LERNP------------------- 115

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
               DW S           PG  N + +  +        Y +H T +        R  ++
Sbjct: 116 ----DWPSYVG--------PGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RRSSN 158

Query: 342 GCVRVRN 348
           GC+ + N
Sbjct: 159 GCIGLYN 165


>gi|266621402|ref|ZP_06114337.1| spore cortex-lytic enzyme SleC [Clostridium hathewayi DSM 13479]
 gi|288866936|gb|EFC99234.1| spore cortex-lytic enzyme SleC [Clostridium hathewayi DSM 13479]
          Length = 424

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L  I +     P       +     +AV+ FQ   GL  +
Sbjct: 339 PGYDLTIGSSGQKVQQVQEQLDAIATVYSAIPHITPDGIYGPATAAAVREFQSIFGLPVT 398

Query: 155 GMVDSSTLEAMN 166
           G++D  T   ++
Sbjct: 399 GVIDFRTWYKIS 410


>gi|299134352|ref|ZP_07027545.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
 gi|298591099|gb|EFI51301.1| ErfK/YbiS/YcfS/YnhG family protein [Afipia sp. 1NLS2]
          Length = 190

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 45/138 (32%), Gaps = 22/138 (15%)

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQ--KDMMALLRQDPQYLKDNNIHM----IDEKG 278
              +PI   R++          P SI+   ++    L   P       I +        G
Sbjct: 41  GHSSPIPRQRVSY----QSNYAPGSIVVDTRERRLYLITAPGEAMRYGIGVGRDGFRWGG 96

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDP--------GKINAMASTKIEFYSRNNTYMHDTPEPI 330
                 + +W S  PP+ + R+ P        G  N + +  +         +H + EP 
Sbjct: 97  VHRITAKKEWPSWTPPSQMLRRRPDLPRHMKGGPENPLGARAMYLG-STLYRIHGSNEPE 155

Query: 331 LFNNVVRFETSGCVRVRN 348
                    +SGC R+ N
Sbjct: 156 TIGQ---AVSSGCFRMVN 170


>gi|229020273|ref|ZP_04177042.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1273]
 gi|229026497|ref|ZP_04182852.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1272]
 gi|228734805|gb|EEL85445.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1272]
 gi|228741026|gb|EEL91255.1| ErfK/YbiS/YcfS/YnhG [Bacillus cereus AH1273]
          Length = 145

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 39/167 (23%), Gaps = 59/167 (35%)

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM 256
           +V+     ++  +NGK     +V  G+V   TP    ++   + N  +            
Sbjct: 24  IVDTKLNKMDFYQNGKFIKSFSVATGKVATPTPKGTFQVVNKIKNRPYY----------- 72

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                        +I                                  N +    +   
Sbjct: 73  -----------KGHIK----------------------------GGDPRNPLGDRWLGLN 93

Query: 317 SRNNTY----MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
                     +H T             T GC+R+ N      WL + 
Sbjct: 94  MAGTYGTTYAIHGTNNNQAIGK---ATTLGCIRMYNND--IHWLFER 135


>gi|254520431|ref|ZP_05132487.1| spore cortex-lytic enzyme SleC [Clostridium sp. 7_2_43FAA]
 gi|226914180|gb|EEH99381.1| spore cortex-lytic enzyme SleC [Clostridium sp. 7_2_43FAA]
          Length = 479

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 8/119 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V+ ++E L  I     L P       + A    AV++FQ    L  +
Sbjct: 361 PGYDLVIGSSGQEVRIIQEFLNRISQNYPLIPKVAQDGIYGANTAEAVRVFQGVFNLPKT 420

Query: 155 GMVDSSTLEAMN---VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           G+VD +T   ++   V V              +  +  +    Y    IP    + +++
Sbjct: 421 GVVDYATWYKISDVYVGVTRIAELRGSARSVQRIFVPPRSFDNYYDPTIPKF--DYMDD 477


>gi|162449468|ref|YP_001611835.1| hypothetical protein sce1198 [Sorangium cellulosum 'So ce 56']
 gi|161160050|emb|CAN91355.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 241

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 17/96 (17%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSV---------------SVQRLRERLIISGDLDPSKGL 130
           Q ++     P++P   L +G                    V  ++ RL   G        
Sbjct: 141 QGLVEAFVPPDMPRARLTVGEGDDVHVYNIAPRTLNPSRDVDGIQARLANLGYYS--GPR 198

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               DA   +A+K FQ  H L+ +G  D +T  A++
Sbjct: 199 HGELDAATIAALKRFQSDHDLEATGKPDEATASALS 234


>gi|78224668|ref|YP_386415.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
 gi|78195923|gb|ABB33690.1| ErfK/YbiS/YcfS/YnhG [Geobacter metallireducens GS-15]
          Length = 482

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 54/185 (29%), Gaps = 44/185 (23%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGL---RSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
               R ++VN+    L   +     L      V VG  +R TP   +R+ R    P W +
Sbjct: 164 DTPRRGIVVNVATMRLFQYKGDGASLAVSTYPVGVGTKERPTPTGPTRVYRKAARPTWHV 223

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P SI +                                    +  +         PG  N
Sbjct: 224 PASIAED-----------------------------------HRKKGDPLPPEVPPGPEN 248

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            +    +         +H T +P          T+GC+R+    ++   L  DTP  +  
Sbjct: 249 PLGEYALYLSKP-GYLIHGTNKPASIG---LKATNGCMRLY-PENI-EVLYNDTPVNTPV 302

Query: 367 HIEEV 371
            I   
Sbjct: 303 AIVNQ 307


>gi|295101499|emb|CBK99044.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii L2-6]
          Length = 230

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 3/84 (3%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            Y     RG     P   L  G+    V  L++ L   G       +   F +  E A+K
Sbjct: 137 RYGTPACRGTTAGYP--TLRRGSRGCYVMILQDALSTLGY-QTGNRIDGIFGSRTEEALK 193

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ R  L   G+   ++ + ++ 
Sbjct: 194 GFQRRTSLRADGVCGCNSWKKIST 217


>gi|262275011|ref|ZP_06052822.1| general secretion pathway protein A/general secretion pathway
           protein B [Grimontia hollisae CIP 101886]
 gi|262221574|gb|EEY72888.1| general secretion pathway protein A/general secretion pathway
           protein B [Grimontia hollisae CIP 101886]
          Length = 755

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 102 LHLGNSSVSVQRLRERLI-ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  G     V+ L +RL  + GD   +  +S  F       V+ FQ   GLD  G+  + 
Sbjct: 483 IKFGQRGERVRWLDQRLNLVLGD---TTPVSDIFGQAQRVKVREFQRSKGLDADGIPGAM 539

Query: 161 TL 162
           T 
Sbjct: 540 TF 541


>gi|148559501|ref|YP_001259057.1| hypothetical protein BOV_1095 [Brucella ovis ATCC 25840]
 gi|260546601|ref|ZP_05822340.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260566329|ref|ZP_05836799.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260754878|ref|ZP_05867226.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260758095|ref|ZP_05870443.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260761919|ref|ZP_05874262.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883890|ref|ZP_05895504.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261214130|ref|ZP_05928411.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261219484|ref|ZP_05933765.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261222302|ref|ZP_05936583.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261314141|ref|ZP_05953338.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317770|ref|ZP_05956967.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261321979|ref|ZP_05961176.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261325226|ref|ZP_05964423.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261752441|ref|ZP_05996150.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261755101|ref|ZP_05998810.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261758326|ref|ZP_06002035.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|265984195|ref|ZP_06096930.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|265988801|ref|ZP_06101358.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265995052|ref|ZP_06107609.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998266|ref|ZP_06110823.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|265999446|ref|ZP_05466404.2| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|148370758|gb|ABQ60737.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
 gi|260095651|gb|EEW79528.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260155847|gb|EEW90927.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260668413|gb|EEX55353.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260672351|gb|EEX59172.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674986|gb|EEX61807.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260873418|gb|EEX80487.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260915737|gb|EEX82598.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260920886|gb|EEX87539.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|260924573|gb|EEX91141.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261294669|gb|EEX98165.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|261296993|gb|EEY00490.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261301206|gb|EEY04703.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261303167|gb|EEY06664.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261738310|gb|EEY26306.1| ErfK/YbiS/YcfS/YnhG [Brucella sp. F5/99]
 gi|261742194|gb|EEY30120.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261744854|gb|EEY32780.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|262552734|gb|EEZ08724.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|262766165|gb|EEZ11954.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263094003|gb|EEZ17937.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis bv. 2 str. 63/9]
 gi|264660998|gb|EEZ31259.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|264662787|gb|EEZ33048.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|326538864|gb|ADZ87079.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 255

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 9/119 (7%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           +  ++  +A+ +Q  ++     I    E  + +   E ++ +      F    D G  N 
Sbjct: 136 TTARRYGIAVGKQGLEFQGKATISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 195

Query: 308 MASTKIEF--YSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           + S  +     +++    +H T +P    +     ++GC R+   +++DL   +   T 
Sbjct: 196 LGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYDRVTLGTE 251


>gi|326391572|ref|ZP_08213103.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992402|gb|EGD50863.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 229

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +V V   ++ L  +G L  +  +   F    ++AV  FQ  H L P G+V S T  A
Sbjct: 166 GSQNVYVATCQDALYYNGYLTLT-DIDGIFGDITKNAVIKFQKDHNLTPDGIVGSQTWSA 224

Query: 165 M 165
           +
Sbjct: 225 L 225


>gi|228899435|ref|ZP_04063692.1| hypothetical protein bthur0014_6570 [Bacillus thuringiensis IBL
           4222]
 gi|228860192|gb|EEN04595.1| hypothetical protein bthur0014_6570 [Bacillus thuringiensis IBL
           4222]
          Length = 219

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|254502110|ref|ZP_05114261.1| phage lysozyme, putative [Labrenzia alexandrii DFL-11]
 gi|222438181|gb|EEE44860.1| phage lysozyme, putative [Labrenzia alexandrii DFL-11]
          Length = 296

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMN 166
              +  L+  L + G       +   F A  ++AVK FQ  +  L   G+   +T  A+ 
Sbjct: 171 GSDIMELQRSLKMLGF--DPGPIDGFFGAQTKAAVKDFQKAYPPLAVDGIPGPATRSALA 228

Query: 167 VPVDLR 172
             + LR
Sbjct: 229 RSISLR 234


>gi|226844843|gb|ACO87302.1| SleC [Clostridium perfringens]
          Length = 438

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 5/108 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKFGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFDLPQT 388

Query: 155 GMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G VD +T   ++       +I +L+ ++ +           R  +  I
Sbjct: 389 GEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTMTDRRENVPKI 436


>gi|89070993|ref|ZP_01158216.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           granulosus HTCC2516]
 gi|89043456|gb|EAR49671.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           granulosus HTCC2516]
          Length = 187

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRF 338
            + ++ +      +      G  N + +  +  +          +H TP+        R 
Sbjct: 102 PDMIERDPESYKQYEDGMPGGPNNPLGARALYLFEPGRGDTFLRIHGTPDAQTIG---RR 158

Query: 339 ETSGCVRVRN 348
            ++GCVR+ N
Sbjct: 159 VSNGCVRLVN 168


>gi|119718549|ref|YP_925514.1| peptidoglycan binding domain-containing protein [Nocardioides sp.
           JS614]
 gi|119539210|gb|ABL83827.1| Peptidoglycan-binding domain 1 protein [Nocardioides sp. JS614]
          Length = 485

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG++ ++V+RL+  L  +G +  S  ++  F A    AV+ +Q + G + SG+  
Sbjct: 415 TPVLKLGSTGLAVRRLQRTLNAAG-VSDSVRMNGMFKAETADAVRAYQQQVGTEVSGVAG 473

Query: 159 SSTLEAMNV 167
             T  A++ 
Sbjct: 474 YRTWRALSA 482


>gi|302879426|ref|YP_003847990.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
           ES-2]
 gi|302582215|gb|ADL56226.1| ErfK/YbiS/YcfS/YnhG family protein [Gallionella capsiferriformans
           ES-2]
          Length = 159

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRY 366
            Y+H TP+           + GC+R+RN    +L   +   TP     
Sbjct: 115 IYIHGTPDTEPMGE---ARSHGCIRMRNADLVELYDLVPAGTPVEIVE 159


>gi|291483804|dbj|BAI84879.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 297

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              S   V +++  L            + G+   +      AV  FQ  +GL   G+   
Sbjct: 227 PYTSGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGP 286

Query: 160 STLEAMNV 167
           +T   +  
Sbjct: 287 ATKAKIAA 294


>gi|291299239|ref|YP_003510517.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568459|gb|ADD41424.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 198

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           +    +  L +  L   G L  S  +   F      A K +Q  H LD  G V S T  A
Sbjct: 68  SRGTDLVLLWQSILAADGYLPGS-EIDGYFGDRTAEATKEWQSDHDLDSDGRVGSKTWAA 126

Query: 165 MN 166
            +
Sbjct: 127 AD 128


>gi|224146279|ref|XP_002325947.1| predicted protein [Populus trichocarpa]
 gi|222862822|gb|EEF00329.1| predicted protein [Populus trichocarpa]
          Length = 308

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           +  G +   +  L++ L   G         S  FD ++E A+K +Q    L+ +G +DSS
Sbjct: 46  IQKGQTVEGLIELKQYLKKFGYYPSDITLTSSDFDDHLELALKTYQEYFHLNVTGNLDSS 105

Query: 161 TLEAMNVP 168
           T++ M +P
Sbjct: 106 TIQQMMIP 113


>gi|114707693|ref|ZP_01440588.1| hypothetical protein FP2506_02455 [Fulvimarina pelagi HTCC2506]
 gi|114536937|gb|EAU40066.1| hypothetical protein FP2506_02455 [Fulvimarina pelagi HTCC2506]
          Length = 247

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 71/213 (33%), Gaps = 46/213 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQ--KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
             +   ++    +R +    +  +     V+V+ P   L  V+   + +R  + VGR   
Sbjct: 74  PAIPSEKIDPQYLRQEVSYPEGSQYEPGTVVVDTPNRFLYLVQPNGMAMRYGIGVGRAG- 132

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            +    + +N     P W  P  +I  D    L +     ++  +               
Sbjct: 133 FSWSGDAYVNSKQHWPKWHPPGEMI--DRKPELEE----YRNGGME-------------- 172

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGC 343
                          PG  N + +  +      ++  + +H TPE           +SGC
Sbjct: 173 ---------------PGLTNPLGARALYLFQGGKDTLFRIHGTPEWWTVGT---AASSGC 214

Query: 344 VRV--RNIIDLDVWLLKDTPTWSRYHIEEVVKT 374
           +R+  +++IDL   + ++     +   E +   
Sbjct: 215 IRMMNQDVIDLYERVPRNAKVVVKQGQERMAAR 247


>gi|119945970|ref|YP_943650.1| peptidoglycan binding domain-containing protein [Psychromonas
           ingrahamii 37]
 gi|119864574|gb|ABM04051.1| Peptidoglycan-binding domain 1 protein [Psychromonas ingrahamii 37]
          Length = 221

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+R++E L + G       +  A+      +V  FQ   GL  +G VD +T  A
Sbjct: 28  GMRGKEVKRVQEWLNLQG---VGVVIDSAYGPATTRSVVRFQDESGLSETGEVDDATFNA 84

Query: 165 MNVPVDLRIRQ 175
           +  P+   ++Q
Sbjct: 85  LVKPMRDVLKQ 95


>gi|298291234|ref|YP_003693173.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296927745|gb|ADH88554.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 225

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 67/226 (29%), Gaps = 53/226 (23%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           AV  F  R+     G      +    +    R   +     ++   L      R+     
Sbjct: 41  AVSPFASRYAALEDGGFRVPGVPVGEMKERNRRALVDDPTGQLPGTLVVDPKNRF----- 95

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
               L  V+     LR  V VGR   +     + +      P W    ++I ++      
Sbjct: 96  ----LYLVQENGKALRYGVGVGREGLE-FSGTAEVAHKRAWPRWTPTPNMIARE------ 144

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSR 318
             P+  +                    W              G+ N + +  +      +
Sbjct: 145 --PEKYEK-------------------WAGGMAG--------GESNPLGARALYLFKDGK 175

Query: 319 NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +  Y +H T EP          +SGC+R+  +++IDL   +   T 
Sbjct: 176 DTLYRIHGTNEPWSIGE---AVSSGCIRMMNQDVIDLYQRIPDGTK 218


>gi|17987131|ref|NP_539765.1| carnitine operon oxidoreductase CaiA [Brucella melitensis bv. 1
           str. 16M]
 gi|17982795|gb|AAL52029.1| probable carnitine operon oxidoreductase caia [Brucella melitensis
           bv. 1 str. 16M]
          Length = 215

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 18/211 (8%)

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
             A  V  + ++ +   N+ ++      K           A +     N     + ++  
Sbjct: 8   FVASPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDP 63

Query: 222 -GRVDRQTPILHSRINRIMFNPYW----VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             R    T   +     ++         V   +  ++  +A+ +Q  ++     I    E
Sbjct: 64  KFRPQDVTFTGYKPGTIVIDPKKRFLYLVETSTTARRYGIAVGKQGLEFQGKATISAKRE 123

Query: 277 KGKEVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILF 332
             + +   E ++ +      F    D G  N + S  +  +  N      +H T +P   
Sbjct: 124 WPRWIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTI 183

Query: 333 NNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
            +     ++GC R+   +++DL   +   T 
Sbjct: 184 GSS---ASNGCFRMINEDVMDLYDRVTLGTE 211


>gi|84501438|ref|ZP_00999643.1| hypothetical protein OB2597_13773 [Oceanicola batsensis HTCC2597]
 gi|84390729|gb|EAQ03217.1| hypothetical protein OB2597_13773 [Oceanicola batsensis HTCC2597]
          Length = 548

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  RL   G           FDA    A++ FQ   GL+ +G V  +T+  +   
Sbjct: 494 VLVERRLQQLGF--EPGAPDGRFDAETRRAIRRFQRSRGLEVTGFVTQATMVRLLSS 548


>gi|99080946|ref|YP_613100.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
 gi|99037226|gb|ABF63838.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. TM1040]
          Length = 205

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 51/206 (24%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQV-----NLMRIKKLLE-QKMGLRYVLVNIPAAS 204
           L   G++ + + +A          Q+ V     +  + +     + +G+  +L +I + +
Sbjct: 24  LATPGLLRAQSTDAFPASEPAIREQIPVQRNVSSFQQQRWQDHFETLGVGCLLADIESRA 83

Query: 205 LEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
           L     +G+  L     V   +  T   +S+I R   NP W    ++ ++D         
Sbjct: 84  LHYWGGDGETYLLFPSSVPMSEELTRRGYSKIVRKRENPSWTPTANMRERD--------- 134

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTY 322
                                         P+   R + G   N + +  +         
Sbjct: 135 ------------------------------PSLPQRIEGGEPNNPLGTRALYLDWP-AYL 163

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRN 348
           +H T +        R  +SGC+ + N
Sbjct: 164 VHGTHDTRKIG---RQSSSGCIGLYN 186


>gi|85714219|ref|ZP_01045207.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
 gi|85698666|gb|EAQ36535.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter sp. Nb-311A]
          Length = 116

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           P+     + G  N + +  +   S     +H + EP          +SGC+R+RN
Sbjct: 47  PDLPRHMEGGPQNPLGARAMYLGSS-LYRIHGSNEPWTIGTN---VSSGCIRMRN 97


>gi|90423688|ref|YP_532058.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris
           BisB18]
 gi|90105702|gb|ABD87739.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris
           BisB18]
          Length = 289

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 90  SRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + G W    P +    L LG     V  L+  L   G        +  +D      V  F
Sbjct: 193 AVGHWVPPAPIVRSEVLKLGADGDEVMALQRALADYGY---GLTPNGCYDPATADVVTAF 249

Query: 146 QMRHG-LDPSGMVDSSTLEAMNVPVDLR 172
           Q         G+ D+STL  +++ ++ R
Sbjct: 250 QRHFRPQRVDGIADASTLTTLHMLLESR 277


>gi|306841861|ref|ZP_07474542.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
 gi|306288054|gb|EFM59454.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO2]
          Length = 255

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 70/208 (33%), Gaps = 18/208 (8%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV-GR 223
             V  + ++ +   N+ ++      K           A +     N     + ++    R
Sbjct: 51  SPVNAEAQLDEAAANVQKVALASNAKANPDKPKKKTAART----NNTAKANKYSIDPKFR 106

Query: 224 VDRQTPILHSRINRIMFNPY---WVIPRSIIQKDM-MALLRQDPQYLKDNNIHMIDEKGK 279
               T   +     ++       +++  S   +   +A+ +Q  ++     I    E  +
Sbjct: 107 PQDVTFTGYKPGTIVIDPRKRFLYLVETSTTARRYGIAVGKQGLEFQGKATISAKREWPR 166

Query: 280 EVF-VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNN-TYMHDTPEPILFNNV 335
            +   E ++ +      F    D G  N + S  +     +++    +H T +P    + 
Sbjct: 167 WIPTKEMIERDPAHYGRFKNGMDGGPGNPLGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS 226

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDTP 361
               ++GC R+   +++DL   +   T 
Sbjct: 227 ---ASNGCFRMINEDVMDLYDRVTLGTE 251


>gi|146295638|ref|YP_001179409.1| carboxyl-terminal protease [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145409214|gb|ABP66218.1| carboxyl-terminal protease [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 472

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+  + V   ++RL     L    G     D    +A+K FQ  + L  +G++
Sbjct: 380 ATKKYKKGDMDLEVLAAQQRLYYLRYLSSWTG---KMDDATVNAIKKFQKDNKLSLNGVL 436

Query: 158 DSSTLEAMN 166
           D +T + +N
Sbjct: 437 DITTQKKLN 445


>gi|126730071|ref|ZP_01745883.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Sagittula
           stellata E-37]
 gi|126709451|gb|EBA08505.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Sagittula
           stellata E-37]
          Length = 169

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 46/171 (26%), Gaps = 44/171 (25%)

Query: 179 NLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
           +   +        +    +LV+I + +L   E           V   +  T    + I  
Sbjct: 23  SFRTLNWQPYFSNLTKGAILVDISSRALHYWEENGQYHLYPCSVPLTEDLTRRGRTSIVL 82

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
              NP W    S+          ++P++                                
Sbjct: 83  KDPNPDWRPTPSMKV--------RNPEW-------------------------------P 103

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 104 DYVGPGPDNPLGTRAMHLGWQY-YRIHGTHDTRKIG---RRSSNGCIGLYN 150


>gi|321315030|ref|YP_004207317.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
 gi|320021304|gb|ADV96290.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
          Length = 297

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 4/68 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              S   V +++  L            + G+   +      AV  FQ  +GL   G+   
Sbjct: 227 PYTSGEHVFQVQRALAALYFYPDKGAVNNGIDGIYGPKTADAVARFQSVNGLTADGIYGP 286

Query: 160 STLEAMNV 167
           +T   +  
Sbjct: 287 ATKAKIAA 294


>gi|291614448|ref|YP_003524605.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291584560|gb|ADE12218.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 159

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 49/173 (28%), Gaps = 28/173 (16%)

Query: 198 VNIPAASLEAVEN-GKVGLRSTVIVGRVDRQTPILHS----RINRIMFNPYWVIPRSIIQ 252
           ++IP  +LE  ++ GK   R  V  G                 + I        P + + 
Sbjct: 5   IHIPEQTLELFDDDGKPLRRYRVSTGANGVGEENGSFCTPRGKHVIRARIGAGQPENTVF 64

Query: 253 KDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK 312
                        L           G++  +  + W S     +      G  + M    
Sbjct: 65  VKRRPTGEIYTPELGRQQ------PGRDWILTRILWLSGCESGYN---RSGSCDTMRRY- 114

Query: 313 IEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTW 363
                    Y+H TP+           + GC+R+RN    +L   +   T   
Sbjct: 115 --------IYIHGTPDGTALGKPG---SHGCIRMRNADMVELFELVKTGTEVE 156


>gi|153812437|ref|ZP_01965105.1| hypothetical protein RUMOBE_02836 [Ruminococcus obeum ATCC 29174]
 gi|149831599|gb|EDM86686.1| hypothetical protein RUMOBE_02836 [Ruminococcus obeum ATCC 29174]
          Length = 349

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L++G +   V++L+E+L +I+G     P  G    +      +V+ FQ   GL  +
Sbjct: 265 PGYDLNIGATGEKVRQLQEQLNVIAGAYPAIPKVGEDGIYGERTSESVRKFQNVFGLPET 324

Query: 155 GMVDSSTLEAMN 166
           G+ D  T   + 
Sbjct: 325 GITDYPTWYKIQ 336


>gi|34496770|ref|NP_900985.1| hypothetical protein CV_1315 [Chromobacterium violaceum ATCC 12472]
 gi|34102625|gb|AAQ58990.1| probable phage-related protein [Chromobacterium violaceum ATCC
           12472]
          Length = 264

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 6/92 (6%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L+ G+    V+ L+ RL   G       +   + +  E AV   Q R GL  SG+  S
Sbjct: 2   QALNKGSCGQEVRELQTRLNCQG---ARLLVDGWYGSATEQAVAKLQRRAGLVVSGVAGS 58

Query: 160 STLEAMNVPVDLR---IRQLQVNLMRIKKLLE 188
           +TL A+    D R      L      ++  L 
Sbjct: 59  ATLAALRGQRDPRRLGETDLIAAAESLRLPLP 90


>gi|328880762|emb|CCA54001.1| hypothetical protein SVEN_0714 [Streptomyces venezuelae ATCC 10712]
          Length = 130

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLR-ERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMR 148
             GW  +P R    G++ V V+ L+ +   I G D      +   F    +  +K FQ +
Sbjct: 49  ANGW-LIPARNFQYGSTGVCVRELQSDVASIMGIDPADWPFVDGVFGTKTDDYIKEFQRQ 107

Query: 149 HGLDPSGMVDSSTLEAM 165
           H L   G+V  +T EA+
Sbjct: 108 HHLIVDGVVGPNTWEAL 124


>gi|262376717|ref|ZP_06069945.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145]
 gi|262308427|gb|EEY89562.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter lwoffii SH145]
          Length = 177

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTWSRYH 367
            Y+H TPE           + GC+R+RN    +L   + +D   +    
Sbjct: 119 IYIHGTPETEKMGEP---LSHGCIRMRNPEVAELFDLISEDALVYISEQ 164


>gi|170742570|ref|YP_001771225.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168196844|gb|ACA18791.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 190

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 46/164 (28%), Gaps = 46/164 (28%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                K G   V+V+     L  +   +  ++  V VGR D  +      +      P W
Sbjct: 53  WNSPYKPGT--VVVSTSQRRLYYILPNQEAIQYGVGVGR-DGFSWSGTKTVTMKKEWPAW 109

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P  ++++                                        P+       G 
Sbjct: 110 RPPEQMLRRR---------------------------------------PDLPRYMAGGM 130

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 131 DNPLGARALYLGSS-LYRIHGSNEPETIGA---AVSSGCIRMTN 170


>gi|52082056|ref|YP_080847.1| peptidase S41A, C-terminal protease [Bacillus licheniformis ATCC
           14580]
 gi|52787445|ref|YP_093274.1| YvjB [Bacillus licheniformis ATCC 14580]
 gi|319647922|ref|ZP_08002140.1| YvjB protein [Bacillus sp. BT1B_CT2]
 gi|52005267|gb|AAU25209.1| Peptidase S41A, C-terminal protease [Bacillus licheniformis ATCC
           14580]
 gi|52349947|gb|AAU42581.1| YvjB [Bacillus licheniformis ATCC 14580]
 gi|317390263|gb|EFV71072.1| YvjB protein [Bacillus sp. BT1B_CT2]
          Length = 479

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 16/99 (16%)

Query: 88  ILSRGGWPELP--------------IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           I  +G  P +P                PL    ++  ++R +  L   G +         
Sbjct: 362 IHKQGIQPTVPVTQPAYFSAGPLQLKEPLKPDMNNNEIKRAQFLLKGLGFVP--GREDGY 419

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           ++   + AV  FQ  + L  +G++D  T   MN+ ++ +
Sbjct: 420 YNESTKKAVMAFQAANKLKQTGIIDQKTANTMNLRIEEK 458


>gi|225433438|ref|XP_002285669.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 372

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L +G+    V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 154 KTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKTWQASLGAPENGIMT 213

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRI 183
           +  LE + +   +    L+ N+   
Sbjct: 214 AELLERLFMEQHIEAAGLKRNIDPK 238


>gi|297741928|emb|CBI33363.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 1/85 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L +G+    V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 20  KTLRVGSEGEEVRAMQEALQNLGFYSGEEDVEFSSFSSGTERAVKTWQASLGAPENGIMT 79

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRI 183
           +  LE + +   +    L+ N+   
Sbjct: 80  AELLERLFMEQHIEAAGLKRNIDPK 104


>gi|307105888|gb|EFN54135.1| hypothetical protein CHLNCDRAFT_58231 [Chlorella variabilis]
          Length = 651

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI 99
           +     ++         AR      S + + S     Q +  +A  +   ++    E   
Sbjct: 3   LAVPQRALTVRPRGARTARSHG--RSAVLVRSMLGPYQYKTRVARLRLKGAQVH--EFGD 58

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G+    V +L+  L   G      GLS  F      A++ +Q   GL  +G+ D
Sbjct: 59  RVLQQGSFGDDVMQLQAYLAEQGYFSSDDGLSGYFGDVTGQALQAWQRDQGLRVTGVFD 117


>gi|115373620|ref|ZP_01460915.1| interstitial collagenase (Matrixmetalloproteinase-1) (MMP-1)
           (Fibroblast collagenase) [Stigmatella aurantiaca
           DW4/3-1]
 gi|310824941|ref|YP_003957299.1| peptidase [Stigmatella aurantiaca DW4/3-1]
 gi|115369323|gb|EAU68263.1| interstitial collagenase  (Matrixmetalloproteinase-1) (MMP-1)
           (Fibroblast collagenase) [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398013|gb|ADO75472.1| Peptidase [Stigmatella aurantiaca DW4/3-1]
          Length = 477

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 26/82 (31%), Gaps = 16/82 (19%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD----------------PSKGLSVAFDAYVESAVKLFQ 146
             G+    V+     L   G                           FD  +E+ ++ FQ
Sbjct: 38  RKGSRGPQVEEAFRHLQAHGYFPNAELAREYPGFRPAVAREPARPDVFDDALEAGLQRFQ 97

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
              GL  +G +D++T   M+  
Sbjct: 98  EAQGLPVTGELDAATRALMHRS 119


>gi|296332614|ref|ZP_06875075.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|296150532|gb|EFG91420.1| N-acetylmuramoyl-L-alanine amidase; skin element [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
          Length = 159

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 109 VSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            +V++++  L         K    G+   +      AV+ FQ+ +GL   G+    T   
Sbjct: 94  DAVEQIQTALAALHFYPDKKAKNFGIDSYYGPQTADAVRRFQLMYGLSADGIYGPKTKAK 153

Query: 165 MNV 167
           +  
Sbjct: 154 IEA 156


>gi|258653019|ref|YP_003202175.1| peptidoglycan-binding protein [Nakamurella multipartita DSM 44233]
 gi|258556244|gb|ACV79186.1| Peptidoglycan-binding domain 1 protein [Nakamurella multipartita
           DSM 44233]
          Length = 554

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 86  QDILSRGGWPELPIRP-------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + ++   G  ++P  P       L +G   V+V+ L+ERL  SG       +   F    
Sbjct: 140 ETVVDGPGATQVPSNPAAGTHAQLQVGAKGVAVKELQERLNNSGVAGAKLLVDGIFGPKT 199

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++ +K FQ    +  +G+ D +T   +  
Sbjct: 200 DAGLKTFQGTIPVAATGIADPATWTKLET 228


>gi|229154450|ref|ZP_04282567.1| hypothetical protein bcere0010_6470 [Bacillus cereus ATCC 4342]
 gi|228628848|gb|EEK85558.1| hypothetical protein bcere0010_6470 [Bacillus cereus ATCC 4342]
          Length = 219

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 8/62 (12%), Positives = 23/62 (37%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +N   +H T       +     ++GC+R+
Sbjct: 33  TKFKNKEYHRKKIAGGAPNNPLGTRWLGL-DKNEYAIHGTNREWTIGSRE---SNGCIRM 88

Query: 347 RN 348
            +
Sbjct: 89  HD 90


>gi|170747455|ref|YP_001753715.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653977|gb|ACB23032.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 169

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 44/173 (25%), Gaps = 45/173 (26%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           Q    R        +    V++++    L  V      +R  V VGR  +Q       I+
Sbjct: 21  QAAQAREIVPFANGVAPGSVVISVSQRKLYLVNGDGTAIRYPVAVGRPGKQ-WFGIKPID 79

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
                P W  P  + +                                       + P  
Sbjct: 80  GKYVAPAWSPPAEVKR---------------------------------------DNPRL 100

Query: 297 IFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                 G   N M +  +         +H T  P        + + GC+R+ N
Sbjct: 101 PNLIAGGSPHNPMGAAAMTLAGGE-YAIHGTNRPSSVGT---YASYGCIRMYN 149


>gi|169333708|ref|ZP_02860901.1| hypothetical protein ANASTE_00092 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259557|gb|EDS73523.1| hypothetical protein ANASTE_00092 [Anaerofustis stercorihominis DSM
           17244]
          Length = 242

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)

Query: 96  ELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
            +   PL   G+    V++ + +L   G       +   F +   SAVK FQ ++ L   
Sbjct: 172 PVSEYPLIRKGSKGSYVKKAQTQLNKKGGYK--LKVDGIFGSATLSAVKKFQKKNKLVVD 229

Query: 155 GMVDSSTLEAM 165
           G+V + T   +
Sbjct: 230 GIVGAKTWSKL 240


>gi|116624466|ref|YP_826622.1| peptidoglycan binding domain-containing protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116227628|gb|ABJ86337.1| Peptidoglycan-binding domain 1 protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 262

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 15/84 (17%)

Query: 89  LSRGGWPELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            +       P   +  G+    SV  +++RL ++ D          F A  + AV+LFQ 
Sbjct: 3   AASQPAIAFPGHVVKAGSDDKASVLAIQQRLNLTQD--------GVFSAETQEAVQLFQA 54

Query: 148 R------HGLDPSGMVDSSTLEAM 165
           R      H L   G V   T  A+
Sbjct: 55  RSLDFQDHPLTVDGQVGPMTWAAL 78


>gi|319650587|ref|ZP_08004727.1| carboxyl-terminal processing protease [Bacillus sp. 2_A_57_CT2]
 gi|317397768|gb|EFV78466.1| carboxyl-terminal processing protease [Bacillus sp. 2_A_57_CT2]
          Length = 474

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 2/82 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL +  ++  V+  +E L   G           F+    +AVK FQ +  L+ SG +D 
Sbjct: 385 KPLAIDMNNEMVKNAQEILAGLGYAP--GRTDGYFNDSTAAAVKAFQKQKELEASGRIDK 442

Query: 160 STLEAMNVPVDLRIRQLQVNLM 181
            T  A+       +R+ Q +L 
Sbjct: 443 KTAAALEQAAIEEMRKEQNDLQ 464


>gi|291004107|ref|ZP_06562080.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 245

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK-----GLSVAFDAYVESAVK 143
            +   W     R L  G+S   V+ L+ R  ++G    S       +   F    ++AV 
Sbjct: 32  AAAYDW----SRELREGHSGADVRELQIR--VAGWAADSAQKTHVAVDGQFGPGTKAAVV 85

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ  +GL  SG+VDS+T + +N 
Sbjct: 86  RFQKAYGLAGSGVVDSATQQKLNA 109


>gi|134102502|ref|YP_001108163.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
 gi|133915125|emb|CAM05238.1| putative muramoyl-pentapeptide carboxypeptidase [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 243

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK-----GLSVAFDAYVESAVK 143
            +   W     R L  G+S   V+ L+ R  ++G    S       +   F    ++AV 
Sbjct: 30  AAAYDW----SRELREGHSGADVRELQIR--VAGWAADSAQKTHVAVDGQFGPGTKAAVV 83

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ  +GL  SG+VDS+T + +N 
Sbjct: 84  RFQKAYGLAGSGVVDSATQQKLNA 107


>gi|111221344|ref|YP_712138.1| hypothetical protein FRAAL1904 [Frankia alni ACN14a]
 gi|111148876|emb|CAJ60554.1| hypothetical protein; putative Peptidoglycan-binding domain
           ErfK/YbiS/YcfS/YnhG [Frankia alni ACN14a]
          Length = 329

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 20/75 (26%), Gaps = 16/75 (21%)

Query: 300 QDPGKINAMASTKI----------EFYSRNNT-YMHDTPEPILFNNVVRFETSGCVRVRN 348
           +                        F   +    +H T  P L        + GC+R+RN
Sbjct: 253 RPADPNGPWGPYAFGLSGFSDVITRFNGADGIIGLHGTNRPDLVGTD---ASHGCIRLRN 309

Query: 349 II--DLDVWLLKDTP 361
                L   L   TP
Sbjct: 310 ADIEKLAGILPVGTP 324


>gi|84495100|ref|ZP_00994219.1| hypothetical protein JNB_09879 [Janibacter sp. HTCC2649]
 gi|84384593|gb|EAQ00473.1| hypothetical protein JNB_09879 [Janibacter sp. HTCC2649]
          Length = 282

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           + +  WP L +  + LG+   +V+ ++        +     +  +F    ++AV+ +Q  
Sbjct: 207 VGQLDWPALIV-TVKLGDKGEAVKAVQT------LVPGGLTVDGSFGPSTDAAVRNYQTM 259

Query: 149 HGLDPSGMVDSSTL 162
                 G+V  +T 
Sbjct: 260 FSPPSDGIVGPNTW 273



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +    G  S +V  ++  L   G    +     +F    ++AV  FQ   GL   G+V
Sbjct: 7   PWKTASQGAVSQAVSGIQYLLKAHG---HAVATDGSFGPGTKAAVIAFQKAKGLPADGVV 63

Query: 158 DSSTLEAMNV 167
            + T + + +
Sbjct: 64  GTVTWQKLVI 73



 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 42/133 (31%), Gaps = 13/133 (9%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHL----GNSSVSVQRLRE--RLIISGDLDPSKGLSVAF 134
           A    + + + G    +  + L +    G++  +V+ +++   L   GD      +  ++
Sbjct: 50  AFQKAKGLPADGVVGTVTWQKLVIATSSGSAGDAVRAVQQFGLLSSPGD--EPLVVDGSY 107

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-PVDLR----IRQLQVNLMRIKKLLEQ 189
                + VK  Q   GL   G         ++      R    ++Q        + L  Q
Sbjct: 108 GPTTTARVKDLQRSWGLTMDGAAGQEAWSFLSTFAPGPRPWPLVKQGATQATNWRVLAAQ 167

Query: 190 KMGLRYVLVNIPA 202
            +   +       
Sbjct: 168 HLLRAHGATITAD 180


>gi|260427862|ref|ZP_05781841.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
 gi|260422354|gb|EEX15605.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
          Length = 184

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 47/186 (25%), Gaps = 47/186 (25%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP 229
            R       +   +    + +G   ++ +  + +L     +G         V   D  T 
Sbjct: 32  QRRNISSFAMQDWRDHF-ETLGKGAIVADTASRALHFWSGDGSDYRVYPTSVPLTDELTK 90

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             ++ I R    P W    S +++                                 DW 
Sbjct: 91  RGYTEIVRKKVGPSWTPTASQMERYP-------------------------------DWK 119

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNI 349
                       PG  N + +  +         +H T +        R  + GC+ + N 
Sbjct: 120 PIG---------PGPDNPLGTHAMYLGWPAYI-IHGTHDTRKIG---RRSSDGCIGLYN- 165

Query: 350 IDLDVW 355
             +   
Sbjct: 166 EKIAEL 171


>gi|118595120|ref|ZP_01552467.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
 gi|118440898|gb|EAV47525.1| ErfK/YbiS/YcfS/YnhG [Methylophilales bacterium HTCC2181]
          Length = 160

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 45/170 (26%)

Query: 202 AASLEAVENGKVGLRSTVIVG-------RVDRQTPILHSRINRIM-FNPYWV--IPRSII 251
           +  L   + G++     V          +   +TP+ +  I  ++  N      I     
Sbjct: 11  SQKLSLFQEGELVSSYKVSTALKGVGQEKNTNKTPLGNHIIRAMIGRNLPIYAVIKARRY 70

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI---NAM 308
             ++      DP                      VDW              GK    N +
Sbjct: 71  TNEIWTKELDDPS-------------------ITVDW-----ILSRVIWLSGKDLGRNRL 106

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWL 356
            +       +   Y+H T E  L        + GC+R+   ++I+L   +
Sbjct: 107 GNVDTM---QRYIYIHGTNEEHLLGTPS---SHGCIRMSNEDVIELFDLV 150


>gi|298290899|ref|YP_003692838.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296927410|gb|ADH88219.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 191

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 51/185 (27%), Gaps = 46/185 (24%)

Query: 179 NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRI 238
           ++ R       K     +++N     L  V+     LR  + VGR D         + R 
Sbjct: 46  SIRRTVVPYNGKYAPGTIIINTSERRLYLVQPNGSALRYGIGVGR-DGFRWSGVKTVTRK 104

Query: 239 MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIF 298
              P W  P  ++Q+                                        P+   
Sbjct: 105 AEWPSWTPPAQMLQRR---------------------------------------PDLPR 125

Query: 299 RQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
               G  N + +  +         +H + EP          +SGC R+ N  + DL   +
Sbjct: 126 YMPGGIDNPLGARALYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTNDDVTDLYERV 181

Query: 357 LKDTP 361
              T 
Sbjct: 182 RVGTK 186


>gi|111224313|ref|YP_715107.1| hypothetical protein FRAAL4924 [Frankia alni ACN14a]
 gi|111151845|emb|CAJ63565.1| hypothetical protein; Putative peptidoglycan binding domain
           [Frankia alni ACN14a]
          Length = 200

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            VQ+++++L   G       +   F       VK +Q++HGL   G+V   T  ++ +
Sbjct: 146 DVQQIQQKLANLGY---PIQVDGQFGYQTNHMVKDYQLKHGLLVDGVVGPQTRASLGI 200


>gi|320354090|ref|YP_004195429.1| peptidoglycan-binding domain 1 protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122592|gb|ADW18138.1| Peptidoglycan-binding domain 1 protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 313

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM- 165
               V++++  L  +G     + +   +    E A+K +Q   G++ +G + + T  ++ 
Sbjct: 17  RGEVVRQIQVALRAAG--ADPEEIDGIYGGDTEKALKAYQQAKGMESNGKITTETWSSLM 74

Query: 166 -NVPVDLRIRQLQVN 179
              P  L  R LQ+ 
Sbjct: 75  GEAPPSLFARCLQLT 89


>gi|148252294|ref|YP_001236879.1| ErfK/YbiS/YcfS/YnhG domain-containing protein [Bradyrhizobium sp.
           BTAi1]
 gi|146404467|gb|ABQ32973.1| putative exported protein of unknown function with
           ErfK/YbiS/YcfS/YnhG domain [Bradyrhizobium sp. BTAi1]
          Length = 197

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 19/185 (10%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +  G +  LV      L          R  V+  R     P     ++    + Y V P
Sbjct: 28  SEDPGDQPGLVADDGYEL------DPEWRKQVVYYR--TTEPPGTIIVSTSERHLYLVQP 79

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
                +  + + R      +   +  I +K +              P        G  N 
Sbjct: 80  GGRAIRYGIGVGRDG---FQWQGLLSITKKAEWPDWTPPPEMIQRQPYLPRFMAGGPGNP 136

Query: 308 MASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWS 364
           + +  +        Y +H T +P          +SGC R+   ++ DL   +   T    
Sbjct: 137 LGARAMYL--GTTVYRIHGTNQPWTIGTK---ISSGCFRLVNTDVADLYDRVPVGTKVVV 191

Query: 365 RYHIE 369
           +   E
Sbjct: 192 KQKPE 196


>gi|291547836|emb|CBL20944.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. SR1/5]
          Length = 424

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G +   VQ+++E+L  I       PS  +   +     ++VK FQ   GL  S
Sbjct: 340 PGYDLTIGVTGEKVQQIQEQLNAIAKAYPAIPSVTVDGIYGPATAASVKKFQNIFGLPAS 399

Query: 155 GMVDSSTLEAMN 166
           G+VD  T   + 
Sbjct: 400 GVVDYPTWYKIQ 411


>gi|282911000|ref|ZP_06318802.1| peptidase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282324695|gb|EFB55005.1| peptidase [Staphylococcus aureus subsp. aureus WBG10049]
          Length = 496

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G        S  FD  +E+ VK FQ  + L+ +G  +
Sbjct: 409 TKTFIVGDDDKNIKTIKIGLSALGY--KVDNESTQFDQALENLVKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|163732909|ref|ZP_02140353.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161393444|gb|EDQ17769.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 227

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 42/160 (26%), Gaps = 27/160 (16%)

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
            +                   P     +   +     ++P  I    +   L        
Sbjct: 43  WDARVTPANYNPATTNPWGLHPRF---LPVRVEANSGLVPGDIHVDAVARYLYHVQGDGT 99

Query: 268 DNNIHMIDEKGKEVFVE------EVDWNSPEPPNFIFRQDP------------GKINAMA 309
                +   +G            +  W    P   + R+DP            G  N + 
Sbjct: 100 AMRYGVAIARGNLYEPGVFTIRRKARWPKWTPTADMIRRDPELYTEFADGMPGGPGNPLG 159

Query: 310 STKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           +  +     +R+    +H TP P    +     +SGCVR+
Sbjct: 160 ARALYLYEGNRDTYLRIHGTPSPRSIGSR---ASSGCVRM 196


>gi|110803522|ref|YP_699813.1| spore cortex-lytic enzyme SleC [Clostridium perfringens SM101]
 gi|110684023|gb|ABG87393.1| spore cortex-lytic enzyme SleC [Clostridium perfringens SM101]
 gi|226844841|gb|ACO87301.1| SleC [Clostridium perfringens]
 gi|226844845|gb|ACO87303.1| SleC [Clostridium perfringens]
          Length = 438

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      AVK FQ    L  +
Sbjct: 329 PGYTLKFGYSGEPVRVIQEQLNAISRAYPLIPKIAVDGKYGPKTREAVKTFQKIFDLPQT 388

Query: 155 GMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G VD +T   ++       +I +L+ ++ +        M  R  +  I
Sbjct: 389 GEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRRENVPKI 436


>gi|47564877|ref|ZP_00235921.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
 gi|47558250|gb|EAL16574.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
          Length = 741

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 15/163 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           I    L++    +     D  + +    + N  +     +   G         + T    
Sbjct: 139 IFKAFLTMDAYRLTPGG-DAKVRQIQQDLNNKYYKTSGVQPTDG------HYQRGTNKAL 191

Query: 79  EKAIAFYQDILSRGGWPEL-PIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
              +     I +      + P        L +G+S   V   +  L  +G    S   S 
Sbjct: 192 VYGLQTEMGIAAGSQTGSIGPATKNGLPILKVGSSGRFVTLFQYALYFNGH--DSGSFST 249

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            ++  VESAVK FQ    L   G+ + ST  +  V      R+
Sbjct: 250 TYNTNVESAVKKFQGFTLLPQDGVANKSTWLSALVSTGDPDRK 292


>gi|218677968|ref|ZP_03525865.1| hypothetical protein RetlC8_03512 [Rhizobium etli CIAT 894]
          Length = 124

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 8/94 (8%)

Query: 298 FRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDV 354
           F +     N +    +  +          H T EP          +SGC+R+ N   +D 
Sbjct: 35  FVEGGSPKNPLGPRAMYLHRDGVDTGYRFHGTLEPWSIGKD---ASSGCIRMFNEDAID- 90

Query: 355 WLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPV 388
            L +  P  +   +   +  +  +  +++   PV
Sbjct: 91  -LYQRCPIGTAVQVLPHIADQAESATQVSQTTPV 123


>gi|158314338|ref|YP_001506846.1| peptidoglycan binding domain-containing protein [Frankia sp.
           EAN1pec]
 gi|158109743|gb|ABW11940.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EAN1pec]
          Length = 256

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 5/66 (7%)

Query: 98  PIRPLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
               + LG   V   V  +++RL   G       +   F       V  FQ ++GL P G
Sbjct: 188 SSGYMRLGVEGVRWDVALVQKRLADIGY---PITVDGRFGPQTNHMVVDFQKKNGLVPDG 244

Query: 156 MVDSST 161
           +V   T
Sbjct: 245 VVGPLT 250


>gi|332706811|ref|ZP_08426872.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
 gi|332354695|gb|EGJ34174.1| N-acetylmuramoyl-L-alanine amidase [Lyngbya majuscula 3L]
          Length = 306

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 17/106 (16%)

Query: 69  IISKETIAQTE--KAIA--FYQDILSRGGWPEL----PIRPLHLG-NSSVSVQRLRERLI 119
            + + TIA  +  +AI       I     W  +        L        +V+ L+ R  
Sbjct: 207 SLDQATIAAIKTFQAIVGINQTGIGDSTTWKTINQILEQPILRPNHAGGTTVKYLQRR-- 264

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                         F +   SAV  FQ + GL   G+V + T   +
Sbjct: 265 ------VGTQADGIFGSGTASAVIRFQKQQGLTADGIVGAQTWSQL 304


>gi|325292222|ref|YP_004278086.1| hypothetical protein AGROH133_04588 [Agrobacterium sp. H13-3]
 gi|325060075|gb|ADY63766.1| hypothetical protein AGROH133_04588 [Agrobacterium sp. H13-3]
          Length = 302

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 97/322 (30%), Gaps = 70/322 (21%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
           D      D+ +    P+ +  +++   +              PELP +    G  S    
Sbjct: 32  DTSRMNPDVFVQETAPVFNFNSVSSNRQ--------------PELPPQ---PGQLSTRPP 74

Query: 113 RL-RERLIISGDLDPSKGLSVAFDAYVESA-VKLFQ---MRHGLDPSG----MVDSSTLE 163
            L R R        P           V+   V   Q   M +GL  S     ++     +
Sbjct: 75  DLFRTRFHQE--YGPPVRGQGLSAPQVQGLNVPQAQGQAMAYGLPVSNPLHRVMYGPIRD 132

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
                  +   ++    +R +   +       ++V+     L  V+ G   +R  V +GR
Sbjct: 133 DGRSLPAIPYGRIDPRYLRQEVSYQTAEAPGTIVVDTKQHFLYLVQPGGKAIRYGVGLGR 192

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
            D        +I      P W  P  ++++                              
Sbjct: 193 -DGYAWSGRGKIQWKAKWPRWTPPDEMVRRQ----------------------------P 223

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFET 340
           E    ++           PG  N + +  +      ++  Y +H TP+           +
Sbjct: 224 ELTSISAANGGMT-----PGLNNPLGARALYIFKDGKDTLYRVHGTPDWQSVGK---ATS 275

Query: 341 SGCVRV--RNIIDLDVWLLKDT 360
           SGCVR+  +++IDL   + K  
Sbjct: 276 SGCVRMLNQDVIDLYERVPKGA 297


>gi|297563587|ref|YP_003682561.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296848035|gb|ADH70055.1| ErfK/YbiS/YcfS/YnhG family protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 249

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 25/104 (24%), Gaps = 20/104 (19%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-----------RNNTYMH 324
             G+                    Q P                               +H
Sbjct: 153 GTGEGETPTPEGRYYFTE----LLQPPDPEGPYGVYAFGLSGFSETLETFAGGPGQLAVH 208

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
            T +        R  + GCVRV N  D+  W+ ++ P  +   I
Sbjct: 209 GTNDEDALG---REISHGCVRVSN-EDI-TWMAENLPIGTPVEI 247


>gi|168044978|ref|XP_001774956.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673703|gb|EDQ60222.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 294

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGM 156
            LG     +  L+  L+  G +  +         S  FD+  + A++ +Q   GL  +G 
Sbjct: 11  KLGEVRAGMANLKMYLLQFGYISSADAPPAGSSFSEEFDSITQKAIQNYQRSFGLPVTGN 70

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNL 180
           +D +TL  M +P   R   +   L
Sbjct: 71  LDLATLTQMIIPRCGREDVINGTL 94


>gi|16078346|ref|NP_389164.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309139|ref|ZP_03590986.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313466|ref|ZP_03595271.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318388|ref|ZP_03599682.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322662|ref|ZP_03603956.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|731171|sp|P39800|XLYA_BACSU RecName: Full=N-acetylmuramoyl-L-alanine amidase XlyA; AltName:
           Full=Autolysin; AltName: Full=Cell wall hydrolase;
           Flags: Precursor
 gi|496176|gb|AAA22645.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|535797|emb|CAA85403.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
 gi|1225965|emb|CAA94049.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|2633635|emb|CAB13138.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 297

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              S   V +++  L            + G+   +      AV  FQ  +GL   G+   
Sbjct: 227 PYTSGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGP 286

Query: 160 STLEAMNV 167
           +T E +  
Sbjct: 287 ATKEKIAA 294


>gi|27382343|ref|NP_773872.1| hypothetical protein blr7232 [Bradyrhizobium japonicum USDA 110]
 gi|27355514|dbj|BAC52497.1| blr7232 [Bradyrhizobium japonicum USDA 110]
          Length = 205

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 41/167 (24%), Gaps = 44/167 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R             ++VN     L  V      LR  + VGR D        RI      
Sbjct: 62  RTTVNYSGNYAPGTIVVNTSERRLYLVLQNGQALRYGIGVGR-DGFRWGGVHRITAKKEW 120

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++ +                                        P+      
Sbjct: 121 PDWTPPSQMLARR---------------------------------------PDLPRHMK 141

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +         +H + EP          +SGC R+ N
Sbjct: 142 GGIENPLGARAMYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMTN 184


>gi|85859357|ref|YP_461559.1| putative peptidoglycan binding protein [Syntrophus aciditrophicus
           SB]
 gi|85722448|gb|ABC77391.1| putative peptidoglycan binding protein [Syntrophus aciditrophicus
           SB]
          Length = 300

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 1/66 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +     Q L+  L   G  DP   +   F      AV  FQ   G+   G    +T  A+
Sbjct: 234 DKGDKTQWLQNALNQLG-ADPKLTVDGRFGPATRRAVMKFQTTAGIPADGKAGPATEAAI 292

Query: 166 NVPVDL 171
              +  
Sbjct: 293 KEKLAK 298


>gi|319892421|ref|YP_004149296.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162117|gb|ADV05660.1| Probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 509

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 83  AFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A Y++I        +P +   H G     V+ ++  L   G       +   ++A +  A
Sbjct: 410 ADYENI------SVIPTKTTYHQGQEDKHVKSIKIGLKALGY--DVGTIDEHYNAQLTIA 461

Query: 142 VKLFQMRHGLDPSGMVDSST 161
           VK FQ ++ L  +GM +  T
Sbjct: 462 VKQFQQKNDLTANGMFNKET 481


>gi|227834354|ref|YP_002836061.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
 gi|262183086|ref|ZP_06042507.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455370|gb|ACP34123.1| putative hydrolase [Corynebacterium aurimucosum ATCC 700975]
          Length = 394

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 12/80 (15%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQM 147
           R L +G+ SV V   R  L   G +                     FD+ +   +K FQ 
Sbjct: 3   RVLRVGDQSVRVAEARATLARLGLMTDYQGTLSDWKKQKYSEADKHFDSELAEVLKAFQQ 62

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
             G+ PSG +D  TL  +  
Sbjct: 63  SRGIVPSGDIDELTLRELRQ 82



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH--------------LG--NSS 108
           S+        +A+  KA    + I+  G   EL +R L                G     
Sbjct: 43  SEADKHFDSELAEVLKAFQQSRGIVPSGDIDELTLRELRQASYTLGARVLAYEPGNVQVG 102

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V +L+++L   G       +   F A   +A+  +Q+  GL   G+    T+ A+N
Sbjct: 103 DDVSQLQQQLQELGFYQER--IDGNFGARTYAALAEYQLNSGLRSDGICGPETINALN 158


>gi|308071058|ref|YP_003872663.1| Periplasmic protease [Paenibacillus polymyxa E681]
 gi|305860337|gb|ADM72125.1| Periplasmic protease [Paenibacillus polymyxa E681]
          Length = 488

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + L    +S  V+  +  L   G           FD   ES+V  FQ +  L  S
Sbjct: 386 PLNKEKSLKYNMNSSDVKNAQIILQGLGY--RPGREDGYFDKVTESSVIAFQKQAKLTAS 443

Query: 155 GMVDSSTLEAMNVPVDLRIR------QLQVNLMRIK 184
           G++D+ T  AM   +  +IR      QL+  +  I+
Sbjct: 444 GIIDAKTAAAMEAKLIKKIRDPKNDNQLKQGIEEIR 479


>gi|150397906|ref|YP_001328373.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
 gi|150029421|gb|ABR61538.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
          Length = 405

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +      IA Y  +  R  WP  P   L +         L+ RL   G  D    +   F
Sbjct: 322 VGLLADQIAGYAGMQQR--WPR-PDGSLDI----SEKFELQNRLKELGYYDGE--VDGNF 372

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +  ++A++ FQ ++GL P G      L A+  
Sbjct: 373 GSGSKAAIEAFQAQNGLKPDGQPTQHLLRALRR 405


>gi|91974955|ref|YP_567614.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91681411|gb|ABE37713.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 175

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 41/163 (25%), Gaps = 45/163 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++V      L  V      +R  V VG+  ++     ++I+    NP W  
Sbjct: 37  FRGDYSPGTIVVKTNERRLYLVVEPGQAVRYPVGVGKAGKR-WEGVTKIDGKYRNPAWSP 95

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + P        G   
Sbjct: 96  PADVKR---------------------------------------DNPAIPDVIPGGTPE 116

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    +         +H T  P        F + GC+R+ N
Sbjct: 117 NPMGVAAMTLAGGE-YAIHGTNRPNSVG---GFVSYGCIRMLN 155


>gi|316931817|ref|YP_004106799.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315599531|gb|ADU42066.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 175

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 41/163 (25%), Gaps = 45/163 (27%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                    ++V      L  V      +R  V VG+  +Q     ++I+    NP W  
Sbjct: 37  FRGDYSPGTIVVRTAERRLYLVVEPGHAVRYPVGVGKAGKQ-WAGITKIDGKYRNPAWAP 95

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KI 305
           P  + +                                       + P        G   
Sbjct: 96  PADVKR---------------------------------------DVPAIPDVIPGGSPA 116

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           N M    +         +H T  P        F + GC+R+ N
Sbjct: 117 NPMGVAAMTLEGGE-YAIHGTNRPQSIG---GFVSYGCIRMLN 155


>gi|255767329|ref|YP_003097723.1| hypothetical protein BSU14071 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|269849598|sp|O34320|FADG_BACSU RecName: Full=Uncharacterized protein fadG
 gi|225184956|emb|CAX52614.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 576

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 18  LILPMGLSLVEKPIHASVLDEIIN----------ESYHSIVNDRFDNFLARVDMGIDSDI 67
           + L MGLS  +  +   V   ++N                +    +N     +      +
Sbjct: 113 MQLHMGLSKTDGVVTPKVFKALLNMDSYILLNGASEKVRSIQQWLNNKYYNRENF--YFM 170

Query: 68  P---IISKETIAQTEKAIAFYQDI---LSRGGWPELPIR---PLHLGNSSVS---VQRLR 115
           P   + S++T      AI + + +   ++ G +     R    L +G +      +   +
Sbjct: 171 PCDGLYSRDTQKSLVYAIQYEEGLSDSIANGNFGPTTQRLIPVLRIGETDEKNSFIHLFQ 230

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
             LI +G    +      +   V S VK FQ    L  SG  D  T  ++ V     
Sbjct: 231 AALIFNGY---NVPFDGVYSESVRSKVKAFQSFAKLQQSGTADFQTWASLLVSTGDP 284



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
           V+ ++  L   G      GL+  F    + A+   Q+  GL    G+V     +A+
Sbjct: 81  VKIIQGALYCKGY--GPGGLTGTFGQGTKEAIAEMQLHMGLSKTDGVVTPKVFKAL 134


>gi|221309276|ref|ZP_03591123.1| hypothetical protein Bsubs1_07816 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221318525|ref|ZP_03599819.1| hypothetical protein BsubsJ_07686 [Bacillus subtilis subsp.
           subtilis str. JH642]
          Length = 786

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 18  LILPMGLSLVEKPIHASVLDEIIN----------ESYHSIVNDRFDNFLARVDMGIDSDI 67
           + L MGLS  +  +   V   ++N                +    +N     +      +
Sbjct: 128 MQLHMGLSKTDGVVTPKVFKALLNMDSYILLNGASEKVRSIQQWLNNKYYNRENF--YFM 185

Query: 68  P---IISKETIAQTEKAIAFYQDI---LSRGGWPELPIR---PLHLGNSSVS---VQRLR 115
           P   + S++T      AI + + +   ++ G +     R    L +G +      +   +
Sbjct: 186 PCDGLYSRDTQKSLVYAIQYEEGLSDSIANGNFGPTTQRLIPVLRIGETDEKNSFIHLFQ 245

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
             LI +G    +      +   V S VK FQ    L  SG  D  T  ++ V     
Sbjct: 246 AALIFNGY---NVPFDGVYSESVRSKVKAFQSFAKLQQSGTADFQTWASLLVSTGDP 299



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
           V+ ++  L   G      GL+  F    + A+   Q+  GL    G+V     +A+
Sbjct: 96  VKIIQGALYCKGY--GPGGLTGTFGQGTKEAIAEMQLHMGLSKTDGVVTPKVFKAL 149


>gi|119775164|ref|YP_927904.1| membrane-bound lytic transglycolase-like protein [Shewanella
           amazonensis SB2B]
 gi|119767664|gb|ABM00235.1| membrane-bound lytic transglycolase-related protein [Shewanella
           amazonensis SB2B]
          Length = 401

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 2/80 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G  P     PL    +   ++ ++++LI  G             +   +A++ FQ R+ 
Sbjct: 319 NGAKPLKVAPPLQPRRTRDGLKAMQQKLIELGY--DIGAADGIIGSKTSAAIRDFQRRNK 376

Query: 151 LDPSGMVDSSTLEAMNVPVD 170
           L P G  D +TL A+ + V 
Sbjct: 377 LVPDGFADDATLNALGLDVA 396


>gi|2632228|emb|CAA10870.1| YkuG protein [Bacillus subtilis]
          Length = 760

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 18  LILPMGLSLVEKPIHASVLDEIIN----------ESYHSIVNDRFDNFLARVDMGIDSDI 67
           + L MGLS  +  +   V   ++N                +    +N     +      +
Sbjct: 113 MQLHMGLSKTDGVVTPKVFKALLNMDSYILLNGASEKVRSIQQWLNNKYYNRENF--YFM 170

Query: 68  P---IISKETIAQTEKAIAFYQDI---LSRGGWPELPIR---PLHLGNSSVS---VQRLR 115
           P   + S++T      AI + + +   ++ G +     R    L +G +      +   +
Sbjct: 171 PCDGLYSRDTQKSLVYAIQYEEGLSDSIANGNFGPTTQRLIPVLRIGETDEKNSFIHLFQ 230

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
             LI +G    +      +   V S VK FQ    L  SG  D  T  ++ V     
Sbjct: 231 AALIFNGY---NVPFDGVYSESVRSKVKAFQSFAKLQQSGTADFQTWASLLVSTGDP 284



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
           V+ ++  L   G      GL+  F    + A+   Q+  GL    G+V     +A+
Sbjct: 81  VKIIQGALYCKGY--GPGGLTGTFGQGTKEAIAEMQLHMGLSKTDGVVTPKVFKAL 134


>gi|320095837|ref|ZP_08027475.1| choline binding protein A [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319977226|gb|EFW08931.1| choline binding protein A [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 416

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G + + V  ++ RL I   +  +       DA   +AVK FQ R GL  +G+V
Sbjct: 192 STNTLTWGMNGIKVMIVQRRLGIWHTMKLASV-----DASFVTAVKNFQWRAGLSQTGVV 246

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           D  T  AM       I Q Q   + + 
Sbjct: 247 DEQTWNAMGTGWPWTIDQYQAQPVPLT 273


>gi|104782728|ref|YP_609226.1| hypothetical protein PSEEN3719 [Pseudomonas entomophila L48]
 gi|95111715|emb|CAK16439.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 174

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+           + GCVR+RN   LD  L    P   R  I+E 
Sbjct: 118 IYLHGTPDTEPMGI---ALSHGCVRLRNADLLD--LFDRVPAGCRVRIDEA 163


>gi|154509521|ref|ZP_02045163.1| hypothetical protein ACTODO_02053 [Actinomyces odontolyticus ATCC
           17982]
 gi|153799155|gb|EDN81575.1| hypothetical protein ACTODO_02053 [Actinomyces odontolyticus ATCC
           17982]
          Length = 513

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L  G +   V+  + RL +      S  L+   DA   +AVK FQ R GL  +G+V
Sbjct: 289 ATNTLTWGMNGTKVRIAQVRLGLW----HSNKLASV-DAPFVAAVKNFQQRAGLPVTGVV 343

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIK 184
           D +T +AM+      + Q Q   + + 
Sbjct: 344 DKATWDAMDTGYPWTVDQYQATPLPLT 370


>gi|289665239|ref|ZP_06486820.1| hypothetical protein XcampvN_19755 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 212

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 114 LRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L+ +L   G +            F A  + AV+ FQ  HGL   G+V   T  A+  
Sbjct: 4   LQSQLAQLGVVGRDGKPLHADGDFGANTKYAVEQFQREHGLHVDGVVGRQTQAALGQ 60


>gi|227824066|ref|YP_002828039.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium fredii NGR234]
 gi|227343068|gb|ACP27286.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium fredii NGR234]
          Length = 224

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 47/187 (25%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+R    P W  P  + ++     L     
Sbjct: 81  LYLIMENKTAIRYGVGVGREGFK-WYGRATIDRKSLWPRWTPPPEMRERH--PEL----- 132

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF---YSRNNT 321
                              E VD                  N +    +           
Sbjct: 133 ------------------PESVD-------------GGSPKNPLGPRAMYLLRDGVDTGY 161

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
            +H T EP          +SGC+R+ N   +D  L +  P  +   +   +  +  +  +
Sbjct: 162 RLHGTLEPGSIGKD---ASSGCIRMFNEDAID--LYQRCPIGTAVQVLPHIADQAESAAE 216

Query: 382 LATEVPV 388
           ++   PV
Sbjct: 217 VSQATPV 223


>gi|188586802|ref|YP_001918347.1| carboxyl-terminal protease [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351489|gb|ACB85759.1| carboxyl-terminal protease [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 476

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 21/125 (16%)

Query: 77  QTEKAIAFY-----QDILSRGGWPEL---PIRPLHL-----------GNSSVSVQRLRER 117
             +  +A Y     +DI   G  P++   P + L L           G+    V+ L+  
Sbjct: 343 ALQYTMAKYQTPDGRDIHEEGLNPDVEIDPPKILELTRQPISTDLSMGDEGEEVETLQSI 402

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L               FD +   A++ FQ   G+  +G ++   +   +  ++  + +  
Sbjct: 403 LKELDYFTEEVT--GEFDEHTRDALEKFQQARGISATGEMEDMVIREFHDMIEEYLEEDD 460

Query: 178 VNLMR 182
             L R
Sbjct: 461 EKLER 465


>gi|86751039|ref|YP_487535.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86574067|gb|ABD08624.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 193

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 46/161 (28%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++     L  V      LR  + VGR D        RI      P W  P  ++++  
Sbjct: 65  IVISTSERRLYLVGADGTALRYGIGVGR-DGFRWSGTHRITAKKEWPSWTPPAQMLRRR- 122

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                                 P+       G+ N + +  +  
Sbjct: 123 --------------------------------------PDLPRHMAGGEDNPLGARAMYL 144

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
                  +H + EP          +SGC R+ N  + DL  
Sbjct: 145 G-STLYRIHGSNEPETIGQ---AVSSGCFRMTNEDVKDLYE 181


>gi|17229353|ref|NP_485901.1| hypothetical protein all1861 [Nostoc sp. PCC 7120]
 gi|17130951|dbj|BAB73560.1| all1861 [Nostoc sp. PCC 7120]
          Length = 269

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L LG+   +V  ++  + +          +  + A     V+ FQ  +GL   G+V   
Sbjct: 139 TLRLGSRGQAVSAVQRAIGVE--------PTGYYGAVTARRVREFQANNGLRADGIVGPQ 190

Query: 161 TLEAM 165
           T  A+
Sbjct: 191 TRNAL 195



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 12/92 (13%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
           QT  A+       ++   P      L  G+   +V  ++  L +          +  +  
Sbjct: 190 QTRNALFR----GNQNQPPTGGPVTLGFGSRGSAVSEVQRALGVE--------PTGYYGT 237

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                V+ FQ  +GL   G+V   T  A+   
Sbjct: 238 VTVRRVREFQANNGLRVDGVVGPETRSALFRS 269


>gi|83943599|ref|ZP_00956058.1| hypothetical protein EE36_01820 [Sulfitobacter sp. EE-36]
 gi|83845831|gb|EAP83709.1| hypothetical protein EE36_01820 [Sulfitobacter sp. EE-36]
          Length = 222

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 62/192 (32%), Gaps = 51/192 (26%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D +T     V      R ++ N            G  +  V+  A  L  +++    +R 
Sbjct: 48  DPATTNPWGVAPRFLPRLVEAN-------PGLTPGDIH--VDAVARYLYHIQDNGTAMRY 98

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V + R D   P     I R    P W   +++I        R+DP+  + +     D  
Sbjct: 99  GVAIARGDLYEP-GTYSIKRKAKWPTWTPTQNMI--------RRDPELYEQH----ADG- 144

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNN 334
                                  D G  N + S  +     +R+    +H +P P     
Sbjct: 145 ----------------------MDAGPQNPLGSRALYLFVGNRDTYLRIHGSPNPQSIG- 181

Query: 335 VVRFETSGCVRV 346
             R  +SGCVR+
Sbjct: 182 -GRA-SSGCVRM 191


>gi|116072872|ref|ZP_01470137.1| hypothetical protein BL107_10197 [Synechococcus sp. BL107]
 gi|116064398|gb|EAU70159.1| hypothetical protein BL107_10197 [Synechococcus sp. BL107]
          Length = 166

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 51/179 (28%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R ++L         +L+++    +  + +G++     V +G     TP     I     N
Sbjct: 25  RAEELALNAPSPSRILLDLQRREISVMLDGRMHGSWPVAIGDPKTPTPQGEFSILTKEMN 84

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P +V  +S  +K++                                              
Sbjct: 85  PIYVSEKSGQRKEL---------------------------------------------- 98

Query: 302 PGKINAMASTKIEFY-SRNNT-YMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            G  + +    + F+ +      +H TP P          + GCVR+ N  +  L   +
Sbjct: 99  SGPTSPIGDRYLVFHRNGRGEFGIHGTPWPHWV-KTRAAVSLGCVRMLNVHVRQLFDLV 156


>gi|307273110|ref|ZP_07554356.1| peptidase [Enterococcus faecalis TX0855]
 gi|306510095|gb|EFM79119.1| peptidase [Enterococcus faecalis TX0855]
          Length = 477

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 388 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLLVTGEID 445

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 446 NETATKIEATLGKLI 460


>gi|256965014|ref|ZP_05569185.1| carboxyl-terminal protease [Enterococcus faecalis HIP11704]
 gi|256955510|gb|EEU72142.1| carboxyl-terminal protease [Enterococcus faecalis HIP11704]
          Length = 480

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L  G+ S  +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D
Sbjct: 391 DKTLKEGDQSEDIQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLLVTGEID 448

Query: 159 SSTLEAMNVPVDLRI 173
           + T   +   +   I
Sbjct: 449 NETATKIEATLGKLI 463


>gi|302532770|ref|ZP_07285112.1| predicted protein [Streptomyces sp. C]
 gi|302441665|gb|EFL13481.1| predicted protein [Streptomyces sp. C]
          Length = 138

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L+  L     LD + GL   + A  E+AV+  Q R+GL   G+   ST   
Sbjct: 62  GSSGDHVLALQHALQGCQGLD-TGGLDGIYGAKTEAAVRTLQSRNGLSVDGVYGPSTRNV 120

Query: 165 MN 166
           ++
Sbjct: 121 IS 122


>gi|251799692|ref|YP_003014423.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
 gi|247547318|gb|ACT04337.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
          Length = 486

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L        ++  +  L   G           ++A  E AVK FQ   GL  +G +D
Sbjct: 395 TETLRKDMLGEQIRNAQVMLSGLGYATQR--EDGYYNASTEQAVKDFQNASGLPVTGEID 452

Query: 159 SSTLEAMNVPVDLRIR 174
           + T  ++   V   I+
Sbjct: 453 TKTAASLEQAVVKWIK 468


>gi|114564147|ref|YP_751661.1| peptidoglycan binding domain-containing protein [Shewanella
           frigidimarina NCIMB 400]
 gi|114335440|gb|ABI72822.1| Peptidoglycan-binding domain 1 protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 557

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W    I P  +G SS    VQ L   L +         L   FD+ +E  +  FQ +HGL
Sbjct: 468 WQPDSILPREIGQSSSLAQVQWLENSLALVN--KRRARLLTQFDSELEQQLMTFQRQHGL 525

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            P G+  + TL  +N+ +  +  +L  + +R
Sbjct: 526 KPDGIAGNQTLVQLNLYLSQQGPRLSASEVR 556


>gi|319405258|emb|CBI78869.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
          Length = 229

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 10/121 (8%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ--DPGKINAMASTKIE-FYS 317
           ++        I     +       +              Q   PG  N + +     F +
Sbjct: 110 KEGLAFTGVGIVQYKRRWPRWAPTKAMMEREPERYGHLGQGMPPGPENPLGARAFYLFKN 169

Query: 318 RNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVK 373
             +T   +H + E        R  +SGC+R+  ++IIDL   +   +      + E  + 
Sbjct: 170 GKDTLFRIHGSHEAWSIG---RAISSGCIRLLNQDIIDLYNRVPDGSRVVVLQNSENTLN 226

Query: 374 T 374
            
Sbjct: 227 G 227


>gi|303239377|ref|ZP_07325905.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
 gi|302593163|gb|EFL62883.1| ErfK/YbiS/YcfS/YnhG family protein [Acetivibrio cellulolyticus CD2]
          Length = 235

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 4/81 (4%)

Query: 88  ILSRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           I+  G +         L  G+    V  ++++L   G        +  ++  ++ A+  F
Sbjct: 152 IIKNGSFGPFGTGFRELLPGDRGADVLAVQQKLKTLGYFHS--KETGIYEDDLKYALHKF 209

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q    L+    +  +   AM 
Sbjct: 210 QKDKKLEVKNAITRADYHAMG 230



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 6/56 (10%)

Query: 308 MASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                +    +     +H T E     +     + GC+R+ N  I +L   +   T
Sbjct: 97  FGGRWLGLNVKWGRYGIHGTSEEYTIGS---AASHGCIRMFNKDIKELYNIVPLGT 149


>gi|240137872|ref|YP_002962344.1| hypothetical protein MexAM1_META1p1202 [Methylobacterium extorquens
           AM1]
 gi|240007841|gb|ACS39067.1| conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG
           family protein [Methylobacterium extorquens AM1]
          Length = 273

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 60/193 (31%), Gaps = 45/193 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             V           N+ ++     ++     ++V+     L  V  G   +R  V VG+ 
Sbjct: 44  FPVEAVDPRDLKARNVRQLVDFPSKEPPGT-LVVDPYKRFLYLVMEGGKAMRYVVGVGKA 102

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             +     + + R    P W     ++++D     R                        
Sbjct: 103 GFE-FTGEATVARKASWPRWTPTPDMLRRDPERNGR------------------------ 137

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETS 341
              W +            G  N + +  +      ++  Y +H T EP          +S
Sbjct: 138 ---WAAG--------MPGGDRNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AVSS 183

Query: 342 GCVRV--RNIIDL 352
           GC+R+  +++IDL
Sbjct: 184 GCIRMLNQDVIDL 196


>gi|126664955|ref|ZP_01735938.1| hypothetical protein MELB17_17844 [Marinobacter sp. ELB17]
 gi|126630325|gb|EBA00940.1| hypothetical protein MELB17_17844 [Marinobacter sp. ELB17]
          Length = 166

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 4/45 (8%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            Y+H TP+           + GCVR+RN  DL     +  P    
Sbjct: 123 IYIHGTPDTEPMGTP---LSHGCVRMRNA-DLVALFARLQPGMPV 163


>gi|319406824|emb|CBI80457.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
          Length = 229

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 37/121 (30%), Gaps = 10/121 (8%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ--DPGKINAMASTKIE-FYS 317
           ++        I     +       +              Q   PG  N + +     F +
Sbjct: 110 KEGLAFTGVGIIQYKRRWPSWAPTKAMMEREPERYGHLGQGMPPGPENPLGARAFYLFKN 169

Query: 318 RNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEVVK 373
             +T   +H + E        R  +SGC+R+  ++IIDL   +   +        E  + 
Sbjct: 170 GKDTLFRIHGSHEAWSIG---RAISSGCIRLLNQDIIDLYNRVPDGSRVVVLQDRENTLN 226

Query: 374 T 374
            
Sbjct: 227 G 227


>gi|225166759|ref|YP_002650744.1| hypothetical protein pC2C203U28_p026 [Clostridium botulinum]
 gi|253771353|ref|YP_003034239.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum D
           str. 1873]
 gi|225007423|dbj|BAH29519.1| conserved hypothetical protein [Clostridium botulinum]
 gi|253721330|gb|ACT33623.1| peptidoglycan-binding domain 1 protein [Clostridium botulinum D
           str. 1873]
          Length = 207

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 2/70 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G  + S+  ++  L I+        +   F       VK  Q R GLD  G+V   T
Sbjct: 3   LKKGMQNNSITYIQYGLRIT--CINPGNVDGIFGENTYIGVKKLQQRFGLDVDGIVGPGT 60

Query: 162 LEAMNVPVDL 171
            E +   +  
Sbjct: 61  WEKLKSQIKP 70


>gi|167464747|ref|ZP_02329836.1| Sporulation specific N-acetylmuramoyl-L-alanineamidase, spore
           cortex-lytic enzyme [Paenibacillus larvae subsp. larvae
           BRL-230010]
 gi|322382328|ref|ZP_08056235.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153681|gb|EFX46056.1| spore cortex-lytic enzyme-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 266

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                 +  G     V  L+ R+   G       +   F      +VK FQ   GL   G
Sbjct: 32  TFSKNLVKYGTKGSDVYELQGRMKFLGFYK--GKVDGDFGYQTLQSVKCFQGEFGLQVDG 89

Query: 156 MVDSST 161
           +V   T
Sbjct: 90  LVGPKT 95


>gi|163853780|ref|YP_001641823.1| peptidoglycan binding domain-containing protein [Methylobacterium
           extorquens PA1]
 gi|163665385|gb|ABY32752.1| Peptidoglycan-binding domain 1 protein [Methylobacterium extorquens
           PA1]
          Length = 233

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+  
Sbjct: 4   VADIQRALLARGYDLGKAGADGDAGPRTIAAVTAFQRSAGLVADGIAGPKTQAALQK 60


>gi|260061978|ref|YP_003195058.1| hypothetical protein RB2501_10312 [Robiginitalea biformata
           HTCC2501]
 gi|88783540|gb|EAR14711.1| hypothetical protein RB2501_10312 [Robiginitalea biformata
           HTCC2501]
          Length = 175

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           Y+ +   G       + L  G++   V RL++ L   G           F    E  +K 
Sbjct: 88  YRRLRILGPIG-FSRKTLKKGSTGQDVVRLQDALKQLGF--NCGTSDGIFGPKTEQCLKD 144

Query: 145 FQMRH-GLDPSGMVDSSTLEAMNVPVDLRIR 174
           FQ  +  L  +G  D  T + M   +  R+ 
Sbjct: 145 FQATNESLGITGQFDRKTRDYMVEILSARLN 175


>gi|254696980|ref|ZP_05158808.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254707720|ref|ZP_05169548.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
          Length = 225

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 61  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 119

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 120 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 151

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 152 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 203

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 204 FLNQDIIDLYDRVPAKTP 221


>gi|229056520|ref|ZP_04195927.1| hypothetical protein bcere0026_6430 [Bacillus cereus AH603]
 gi|228720733|gb|EEL72290.1| hypothetical protein bcere0026_6430 [Bacillus cereus AH603]
          Length = 253

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 7/62 (11%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 289 NSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
              +   +  ++  G    N + +  +    +    +H T       +     ++GC+R+
Sbjct: 67  TKYKNKEYHRKKIAGGAPNNPLGTRWLGLDKKE-YAIHGTNREGTIGSRE---SNGCIRM 122

Query: 347 RN 348
            +
Sbjct: 123 HD 124


>gi|188579403|ref|YP_001922848.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179342901|gb|ACB78313.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 282

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 44/184 (23%)

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS 233
           R L+   +R       K     ++V+     L  V  G   +R  V VG+   +     +
Sbjct: 61  RDLKARNVRQVVDYPTKEPPGTLVVDPYRRFLYLVMEGGKAMRYGVGVGKAGFE-FTGEA 119

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            + R    P W     +I++D     R                                 
Sbjct: 120 TVARKASWPRWTPTPDMIRRDPARNGRWAGG----------------------------- 150

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RN 348
                    G  N + +  +      ++  Y +H T EP          +SGC+R+  ++
Sbjct: 151 ------MPGGGRNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AVSSGCIRMLNQD 201

Query: 349 IIDL 352
           +IDL
Sbjct: 202 VIDL 205


>gi|298241485|ref|ZP_06965292.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Ktedonobacter racemifer DSM 44963]
 gi|297554539|gb|EFH88403.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Ktedonobacter racemifer DSM 44963]
          Length = 381

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 15/101 (14%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDL 124
           S  P + +E  A+  + +           W +     L  G    +V+ L+  L   G  
Sbjct: 222 SKFPQLRREVAAKLGQGMP-------ERTWVD-----LRWGVRGDTVRALQYVLRAQG-- 267

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +S  +D      V  FQ   G+ P G   + T EA+
Sbjct: 268 -SDIMISGTYDDPTYKLVTAFQSAKGIAPDGYTRNDTWEAL 307



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 76  AQTEKAIAFYQDILSRG-----GWPELPIRPLHLGNSSVS--VQRLRERLIISGDLDPSK 128
            +   A    + I   G      W  L    + L N S    V  ++  L  +G      
Sbjct: 281 YKLVTAFQSAKGIAPDGYTRNDTWEALV-GAIRLDNQSQGDYVNAVQVILKRNGY---DV 336

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            ++  +D     AVK  Q  H   P+G VD +   A+   V  R
Sbjct: 337 TVNGQYDHATMKAVKQVQSLHLFPPTGKVDLNAWCAIIGGVLSR 380


>gi|239832024|ref|ZP_04680353.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239824291|gb|EEQ95859.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 282

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           S  ++  +A+ +Q  ++     I+   E  + +   E ++ +      F    D G  N 
Sbjct: 163 STARRYGIAVGKQGLEFKGTGTINAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 222

Query: 308 MASTKIEF--YSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           + S  +     +++    +H T +P    +     ++GC R+   +++DL  
Sbjct: 223 LGSRALYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYE 271


>gi|189220475|ref|YP_001941115.1| erfK/srfK family protein [Methylacidiphilum infernorum V4]
 gi|189187333|gb|ACD84518.1| Uncharacterized erfK/srfK family protein [Methylacidiphilum
           infernorum V4]
          Length = 303

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 18/72 (25%)

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYHIEEVVKTR 375
               ++H T +  L        + GC+R++N  +++L   + + TP + +          
Sbjct: 102 NRGIFIHGTNQEGLVGQP---VSYGCIRMKNRDVLELYDLVSEYTPVYIQKE-------- 150

Query: 376 KTTPVKLATEVP 387
                 L   +P
Sbjct: 151 -----PLKKPIP 157


>gi|148257802|ref|YP_001242387.1| hypothetical protein BBta_6577 [Bradyrhizobium sp. BTAi1]
 gi|146409975|gb|ABQ38481.1| hypothetical protein BBta_6577 [Bradyrhizobium sp. BTAi1]
          Length = 404

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S+  +  L+ +L   G           F      A+  FQ   GL  SG +D++T EA+ 
Sbjct: 213 SADEITDLQRKLRRLGYASVGNP-DGKFGTKTVGALAQFQAHEGLPVSGRLDAATREALK 271

Query: 167 V 167
            
Sbjct: 272 T 272


>gi|126664625|ref|ZP_01735609.1| Membrane-bound lytic murein transglycosylase B [Marinobacter sp.
           ELB17]
 gi|126630951|gb|EBA01565.1| Membrane-bound lytic murein transglycosylase B [Marinobacter sp.
           ELB17]
          Length = 418

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 9/87 (10%)

Query: 87  DILSRGG---WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            I   GG    P +    L    S  ++ +L+++L   G    +            +A++
Sbjct: 337 RIAGAGGLQNPPPVDAPAL----SRDNIMQLQQQLEQRGY--SAGSPDGIMGPATRAAIR 390

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            +Q+ +GL   G      L  + V   
Sbjct: 391 QYQIANGLVADGYPGPQVLHVLQVTPA 417


>gi|159046036|ref|YP_001534830.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157913796|gb|ABV95229.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 200

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 55/195 (28%), Gaps = 48/195 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-YVLVNIPAASLEAV-ENGKVGLRSTVIV 221
            +   V   +R+   +   +             VLV+I + +L    E+          V
Sbjct: 38  ELEQDVTQTVRRNVSSFRALDWRPYFSNTRNGAVLVDISSRALHFWSEDQTEYKLYPTSV 97

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              +  T    + I + +  P W    ++         +++P++                
Sbjct: 98  PLTEDLTRTGRTSITKKVEGPSWRPTPAMR--------QRNPEW---------------- 133

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFET 340
                               PG  N M +  +        Y +H T +        R  +
Sbjct: 134 ---------------PEFIPPGPDNPMGTHAMHLT--WTYYRIHGTHDTRKIG---RRSS 173

Query: 341 SGCVRVRNIIDLDVW 355
           +GC+ + N  D+   
Sbjct: 174 NGCIGLFN-EDIAEL 187


>gi|148655791|ref|YP_001275996.1| peptidoglycan binding domain-containing protein [Roseiflexus sp.
           RS-1]
 gi|148567901|gb|ABQ90046.1| Peptidoglycan-binding domain 1 protein [Roseiflexus sp. RS-1]
          Length = 974

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    V   ++ L   G   P   +   F      A   FQ   GL P G++   T  A
Sbjct: 574 GSQGQDVADAQQLLNQHG-AAPPLVVDGIFGPKTRQATIEFQKSRGLAPDGIIGPLTWGA 632

Query: 165 MNVPV 169
           +    
Sbjct: 633 LESGA 637


>gi|314933610|ref|ZP_07840975.1| carboxyl- protease [Staphylococcus caprae C87]
 gi|313653760|gb|EFS17517.1| carboxyl- protease [Staphylococcus caprae C87]
          Length = 492

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +  HLG+ + +V+ ++  L   G        S  FD+ +ES +K FQ  + L+ +G  D 
Sbjct: 406 KTYHLGDENKNVKTMKIGLTALGY--KVNNESNQFDSELESTIKSFQKDNHLEVTGKFDK 463

Query: 160 ST 161
            T
Sbjct: 464 KT 465


>gi|260427569|ref|ZP_05781548.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
 gi|260422061|gb|EEX15312.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
          Length = 244

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 20/114 (17%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP------------GKINAMASTK 312
           YL           G+     + DW    P   + ++DP            G  N + +  
Sbjct: 103 YLIAVGAQGYGFAGEATIPFQRDWPYWTPTANMIKRDPETYGPVRNGLPGGLENPLGARA 162

Query: 313 IEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +      R+  Y +H TP P    +     +SGC+R+  ++ I L   +   T 
Sbjct: 163 LYLYKNGRDTLYRIHGTPSPWTVGH---ATSSGCIRMFNQDSIHLAAEVPNGTK 213


>gi|254462358|ref|ZP_05075774.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium HTCC2083]
 gi|206678947|gb|EDZ43434.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacteraceae bacterium HTCC2083]
          Length = 148

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 302 PGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N + +  +  F +  +TY  +H T +P          ++GC+R+ N
Sbjct: 83  GGPRNPLGARALYLFQNGRDTYFRIHGTTQPSSIGQS---VSNGCIRMIN 129


>gi|240142794|ref|YP_002967307.1| hypothetical protein MexAM1_META2p1214 [Methylobacterium extorquens
           AM1]
 gi|240012741|gb|ACS43966.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 248

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFE 339
            + +  +      +      G  N +    +      R+  Y +H T EP          
Sbjct: 141 PDMIARDPERNGPWRNGMAGGPGNPLGPRALYLFDGGRDTLYRIHGTTEPGTIGTN---V 197

Query: 340 TSGCVRV--RNIIDLDVWLLKDT 360
           +SGC+R+  ++IIDL   +  DT
Sbjct: 198 SSGCIRMFNQDIIDLYGRVPADT 220


>gi|254460802|ref|ZP_05074218.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677391|gb|EDZ41878.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 195

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 56/188 (29%), Gaps = 47/188 (25%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIV 221
            +   +   +R+   +   +        +    VLV+I + +L    E+G         V
Sbjct: 33  ELEKDISQAVRRNISSFRTLDWRPYFSNLNNGAVLVDISSRALHFWSEDGNTYKLYPSSV 92

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
                 T    +++ R +  P W    S+         +++P++                
Sbjct: 93  PLTPDLTKKGRTKVVRKVEGPTWRPTPSMK--------KRNPEW---------------- 128

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFET 340
                              +PG  N + +  +        Y +H T +        R  +
Sbjct: 129 ---------------PDVVEPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RRSS 168

Query: 341 SGCVRVRN 348
           +GC+ + N
Sbjct: 169 NGCIGLYN 176


>gi|108759124|ref|YP_629455.1| hypothetical protein MXAN_1196 [Myxococcus xanthus DK 1622]
 gi|108463004|gb|ABF88189.1| hypothetical protein MXAN_1196 [Myxococcus xanthus DK 1622]
          Length = 205

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L +  L   ++      LR RL+  G L             +  AV  FQ  +GL P+G
Sbjct: 137 TLSLGTLQPVSTEEG---LRARLVNLGFLADEASEED----ALSEAVARFQAEYGLMPNG 189

Query: 156 MVDSSTLEAMN 166
            VD  T   + 
Sbjct: 190 TVDERTRHKLR 200


>gi|209546477|ref|YP_002278395.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537721|gb|ACI57655.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 190

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 6/66 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G +N + +  I  Y         +H T E         F +SGC R+
Sbjct: 113 KARAAGLPDLVPAGPLNPLGARGIYLYKGGADTLYRIHGTNEQSTVG---GFASSGCFRM 169

Query: 347 RNIIDL 352
            N   +
Sbjct: 170 SNADVI 175


>gi|114775654|ref|ZP_01451222.1| hypothetical protein SPV1_04978 [Mariprofundus ferrooxydans PV-1]
 gi|114553765|gb|EAU56146.1| hypothetical protein SPV1_04978 [Mariprofundus ferrooxydans PV-1]
          Length = 533

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 15/121 (12%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-----PSGMVDSSTLE 163
             ++ +R RL + G L+   G +      + SA+  FQ    L        G V   T  
Sbjct: 70  SRLRTIRNRLFLLGYLERDSGRAAL-GPQLMSAITAFQQDARLSVASFVVDGWVGEQTWA 128

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A+       +   +  L   +       G       + A  L     G      +VI  R
Sbjct: 129 ALQE-----LVSFEQPLDMERWFA----GDVACPALVRAVGLRLFALGLARDHLSVISER 179

Query: 224 V 224
            
Sbjct: 180 A 180


>gi|302532771|ref|ZP_07285113.1| predicted protein [Streptomyces sp. C]
 gi|302441666|gb|EFL13482.1| predicted protein [Streptomyces sp. C]
          Length = 231

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L+  L +   LD +  +   + A  E+AV+  Q  +GL+  G+   +T   
Sbjct: 155 GSSGEHVSELQRALAVCHGLD-TGTIDGVYGAKTEAAVRTLQSWNGLNADGIYGPNTRNV 213

Query: 165 MN 166
           ++
Sbjct: 214 VS 215


>gi|302532773|ref|ZP_07285115.1| predicted protein [Streptomyces sp. C]
 gi|302441668|gb|EFL13484.1| predicted protein [Streptomyces sp. C]
          Length = 141

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 89  LSRGG-WPELPIRP-------LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           +SRGG W  +P          +  G+S  +V  L+  L I      + G    + A  E+
Sbjct: 43  VSRGGYWTAVPATSGGSTSCVMGRGSSGPAVGELQLALAIC-YGMDTGGSDSIYGAKTEA 101

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMN 166
           AV+  Q   G    G+   +T   + 
Sbjct: 102 AVRSLQSATGQTADGIYGPNTRNVVE 127


>gi|297804516|ref|XP_002870142.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315978|gb|EFH46401.1| hypothetical protein ARALYDRAFT_493212 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 362

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 61  QIGSHVNGVSELKRYLHRFGYVNDGSESFSDVFDGPLESAISLYQENLGLPITGRLDTST 120

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 121 VSLMSLP 127


>gi|306845179|ref|ZP_07477755.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
 gi|306274338|gb|EFM56145.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. BO1]
          Length = 238

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 74  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 217 FLNQDIIDLYDRVPAKTP 234


>gi|307329028|ref|ZP_07608196.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
 gi|306885390|gb|EFN16408.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
          Length = 387

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 9/146 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +   V  L+  L  +G       +  AF    +  V +FQ+R GL  +G VD  T  A
Sbjct: 211 GQADACVHELQSLLARAG---GELDIDGAFGPATQMRVVVFQLRSGLTANGSVDERTKRA 267

Query: 165 MNVPVDLRIR--QLQVNLMRIKKLLEQKMGLRYVLVNIPAAS--LEAVENGKVGLRSTVI 220
           +       +     +    RI+++  +       + +  +    L  + N        V 
Sbjct: 268 LYENEGKPLDTWTPERVTRRIREVFTEDPERAVGIADCASYLDPLYTLPNSNATRNWGVF 327

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVI 246
                    +  +R   +  +P W I
Sbjct: 328 QLYDGTLRKLGGTREQAL--DPDWNI 351


>gi|256159287|ref|ZP_05457082.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|256254597|ref|ZP_05460133.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|261221771|ref|ZP_05936052.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|265997735|ref|ZP_06110292.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
 gi|260920355|gb|EEX87008.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti B1/94]
 gi|262552203|gb|EEZ08193.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M490/95/1]
          Length = 238

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 74  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 217 FLNQDIIDLYDRVPAKTP 234


>gi|242088519|ref|XP_002440092.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
 gi|241945377|gb|EES18522.1| hypothetical protein SORBIDRAFT_09g025870 [Sorghum bicolor]
          Length = 380

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +  L+  L   G +   +        FD ++E+AV+ +Q    L  +G +DS
Sbjct: 57  RRGSRVAGLADLKRYLARFGYMQAPRPAHEHDDVFDDHMEAAVRRYQSSLSLPVTGRLDS 116

Query: 160 STL 162
           STL
Sbjct: 117 STL 119


>gi|254476390|ref|ZP_05089776.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. R11]
 gi|214030633|gb|EEB71468.1| ErfK/YbiS/YcfS/YnhG [Ruegeria sp. R11]
          Length = 195

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 55/183 (30%), Gaps = 48/183 (26%)

Query: 179 NLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRIN 236
           +  +         +G+  +L +I + +L     +G+        V   +  T   +S I 
Sbjct: 47  SFQQQDWRDHFDELGVGCILADISSRALHYWGGDGETYRLFPSSVPMSEELTRRGYSEIV 106

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           R   NP W    S+ ++D                                       P+ 
Sbjct: 107 RKRENPSWTPTASMRERD---------------------------------------PSL 127

Query: 297 IFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
             R + G   N + +  +         +H T +        R  +SGC+ + N  + +L 
Sbjct: 128 PTRIEGGVPGNPLGTRAMYLTWP-AYLVHGTHDTRKIG---RQSSSGCIGLYNEHVEELY 183

Query: 354 VWL 356
             +
Sbjct: 184 DLV 186


>gi|23501453|ref|NP_697580.1| hypothetical protein BR0564 [Brucella suis 1330]
 gi|62289532|ref|YP_221325.1| hypothetical protein BruAb1_0586 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699461|ref|YP_414035.1| hypothetical protein BAB1_0589 [Brucella melitensis biovar Abortus
           2308]
 gi|161618538|ref|YP_001592425.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163842841|ref|YP_001627245.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189023789|ref|YP_001934557.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus S19]
 gi|225852094|ref|YP_002732327.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|254688850|ref|ZP_05152104.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|254693332|ref|ZP_05155160.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254701360|ref|ZP_05163188.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|254703905|ref|ZP_05165733.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|254709699|ref|ZP_05171510.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|254718716|ref|ZP_05180527.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|254729882|ref|ZP_05188460.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|256031190|ref|ZP_05444804.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256044274|ref|ZP_05447178.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256060697|ref|ZP_05450861.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|256113107|ref|ZP_05453984.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|256257098|ref|ZP_05462634.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|256264396|ref|ZP_05466928.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369005|ref|YP_003106511.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260168325|ref|ZP_05755136.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. F5/99]
 gi|260545712|ref|ZP_05821453.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260563627|ref|ZP_05834113.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260566847|ref|ZP_05837317.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260754333|ref|ZP_05866681.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260757552|ref|ZP_05869900.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260761377|ref|ZP_05873720.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883358|ref|ZP_05894972.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261213579|ref|ZP_05927860.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261315214|ref|ZP_05954411.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317229|ref|ZP_05956426.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261324687|ref|ZP_05963884.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261751897|ref|ZP_05995606.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261754555|ref|ZP_05998264.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|261757785|ref|ZP_06001494.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. F5/99]
 gi|265983691|ref|ZP_06096426.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|265988268|ref|ZP_06100825.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265990684|ref|ZP_06103241.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994516|ref|ZP_06107073.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|297247945|ref|ZP_06931663.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
 gi|306838693|ref|ZP_07471528.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|23347356|gb|AAN29495.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62195664|gb|AAX73964.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615562|emb|CAJ10545.1| ErfK/YbiS/YcfS/YnhG:Twin-arginine translocation pathway signal
           [Brucella melitensis biovar Abortus 2308]
 gi|161335349|gb|ABX61654.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|163673564|gb|ABY37675.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis ATCC 23445]
 gi|189019361|gb|ACD72083.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus S19]
 gi|225640459|gb|ACO00373.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|255999163|gb|ACU47562.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella microti CCM 4915]
 gi|260097119|gb|EEW80994.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus NCTC 8038]
 gi|260153643|gb|EEW88735.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260156365|gb|EEW91445.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 4 str. 40]
 gi|260667870|gb|EEX54810.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260671809|gb|EEX58630.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674441|gb|EEX61262.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 6 str.
           870]
 gi|260872886|gb|EEX79955.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260915186|gb|EEX82047.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261296452|gb|EEX99948.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis B2/94]
 gi|261300667|gb|EEY04164.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella neotomae 5K33]
 gi|261304240|gb|EEY07737.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261737769|gb|EEY25765.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. F5/99]
 gi|261741650|gb|EEY29576.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 5 str. 513]
 gi|261744308|gb|EEY32234.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella suis bv. 3 str. 686]
 gi|262765629|gb|EEZ11418.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001468|gb|EEZ14043.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094691|gb|EEZ18470.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|264660465|gb|EEZ30726.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella pinnipedialis
           M292/94/1]
 gi|264662283|gb|EEZ32544.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. 83/13]
 gi|297175114|gb|EFH34461.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 5 str.
           B3196]
 gi|306406180|gb|EFM62424.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|326408588|gb|ADZ65653.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M28]
 gi|326538308|gb|ADZ86523.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis M5-90]
          Length = 238

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 74  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 217 FLNQDIIDLYDRVPAKTP 234


>gi|154247143|ref|YP_001418101.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154161228|gb|ABS68444.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 197

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 14/153 (9%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI--PRSIIQKDMMALLRQDP 263
           +     K+   + V  G V   +PI    ++         I    S  +   +    +  
Sbjct: 29  DIFNFNKLFSGANVNDGYVGTSSPIGRQMVSIDPKYAPGTIVIRTSERRLYYVTSRGEAL 88

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP--------GKINAMASTKIEF 315
           +Y            G +    + +W    PP  + R+ P        G  N + +  +  
Sbjct: 89  RYGVGVGREGFQWSGVKTVSAKKEWPGWTPPAQMLRRRPDLPRYMPGGIENPLGARAMYL 148

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            S     +H + EP          +SGC R+ N
Sbjct: 149 GSS-LYRIHGSNEPETIGQ---AVSSGCFRMTN 177


>gi|330721409|gb|EGG99471.1| Conserved domain protein [gamma proteobacterium IMCC2047]
          Length = 168

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 8/54 (14%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
            N +         R   Y+H TP+  L       ++ GC+R+RN    +L   +
Sbjct: 111 KNRLGDVD---SMRRFIYIHGTPDTELMGI---AKSHGCIRMRNAELVELFDHV 158


>gi|312871420|ref|ZP_07731515.1| peptidase, S41 family [Lactobacillus iners LEAF 3008A-a]
 gi|312872352|ref|ZP_07732422.1| peptidase, S41 family [Lactobacillus iners LEAF 2062A-h1]
 gi|311092175|gb|EFQ50549.1| peptidase, S41 family [Lactobacillus iners LEAF 2062A-h1]
 gi|311093073|gb|EFQ51422.1| peptidase, S41 family [Lactobacillus iners LEAF 3008A-a]
          Length = 460

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L      + +  L++ L+  G L  +      +D    ++VK+F+  + L  +G+V+   
Sbjct: 376 LKYNMMGLDIAILQKYLMALGYLSNNLT--GVYDNATLNSVKMFEKDNNLKVTGIVNKDI 433

Query: 162 LEAMNVPV 169
             A+ V  
Sbjct: 434 RYALYVAA 441


>gi|225452582|ref|XP_002275556.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 315

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L  S            FD  VESA+K +Q  + L+ +G +D
Sbjct: 52  GDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYHLNATGSLD 111

Query: 159 SSTLEAMNVP 168
           S T+  M  P
Sbjct: 112 SETVSQMVKP 121


>gi|23502014|ref|NP_698141.1| hypothetical protein BR1136 [Brucella suis 1330]
 gi|82699976|ref|YP_414550.1| hypothetical protein BAB1_1159 [Brucella melitensis biovar Abortus
           2308]
 gi|256369562|ref|YP_003107072.1| hypothetical protein BMI_I1148 [Brucella microti CCM 4915]
 gi|297248449|ref|ZP_06932167.1| carnitine operon oxidoreductase CaiA [Brucella abortus bv. 5 str.
           B3196]
 gi|23347966|gb|AAN30056.1| conserved hypothetical protein [Brucella suis 1330]
 gi|82616077|emb|CAJ11115.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis biovar Abortus 2308]
 gi|255999724|gb|ACU48123.1| hypothetical protein BMI_I1148 [Brucella microti CCM 4915]
 gi|297175618|gb|EFH34965.1| carnitine operon oxidoreductase CaiA [Brucella abortus bv. 5 str.
           B3196]
          Length = 237

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           +  ++  +A+ +Q  ++     I    E  + +   E ++ +      F    D G  N 
Sbjct: 118 TTARRYGIAVGKQGLEFQGKATISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 177

Query: 308 MASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           + S  +  +  N      +H T +P    +     ++GC R+   +++DL   +   T 
Sbjct: 178 LGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYDRVTLGTE 233


>gi|47564866|ref|ZP_00235910.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
 gi|47558239|gb|EAL16563.1| putative peptidoglycan binding domain protein [Bacillus cereus
           G9241]
          Length = 592

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 16/141 (11%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPI---ISKETIAQTEKAIAFYQDIL---SRGGWPELPI 99
             +    +N          S +P     S+        AI + Q +    + G +     
Sbjct: 151 RSIQQWLNNKYINRADF--SYMPCDGHYSRSVQEALMFAIQYEQGLQDGTANGIFGPTTQ 208

Query: 100 RP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
                  L  G++   V   +  LI +G           + A V + +K FQ    L  +
Sbjct: 209 EKIKSIILKEGSTGPFVYLFQAALIFNGY---DVPFDGKYSAAVTTQLKQFQNFSLLKAT 265

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G+ D  T  ++ V      RQ
Sbjct: 266 GISDFQTWASLLVSTGDTERQ 286



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 43/153 (28%), Gaps = 26/153 (16%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSSTLEAMNV-- 167
           V+ ++  L   G      G++  +    ++A+   Q   G     G+V     +A+    
Sbjct: 81  VKIIQAALYCKGY--GPGGITGTYGPGTQAAITSMQKNLGSTSADGVVTPKLFKALLTMD 138

Query: 168 ------PVDLRIRQLQ-------VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
                     +IR +Q       +N      +     G     V          E G   
Sbjct: 139 AYVLVNNGSEKIRSIQQWLNNKYINRADFSYMPCD--GHYSRSVQEALMFAIQYEQGLQD 196

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +  I G      P    +I  I+       P
Sbjct: 197 GTANGIFG------PTTQEKIKSIILKEGSTGP 223


>gi|328954812|ref|YP_004372145.1| Peptidoglycan-binding domain 1 protein [Coriobacterium glomerans
           PW2]
 gi|328455136|gb|AEB06330.1| Peptidoglycan-binding domain 1 protein [Coriobacterium glomerans
           PW2]
          Length = 301

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 12/84 (14%)

Query: 94  WPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           W +L      LG+              V+ L+  L   G           F  + E+A++
Sbjct: 65  WSKLVDASYRLGDRTLYLRLPNFHGADVRELQTALNTLGF--SCGSADSHFGPHTEAALQ 122

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            FQ   GL   GM    T   ++ 
Sbjct: 123 QFQENVGLFADGMAFQDTFSYIDR 146



 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            P+  G    +V+ ++ RL++ G  +D ++     F +    AV+ F+    L     VD
Sbjct: 2   EPITAGMQGPAVEDVQTRLVLLGHAIDATELDDQRFGSSTARAVRSFRQSKALPDGEQVD 61

Query: 159 SSTLEAM 165
            +    +
Sbjct: 62  MACWSKL 68


>gi|218678250|ref|ZP_03526147.1| hypothetical protein RetlC8_04992 [Rhizobium etli CIAT 894]
          Length = 205

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 45/198 (22%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T +A      + I +++    R     +       ++VN     L  +      +R  + 
Sbjct: 30  TKDAGYSLPAIPIDRVKPQFRRQVVSYQTTERPGTIIVNTRERFLYYILANGKAMRYGIG 89

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           VG+         + +      P W  P+ + ++     + +          ++ D  G  
Sbjct: 90  VGKQGFA-WAGTAYVAWKQEWPTWHPPKEMAERR--PDVAK----------YVEDGMG-- 134

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFNNVV 336
                                PG  N + +  +  ++ +       +H TPE        
Sbjct: 135 ---------------------PGLTNPLGARAMYLFNEDGKDTLFRLHGTPEWASIGT-- 171

Query: 337 RFETSGCVRV--RNIIDL 352
              +SGC+R+  +++IDL
Sbjct: 172 -AASSGCIRLMNQDVIDL 188


>gi|62290049|ref|YP_221842.1| hypothetical protein BruAb1_1142 [Brucella abortus bv. 1 str.
           9-941]
 gi|161619088|ref|YP_001592975.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|189024289|ref|YP_001935057.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|225852635|ref|YP_002732868.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|254693845|ref|ZP_05155673.1| hypothetical protein Babob3T_04142 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697494|ref|ZP_05159322.1| hypothetical protein Babob28_07261 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254719198|ref|ZP_05181009.1| hypothetical protein Bru83_06595 [Brucella sp. 83/13]
 gi|254730391|ref|ZP_05188969.1| hypothetical protein Babob42_04167 [Brucella abortus bv. 4 str.
           292]
 gi|256113698|ref|ZP_05454502.1| hypothetical protein Bmelb3E_13053 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256159865|ref|ZP_05457594.1| hypothetical protein BcetM4_12819 [Brucella ceti M490/95/1]
 gi|256257607|ref|ZP_05463143.1| hypothetical protein Babob9C_09724 [Brucella abortus bv. 9 str.
           C68]
 gi|306838191|ref|ZP_07471047.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|62196181|gb|AAX74481.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|161335899|gb|ABX62204.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella canis ATCC 23365]
 gi|189019861|gb|ACD72583.1| ErfK/YbiS/YcfS/YnhG [Brucella abortus S19]
 gi|225641000|gb|ACO00914.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella melitensis ATCC 23457]
 gi|306406781|gb|EFM63004.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella sp. NF 2653]
 gi|326409154|gb|ADZ66219.1| ErfK/YbiS/YcfS/YnhG [Brucella melitensis M28]
          Length = 230

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           +  ++  +A+ +Q  ++     I    E  + +   E ++ +      F    D G  N 
Sbjct: 111 TTARRYGIAVGKQGLEFQGKATISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 170

Query: 308 MASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           + S  +  +  N      +H T +P    +     ++GC R+   +++DL   +   T 
Sbjct: 171 LGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYDRVTLGTE 226


>gi|172057401|ref|YP_001813861.1| peptidoglycan binding domain-containing protein [Exiguobacterium
           sibiricum 255-15]
 gi|171989922|gb|ACB60844.1| Peptidoglycan-binding domain 1 protein [Exiguobacterium sibiricum
           255-15]
          Length = 220

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 38/128 (29%)

Query: 64  DSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP--------------IRPLHLGNSSV 109
            ++ P      + +   A+  YQ +   G W   P               +PL LG    
Sbjct: 96  RAEFPAPPDPRLKRIVAAMKRYQ-MQWGGDWGSFPDYPHFQLYDAVNGQTKPL-LGPRYP 153

Query: 110 S--------------VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          ++ +++RL +         L+  FD  +   +K FQ +H L   G
Sbjct: 154 GQPLYAGAERMDRTLIRLIQKRLRL--------PLTGRFDQKLTQRIKQFQRQHRLAVDG 205

Query: 156 MVDSSTLE 163
           ++   T  
Sbjct: 206 IIGPVTWR 213


>gi|238926502|ref|ZP_04658262.1| 3D domain protein [Selenomonas flueggei ATCC 43531]
 gi|238885696|gb|EEQ49334.1| 3D domain protein [Selenomonas flueggei ATCC 43531]
          Length = 269

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI SG L  +             A++  Q  H L   G+   +T 
Sbjct: 92  KEGMRGGAVRHVQELLIQSGYLAGAA--DGIAGPLTREAIERCQADHQLVVDGICGEATY 149

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             ++   D       + ++  +     + G R V V+  A S  
Sbjct: 150 HVLSGGAD--YDPAALGIVDERAPQVSRGGGRSVYVSATAYSAY 191


>gi|291523484|emb|CBK81777.1| Putative peptidoglycan binding domain [Coprococcus catus GD/7]
          Length = 422

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD-LDPSKGL--SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   VQ+++E+L    D       +     +      AV+ FQ    L  +
Sbjct: 338 PGYDLTIGSSGQKVQQMQEQLNRISDNYPAIPKIAADGIYGNQTAEAVRTFQKIFNLPQT 397

Query: 155 GMVDSSTLEAMNV 167
           G+ D +T   ++ 
Sbjct: 398 GVTDYATWYKISQ 410


>gi|307153693|ref|YP_003889077.1| peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
 gi|306983921|gb|ADN15802.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7822]
          Length = 479

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDP-----SKGLSVAFDAYVESAVKLFQMRHGLDP-SG 155
           L  G++  +V+++++ LI      P     +      + A     VK FQ    L    G
Sbjct: 109 LRNGSTGEAVKKIQQALIDLKYPMPISTQKTGEPDGIYGAETSKTVKQFQTDQALKDKDG 168

Query: 156 MVDSSTLEAMNV 167
           +V   T+E ++ 
Sbjct: 169 IVGKDTIEKLDQ 180


>gi|227819315|ref|YP_002823286.1| hypothetical protein NGR_b10800 [Sinorhizobium fredii NGR234]
 gi|227338314|gb|ACP22533.1| hypothetical protein NGR_b10800 [Sinorhizobium fredii NGR234]
          Length = 203

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 6/66 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
               P        G  N M +  I  Y  +      +H T E         F +SGC R+
Sbjct: 126 KTRVPGLPELVPAGPFNPMGARGIYLYRGSADTLYRIHGTNEQSTVGE---FASSGCFRM 182

Query: 347 RNIIDL 352
            N   +
Sbjct: 183 SNADVI 188


>gi|254712879|ref|ZP_05174690.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|254716767|ref|ZP_05178578.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261218563|ref|ZP_05932844.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261320588|ref|ZP_05959785.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
 gi|260923652|gb|EEX90220.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M13/05/1]
 gi|261293278|gb|EEX96774.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella ceti M644/93/1]
          Length = 238

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 74  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGG-----IAPGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 217 FLNQDIIDLYDRVPAKTP 234


>gi|240142632|ref|YP_002967145.1| hypothetical protein MexAM1_META2p1012 [Methylobacterium extorquens
           AM1]
 gi|240012579|gb|ACS43804.1| Conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 283

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 45/193 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             V           N+ ++     ++     ++V+     L  V  G   +R  V VG+ 
Sbjct: 54  FPVEAVDPRDLKARNVRQLVDYPSKEPPGT-LVVDPYKRFLYLVMEGGKAMRYAVGVGKA 112

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
             +     + + R    P W     ++++D     R                        
Sbjct: 113 GFE-FTGKATVARKASWPRWTPTPDMLRRDPERNGRWAGG-------------------- 151

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETS 341
                             G+ N + +  +      ++  Y +H T EP          +S
Sbjct: 152 ---------------MPGGERNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AVSS 193

Query: 342 GCVRV--RNIIDL 352
           GC+R+  +++IDL
Sbjct: 194 GCIRMLNQDVIDL 206


>gi|254476208|ref|ZP_05089594.1| twin-arginine translocation pathway signal [Ruegeria sp. R11]
 gi|214030451|gb|EEB71286.1| twin-arginine translocation pathway signal [Ruegeria sp. R11]
          Length = 209

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 52/182 (28%), Gaps = 46/182 (25%)

Query: 183 IKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            K       +    +LV+I + +L    E+G         V   D  T    ++I R + 
Sbjct: 66  KKWQPYFDNLRKGAILVDIDSRALHYWSEDGNDYRLFPSSVPLSDDLTRRGRTQIIRKVD 125

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++        L+++P++                                   
Sbjct: 126 GPGWAPTPNM--------LKRNPEW-------------------------------PAYI 146

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
            PG  N + +  +    +    +H T +        R  ++GC+ + N   +        
Sbjct: 147 PPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RKSSNGCIGLYN-EHIAELFALTK 201

Query: 361 PT 362
             
Sbjct: 202 VG 203


>gi|226499088|ref|NP_001151749.1| metalloendoproteinase 1 [Zea mays]
 gi|195649493|gb|ACG44214.1| metalloendoproteinase 1 precursor [Zea mays]
          Length = 365

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     +  L++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D ST
Sbjct: 52  GEERQGLAGLKDYLSHFGYLPPPPPSSPFSDAFDQNLEAAIATYQRNFGLNATGALDPST 111

Query: 162 LEAMNVP 168
           +  M  P
Sbjct: 112 VSQMVAP 118


>gi|311067778|ref|YP_003972701.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           atrophaeus 1942]
 gi|310868295|gb|ADP31770.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           atrophaeus 1942]
          Length = 297

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 96  ELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMR 148
            LP   L       S   V +++  L            + G+   +     +AV  FQ  
Sbjct: 216 PLPDGILQLTTPYTSGEKVYQVQNALAALYFYPDKGAVNNGIDGIYGPKTANAVSRFQSV 275

Query: 149 HGLDPSGMVDSSTLEAMNV 167
           +GL   G+   +T   +  
Sbjct: 276 NGLTVDGIYGPATKAKIAA 294


>gi|147807819|emb|CAN73128.1| hypothetical protein VITISV_030256 [Vitis vinifera]
          Length = 305

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKG------LSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L  S            FD  VESA+K +Q  + L+ +G +D
Sbjct: 52  GDKVEGIHKLKKYLGQFGYLSYSHSKYHTHANDDDFDDLVESAIKTYQTNYHLNATGSLD 111

Query: 159 SSTLEAMNVP 168
           S T+  M  P
Sbjct: 112 SETVSQMVKP 121


>gi|86361200|ref|YP_473087.1| hypothetical protein RHE_PF00470 [Rhizobium etli CFN 42]
 gi|86285302|gb|ABC94360.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 224

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 40/153 (26%), Gaps = 47/153 (30%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 81  LYLIMENKTAIRYGVGVGREGFK-WFGRATIDAKSLWPRWTPPPEMRKRH---------- 129

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 130 ----------------------------PELPEFVSGGSPKNPLGPRAMYLHRDGVDTGY 161

Query: 322 YMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
             H T EP          +SGC+R+   + IDL
Sbjct: 162 RFHGTLEPWSIGKD---ASSGCIRMFNEDAIDL 191


>gi|171915584|ref|ZP_02931054.1| hypothetical protein VspiD_30475 [Verrucomicrobium spinosum DSM
           4136]
          Length = 129

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
            Y+H T +  L        + GCVR+RN  +++L   +   TP +
Sbjct: 85  VYIHGTNQEELIGQRG---SHGCVRMRNLDVVELYDLVEPGTPVY 126


>gi|115524111|ref|YP_781022.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris BisA53]
 gi|115518058|gb|ABJ06042.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris BisA53]
          Length = 294

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    + LG+   +V  L+  L   G        S  ++A     V  FQ 
Sbjct: 195 GHWVPAAPIVRGDVMKLGSDGDAVLALQRALAEYGY---GLTPSGHYNAATAEVVTAFQR 251

Query: 148 RHG-LDPSGMVDSSTLE 163
                   G+ D+STL 
Sbjct: 252 HFRPQKVDGIADTSTLA 268


>gi|319403817|emb|CBI77401.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 229

 Score = 50.0 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 35/107 (32%), Gaps = 10/107 (9%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ--DPGKINAMASTKIE-FYS 317
           ++        I     +       +              Q   PG  N + +     F +
Sbjct: 110 KEGLAFTGVGIVQYKRRWPRWAPTKAMMEREPERYGHLGQGMPPGPENPLGARAFYLFKN 169

Query: 318 RNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
             +T   +H + E        R  +SGC+R+  ++IIDL   +   +
Sbjct: 170 GKDTLFRIHGSHEAWSIG---RAISSGCIRLLNQDIIDLYNRVPDGS 213


>gi|170738497|ref|YP_001767152.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168192771|gb|ACA14718.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 295

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFE 339
            + +  +      +      G+ N + +  +      ++  Y +H T EP          
Sbjct: 135 PDMIRRDPTRNGRWAGGMPGGERNPLGARALYLFKDGKDTLYRIHGTTEPWSIGE---AV 191

Query: 340 TSGCVRV--RNIIDL 352
           +SGC+R+  +++IDL
Sbjct: 192 SSGCIRMLNQDVIDL 206


>gi|218130611|ref|ZP_03459415.1| hypothetical protein BACEGG_02200 [Bacteroides eggerthii DSM 20697]
 gi|217986955|gb|EEC53286.1| hypothetical protein BACEGG_02200 [Bacteroides eggerthii DSM 20697]
          Length = 298

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS----VAFDAYVESAVKLFQMRHGL 151
            +  R L  G     V  L   L  +  ++ S          +DA + SAVK FQ   GL
Sbjct: 130 SIGDRTLKTGIHGSDVTSLTGYLATALYINRSWIKEKEGYSLYDATIASAVKHFQKDAGL 189

Query: 152 DPSGMVDSSTLEAMN 166
             +G+ D +T+  + 
Sbjct: 190 PQTGIADQTTINKLK 204



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPS------KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    V  L   L  +G                 F   + +AV+ FQ  + L  +G  D 
Sbjct: 228 DKGTDVTELVNLLTKAGFAPDPKKIVMTNDGRTEFTKDIATAVRFFQAYNNLSVTGRADE 287

Query: 160 STLEAMNVPVD 170
           +T++A+     
Sbjct: 288 ATIKALKTKAQ 298


>gi|126736137|ref|ZP_01751880.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
 gi|126714303|gb|EBA11171.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
          Length = 222

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
             G  N + S        +R+    +H T EP       R  +SGCVR+
Sbjct: 146 PGGPQNPLGSRAFYLFEGNRDTYLRIHGTNEPWTIG--GRA-SSGCVRM 191


>gi|222147064|ref|YP_002548021.1| hypothetical protein Avi_0061 [Agrobacterium vitis S4]
 gi|221734054|gb|ACM35017.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 232

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 64/213 (30%), Gaps = 46/213 (21%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
                  T +A      + I+++     R     +       ++VN     L  V     
Sbjct: 51  DDSYGPVT-DAGYALPGIPIQKVNPKFRRQIIAFDTTERPGTIIVNTKERFLYYVLPNGK 109

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +R  + VG+ D       + I      P W  P     K+M     +  +Y+++     
Sbjct: 110 AIRYGIGVGK-DGFAWQGQAYIAWKQEWPTWHPP-----KEMAVRKPEVAKYVENG---- 159

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEP 329
                                       P   N + +  +  ++         +H +PE 
Sbjct: 160 --------------------------MGPSISNPLGARAMYLFNDKGQDTLFRIHGSPEW 193

Query: 330 ILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                     +SGC+R+  +++IDL   +L   
Sbjct: 194 ASIGT---AASSGCIRMINQDVIDLYSRVLPGK 223


>gi|163745335|ref|ZP_02152695.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|161382153|gb|EDQ06562.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 221

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 42/170 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +  + +    + +  V V+  A  +  +E G   +R  V + R +   P     I R +
Sbjct: 60  FLPQRVVANDSLRVGDVHVDAVARYVYHIEEGGTAMRYGVAIARGNLYEP-GTYTIKRKV 118

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P+W   +++I++D                  +       V                  
Sbjct: 119 EWPHWTPTQNMIKRDP----------------ELYAGLQDGVN----------------- 145

Query: 300 QDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
             PG  N + S  +     +R+    +H TPE        R  +SGCVR+
Sbjct: 146 --PGPENPLGSRALYLFQGNRDTYLRIHGTPEARSIG--GRA-SSGCVRM 190


>gi|159184139|ref|NP_353087.2| hypothetical protein Atu0048 [Agrobacterium tumefaciens str. C58]
 gi|159139476|gb|AAK85872.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 237

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 46/205 (22%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           + +    T +A      + I ++     R     +       ++VN     L  + +G  
Sbjct: 57  NDVYGPVT-DAGYALPAIPINRVNEKYRRQIVEFQTSERPGTIIVNTRDRYLYYIMSGNR 115

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +R  + VG+         + +      P W  P     K+M     +  +Y++      
Sbjct: 116 AVRYGIGVGKAGFA-WAGEAYVAWKQEWPMWHPP-----KEMADRKPEVAKYVEAG---- 165

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEP 329
                                       PG  N + +  +  ++         +H +PE 
Sbjct: 166 --------------------------MGPGLSNPLGARAMYLFNEKGQDTLFRIHGSPEW 199

Query: 330 ILFNNVVRFETSGCVRV--RNIIDL 352
                     +SGC+R+  +++IDL
Sbjct: 200 ASIGT---AASSGCIRMINQDVIDL 221


>gi|291570491|dbj|BAI92763.1| glycoside hydrolase, family 25 [Arthrospira platensis NIES-39]
          Length = 455

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVD 158
             +  G     V+ ++ +L   G       +   F A  E AV  FQ   G+   +G+  
Sbjct: 195 ESIRKGERGPKVELMQTKLKKRGF--EPGVIDGIFGAGTERAVISFQDNKGIKEKNGVAG 252

Query: 159 SSTLEAMNVPVD 170
             T  A+   V+
Sbjct: 253 LKTWTALMGQVE 264


>gi|78184349|ref|YP_376784.1| hypothetical protein Syncc9902_0772 [Synechococcus sp. CC9902]
 gi|78168643|gb|ABB25740.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 163

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 46/159 (28%), Gaps = 52/159 (32%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + V++    L   E+GKV  +  + +G  +  T   +  I      P         
Sbjct: 34  ADMSIEVSLKHRYLTLFEDGKVIGKYPIAIGAPESPTIAGNFDIKSKDAAP--------- 84

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                                +  +KGK +                    PG  N +   
Sbjct: 85  ---------------------VYHKKGKVI-------------------APGPDNPVGVR 104

Query: 312 KIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  + R+   +H T  P   N      + GC+R+ N
Sbjct: 105 YMPYVRFGRDEYAIHGTAWPSWVNLRA-AVSLGCIRMLN 142


>gi|325836775|ref|ZP_08166242.1| peptidase, S41 family [Turicibacter sp. HGF1]
 gi|325491153|gb|EGC93442.1| peptidase, S41 family [Turicibacter sp. HGF1]
          Length = 475

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L       S+   +  L   G           +D    SAV+ FQ  + +  +G++D
Sbjct: 384 GKSLEYDMVDSSIANAQNILTALGY--QVGRHDGYYDKSTVSAVENFQADNEILVTGIID 441

Query: 159 SSTLEAMNVPVDLRIR 174
           + T   + + +  ++R
Sbjct: 442 NKTASELTLALRNKVR 457


>gi|293375596|ref|ZP_06621870.1| peptidase, S41 family [Turicibacter sanguinis PC909]
 gi|292645813|gb|EFF63849.1| peptidase, S41 family [Turicibacter sanguinis PC909]
          Length = 475

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            + L       S+   +  L   G           +D    SAV+ FQ  + +  +G++D
Sbjct: 384 GKSLEYDMVDSSIANAQNILTALGY--QVGRHDGYYDKSTVSAVENFQADNEILVTGIID 441

Query: 159 SSTLEAMNVPVDLRIR 174
           + T   + + +  ++R
Sbjct: 442 NKTASELTLALRNKVR 457


>gi|86139671|ref|ZP_01058238.1| hypothetical protein MED193_02170 [Roseobacter sp. MED193]
 gi|85823562|gb|EAQ43770.1| hypothetical protein MED193_02170 [Roseobacter sp. MED193]
          Length = 220

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 45/169 (26%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R+        G  +  V+  A  L  +E     +R  V + R +   P     I R + 
Sbjct: 63  QRVVAKPGLVPGDIH--VDAVARYLYHIEESGTAMRYGVAIARGNLYEP-GVYTIKRKVR 119

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P+W   +++I++                              E   W            
Sbjct: 120 WPHWTPTQNMIER----------------------------DPENARWADG--------M 143

Query: 301 DPGKINAMASTKIEFYSRN-NTY--MHDTPEPILFNNVVRFETSGCVRV 346
           +PG  NA+ S  I  Y  + +TY  +H TP P       R  +SGCVR+
Sbjct: 144 EPGPENALGSRAIYLYVGDRDTYLRIHGTPYPRSIG--GRA-SSGCVRM 189


>gi|147812598|emb|CAN66084.1| hypothetical protein VITISV_024635 [Vitis vinifera]
          Length = 353

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             G+    +  L++     G L      ++  FD  +ESAV  +Q + GL  +G  DS T
Sbjct: 55  RRGSRISGMAELKKYFNRFGYLGFQDGNVTDVFDTRLESAVAAYQAKLGLQVTGRFDSET 114

Query: 162 LEAMNVP 168
           L  M  P
Sbjct: 115 LSQMMSP 121


>gi|92116826|ref|YP_576555.1| negative regulator of AmpC, AmpD [Nitrobacter hamburgensis X14]
 gi|91799720|gb|ABE62095.1| negative regulator of AmpC, AmpD [Nitrobacter hamburgensis X14]
          Length = 289

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L  G+    V+ L++ L   G        S  FD      V  FQ 
Sbjct: 191 GHWVRPSPIVRGDVLKTGSEGDDVRALQQSLARYGY---GIKASGTFDTPTMEVVTAFQR 247

Query: 148 RHGLD-PSGMVDSSTLE 163
               +   G+ D STL 
Sbjct: 248 HFRPERVDGVADQSTLN 264


>gi|296446913|ref|ZP_06888849.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296255588|gb|EFH02679.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 202

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 43/150 (28%), Gaps = 46/150 (30%)

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L    N    +R  V VGR    T   H+ I R    P W  P +++++        
Sbjct: 77  NRYLYLSMNDGHAIRYGVGVGRPG-FTWRGHTHIGRKESWPNWTPPSAMLRRR------- 128

Query: 262 DPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN- 320
                                           P+       G  N + +  +  YS    
Sbjct: 129 --------------------------------PDLPRHMSGGANNPLGARAMYLYSGKRD 156

Query: 321 --TYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +H + EP          +SGC+R+ N
Sbjct: 157 TMFRIHGSNEPWTIGQG---VSSGCIRMMN 183


>gi|160916038|ref|ZP_02078246.1| hypothetical protein EUBDOL_02066 [Eubacterium dolichum DSM 3991]
 gi|158432514|gb|EDP10803.1| hypothetical protein EUBDOL_02066 [Eubacterium dolichum DSM 3991]
          Length = 169

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 101 PLHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           PL +G++ + V +++  L      G +         F A   +AV+ FQ    L  +G +
Sbjct: 7   PLTIGSTGIGVNKMQAYLNMFQERGLITTKVNQDGDFGAITANAVREFQAYSRLPINGKI 66

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
           D +T  A           +   L  ++ +    +  R   +   +  LE  +  +
Sbjct: 67  DDATWSA-----------IVNKLRELRIITNIPVASRSFFLAKGSQGLEVFKMQE 110


>gi|298694714|gb|ADI97936.1| carboxy-terminal processing proteinase [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 496

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 2/63 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +   +G+   +++ ++  L   G    ++     FD  +E+ +K FQ  + L+ +G  +
Sbjct: 409 TKTFKVGDDDKNIKTIKIGLSDLGYKVDNET--TQFDQALENQIKAFQQANKLEVTGEFN 466

Query: 159 SST 161
             T
Sbjct: 467 KET 469


>gi|224053424|ref|XP_002297812.1| predicted protein [Populus trichocarpa]
 gi|222845070|gb|EEE82617.1| predicted protein [Populus trichocarpa]
          Length = 395

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + L  G+    V+ +++ L   G     + +   +F +  E AV+ +Q   G    G++ 
Sbjct: 177 KTLRKGSEGEQVKEMQDALQKLGFYSGEEDMEYSSFSSGTERAVRTWQASLGASEDGIMT 236

Query: 159 SSTLEAM 165
           +  L+ +
Sbjct: 237 TELLKRL 243


>gi|217977409|ref|YP_002361556.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
 gi|217502785|gb|ACK50194.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocella silvestris BL2]
          Length = 196

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 48/187 (25%), Gaps = 49/187 (26%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L R      Q      +++      L  V      +R  V +G+  +      + I    
Sbjct: 49  LAREIVAFPQPYPAGMIVIKQSERKLYLVTGDGRAIRYPVAIGKSGKA-WQGEATIQGKF 107

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P W  P  + +                                       + PNF   
Sbjct: 108 MRPSWSAPADVRR---------------------------------------DHPNFPAV 128

Query: 300 QDPG-KINAMASTKIEFYSRNNTYMHDTPE--PILFNNVVRFETSGCVRV--RNIIDLDV 354
              G   N M +  +         +H T               + GC+R+   +++DL  
Sbjct: 129 IPGGSPRNPMGAAALTLSLSE-VAIHGTTASMRKSIGA---AASYGCIRMLNEDVVDLFG 184

Query: 355 WLLKDTP 361
            +   TP
Sbjct: 185 RVSVGTP 191


>gi|315282856|ref|ZP_07871174.1| carboxypeptidase family protein [Listeria marthii FSL S4-120]
 gi|313613500|gb|EFR87326.1| carboxypeptidase family protein [Listeria marthii FSL S4-120]
          Length = 357

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + +D +G++
Sbjct: 269 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVQRFQAANKIDVTGIM 326

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       ++++   L + K L++
Sbjct: 327 TGVTTDKLVELTQKHLKEIDPQLQKAKALVK 357


>gi|225452586|ref|XP_002275671.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 303

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSGMV 157
           G+    + ++++ L   G L  +   +         FD  +ESA+K FQ  + L P+G++
Sbjct: 45  GDKVEGIHKVKKYLQHFGYLGSTHSQTETQVDSEDHFDDALESAIKAFQTYYHLKPTGIL 104

Query: 158 DSSTLEAMNVP 168
           D+ T   M+  
Sbjct: 105 DAPTATQMSRT 115


>gi|226530405|ref|NP_001147545.1| peptidoglycan binding domain containing protein [Zea mays]
 gi|195612094|gb|ACG27877.1| peptidoglycan binding domain containing protein [Zea mays]
          Length = 342

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G     V+ ++E L   G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 137 RTLRTGAEGEDVRAMQEALQKLGFYSGEEDMEYSSFSSGTERAVKTWQATVGASENGVMT 196

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 197 SELLEWL 203


>gi|83952910|ref|ZP_00961639.1| hypothetical protein ISM_17625 [Roseovarius nubinhibens ISM]
 gi|83835701|gb|EAP75001.1| hypothetical protein ISM_17625 [Roseovarius nubinhibens ISM]
          Length = 200

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 54/152 (35%), Gaps = 42/152 (27%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+  A  L  +E G   +R  V + R +   P     I R +  P+W   +S+I      
Sbjct: 57  VDAVARYLYHIEEGGTAMRYGVAIARGNLYEP-GVYIIKRKVRWPHWQPTQSMIN----- 110

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
              +DP+   D    + D                         +PG  NA+ S  +  Y 
Sbjct: 111 ---RDPELYAD----IADG-----------------------MEPGPENALGSRALYLYV 140

Query: 318 RNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
            +      +H TP P       R  +SGCVR+
Sbjct: 141 GDRDTLLRIHGTPSPRSIG--GRA-SSGCVRM 169


>gi|307945526|ref|ZP_07660862.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
 gi|307771399|gb|EFO30624.1| ErfK/YbiS/YcfS/YnhG family protein [Roseibium sp. TrichSKD4]
          Length = 221

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 70/221 (31%), Gaps = 52/221 (23%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY-------VLVNIPAAS 204
             +  +D   L       + +     V+L  I  +  +++           ++V+ P   
Sbjct: 34  PNAKRIDPEYLTMYRAMPEEKFPIPAVDLKDIDPVYFRQLVDYTAPEPVGTIIVDTPNRF 93

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L     G   +R  V +GR   +     +RI      P W  P  +I++           
Sbjct: 94  LYLTMEGGKAMRYGVGIGRAGFE-WGGAARIAYKREWPTWTPPAEMIER----------- 141

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY 322
                                     PE   F     PG  N + +  +      R+  Y
Sbjct: 142 -------------------------QPELEEFRNGMAPGIENPLGARALYIFEGGRDTLY 176

Query: 323 -MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            +H T E           +SGCVR+  ++IIDL   +  +T
Sbjct: 177 RVHGTAETWSIGK---AVSSGCVRLLNQDIIDLYNRVPNNT 214


>gi|269956385|ref|YP_003326174.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305066|gb|ACZ30616.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 359

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            E+P  R L  G     V +++  L  +G L         FD    +AV+ +Q   G++ 
Sbjct: 112 GEVPAFRDLFQGAKGADVAQVQRFLAGAGFLTGEADGD--FDPATATAVRAWQKSLGVER 169

Query: 154 SGMVDSSTLEAMNVPVD 170
            G+V ++ +   +    
Sbjct: 170 DGVVRAADIVFASALPA 186


>gi|126738468|ref|ZP_01754173.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. SK209-2-6]
 gi|126720267|gb|EBA16973.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. SK209-2-6]
          Length = 206

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 45/168 (26%)

Query: 183 IKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            +       +    +LV+I + +L    E+GK        V   D  T    ++I R + 
Sbjct: 63  KRWEPYFDNLRRGAILVDIDSRALHYWSEDGKDYRLFPSSVPLSDDLTRRGRTKIIRKVE 122

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++         +++P++                                   
Sbjct: 123 GPGWAPTPNMR--------KRNPEW-------------------------------PAYI 143

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 144 PPGPDNPLGTHALYLSWKF-YRIHGTHDTRKIG---RKSSNGCIGLYN 187


>gi|315303769|ref|ZP_07874271.1| carboxy- processing protease [Listeria ivanovii FSL F6-596]
 gi|313627857|gb|EFR96488.1| carboxy- processing protease [Listeria ivanovii FSL F6-596]
          Length = 509

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 421 SSKVYQEGDFGDDVKTIETLLKALDY--NVGKVDGLYDTDTKYAVERFQTANQLDVTGIM 478

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 479 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 509


>gi|220924065|ref|YP_002499367.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219948672|gb|ACL59064.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 190

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 46/164 (28%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                K G   V+++     L  +   +  ++  V VGR    +      +      P W
Sbjct: 53  WNSPYKPGT--VVISTSQRRLYYILPNQEAIQYGVGVGRQG-FSWSGTKTVTMKKEWPAW 109

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P  ++++                                        P+       G 
Sbjct: 110 RPPGQMLKRR---------------------------------------PDLPRYMAGGM 130

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            N + +  +   S     +H + EP          +SGC+R+ N
Sbjct: 131 DNPLGARALYLGSS-LYRIHGSNEPETIGA---AVSSGCIRMTN 170


>gi|296087731|emb|CBI34987.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 7/71 (9%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVA-------FDAYVESAVKLFQMRHGLDPSGMV 157
           G+    + ++++ L   G L  +   +         FD  +ESA+K FQ  + L P+G++
Sbjct: 38  GDKVEGIHKVKKYLQHFGYLGSTHSQTETQVDSEDHFDDALESAIKAFQTYYHLKPTGIL 97

Query: 158 DSSTLEAMNVP 168
           D+ T   M+  
Sbjct: 98  DAPTATQMSRT 108


>gi|256395924|ref|YP_003117488.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256362150|gb|ACU75647.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 349

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--G 155
               L  G++  +V  L+  L   G       ++  +D     AV   Q    +     G
Sbjct: 275 SAGTLQAGDTGPNVSILQTLLDRLG-TPTWVPVTGVYDTRTTDAVAYVQNMLNITADPRG 333

Query: 156 MVDSSTLEAMNV 167
           +    T  A+N 
Sbjct: 334 VCGPDTASAINT 345


>gi|296131671|ref|YP_003638918.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola sp. JR]
 gi|296030249|gb|ADG81017.1| ErfK/YbiS/YcfS/YnhG family protein [Thermincola potens JR]
          Length = 126

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 7/112 (6%)

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
           +  N  +          +   +     YL+  N                           
Sbjct: 1   MRKNTLYNDEPLYSNILIRVDVTNRLLYLERGNRTTQIYPVAVGKPSTPTPPGTYSIIEK 60

Query: 298 FRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN 348
                G    + +  +     +    +H T             ++GC+R+ N
Sbjct: 61  TVNPGGI---LGTRWMGLDIPDGPYGIHGTWNRDSIGK---AVSNGCIRMYN 106


>gi|258624358|ref|ZP_05719307.1| VgrG protein [Vibrio mimicus VM603]
 gi|258583509|gb|EEW08309.1| VgrG protein [Vibrio mimicus VM603]
          Length = 1040

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 27/180 (15%)

Query: 28  EKPIHASVLDEIINESYHSIVN----DRFDNFLARVDMGIDSDIPIISKETIAQ-----T 78
            KP+  SV  +I                             SD P   ++   +      
Sbjct: 648 AKPVAESVQPDIAASMQSGAARVIDIAAIPTATPSSSDDTASDEPAAEEKAPERILKSDL 707

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            K     + + SR             GN+S  V+ L++ LI  G      G    F    
Sbjct: 708 LKPSDELEKLASRQ------ASAYRQGNNSEEVRLLQQALIKLGFDLGKAGADGDFGGKT 761

Query: 139 ESAVKLFQMRHG-----------LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           ++A++ FQ  +                G+V + TL A++  +       + + M +K L 
Sbjct: 762 KTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGNGTLLALDEALMDGWV-YENDEMDLKWLT 820


>gi|182677054|ref|YP_001831200.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182632937|gb|ACB93711.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 177

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/179 (11%), Positives = 46/179 (25%), Gaps = 49/179 (27%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R             +++      L  +      +R  + +G+  +      + +     
Sbjct: 31  AREIVKFSPDYPAGMIVIKQSERKLYLITGDGTAIRYPIAIGKTGKA-WKGEAFVAGKFV 89

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P                         ++                 + PNF    
Sbjct: 90  QPAWSPP------------------------EVVR---------------HDHPNFPDVI 110

Query: 301 DPG-KINAMASTKIEFYSRNNTYMHDTPE--PILFNNVVRFETSGCVRV--RNIIDLDV 354
             G   N M +  I   + +   +H T +             + GC+R+   +++DL  
Sbjct: 111 PGGAPNNPMGAAAITL-NLSEVAIHGTTDTMRKSVGT---AASYGCIRMYNEDVLDLFE 165


>gi|318060982|ref|ZP_07979703.1| hypothetical protein SSA3_23760 [Streptomyces sp. SA3_actG]
          Length = 266

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 191 VTQAVLRRGDSGPEVAKLEERLRAVGIYP--GRDDGRFDRGLEYALMTYQVTRGASDEHG 248

Query: 156 MVDSSTLEAMN 166
           +  + T   + 
Sbjct: 249 VYGADTRTKLE 259


>gi|284034110|ref|YP_003384041.1| peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
 gi|283813403|gb|ADB35242.1| Peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
          Length = 342

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 5/121 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             LP  R L  G+    V +L + L   G           +  Y   AV+ +Q   GL  
Sbjct: 98  GALPAYRRLTSGSEGPDVLQLEQNLQALGY--DGFTADDEYTLYTAEAVEQWQEDRGLAE 155

Query: 154 SG--MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +G   +      A  V V+    Q    +   + +L      + V V + AA L   + G
Sbjct: 156 TGSVELGQVLFAAGAVRVESVQAQEGAQIGPGQPVLSYSGTKKAVTVKLEAADLRLAKKG 215

Query: 212 K 212
            
Sbjct: 216 A 216


>gi|265766267|ref|ZP_06094308.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253935|gb|EEZ25400.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 264

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + + LG        L   L  +G    S   S  F   ++ AV  FQ ++ LD  G+V  
Sbjct: 2   KTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKEAVIDFQQKNKLDADGIVGY 58

Query: 160 STLEAMNVPVDLRIRQLQ 177
            T E +         +L 
Sbjct: 59  RTWEVLFFTGHPITERLT 76


>gi|53714241|ref|YP_100233.1| putative phage-related protein [Bacteroides fragilis YCH46]
 gi|60682298|ref|YP_212442.1| putative phage-related protein [Bacteroides fragilis NCTC 9343]
 gi|52217106|dbj|BAD49699.1| putative phage-related protein [Bacteroides fragilis YCH46]
 gi|60493732|emb|CAH08521.1| putative phage-related protein [Bacteroides fragilis NCTC 9343]
 gi|301163771|emb|CBW23326.1| putative phage-related protein [Bacteroides fragilis 638R]
          Length = 264

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + + LG        L   L  +G    S   S  F   ++ AV  FQ ++ LD  G+V  
Sbjct: 2   KTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKEAVIDFQQKNKLDADGIVGY 58

Query: 160 STLEAMNVPVDLRIRQLQ 177
            T E +         +L 
Sbjct: 59  RTWEVLFFTGHPITERLT 76


>gi|160915933|ref|ZP_02078141.1| hypothetical protein EUBDOL_01956 [Eubacterium dolichum DSM 3991]
 gi|158432409|gb|EDP10698.1| hypothetical protein EUBDOL_01956 [Eubacterium dolichum DSM 3991]
          Length = 232

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 90  SRGGWPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            R G P        L +G+  V V  L++ L   G    +  L  AF     +A+  FQ 
Sbjct: 141 KRQGPPACRAGYPTLRIGSRGVYVLVLQDALNALGY--NTYTLDGAFGNNTRNALISFQR 198

Query: 148 RHGLDPSGMVDSSTLEAM 165
            + L   G+   +T   +
Sbjct: 199 NNNLRADGIAGCNTWTRL 216


>gi|86136794|ref|ZP_01055372.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
 gi|85826118|gb|EAQ46315.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseobacter
           sp. MED193]
          Length = 206

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 45/171 (26%)

Query: 180 LMRIKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINR 237
               +       +    +LV+I + +L    E+G         V   D  T    + I R
Sbjct: 60  FRAKRWQPYFDHLRKGAILVDIDSRALHYWSEDGNNYRLFPSSVPLSDDLTRRGRTSITR 119

Query: 238 IMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFI 297
            +  P W    ++         +++P++                                
Sbjct: 120 KVDGPGWAPTPNMR--------KRNPEW-------------------------------P 140

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 141 AYIPPGPDNPLGTHALYLGWKY-YRIHGTHDTRKIG---RKSSNGCIGLYN 187


>gi|85707007|ref|ZP_01038096.1| hypothetical protein ROS217_03090 [Roseovarius sp. 217]
 gi|85668448|gb|EAQ23320.1| hypothetical protein ROS217_03090 [Roseovarius sp. 217]
          Length = 150

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 57/152 (37%), Gaps = 42/152 (27%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+  A  L  +E G   +R  V + R     P     I R +  P+W   +++I      
Sbjct: 7   VDAVARYLYHIEEGGTAMRYGVAIARGKLYEP-GVYTIKRKVRWPHWQPTQNMIN----- 60

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
              +DP+   D    + D                         +PG  NA+ S  +  Y 
Sbjct: 61  ---RDPELYAD----IADG-----------------------MEPGPENALGSRALYLYV 90

Query: 318 RN-NTY--MHDTPEPILFNNVVRFETSGCVRV 346
            + +TY  +H TP+P       R  +SGCVR+
Sbjct: 91  GDRDTYLRIHGTPQPRSIG--GRA-SSGCVRM 119


>gi|182679961|ref|YP_001834107.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182635844|gb|ACB96618.1| ErfK/YbiS/YcfS/YnhG family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 240

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 55/170 (32%), Gaps = 46/170 (27%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWV 245
               + G   ++++  +  L  ++   + +R  + VGR         +R+ R    P W+
Sbjct: 99  PNPTEEGPGTIVIDTKSRQLYYIQPDGMAIRYGIGVGREGFA-WKGTARVGRKAEWPRWI 157

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
            P+ ++++                                        P+     + G  
Sbjct: 158 PPKEMLKRR---------------------------------------PDLPTSMEGGVE 178

Query: 306 NAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           N + +  +      R+  + +H T EP          +SGC+R+ N   +
Sbjct: 179 NPLGARALYLYQGERDTLFRIHGTNEPDTIGK---AVSSGCIRMMNADVI 225


>gi|295706441|ref|YP_003599516.1| spore cortex-lytic enzyme [Bacillus megaterium DSM 319]
 gi|294804100|gb|ADF41166.1| spore cortex-lytic enzyme [Bacillus megaterium DSM 319]
          Length = 310

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSST 161
           G     V  L+ RL   G    +  +   F      A++ FQ   G+    G+    T
Sbjct: 41  GAVGDDVIELQSRLQYLGYY--NGKIDGVFGWSTYWALRNFQYEFGIKKIDGLAGWQT 96


>gi|295703232|ref|YP_003596307.1| putative peptidoglycan binding domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294800891|gb|ADF37957.1| putative peptidoglycan binding domain protein [Bacillus megaterium
           DSM 319]
          Length = 139

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V+ +++ L +             F    E AVK FQ++ G    G+V   
Sbjct: 68  ALGKGSAGEEVKTVQKSLGL--------NPDGYFGLETEQAVKEFQVKQGYTADGVVGPQ 119

Query: 161 TLEAMNVPVDLRIRQLQVNL 180
           T +A+       +     +L
Sbjct: 120 TWDALVNTSKDTVGSTSNSL 139


>gi|254562718|ref|YP_003069813.1| hypothetical protein METDI4352 [Methylobacterium extorquens DM4]
 gi|254269996|emb|CAX25982.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 232

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+  
Sbjct: 3   VAEIQRALLARGYDLGKSGADGDAGPLTIAAVTAFQRSAGLVADGIAGPKTQAALQK 59


>gi|225427814|ref|XP_002275675.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 289

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G L     S+  S  FD  +ES++K FQ  + L+ +G +D+
Sbjct: 51  KKGDKREGIQKVKQYLQRYGYLSSTHYSQMGSDDFDDALESSLKAFQTFYHLNSTGTLDA 110

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 111 PTATLMSRP 119


>gi|294501094|ref|YP_003564794.1| spore cortex-lytic enzyme [Bacillus megaterium QM B1551]
 gi|68444965|dbj|BAE02885.1| spore cortex-lytic enzyme precursor [Bacillus megaterium]
 gi|294351031|gb|ADE71360.1| spore cortex-lytic enzyme [Bacillus megaterium QM B1551]
          Length = 310

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 3/58 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSST 161
           G     V  L+ RL   G    +  +   F      A++ FQ   G+    G+    T
Sbjct: 41  GAVGDDVIELQSRLQYLGYY--NGKIDGVFGWSTYWALRNFQYEFGIKKIDGLAGWQT 96


>gi|225575004|ref|ZP_03783614.1| hypothetical protein RUMHYD_03083 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037779|gb|EEG48025.1| hypothetical protein RUMHYD_03083 [Blautia hydrogenotrophica DSM
           10507]
          Length = 416

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHG 150
           WP      L +G +   V++++E+L  I       P+  ++  +D   ++AV+ FQ   G
Sbjct: 331 WPR---YDLDIGANGAKVRQIQEQLNAIAKSYPALPTVTVNGDYDEQTKNAVRQFQGVFG 387

Query: 151 LDPSGMVDSSTLEAMN 166
           L  +G+VD ST   + 
Sbjct: 388 LPETGIVDYSTWYKIQ 403


>gi|83955785|ref|ZP_00964327.1| hypothetical protein NAS141_01831 [Sulfitobacter sp. NAS-14.1]
 gi|149204468|ref|ZP_01881434.1| Twin-arginine translocation pathway signal [Roseovarius sp. TM1035]
 gi|83839790|gb|EAP78967.1| hypothetical protein NAS141_01831 [Sulfitobacter sp. NAS-14.1]
 gi|149141967|gb|EDM30016.1| Twin-arginine translocation pathway signal [Roseovarius sp. TM1035]
          Length = 221

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 47/196 (23%)

Query: 159 SSTLEAMNVPVDLRIRQ-----LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            +  +A   P            L    +  + + +  +    + V+  A  L  +E G  
Sbjct: 34  KAAWDAQITPPGYNPATSNPWGLHPRFLPQRVITKDGLVAGDIHVDAVARYLYHIEEGGT 93

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +R  V + R     P     I R +  P+W   +++I         +DP+   D    +
Sbjct: 94  AMRYGVAIARGKLYEP-GVYTIKRKVRWPHWQPTQNMI--------DRDPELYAD----I 140

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN-NTY--MHDTPEPI 330
            D                         +PG  NA+ S  +  Y  + +TY  +H TP+P 
Sbjct: 141 ADG-----------------------MEPGPENALGSRALYLYVGDRDTYLRIHGTPQPR 177

Query: 331 LFNNVVRFETSGCVRV 346
                 R  +SGCVR+
Sbjct: 178 SIG--GRA-SSGCVRM 190


>gi|294677126|ref|YP_003577741.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
 gi|294475946|gb|ADE85334.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
          Length = 195

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 32/140 (22%), Gaps = 44/140 (31%)

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
            G         V +    T   ++ I R   NP W    S+I                  
Sbjct: 82  EGADYRIYPTSVPKSPELTRTGYTEIVRKRENPSWTPTASMIAA---------------- 125

Query: 270 NIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEP 329
                                           PG  N + +  +         +H T + 
Sbjct: 126 ------------DPSLRPM------------PPGPDNPLGTRAMYLDWPAYI-IHGTHDT 160

Query: 330 ILFNNVVRFETSGCVRVRNI 349
                  R  +SGC+ + N 
Sbjct: 161 RKIG---RKSSSGCIGLFNA 177


>gi|218510721|ref|ZP_03508599.1| hypothetical protein RetlB5_26833 [Rhizobium etli Brasil 5]
          Length = 215

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 44/161 (27%), Gaps = 19/161 (11%)

Query: 206 EAVENGKVGLRSTVIVGRVDRQT---------PILHSRINRIMFNPYWVIPRSIIQKDMM 256
            AV+NG     +                    PI    ++      Y ++      +  +
Sbjct: 22  TAVDNGVTYRSTNFAKIDKKWHRQVVKYFSSEPIGTVVVDTRHHFLYVIMENKTAIRYGV 81

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
            + R+  ++     I       +       +     P    F       N +    +  +
Sbjct: 82  GVGREGFKWFGRATIDAKSLWPRWTPPP--EMRKRHPELPEFVDGGSPKNPLGPRAMYLH 139

Query: 317 SRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
                     H T EP          +SGC+R+   + IDL
Sbjct: 140 RDGVDTGYRFHGTLEPWSIGKD---ASSGCIRMFNEDAIDL 177


>gi|332707297|ref|ZP_08427350.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
 gi|332354031|gb|EGJ33518.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
          Length = 422

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 2/71 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V  ++ +L      D        +    E AV LFQ   GL   G+VDS T
Sbjct: 61  LLKGSRGKEVALVQAKLKHLDFYD--GLEDGVYGEDTEKAVALFQESVGLRKLGVVDSVT 118

Query: 162 LEAMNVPVDLR 172
            + +      +
Sbjct: 119 RKELEQAYAAK 129


>gi|329894374|ref|ZP_08270244.1| general secretion pathway protein A [gamma proteobacterium
           IMCC3088]
 gi|328923170|gb|EGG30493.1| general secretion pathway protein A [gamma proteobacterium
           IMCC3088]
          Length = 121

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+  + V  + +R     D          F   +   V  FQ   GL   GMV   TL 
Sbjct: 41  LGSIGLDVVDIAQRFGRY-DRTNQVLADEVFTQALHERVIQFQAEQGLTTDGMVGRETLV 99

Query: 164 AMNVPVDLR 172
           A+   ++ R
Sbjct: 100 ALAAQMNER 108


>gi|316933177|ref|YP_004108159.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris DX-1]
 gi|315600891|gb|ADU43426.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris DX-1]
          Length = 288

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ +++ L   G       +S ++D    
Sbjct: 187 RSLAASGVGLWVEPARIVPGPALKQGTEGEEVRLMQQALADYGY---RVPVSGSYDHATA 243

Query: 140 SAVKLFQMRHG-LDPSGMVDSSTLE 163
             V  FQ         G+ D+STL 
Sbjct: 244 DVVTAFQRHFRPEKVDGIADASTLA 268


>gi|218459358|ref|ZP_03499449.1| hypothetical protein RetlK5_07652 [Rhizobium etli Kim 5]
          Length = 184

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 40/153 (26%), Gaps = 47/153 (30%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L  +   K  +R  V VGR   +     + I+     P W  P  + ++           
Sbjct: 67  LYVIMENKTAIRYGVGVGREGFK-WFGRATIDAKSLWPRWTPPPEMRKRH---------- 115

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NT 321
                                       P    F       N +    +  +        
Sbjct: 116 ----------------------------PELPEFVAGGSPKNPLGPRAMYLHRDGVDTGY 147

Query: 322 YMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
             H T EP          +SGC+R+   + IDL
Sbjct: 148 RFHGTLEPWSIGKD---ASSGCIRMFNEDAIDL 177


>gi|271961885|ref|YP_003336081.1| hypothetical protein Sros_0306 [Streptosporangium roseum DSM 43021]
 gi|270505060|gb|ACZ83338.1| hypothetical protein Sros_0306 [Streptosporangium roseum DSM 43021]
          Length = 401

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 48/154 (31%), Gaps = 14/154 (9%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             LP  R L  G     V++L   L   G       +   +      AV  +Q   GLD 
Sbjct: 153 GSLPAYRTLAQGVEGPDVRQLERNLKALGY--GGFTVDEEYTYATAEAVMRWQEDRGLDE 210

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL----LEQKMGLRYVLVNIPAASLEAVE 209
           +G V+   +  +  P  +R+  LQ     +       L      R V V + AA      
Sbjct: 211 TGTVELGHV--VFAPHAVRVESLQAGKGDLTAPGGKVLSYTGTTRAVTVELDAADQRLAR 268

Query: 210 NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY 243
            G       V V   D  T          + +P 
Sbjct: 269 KGA-----KVTVTLPDDTTVKGRVDEVTTVIDPG 297


>gi|218528353|ref|YP_002419169.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218520656|gb|ACK81241.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 232

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 19/57 (33%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V  ++  L+  G      G          +AV  FQ   GL   G+    T  A+  
Sbjct: 3   VAEIQRALLARGYDLGPSGADGDAGPRTIAAVTAFQYSAGLVADGIAGPRTQAALQK 59


>gi|302760259|ref|XP_002963552.1| hypothetical protein SELMODRAFT_404832 [Selaginella moellendorffii]
 gi|300168820|gb|EFJ35423.1| hypothetical protein SELMODRAFT_404832 [Selaginella moellendorffii]
          Length = 433

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L  G     V+ L+E L   G       +   +F +  + AVK +Q   G    G+V
Sbjct: 230 ARSLKYGAEGDDVKLLQEALAKLGFYCGDDDMEYASFSSGTDRAVKSWQSSIGAAEDGIV 289

Query: 158 DSSTLEAM 165
            +  L  +
Sbjct: 290 TAQVLSQL 297


>gi|302799535|ref|XP_002981526.1| hypothetical protein SELMODRAFT_421058 [Selaginella moellendorffii]
 gi|300150692|gb|EFJ17341.1| hypothetical protein SELMODRAFT_421058 [Selaginella moellendorffii]
          Length = 433

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L  G     V+ L+E L   G       +   +F +  + AVK +Q   G    G+V
Sbjct: 230 ARSLKYGAEGDDVKLLQEALAKLGFYCGDDDMEYASFSSGTDRAVKSWQSSIGAAEDGIV 289

Query: 158 DSSTLEAM 165
            +  L  +
Sbjct: 290 TAQVLSQL 297


>gi|225427820|ref|XP_002275830.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 287

 Score = 49.6 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+    +Q++++ L   G L     S+  S  FD  +ES++K FQ  + L+ +G +D+
Sbjct: 51  KKGDKREGIQKVKQYLQRYGYLSSTHYSQMGSDDFDDALESSLKAFQTFYHLNSTGTLDA 110

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 111 PTATLMSKP 119


>gi|327485350|gb|AEA79756.1| VgrG-3 protein [Vibrio cholerae LMA3894-4]
          Length = 839

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 12/100 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                  G+V   TL A++  +       + + M +K L 
Sbjct: 782 YSIGPVDGIVGKGTLLALDEALMDGWV-YENDEMDLKWLT 820


>gi|154685699|ref|YP_001420860.1| XlyA [Bacillus amyloliquefaciens FZB42]
 gi|154351550|gb|ABS73629.1| XlyA [Bacillus amyloliquefaciens FZB42]
          Length = 292

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 4/69 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +      AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAVNNGIDGIYGPKTADAVARFQSVNGLTSDGVYG 281

Query: 159 SSTLEAMNV 167
            +    + +
Sbjct: 282 PAVKAKILM 290


>gi|39936601|ref|NP_948877.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris CGA009]
 gi|39650457|emb|CAE28980.1| Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine
           amidase, family 2 [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ L++ L   G       ++ ++D    
Sbjct: 160 RSLAASGVGLWVEPARIVPGPALKQGTEGDEVRLLQQALADYGY---RVPVNGSYDHATT 216

Query: 140 SAVKLFQMRHG-LDPSGMVDSSTLE 163
             V  FQ         G+ D+STL 
Sbjct: 217 DVVTAFQRHFRPEKVDGIADASTLA 241


>gi|89070991|ref|ZP_01158214.1| probable carnitine operon oxidoreductase [Oceanicola granulosus
           HTCC2516]
 gi|89043454|gb|EAR49669.1| probable carnitine operon oxidoreductase [Oceanicola granulosus
           HTCC2516]
          Length = 83

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSG 342
           ++    +   +      G  N + +  +      R+  Y +H TP+P          ++G
Sbjct: 2   IEREPEKYERYAGGVPGGPDNPLGARALYLYRNGRDTLYRIHGTPQPWTVGLSS---SNG 58

Query: 343 CVRVRN 348
           C+R+ N
Sbjct: 59  CIRMYN 64


>gi|83954982|ref|ZP_00963660.1| hypothetical protein NAS141_00885 [Sulfitobacter sp. NAS-14.1]
 gi|83840708|gb|EAP79880.1| hypothetical protein NAS141_00885 [Sulfitobacter sp. NAS-14.1]
          Length = 222

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 62/192 (32%), Gaps = 51/192 (26%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           D +T     V      + ++ N            G  +  V+  A  L  +++    +R 
Sbjct: 48  DPATTNPWGVAPRFLPQLVEAN-------PGLTPGDIH--VDAVARYLYHIQDNGTAMRY 98

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEK 277
            V + R +   P     I R    P W   +++I        R+DP+  + +     D  
Sbjct: 99  GVAIARGNLYEP-GTYSIKRKAKWPTWTPTQNMI--------RRDPELYEQH----ADG- 144

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNN 334
                                  D G  N + S  +     +R+    +H +P P     
Sbjct: 145 ----------------------MDAGPQNPLGSRALYLFVGNRDTYLRIHGSPNPQSIG- 181

Query: 335 VVRFETSGCVRV 346
             R  +SGCVR+
Sbjct: 182 -GRA-SSGCVRM 191


>gi|302876661|ref|YP_003845294.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687336|ref|ZP_07629782.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579518|gb|ADL53530.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 444

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 8/117 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPS 154
           P  PL +G S   V+ ++  L  IS        +     +D     AVK FQ    L  S
Sbjct: 328 PGYPLGVGESGEYVKTVQTYLNFISEYYPVIDKIDVNGHYDIKTAIAVKKFQELFSLSGS 387

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIK-----KLLEQKMGLRYVLVNIPAASLE 206
           G+VD +T  ++           + ++ R++       +   +   Y  + I    LE
Sbjct: 388 GIVDFATWYSIAKLYVSLATTAENDVNRLRAFREGIFIPPTIDEEYGYIPIIKYPLE 444


>gi|319407603|emb|CBI81253.1| putative membrane-bound lytic murein transglycosylase [Bartonella
           sp. 1-1C]
          Length = 418

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+ RL   GD D    +        + A+K FQ+RHGL+ +G  +  TL  +  
Sbjct: 364 IELQSRLAKLGDYDGE--IDGKIGTATKKAIKAFQLRHGLEENGYPNYETLSHIRK 417


>gi|119486197|ref|ZP_01620257.1| carboxypeptidase [Lyngbya sp. PCC 8106]
 gi|119456688|gb|EAW37817.1| carboxypeptidase [Lyngbya sp. PCC 8106]
          Length = 536

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                V++L+E L   G    +      F    ++AV+ FQ   GL   G+V 
Sbjct: 206 MQGERVRQLQEDLANVG---IAITADGIFGKQTDAAVRKFQAEQGLQVDGIVG 255


>gi|254501042|ref|ZP_05113193.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222437113|gb|EEE43792.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 249

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   +++++  L   G       +         +A+K F++  GL  +G  +  TLE +
Sbjct: 182 DSDPRLKKIQYALSELGY--GPLTVDGLMGTNTAAALKRFELDRGLPITGEANPQTLERL 239

Query: 166 NVPVDLR 172
            +    R
Sbjct: 240 EMVSGQR 246


>gi|15966561|ref|NP_386914.1| putative membrane-bound lytic murein transglycosylase protein
           [Sinorhizobium meliloti 1021]
 gi|307300402|ref|ZP_07580182.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
 gi|307318267|ref|ZP_07597702.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
 gi|15075832|emb|CAC47387.1| Membrane-bound lytic murein transglycosylase precursor
           [Sinorhizobium meliloti 1021]
 gi|306895949|gb|EFN26700.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
 gi|306904568|gb|EFN35152.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
          Length = 405

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +      IA Y  +  R  WP  P   L +         L+ RL   G  D    +   F
Sbjct: 322 VGLLADQIAGYAGMQQR--WPR-PDGSLDI----SEKFELQNRLKELGYYDGE--VDGNF 372

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +  ++A++ FQ ++GL P G      L A+  
Sbjct: 373 GSGSKAAIQAFQNQNGLAPDGEPTQHLLRALRR 405


>gi|229527893|ref|ZP_04417284.1| VgrG protein [Vibrio cholerae 12129(1)]
 gi|229334255|gb|EEN99740.1| VgrG protein [Vibrio cholerae 12129(1)]
          Length = 1037

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 20/160 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
                  G+V   TL A++  +       + + M +K L                   E 
Sbjct: 782 YSIGPVDGIVGKGTLLALDEALMDGWV-YENDEMDLKWLTVP--------KGQLTFDAEG 832

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +       S  +     R + I +S +           P
Sbjct: 833 NDVDSSTFFSRKVHVPNMRGSVIGNSGVTIGRGLDLGNPP 872


>gi|330468307|ref|YP_004406050.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
 gi|328811278|gb|AEB45450.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
          Length = 336

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+L  R L  G++   V+ L+    ++G L     +   F    E+ V+ FQ    L   
Sbjct: 184 PKLGDRVLRRGSTGSDVRELQT---LAGRLGGDLAVDGDFGPRTETWVRDFQKAQRLTVD 240

Query: 155 GMVDSS 160
           G+V + 
Sbjct: 241 GVVGAQ 246



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 4/69 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R +  G++   V  ++      G+       + +FDA  ES V+ +Q   G+   G+V 
Sbjct: 268 SRTVRRGSTGEDVAFVQR---FVGE-RRCGPATGSFDAKTESGVRWYQGMRGITVDGVVG 323

Query: 159 SSTLEAMNV 167
             T   M V
Sbjct: 324 PLTWRQMGV 332


>gi|145593093|ref|YP_001157390.1| peptidoglycan binding domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145302430|gb|ABP53012.1| Peptidoglycan-binding domain 1 protein [Salinispora tropica
           CNB-440]
          Length = 334

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 40/146 (27%), Gaps = 30/146 (20%)

Query: 36  LDEIINESYHSIVND--RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGG 93
             + +      + +         A     + + + I+  ET+ Q  K          +GG
Sbjct: 127 RGQAVTSDSSHLWHIHISVHRKYADDMTAMRAILSILKGETVEQWRKG---------QGG 177

Query: 94  WPELPIRP--------LH---LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            P  P  P        L           V  +++                 F     SAV
Sbjct: 178 TPSPPPLPDQAAGSRMLRLTVPYARGTDVAAVQD--------AVGATRDGVFGPKTRSAV 229

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +Q   GL P G+V   T   +   
Sbjct: 230 IKYQRARGLTPDGIVGPKTWATLLGS 255



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 5/64 (7%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+ ++  +               F     S V+ +Q   GL P G+V   T   +
Sbjct: 274 MRGTDVEAVQRFIGA-----RCGAADGIFGTKTASGVRWYQRMRGLTPDGIVGPKTWAPI 328

Query: 166 NVPV 169
              +
Sbjct: 329 VRTI 332


>gi|78185249|ref|YP_377684.1| hypothetical protein Syncc9902_1682 [Synechococcus sp. CC9902]
 gi|78169543|gb|ABB26640.1| conserved hypothetical protein [Synechococcus sp. CC9902]
          Length = 163

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 51/158 (32%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             +  V +G++     V +G     TP     I     +P +V  +S  +K++       
Sbjct: 43  REISVVLDGRMRGSWPVAIGDPKTPTPQGEFSILTKKIDPIYVSKKSGQRKEL------- 95

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-SRNNT 321
                                                   G  + +    + F+ +    
Sbjct: 96  ---------------------------------------SGPTSPIGDRYLAFHRNGRGE 116

Query: 322 -YMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
             +H TP P          + GCVR+ N  +  L   +
Sbjct: 117 FGIHGTPWPHWV-KTRAAVSLGCVRMLNVHVRQLFDLV 153


>gi|17228635|ref|NP_485183.1| hypothetical protein all1140 [Nostoc sp. PCC 7120]
 gi|17130486|dbj|BAB73097.1| all1140 [Nostoc sp. PCC 7120]
          Length = 313

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V+ L+ R            +   + A  E+A+K FQ ++GL   G++   + + +
Sbjct: 262 GPVVRYLQFR--------VGVEVDGIYGAQTEAAIKRFQRQNGLLADGIIGPMSWQRL 311



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +P  P    N   S+ RL++   RL I+G  + S   +   +   + A++ FQ   GL+
Sbjct: 174 PVPSVPDEEQNIDTSILRLQKSLNRLKITGRSNKSLVENSQLNTETKFAIERFQGIVGLE 233

Query: 153 PSGMVDSSTLEAMNVPVDLRI 173
            +G+V+ +T  A+N+ +  RI
Sbjct: 234 KTGIVNEATWNAINLILAKRI 254


>gi|114707493|ref|ZP_01440389.1| N-acetylmuramoyl-L-alanine amidase [Fulvimarina pelagi HTCC2506]
 gi|114537052|gb|EAU40180.1| N-acetylmuramoyl-L-alanine amidase [Fulvimarina pelagi HTCC2506]
          Length = 258

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 5/92 (5%)

Query: 80  KAIAFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAF 134
            A A Y+ +L R       +    L  G     V   R  L I  D            AF
Sbjct: 128 DATAEYKGLLGRAAPVLDAMADEILERGERGPDVAAWRRDLDIWRDRIAHPWGMPDGDAF 187

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           D  VE A   FQ   G+   G V   T E M 
Sbjct: 188 DHTVELATLHFQKTRGIVADGKVGPQTREEME 219


>gi|254689361|ref|ZP_05152615.1| hypothetical protein Babob68_04147 [Brucella abortus bv. 6 str.
           870]
 gi|254701878|ref|ZP_05163706.1| hypothetical protein Bsuib55_13627 [Brucella suis bv. 5 str. 513]
 gi|254704424|ref|ZP_05166252.1| hypothetical protein Bsuib36_10950 [Brucella suis bv. 3 str. 686]
 gi|254706680|ref|ZP_05168508.1| hypothetical protein BpinM_06754 [Brucella pinnipedialis
           M163/99/10]
 gi|254710212|ref|ZP_05172023.1| hypothetical protein BpinB_08057 [Brucella pinnipedialis B2/94]
 gi|254714209|ref|ZP_05176020.1| hypothetical protein BcetM6_12826 [Brucella ceti M644/93/1]
 gi|254717645|ref|ZP_05179456.1| hypothetical protein BcetM_14825 [Brucella ceti M13/05/1]
 gi|256031706|ref|ZP_05445320.1| hypothetical protein BpinM2_13829 [Brucella pinnipedialis
           M292/94/1]
 gi|256061219|ref|ZP_05451370.1| hypothetical protein Bneo5_12758 [Brucella neotomae 5K33]
 gi|256255107|ref|ZP_05460643.1| hypothetical protein BcetB_12606 [Brucella ceti B1/94]
 gi|260168838|ref|ZP_05755649.1| hypothetical protein BruF5_10826 [Brucella sp. F5/99]
          Length = 215

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           +  ++  +A+ +Q  ++     I    E  + +   E ++ +      F    D G  N 
Sbjct: 96  TTARRYGIAVGKQGLEFQGKATISAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 155

Query: 308 MASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           + S  +  +  N      +H T +P    +     ++GC R+   +++DL   +   T 
Sbjct: 156 LGSRAMYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYDRVTLGTE 211


>gi|152977393|ref|YP_001376910.1| carboxyl-terminal protease [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152026145|gb|ABS23915.1| carboxyl-terminal protease [Bacillus cytotoxicus NVH 391-98]
          Length = 478

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  ++ L   G +         F    ESAVK FQ  + L+ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQQMLKSLGYVP--GREDGYFSKETESAVKAFQNANQLEATGKLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQNKIIEKIRS 462


>gi|297562125|ref|YP_003681099.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296846573|gb|ADH68593.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 193

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 2/64 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              G++   V  ++  L      +        +    E AV+  Q   G+   G+    +
Sbjct: 124 FRRGDTGPVVTMIQRELNAK--FNAHLATDGVYGPATERAVRAAQEHFGIGVDGVFGPVS 181

Query: 162 LEAM 165
             A+
Sbjct: 182 FHAV 185



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WPE       LG+SS+ V    + L+ SG+++P   L++ FD  +   +  +Q   GL  
Sbjct: 50  WPE-----YTLGDSSIDVYA-AKMLLSSGEINP-GELNLEFDQDLHDTLVTYQEAFGLHN 102

Query: 154 SGMVDSSTLEAMN 166
            G ++  T E   
Sbjct: 103 DGDLNPDTWEHFQ 115


>gi|327440155|dbj|BAK16520.1| periplasmic protease [Solibacillus silvestris StLB046]
          Length = 500

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 6/100 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +      +  S++     L + G       +   FD   E+A+K +Q  + L+ +G++
Sbjct: 403 PSQQYEKEANHASIKTAERILEVLGY--EPGKVDTQFDGATEAALKAYQQDNDLEVTGIL 460

Query: 158 DSSTLEAMNVPVDLRIR----QLQVNLMRIKKLLEQKMGL 193
              T  A+   +  +++    Q+      +    E+    
Sbjct: 461 TGDTTYALMDAISEKLKTEDPQILKAKELLDIKPEETTNE 500


>gi|312114454|ref|YP_004012050.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311219583|gb|ADP70951.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 263

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 8/82 (9%)

Query: 87  DILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            +   G W    P +    L  G+   +V+ L+++L   G       ++ A+D      V
Sbjct: 168 ALGGIGHWVEPAPIVEGDALDTGSCGAAVRELQKKLAAYGY---GIDVTGAYDDATRIVV 224

Query: 143 KLFQMRHGLD-PSGMVDSSTLE 163
           + FQ         G  D STL+
Sbjct: 225 RAFQRHFRPALVDGRADPSTLK 246


>gi|212640371|ref|YP_002316891.1| periplasmic protease [Anoxybacillus flavithermus WK1]
 gi|212561851|gb|ACJ34906.1| Periplasmic protease [Anoxybacillus flavithermus WK1]
          Length = 491

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL    ++  V+  ++ L   G           F    E AV+ FQ  +GL  +G +D
Sbjct: 401 DKPLAYDMNNEQVKSAQQMLKGLGF--DPGREDGYFSKQTEQAVQAFQKANGLQATGKID 458

Query: 159 SSTLEAMNVPVDLRIR 174
             T   +   V   +R
Sbjct: 459 KQTANMLQTKVMEAVR 474


>gi|209886236|ref|YP_002290093.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
 gi|209874432|gb|ACI94228.1| ErfK/YbiS/YcfS/YnhG [Oligotropha carboxidovorans OM5]
          Length = 190

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIID 351
           P+       G  N + +  +         +H + EP          +SGC R+   ++ID
Sbjct: 120 PDLPRHMPGGPDNPLGARALYLG-STLYRIHGSNEPETIGQ---AVSSGCFRMVNEDVID 175

Query: 352 L 352
           L
Sbjct: 176 L 176


>gi|189218117|ref|YP_001938759.1| hypothetical protein Minf_0100 [Methylacidiphilum infernorum V4]
 gi|189184975|gb|ACD82160.1| Uncharacterized protein, ErfK family [Methylacidiphilum infernorum
           V4]
          Length = 298

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 53/198 (26%), Gaps = 39/198 (19%)

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
             P   R+  +   L  I   ++    +  + + +    L   + G++   + +  G  D
Sbjct: 133 KKPGTERVYTVSRILPAIWWNIDPSQKVTKLEIVLSEQKLYVYQGGRLAAIAPICSGTKD 192

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
             TP+    +               I K+++    +   ++      +       +    
Sbjct: 193 HPTPLGRFAV---------------INKEILHRSNKYGCFVDSKGKIIYANATVGMTPPA 237

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                P    F  R                   +   +H    P          + GCVR
Sbjct: 238 GLHYEPADMPFFLRLT----------------DDGVGLHGGYLPGY------AASHGCVR 275

Query: 346 VRN--IIDLDVWLLKDTP 361
           +      DL   +   TP
Sbjct: 276 LPKSFAQDLYPLVSLGTP 293


>gi|2632002|emb|CAA05561.1| N-Acetylmuramoyl-L-alanine amidase [Bacillus subtilis]
          Length = 103

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              S   V +++  L            + G+   +      AV  FQ  +GL   G+   
Sbjct: 33  PYTSGEHVFQVQRALAALYFYPDKGAVNNGIDGVYGPKTADAVARFQSVNGLTADGIYGP 92

Query: 160 STLEAMNV 167
           +T E +  
Sbjct: 93  ATKEKIAA 100


>gi|21553383|gb|AAM62476.1| proteinase like protein [Arabidopsis thaliana]
          Length = 364

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVKDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|15235820|ref|NP_193397.1| matrix metalloproteinase, putative [Arabidopsis thaliana]
 gi|2245019|emb|CAB10439.1| proteinase like protein [Arabidopsis thaliana]
 gi|7268414|emb|CAB78706.1| proteinase like protein [Arabidopsis thaliana]
 gi|332658379|gb|AEE83779.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 364

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|28393482|gb|AAO42162.1| putative proteinase [Arabidopsis thaliana]
          Length = 364

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            +G+    V  L+  L   G + D S+  S  FD  +ESA+ L+Q   GL  +G +D+ST
Sbjct: 62  QIGSHVSGVSELKRYLHRFGYVNDGSEIFSDVFDGPLESAISLYQENLGLPITGRLDTST 121

Query: 162 LEAMNVP 168
           +  M++P
Sbjct: 122 VTLMSLP 128


>gi|170750859|ref|YP_001757119.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170657381|gb|ACB26436.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 187

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 56/188 (29%), Gaps = 48/188 (25%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
             +    ++K G   ++V+     L  V  G   +R  V VGR    +      +     
Sbjct: 46  ETVAWTGKEKPGT--IVVSTRQRRLYYVLGGGAAVRYGVGVGRQG-FSWSGTKTVTMKKE 102

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W  P+ ++ +                                        P+     
Sbjct: 103 WPDWRPPQQMLARR---------------------------------------PDLPRYM 123

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLK 358
             G+ N + +  +   S     +H + EP          +SGC+R+ N  ++DL   +  
Sbjct: 124 AGGQDNPLGARALYLGSS-LYRIHGSNEPETMGA---AVSSGCIRMTNKDVVDLYDRVRV 179

Query: 359 DTPTWSRY 366
            T    R 
Sbjct: 180 GTKVVVRD 187


>gi|318079927|ref|ZP_07987259.1| hypothetical protein SSA3_25371 [Streptomyces sp. SA3_actF]
          Length = 93

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V +L ERL   G           FD  +E A+  +Q+  G     G
Sbjct: 18  VTQAVLRRGDSGPEVAKLEERLRAVGIYP--GRDDGRFDRGLEYALMTYQVTRGASDEHG 75

Query: 156 MVDSSTLEAMN 166
           +  + T   + 
Sbjct: 76  VYGADTRTKLE 86


>gi|74317235|ref|YP_314975.1| hypothetical protein Tbd_1217 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056730|gb|AAZ97170.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 164

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 17/48 (35%), Gaps = 5/48 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
                 Y+H T E           + GCVR++N    +L   +   T 
Sbjct: 116 SHDRYIYIHGTNEEHRIGTP---ASHGCVRMKNADVAELFELVEVGTE 160


>gi|327189772|gb|EGE56916.1| hypothetical protein RHECNPAF_550040 [Rhizobium etli CNPAF512]
          Length = 190

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 6/66 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                        G +N + +  I  Y    +  Y +H T E         F +SGC R+
Sbjct: 113 KARAAGLPDLVPAGPLNPLGARGIYLYKGGTDTLYRIHGTNEQSTVG---GFASSGCFRM 169

Query: 347 RNIIDL 352
            N   +
Sbjct: 170 SNADVI 175


>gi|153954450|ref|YP_001395215.1| hydrolase [Clostridium kluyveri DSM 555]
 gi|219855040|ref|YP_002472162.1| hypothetical protein CKR_1697 [Clostridium kluyveri NBRC 12016]
 gi|146347331|gb|EDK33867.1| Predicted hydrolase [Clostridium kluyveri DSM 555]
 gi|219568764|dbj|BAH06748.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 279

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 23/62 (37%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +  G+ S  V  L+++L + G L       + +D     AV   Q        G++   T
Sbjct: 213 IAKGHKSHIVLWLQQKLEMWGYLKKGSYTDMIYDEPTFQAVTELQKNWERPTDGVLKIET 272

Query: 162 LE 163
             
Sbjct: 273 WN 274


>gi|332560304|ref|ZP_08414626.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides WS8N]
 gi|332278016|gb|EGJ23331.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides WS8N]
          Length = 260

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 44/189 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  + L  + +R +           ++V+  A  L  V+ G+  LR  + VGR  R  
Sbjct: 56  PAVPPQYLSADKVRREVDYFTDRPPGTIVVDPYARYLYLVQPGQRALRYAIAVGREGR-G 114

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W+  +S+I +                              E+   
Sbjct: 115 FSGEAVIPIKREWPRWIPTKSMIAE----------------------------DPEQYGP 146

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       D G  N + +  +  +   ++  Y +H T +           ++GC+R
Sbjct: 147 WKDG-------MDGGLSNPLGARALYLHRDGKDTYYRIHGTNDVSSIGK---ATSAGCIR 196

Query: 346 V--RNIIDL 352
           +  ++I+DL
Sbjct: 197 LWNQDILDL 205


>gi|86158504|ref|YP_465289.1| peptidoglycan-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775015|gb|ABC81852.1| peptidoglycan-binding protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 135

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 9/88 (10%)

Query: 86  QDILSRGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           + +  RG  P +P  P   L  G        LR+R    G L          D    +A+
Sbjct: 41  RGVPPRGERPRVPASPEALLAPGAVGEIQDALRDR----GYL--GAHRRGELDRATSAAL 94

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           + FQ   GL  +G  D  TL  ++V   
Sbjct: 95  RRFQEAQGLAATGAPDRETLRRLHVDPA 122


>gi|86360586|ref|YP_472474.1| hypothetical protein RHE_PE00312 [Rhizobium etli CFN 42]
 gi|86284688|gb|ABC93747.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 187

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 21/64 (32%), Gaps = 6/64 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                        G +N + +  I  Y    +  Y +H T E         F +SGC R+
Sbjct: 110 KARAVGLPDLVPAGPLNPLGARGIYLYKGGTDTLYRIHGTNEQSTVG---GFASSGCFRM 166

Query: 347 RNII 350
            N  
Sbjct: 167 SNAD 170


>gi|75910593|ref|YP_324889.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75704318|gb|ABA23994.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 313

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V+ L+ R            +   + A  E+A+K FQ ++GL   G++   + + +
Sbjct: 262 GPVVRYLQFR--------VGVEVDGIYGAQTEAAIKRFQRQNGLLADGIIGPMSWQKL 311



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 3/81 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRE---RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +P  P    N   S+ RL++   RL I+   + S   +   +A  + A++ FQ   GL+
Sbjct: 174 PVPSVPDEEQNIDTSILRLQKSLNRLKITDRSNKSLVENGQLNAETKFAIERFQGIVGLE 233

Query: 153 PSGMVDSSTLEAMNVPVDLRI 173
            +G+V+ +T  A+N+ +  RI
Sbjct: 234 KTGIVNEATWNAINLILAKRI 254


>gi|304405442|ref|ZP_07387101.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304345481|gb|EFM11316.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 293

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 7/75 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM- 156
            L  G     VQ+L+ +L   G              F      AV  F+  + L  +G  
Sbjct: 15  SLDPGTFKPEVQQLQSQLNALGYKGSTQKPLVADGKFGPNTLYAVNAFKAANKLGNTGAS 74

Query: 157 ---VDSSTLEAMNVP 168
              V   T +A+  P
Sbjct: 75  QGKVGPQTWKALFSP 89


>gi|254459887|ref|ZP_05073303.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206676476|gb|EDZ40963.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 190

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 46/168 (27%), Gaps = 46/168 (27%)

Query: 202 AASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
           + +L     +G         V   D  T   ++ I R    P W  P   +++       
Sbjct: 67  SRALNYWNADGSDYRVYPTSVPMTDELTKRGYTEIVRKKVGPTWT-PTKAMRE------- 118

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +DP                                     + G  N + S  +       
Sbjct: 119 RDPA-------------------------------LPDFMEAGAGNPLGSHAMYLSWP-A 146

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
             +H T +        R  +SGC+ + N   +   L   TP  ++  +
Sbjct: 147 YLIHGTHDTRKIG---RRSSSGCIGLYN-EKIAE-LFAITPIGTQVRV 189


>gi|315640706|ref|ZP_07895808.1| S41A carboxy-terminal processing protease [Enterococcus italicus
           DSM 15952]
 gi|315483461|gb|EFU73955.1| S41A carboxy-terminal processing protease [Enterococcus italicus
           DSM 15952]
          Length = 475

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      + LG  S +V+ L   L   G     K     +    ++AVK  Q +  L  +
Sbjct: 384 PLPTDIEMALGLESSNVKSLNTYLAGLGY----KTSGDKYTEETQAAVKDIQKKKQLTVT 439

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G+VD  T EA++     +++ 
Sbjct: 440 GIVDKKTAEAISQAAADQLKT 460


>gi|227823392|ref|YP_002827365.1| putative peptidoglycan-binding protein [Sinorhizobium fredii
           NGR234]
 gi|227342394|gb|ACP26612.1| putative peptidoglycan-binding protein [Sinorhizobium fredii
           NGR234]
          Length = 405

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP  P   L +         L+ RL   G  D    +   F +  ++A++ FQ ++GL P
Sbjct: 339 WPR-PDGSLDI----SEKFELQNRLKELGYYDGE--VDGNFGSGSKAAIQAFQTQNGLTP 391

Query: 154 SGMVDSSTLEAMNV 167
            G    + L A+  
Sbjct: 392 DGEPTQNLLRALRK 405


>gi|170746489|ref|YP_001752749.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
 gi|170653011|gb|ACB22066.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
          Length = 396

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              ++ L+  L  +G  D            +  AV+ +Q+  GL   G    + L+ +  
Sbjct: 333 GPGLRALQTGLAAAGFYD--GPTDGRAGPKLREAVRRYQISAGLPADGYATPALLDRVTG 390

Query: 168 PVDLR 172
               R
Sbjct: 391 KAAPR 395


>gi|17987652|ref|NP_540286.1| hypothetical protein BMEI1369 [Brucella melitensis bv. 1 str. 16M]
 gi|17983365|gb|AAL52550.1| protein ybis precursor [Brucella melitensis bv. 1 str. 16M]
          Length = 211

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 60/198 (30%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V +    LR  V +GR     
Sbjct: 47  PAIPIQKMDTRYLRQVVPDPTGEMPGTIVIDTANRFCYLVLDNGQALRYGVGIGREGFA- 105

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 106 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 137

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 138 SAKNGGM-----APGLKNPLGARALYIFKDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 189

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   TP
Sbjct: 190 FLNQDIIDLYDRVPAKTP 207


>gi|256395739|ref|YP_003117303.1| XRE family transcriptional regulator [Catenulispora acidiphila DSM
           44928]
 gi|256361965|gb|ACU75462.1| transcriptional regulator, XRE family [Catenulispora acidiphila DSM
           44928]
          Length = 239

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L +      V  L+  L  +G      G+   F    E AV   Q    LD  G V   T
Sbjct: 176 LQVDMWGAEVAELQCLLQRAGF--SPGGIDGNFGPLTELAVIKAQKADQLDVDGQVGPKT 233

Query: 162 LEAMNV 167
             A+  
Sbjct: 234 WAALRA 239


>gi|319778023|ref|YP_004134453.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171742|gb|ADV15279.1| beta-lactamase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 720

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 32/99 (32%), Gaps = 6/99 (6%)

Query: 108 SVSVQRLRERLIISGDLDPSKG-LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              V  L+  L    D       +   F +   SAVK FQ  +G+   G V   T  A+ 
Sbjct: 73  DRRVALLQSVLT---DKSVYASAIDGVFGSQTASAVKSFQSTYGMPVDGTVGMQTGSALG 129

Query: 167 VPV--DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           +P     + R L        K  E        LV I   
Sbjct: 130 LPFWQANKARSLAPPFRDDAKYPEATEFNFRSLVGIGNF 168


>gi|292669250|ref|ZP_06602676.1| LysM domain protein [Selenomonas noxia ATCC 43541]
 gi|292649091|gb|EFF67063.1| LysM domain protein [Selenomonas noxia ATCC 43541]
          Length = 233

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 2/102 (1%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +V+ ++E LI +G LD   G          +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVRHVQELLIQAGYLD--GGADGIAGPLTRAAIERCQADHMLVVDGICGEATY 113

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
             ++   +     L +   R  ++        YV     +A 
Sbjct: 114 RVLSGGAEYDPVALGITDDRGSQVSRGSGRSIYVSATAYSAY 155


>gi|284042197|ref|YP_003392537.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283946418|gb|ADB49162.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 532

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 41/134 (30%), Gaps = 25/134 (18%)

Query: 51  RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY---------QDILSRGGWPELPIR- 100
           +++         +       +   + +  +    Y          D  S   W  +    
Sbjct: 341 QYNTVYETPIYPLGQAYDGTAATDLRRFRQLSEAYGARGVSWWVWDYASTSDWGAIGAGL 400

Query: 101 ------------PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                        L + +    V   ++ L  +G    S  +   F +   SAV+ +Q  
Sbjct: 401 TPIAAPESAGYPTLRVRSKGDLVVWAQQHLSGAG---QSVTVDGDFGSGTASAVRAYQAS 457

Query: 149 HGLDPSGMVDSSTL 162
            GL  +G++D+ T 
Sbjct: 458 KGLPETGVLDADTW 471


>gi|94709138|sp|Q4L6D0|CTPAL_STAHJ RecName: Full=Probable CtpA-like serine protease
          Length = 496

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I  K     T+ A   YQ I        +P  +   +G+++  V+ ++  L   G     
Sbjct: 384 IHGKGIQPDTKIASPQYQSI------SVIPTDKSYSVGDNTKYVKSIKIGLDALGY--NV 435

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              S  FD  +ESA+K FQ  H L  +G  D  T
Sbjct: 436 NNDSKQFDTQLESAIKKFQSEHELSVNGKFDKKT 469


>gi|70726487|ref|YP_253401.1| carboxy-terminal processing proteinase ctpA [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447211|dbj|BAE04795.1| probable carboxy-terminal processing proteinase ctpA
           [Staphylococcus haemolyticus JCSC1435]
          Length = 490

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS 127
           I  K     T+ A   YQ I        +P  +   +G+++  V+ ++  L   G     
Sbjct: 378 IHGKGIQPDTKIASPQYQSI------SVIPTDKSYSVGDNTKYVKSIKIGLDALGY--NV 429

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
              S  FD  +ESA+K FQ  H L  +G  D  T
Sbjct: 430 NNDSKQFDTQLESAIKKFQSEHELSVNGKFDKKT 463


>gi|303241183|ref|ZP_07327691.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
 gi|302591310|gb|EFL61050.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
          Length = 791

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 52/163 (31%), Gaps = 17/163 (10%)

Query: 109 VSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP----SGMVDSST 161
             V  L++RL    I+ DL  +      F     +AV  ++ +HGL       G V  +T
Sbjct: 186 EEVLLLQKRLNELKITDDLGRALEEDGKFGENTLAAVNKYKKQHGLWNFGEYEGKVGQTT 245

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
            E +   + +  +   +N      L  +K   +    N     L+ ++         V V
Sbjct: 246 WEHLFKNMKVPYKGNGINSKNEAILKPEKPNSQ--DKNAENTLLKYIDQYTNFTIDGVTV 303

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
                 TP                 P  I  ++ +     +P 
Sbjct: 304 KIPYYITPKGTE------LYGGKATPEKI--REFLRKNASNPS 338


>gi|282881413|ref|ZP_06290089.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304711|gb|EFA96795.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
          Length = 289

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS----VAFDAYVESAVKLFQMRHGL 151
            +  R L  G     V  L   L     ++ S          +DA + SAVK FQ   GL
Sbjct: 121 SIGDRTLKTGIHGSDVTSLTGYLATGLYINRSWIKEKEGYALYDATIASAVKHFQKDAGL 180

Query: 152 DPSGMVDSSTLEAMN 166
             +G+ D +T+  + 
Sbjct: 181 PQTGVADQTTINKLK 195



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +    V  L   L  +G     K +         F   + +AV+ FQ  + L  +G  D 
Sbjct: 219 DKGTDVTELVNLLTKAGFAPDPKKIVMTSDGRTEFTKDIATAVRFFQAYNNLSVTGRADE 278

Query: 160 STLEAMNVPVD 170
           +T++A+     
Sbjct: 279 ATIKALIAKAQ 289


>gi|220916978|ref|YP_002492282.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954832|gb|ACL65216.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 136

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 91  RGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           RG  P +P  P   L  G        LR+R    G L          D    +A++ FQ 
Sbjct: 47  RGERPRVPSSPEALLAPGAVGEIQDALRDR----GYL--GAHRRGELDRATSAALRRFQE 100

Query: 148 RHGLDPSGMVDSSTLEAMNVPVD 170
             GL  +G  D  TL  ++V   
Sbjct: 101 AQGLAATGAPDRETLRRLHVDPA 123


>gi|304392458|ref|ZP_07374399.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
 gi|303295562|gb|EFL89921.1| ErfK/YbiS/YcfS/YnhG family protein [Ahrensia sp. R2A130]
          Length = 398

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 60/189 (31%), Gaps = 42/189 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + Q+     R +           V+V+  A  L  V+ G   +R  + VGR   + 
Sbjct: 233 AAIPVDQIDKRYYRQEVKYRSSHKPGTVVVDPHAKFLYVVQRGNTAMRYGIGVGRQGFE- 291

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  +I++     L +         +                 
Sbjct: 292 WSGEAHIGFKRVWPKWTPPVEMIERQ--PELAK--YCADCGGME---------------- 331

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N + +  +      ++  Y +H TP+           +SGC+R
Sbjct: 332 -------------GGPANPLGARALYLVADGKDTLYRLHGTPKWNSIGT---AASSGCIR 375

Query: 346 V--RNIIDL 352
           +  +++IDL
Sbjct: 376 LMNQDVIDL 384


>gi|326202028|ref|ZP_08191898.1| Peptidoglycan-binding domain 1 protein [Clostridium papyrosolvens
           DSM 2782]
 gi|325987823|gb|EGD48649.1| Peptidoglycan-binding domain 1 protein [Clostridium papyrosolvens
           DSM 2782]
          Length = 330

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL-----DPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P     +G+    V+ ++  L+ +G           G+   F    ++AV  +Q+ +GL 
Sbjct: 90  PNGCYGIGSRGEKVEDIQTALVNNGYSVGNSGPNYDGIDKTFGVDTKAAVVRYQIDNGLS 149

Query: 153 PSGMVDSSTLEAMNVPVD 170
             G+V  +T +++ V ++
Sbjct: 150 YDGIVGKNTAKSLGVNLE 167


>gi|262281175|ref|ZP_06058957.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262257406|gb|EEY76142.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 167

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GCVR+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDTQPMGVPM---SHGCVRMRNEEIIELFDLVAEDALVYLSEE 164


>gi|196234288|ref|ZP_03133118.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
 gi|196221642|gb|EDY16182.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
          Length = 200

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +S   V   ++RL   G    +  +   F A    A+  FQ  + L  SG +D++T+ A+
Sbjct: 141 DSGSLVMSAQDRLNRLGY--SAGPVDGVFGAQTRDALADFQNDNNLPVSGALDTATVRAL 198

Query: 166 N 166
            
Sbjct: 199 G 199


>gi|114776543|ref|ZP_01451588.1| hypothetical protein SPV1_02447 [Mariprofundus ferrooxydans PV-1]
 gi|114553373|gb|EAU55771.1| hypothetical protein SPV1_02447 [Mariprofundus ferrooxydans PV-1]
          Length = 118

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                +  L+E L   G   P +     F  +   A+K  Q +HGL PSG VD    + +
Sbjct: 1   MRGKRIALLQEILYRKGY--PMQDQKGVFGVHTRDAIKDIQKQHGLKPSGQVDDELFQLI 58

Query: 166 NV 167
             
Sbjct: 59  QQ 60


>gi|330883919|gb|EGH18068.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 103

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 190 KMGLRYVLV-NIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             G R  +V N+    +     G+ V     + VGR    +PI  +++     NP W  P
Sbjct: 19  PPGPREGIVLNLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPP 78

Query: 248 RSIIQKDM 255
            SI  + +
Sbjct: 79  ASIKAEHV 86


>gi|308233678|ref|ZP_07664415.1| Peptidoglycan-binding domain 1 protein [Atopobium vaginae DSM
           15829]
          Length = 306

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 12/89 (13%)

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + +  W EL      +G+              V++L+  L I G           +  + 
Sbjct: 60  VDKQMWSELVDASYTMGDRTLYLRLPNFHGNDVKQLQTCLNILGF--SCGEADGYYGVHT 117

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+AVK FQ   G    GM    T +A+  
Sbjct: 118 EAAVKEFQESQGSLGDGMAFQDTFDAIER 146



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           P+  G++  +V+ ++ RL      +D S+     F A    AV  F++ H L  S  VD 
Sbjct: 3   PIREGSTGAAVEDIQSRLTRLDYAIDSSEIKQQHFGASTARAVGKFRLDHNLSLSSDVDK 62

Query: 160 STLEAM 165
                +
Sbjct: 63  QMWSEL 68


>gi|328943610|ref|ZP_08241075.1| penicillin-resistant DD-carboxypeptidase [Atopobium vaginae DSM
           15829]
 gi|327491579|gb|EGF23353.1| penicillin-resistant DD-carboxypeptidase [Atopobium vaginae DSM
           15829]
          Length = 312

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 12/89 (13%)

Query: 89  LSRGGWPELPIRPLHLGNS----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           + +  W EL      +G+              V++L+  L I G           +  + 
Sbjct: 66  VDKQMWSELVDASYTMGDRTLYLRLPNFHGNDVKQLQTCLNILGF--SCGEADGYYGVHT 123

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           E+AVK FQ   G    GM    T +A+  
Sbjct: 124 EAAVKEFQESQGSLGDGMAFQDTFDAIER 152



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           P+  G++  +V+ ++ RL      +D S+     F A    AV  F++ H L  S  VD 
Sbjct: 9   PIREGSTGAAVEDIQSRLTRLDYAIDSSEIKQQHFGASTARAVGKFRLDHNLSLSSDVDK 68

Query: 160 STLEAM 165
                +
Sbjct: 69  QMWSEL 74


>gi|84498128|ref|ZP_00996925.1| hypothetical protein JNB_18613 [Janibacter sp. HTCC2649]
 gi|84381628|gb|EAP97511.1| hypothetical protein JNB_18613 [Janibacter sp. HTCC2649]
          Length = 611

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               +  G+   +V  L++ L I+           +F    E+ VK +Q   G+ P+G+V
Sbjct: 393 AKSVIQRGSKGPAVIALQKALRIT--------ADGSFGPGTETKVKAYQTSKGISPTGVV 444

Query: 158 DSSTLEAM 165
            S+T  A+
Sbjct: 445 ASATWAAL 452



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 22/156 (14%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIA 76
           Y +L  G S  +  I    L    +  +         +F +R  + +   +         
Sbjct: 231 YPLLKRGDSHKDLLIAQGALGLSKDGQFGPGTEAAVASFQSRNGVAVTKQLD-------N 283

Query: 77  QTEKAIAFYQDILSRGGWPELPI-------RPLHLGNSSVSVQRLRERLIISGDLDPSKG 129
            T   +   + I SR G    P          +  G+   +V  L++ L ++        
Sbjct: 284 ATWTKLVQLKLIPSRTGGTTAPSPLSAYVNTVIQRGSKGPAVIALQKALGLT-------- 335

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +F    E+ VK +Q   G+ P+G+V SST +A+
Sbjct: 336 ADGSFGPGTETKVKAYQSSKGISPTGVVASSTWKAL 371



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 7/72 (9%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   +V+ L+  L           +  AF      AVK  Q R GL  SG+V+  T
Sbjct: 481 LSAGSKGTAVKVLQAGL-------GGLAVDGAFGQATVGAVKALQTRWGLPASGVVNLKT 533

Query: 162 LEAMNVPVDLRI 173
              + + V   I
Sbjct: 534 WNRLELTVHPLI 545


>gi|255588477|ref|XP_002534615.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223524902|gb|EEF27766.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 325

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    +  L++ L   G L  +   +  FD   ESA+  +Q   GL  +G +D+ T+  
Sbjct: 28  GSEVTGMSELKKYLNRFGYLPGNVNFTDIFDLEFESAILAYQNNLGLPVTGKLDADTIST 87

Query: 165 MNVP 168
           +  P
Sbjct: 88  IMSP 91


>gi|313637289|gb|EFS02789.1| carboxy- processing protease [Listeria seeligeri FSL S4-171]
          Length = 468

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 380 SSKVYQEGDFGDDVKTIETLLKALDY--NVGKVDGLYDVDTKYAVERFQAANKLDVTGIM 437

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 438 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 468


>gi|313632728|gb|EFR99698.1| carboxy- processing protease [Listeria seeligeri FSL N1-067]
          Length = 512

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 424 SSKVYQEGDFGDDVKTIETLLKALDY--NVGKVDGLYDVDTKYAVERFQAANKLDVTGIM 481

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 482 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 512


>gi|289435194|ref|YP_003465066.1| carboxypeptidase family protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
 gi|289171438|emb|CBH27982.1| carboxypeptidase family protein [Listeria seeligeri serovar 1/2b
           str. SLCC3954]
          Length = 497

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 409 SSKVYQEGDFGDDVKTIETLLKALDY--NVGKVDGLYDVDTKYAVERFQAANKLDVTGIM 466

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 467 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 497


>gi|126724612|ref|ZP_01740455.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium HTCC2150]
 gi|126705776|gb|EBA04866.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacterales bacterium HTCC2150]
          Length = 201

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 42/149 (28%), Gaps = 45/149 (30%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E+  +       V   D  T    + I R +  P W    S+         +++P++   
Sbjct: 86  EDESIYKLYPTSVPLTDELTRRGRTSIIRKVVGPSWAPTPSMR--------KRNPEW--- 134

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
                                            PG  N + +  +    +    +H T +
Sbjct: 135 ----------------------------PEFIGPGPDNPLGTHAMYLSWKY-YRIHGTQD 165

Query: 329 PILFNNVVRFETSGCVRV--RNIIDLDVW 355
                   R  ++GC+ +   +I +L   
Sbjct: 166 TRKIG---RKSSNGCIGLFNEHIEELFAL 191


>gi|108757350|ref|YP_633830.1| ErfK/YbiS/YcfS/YnhG family protein [Myxococcus xanthus DK 1622]
 gi|108461230|gb|ABF86415.1| ErfK/YbiS/YcfS/YnhG family protein [Myxococcus xanthus DK 1622]
          Length = 330

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 78/259 (30%), Gaps = 65/259 (25%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-----LDP 153
            + L  G+    ++ ++  L+  G      G       +   A++ FQ+        + P
Sbjct: 94  AQILGPGSQGEGLRAVQATLLDMGFALH-GGADGHHGPHTTRALRNFQVHASRTFPAVLP 152

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           +G +D+STL A++                    L    G R     +P+A     +  +V
Sbjct: 153 TGALDASTLRALDA-------------------LAPAPGTRGQTRGLPSA---FFDGQQV 190

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
                V+V   + +T +  +R   +               D+               I +
Sbjct: 191 ----RVVVALREHRTFLFDTRGQLV---------------DIFPNATGAAASPTRTGIKV 231

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY----MHDTPEP 329
           +          ++D  + E             +      ++    +  +    +H T  P
Sbjct: 232 V--------RTKLDQLATEAAGARLW---NDRHVFGVRMLDLSWADGRHSGEELHGTNAP 280

Query: 330 ILFNNVVRFETSGCVRVRN 348
            L        + GC+R  N
Sbjct: 281 ALLGTD---VSHGCIRHSN 296


>gi|332711167|ref|ZP_08431100.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349981|gb|EGJ29588.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 126

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------L 151
            L  G +  +V+ L++ L     +D    +   F +  E AV+ FQ  +          L
Sbjct: 32  VLKKGTAGEAVRFLQQLLNC--YMDYYLVIDGQFGSQTEQAVRDFQSDYNYQGKSNPDYL 89

Query: 152 DPSGMVDSSTLEAMN 166
              G+V   T  A+ 
Sbjct: 90  IVDGIVGKETYRAIG 104


>gi|284047500|ref|YP_003397839.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
 gi|283951721|gb|ADB46524.1| NLP/P60 protein [Acidaminococcus fermentans DSM 20731]
          Length = 232

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 10/124 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +G+    V+ ++ +L   G   P  G    +   +E  V+ FQ  H L  +G VD
Sbjct: 28  TAPLKVGDKGWKVKTVQIKLNAIGMKTPQTG---KYTRELEGQVRNFQKEHRLPATGKVD 84

Query: 159 SSTLEAMNVPVDL-------RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            +T   +             R   +     R K +     G      +            
Sbjct: 85  DTTYFRIQEAAFEKEGIHGIRGEDVVRTASRYKGVPYSFGGTTPRAFDCSGYVQYVFRQH 144

Query: 212 KVGL 215
           +  L
Sbjct: 145 RAQL 148


>gi|323706377|ref|ZP_08117941.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534271|gb|EGB24058.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 418

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V  L+  L   G    +  +   F     + V  FQ    L   G+V  +T  A
Sbjct: 42  GTYGTDVSELQSILNSIGF--STGAIDGVFGNNTLNGVLAFQKAENLVADGIVGPNTYNA 99

Query: 165 MN 166
           + 
Sbjct: 100 IQ 101


>gi|221638283|ref|YP_002524545.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides KD131]
 gi|221159064|gb|ACM00044.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 262

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 44/189 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  + L  + +R +           ++V+  A  L  V+ G+  LR  + VGR  R  
Sbjct: 58  PAVPPQYLSADKVRREVDYFTDRPPGTIVVDPYARYLYLVQPGQRALRYAIAVGREGR-G 116

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W+  +S+I +                              E+   
Sbjct: 117 FSGEAVIPIKREWPRWIPTKSMIAE----------------------------DPEQYGP 148

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       D G  N + +  +  +   ++  Y +H T +           ++GC+R
Sbjct: 149 WKDG-------MDGGLSNPLGARALYLHRDGKDTYYRIHGTNDVSSIGK---ATSAGCIR 198

Query: 346 V--RNIIDL 352
           +  ++I+DL
Sbjct: 199 LWNQDILDL 207


>gi|126734437|ref|ZP_01750184.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
 gi|126717303|gb|EBA14167.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. CCS2]
          Length = 193

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 46/194 (23%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIV 221
            +   +   +++   +   +        +    VLV+I + +L    E+  V       V
Sbjct: 31  EVEADISASVQRNVASFRSLDWQPYFSNLNKGAVLVDIQSRALHFWSEDQAVYKLFPTSV 90

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              +  T    + I R +  P W    S+          ++P++                
Sbjct: 91  PLSEELTRKGRTAITRKVEGPSWAPTPSMKI--------RNPEW---------------- 126

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                               PG  N + +  +    +    +H T +        R  ++
Sbjct: 127 ---------------PDFIGPGPDNPLGTHALHLSWQY-YRIHGTHDTRKIG---RRSSN 167

Query: 342 GCVRVRNIIDLDVW 355
           GC+ + N   +   
Sbjct: 168 GCIGLYN-EQIAEL 180


>gi|77465087|ref|YP_354590.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126464539|ref|YP_001045652.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332560684|ref|ZP_08415002.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides WS8N]
 gi|77389505|gb|ABA80689.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides 2.4.1]
 gi|126106350|gb|ABN78880.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332274482|gb|EGJ19798.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides WS8N]
          Length = 183

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 46/168 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +G   ++ +  + +L     +G+        V   +  T   ++ I R    P W   
Sbjct: 48  DSLGKGAIVADTTSRALHFWSGDGRDYRIYPTSVPISEELTKRGYTEIVRKKVGPSWTPT 107

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            S +++                                 DW             PG  N 
Sbjct: 108 PSQMERYP-------------------------------DWKPVG---------PGPENP 127

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           + +  +         +H T +        R  + GC+ + N   +   
Sbjct: 128 LGTHAMYLGWPAYI-IHGTHDTRKIG---RPSSDGCIGLYN-EKIAEL 170


>gi|261366638|ref|ZP_05979521.1| penicillin-resistant DD-carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
 gi|282571457|gb|EFB76992.1| penicillin-resistant DD-carboxypeptidase [Subdoligranulum variabile
           DSM 15176]
          Length = 229

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+P +       G+ +  V  L++ L   G   PS  L   F +  ESA+K  Q    L 
Sbjct: 148 GYPTV-----RRGSRNTYVLILQDALNALGY--PSGSLDGVFGSATESALKAIQKDFSLT 200

Query: 153 PSGMVDSSTLEAMN 166
             G+   ++ + + 
Sbjct: 201 ADGVCGCNSWKKIA 214


>gi|160944034|ref|ZP_02091264.1| hypothetical protein FAEPRAM212_01535 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444710|gb|EDP21714.1| hypothetical protein FAEPRAM212_01535 [Faecalibacterium prausnitzii
           M21/2]
          Length = 227

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 9/76 (11%)

Query: 93  GWPE--LPIRPLHLGNSS--VS---VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           GW    L    L  G      +   +  L+  L        +      F     +AVK+F
Sbjct: 146 GWGADLLGSTLLKEGGPHTFPACVWISTLQAHLQSLAY--DTGTADGIFGPKTTAAVKMF 203

Query: 146 QMRHGLDPSGMVDSST 161
           Q   GLD  G V   T
Sbjct: 204 QKYMGLDADGKVGPKT 219


>gi|222147894|ref|YP_002548851.1| hypothetical protein Avi_1186 [Agrobacterium vitis S4]
 gi|221734882|gb|ACM35845.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 254

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 40/182 (21%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            + + ++    +R +           ++V+  A  L  VE     +R  V +G+      
Sbjct: 91  AIPLDRVDKRFLRQEVDYPTTERPGTIVVDTKAHYLYLVEANGRAMRYGVGLGKQGFA-W 149

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
                +      P W    S    +    +RQ         +                  
Sbjct: 150 QGRGVLQFKKTWPRWT--PSDDMVERQPDMRQ--FAAAQGGLE----------------- 188

Query: 290 SPEPPNFIFRQDPGKINAMASTKIE-FYSRNN--TYMHDTPEPILFNNVVRFETSGCVRV 346
                       PG  N + +  +  F +  +    +H TP+           +SGCVR+
Sbjct: 189 ------------PGLRNPLGARALYIFQNGRDTLYRIHGTPDWQSVGK---AVSSGCVRM 233

Query: 347 RN 348
            N
Sbjct: 234 FN 235


>gi|325001255|ref|ZP_08122367.1| hypothetical protein PseP1_20947 [Pseudonocardia sp. P1]
          Length = 332

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 10/106 (9%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           +P +  E      + ++  +   ++  WP      L  G+S   V+  +  L  +G L  
Sbjct: 182 LPRLRNEVAGLLGRRLSRTE--ATKATWPL-----LREGDSGPLVEAAQLLLRDAGTL-- 232

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSSTLEAMNVPVDL 171
                  +D     AV  FQ+ H  +  +G++   +   +   V  
Sbjct: 233 RGDPDGRYDDRTLGAVTEFQVLHRAEDANGLLGGESWPELARTVRA 278


>gi|299768887|ref|YP_003730913.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1]
 gi|298698975|gb|ADI89540.1| hypothetical protein AOLE_03195 [Acinetobacter sp. DR1]
          Length = 167

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GCVR+RN  II+L   + +D   +    
Sbjct: 119 IYIHGTPDTQPMGVPM---SHGCVRMRNEEIIELFDLVAEDALVYLSEQ 164


>gi|153009383|ref|YP_001370598.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561271|gb|ABS14769.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 230

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-VEEVDWNSPEPPNFIFRQDPGKINA 307
           +  ++  +A+ +Q  ++     I+   E  + +   E ++ +      F    D G  N 
Sbjct: 111 TTARRYGIAVGKQGLEFKGTGTINAKREWPRWIPTKEMIERDPAHYGRFKNGMDGGPGNP 170

Query: 308 MASTKIEF--YSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           + S  +     +++    +H T +P    +     ++GC R+   +++DL  
Sbjct: 171 LGSRALYLFQGNKDTYIRIHGTVQPWTIGSS---ASNGCFRMINEDVMDLYE 219


>gi|256395379|ref|YP_003116943.1| NLP/P60 protein [Catenulispora acidiphila DSM 44928]
 gi|256361605|gb|ACU75102.1| NLP/P60 protein [Catenulispora acidiphila DSM 44928]
          Length = 285

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V  L++ L   G       +   F     +AVK +Q  H L   G+V   T  +
Sbjct: 53  GQKSGCVTELQQLLNKHG---AHLAVDGDFGPATRAAVKSYQSSHKLSVDGIVGPKTKAS 109

Query: 165 MN 166
           ++
Sbjct: 110 LD 111


>gi|302875048|ref|YP_003843681.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307690333|ref|ZP_07632779.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302577905|gb|ADL51917.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 449

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR---ERLIISGDLDPSKGLS 131
              T+  +   + ++  G     P   L +G+S   V+ ++    R+ ++    P   ++
Sbjct: 312 YYGTDINLVRAEKVV--GIPQSFPGYALRIGSSGQPVRTVQTFLNRIAVNFPAIPKLAVT 369

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK 184
             +DA   ++VK FQ    L  SG+VD +T  A++       +  ++    ++
Sbjct: 370 GVYDAKTATSVKKFQEVFKLSQSGIVDYATWFAISRLYVAVTKIAELREEDLR 422


>gi|126461297|ref|YP_001042411.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126102961|gb|ABN75639.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 260

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 44/189 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  + L  + +R +           ++V+  A  L  V+ G+  LR  + VGR  R  
Sbjct: 56  PAVPPQYLSADKVRREVDYFTDQPPGTIVVDPYARYLYLVQPGQRALRYAIAVGREGR-G 114

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W+  +S+I +                              E+   
Sbjct: 115 FSGEAVIPIKREWPRWIPTKSMIAE----------------------------DPEQYGP 146

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       D G  N + +  +  +   ++  Y +H T +           ++GC+R
Sbjct: 147 WKDG-------MDGGLSNPLGARALYLHRDGKDTYYRIHGTNDVSSIGK---ATSAGCIR 196

Query: 346 V--RNIIDL 352
           +  ++I+DL
Sbjct: 197 LWNQDILDL 205


>gi|291525690|emb|CBK91277.1| Putative peptidoglycan-binding domain-containing protein
           [Eubacterium rectale DSM 17629]
          Length = 420

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   + +G+S  +V +++++L  I       PS      +    ++AV+ FQ   GL  S
Sbjct: 336 PGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFGLPVS 395

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 396 GVVDYNTWYEIS 407


>gi|197122202|ref|YP_002134153.1| peptidoglycan-binding protein [Anaeromyxobacter sp. K]
 gi|196172051|gb|ACG73024.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter sp. K]
          Length = 136

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 9/83 (10%)

Query: 91  RGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           RG  P +P  P   L  G        LR+R    G L          D    +A++ FQ 
Sbjct: 47  RGERPRVPSSPEALLAPGAVGEIQDALRDR----GYL--GAHRRGELDRATSAALRRFQE 100

Query: 148 RHGLDPSGMVDSSTLEAMNVPVD 170
             GL  +G  D  TL  ++V   
Sbjct: 101 AQGLAATGAPDRETLRRLHVDPA 123


>gi|194014667|ref|ZP_03053284.1| N-acetylmuramoyl-L-alanine amidase XlyA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
 gi|194013693|gb|EDW23258.1| N-acetylmuramoyl-L-alanine amidase XlyA (Cellwall hydrolase)
           (Autolysin) [Bacillus pumilus ATCC 7061]
          Length = 299

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 9/90 (10%)

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKG 129
           Q  + +  Y++        ELP   L           V+ +++ L            +KG
Sbjct: 200 QIGQVLKIYRNDAKSLY--ELPNGVLKVTSPLTKGEHVRLVQQALAAVYFYPDKAAANKG 257

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +   +     +AV  FQ+ +GL   G+   
Sbjct: 258 IDGVYGEKTANAVARFQLVNGLTSDGVYGP 287


>gi|297539081|ref|YP_003674850.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
 gi|297258428|gb|ADI30273.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera sp. 301]
          Length = 159

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
            N + +       +   Y+H TP+           + GCVR+ N    +L  W+
Sbjct: 102 KNRLGNVDTM---QRYIYIHGTPDSTELGK---IGSHGCVRMHNAEVIELFDWI 149


>gi|224824537|ref|ZP_03697644.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224603030|gb|EEG09206.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 163

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 9/68 (13%)

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKD 359
           PG  N +         R   Y+H TP+ +      R  + GCVR+RN    +L   L   
Sbjct: 100 PG-RNRLGPVDTM---RRYIYLHGTPDQVELG---RPGSHGCVRMRNSDIIELFELLPCG 152

Query: 360 TPTWSRYH 367
           T      H
Sbjct: 153 TEVEIVEH 160


>gi|53804647|ref|YP_113750.1| N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding
           domain-containing protein [Methylococcus capsulatus str.
           Bath]
 gi|53758408|gb|AAU92699.1| N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding
           domain protein [Methylococcus capsulatus str. Bath]
          Length = 617

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLS---VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +  +V  +++ L   G +     LS     F +   +AV+ FQ   GL  SG VD +TL 
Sbjct: 291 TGDAVGAIQDLLSGHGHIGLPCLLSAAYGRFGSKTAAAVQDFQTGQGLSASGEVDVATLR 350

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLL 187
           A+      + R  QV L  +  L 
Sbjct: 351 ALVRTPAAKPRISQVYLELVLGLP 374


>gi|296448110|ref|ZP_06890011.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296254375|gb|EFH01501.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 249

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 6/62 (9%)

Query: 294 PNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNII 350
           P+     D G  N + +  +     +++  + +H T EP    +     +SGC+R+ N  
Sbjct: 176 PDLPPHMDGGLENPLGARALYLFQGNKDTLFRIHGTNEPQSIGH---AVSSGCIRMLNAD 232

Query: 351 DL 352
            +
Sbjct: 233 VI 234


>gi|257057487|ref|YP_003135319.1| negative regulator of beta-lactamase expression [Saccharomonospora
           viridis DSM 43017]
 gi|256587359|gb|ACU98492.1| negative regulator of beta-lactamase expression [Saccharomonospora
           viridis DSM 43017]
          Length = 311

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 17/52 (32%), Gaps = 3/52 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           L  G+ S  V   + RL   G           FD     AV  F   +GL  
Sbjct: 237 LRPGDRSEDVLLAQRRLRAHGY---DVPAHGVFDQATREAVAAFAASNGLAQ 285


>gi|291528185|emb|CBK93771.1| Putative peptidoglycan-binding domain-containing protein
           [Eubacterium rectale M104/1]
          Length = 420

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   + +G+S  +V +++++L  I       PS      +    ++AV+ FQ   GL  S
Sbjct: 336 PGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFGLPVS 395

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 396 GVVDYNTWYEIS 407


>gi|239997099|ref|ZP_04717623.1| hypothetical protein AmacA2_21857 [Alteromonas macleodii ATCC
           27126]
          Length = 39

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query: 388 VHFVYISAWSPKDSIIQFRDDIYGLDNVHVGII 420
           V  VY +A++ +   I FR D Y  D+  +  +
Sbjct: 1   VLIVYFTAFADEAGTIVFRRDAYNRDSYIIEKL 33


>gi|221369085|ref|YP_002520181.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|221162137|gb|ACM03108.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 183

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 44/168 (26%), Gaps = 46/168 (27%)

Query: 189 QKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             +G   ++ +  + +L     +G+        V   +  T   ++ I R    P W   
Sbjct: 48  DSLGKGAIVADTTSRALHFWSGDGRDYRIYPTSVPISEELTKRGYTEIVRKKVGPSWTPT 107

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
            S +++                                 DW             PG  N 
Sbjct: 108 PSQMERYP-------------------------------DWKPIG---------PGPENP 127

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           + +  +         +H T +        R  + GC+ + N   +   
Sbjct: 128 LGTHAMYLGWPAYI-IHGTHDTRKIG---RPSSDGCIGLYN-EKIAEL 170


>gi|320104360|ref|YP_004179951.1| hypothetical protein Isop_2836 [Isosphaera pallida ATCC 43644]
 gi|319751642|gb|ADV63402.1| protein of unknown function DUF1028 [Isosphaera pallida ATCC 43644]
          Length = 391

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 48/175 (27%), Gaps = 41/175 (23%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP 98
           ++ +   +  +        +V             E I +  +    Y  I    G+    
Sbjct: 216 LVADPRRTHPDGSHLTVNLQVAE---------HPEPIDELRR---QYDTITHNLGYRTFA 263

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPS-----------KGLSVAFDAYVESAVKLFQM 147
           +           V +L+  L   GD  P                  +D     AV  F+ 
Sbjct: 264 LI------QGPDVVQLKRALHELGDYRPDEQEADFNRGLRSSEGGVYDRETAQAVDRFRA 317

Query: 148 RHGLD--------PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           R GL           G+VD   + A+       I QL+      K    ++   R
Sbjct: 318 RVGLPHPGLGLGYAPGVVDREMIRAL----QDAITQLRRAQRAQKSDSPEQPPPR 368


>gi|298527700|ref|ZP_07015104.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511352|gb|EFI35254.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 507

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 94  W-PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W PE+ ++  +    S  +Q+++ERL   G             +    A+  FQ  + L+
Sbjct: 431 WRPEVIVQEFYPDLRSQEIQKIQERLSDLGYY--RNITDGYLGSATWHALMDFQAAYDLE 488

Query: 153 PSGMVDSSTLEAMNVPVDL 171
            SG     T+  +    D 
Sbjct: 489 TSGTPTPETIFWLFSGADP 507


>gi|209523573|ref|ZP_03272127.1| glycoside hydrolase family 25 [Arthrospira maxima CS-328]
 gi|209495978|gb|EDZ96279.1| glycoside hydrolase family 25 [Arthrospira maxima CS-328]
          Length = 448

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVD 158
             +  G     V+ ++  L   G       +   F A  E AV  FQ   G+   +G+  
Sbjct: 189 ESIRRGERGPKVELMQTMLKKRGF--EPGVIDGIFGAGTERAVISFQDNKGIKEKNGVAG 246

Query: 159 SSTLEAMNVPVD 170
             T  A+   V+
Sbjct: 247 LKTWTALMGQVE 258


>gi|170751155|ref|YP_001757415.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170657677|gb|ACB26732.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 267

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 51/200 (25%), Gaps = 49/200 (24%)

Query: 159 SSTLEAMNVPVDLRIRQLQVNLM-------RIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            S L         R      ++        R +    +      V+V+     L  V   
Sbjct: 58  PSFLAMYAAKPAERFPLPATDISAVDPRYFRQEVAYPRSEPPGTVVVDPGNKFLYLVREN 117

Query: 212 KVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI 271
              LR  V VG+         + I R    P W     +I+++                 
Sbjct: 118 GRALRYGVGVGKAG-LAWNGTAEIKRKAEWPRWTPTADMIRREP---------------- 160

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPE 328
                                   +     PG  N +    +  +  +      +H T E
Sbjct: 161 -------------------ERNGPWRNGMAPGLTNPLGPRALYLFDGDRDTLYRIHGTTE 201

Query: 329 PILFNNVVRFETSGCVRVRN 348
           P          +SGC+R+ N
Sbjct: 202 PQTIGTN---VSSGCIRMFN 218


>gi|170740929|ref|YP_001769584.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
 gi|168195203|gb|ACA17150.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium sp. 4-46]
          Length = 219

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 50/179 (27%), Gaps = 47/179 (26%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
             R             ++V+I    L  V++G   +R  V VG++         +     
Sbjct: 65  YRRQVVAYAGPEKPGTIVVDIDERLLYLVQDGGEAIRYGVGVGKLG-----FSWKGT--- 116

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
                    +I +K +                                      P+    
Sbjct: 117 --------ATIGRKGVWP------------------------DWGPTRTMVGLNPDLPRS 144

Query: 300 QDPGKINAMASTKIEFY-SRNNTY--MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +  G  N + +  +  Y    +    +H T EP      +   +SGCVR+ N  D+   
Sbjct: 145 RKGGLDNPLGARALYLYQGGRDILFRIHGTNEPWSIGEQM---SSGCVRMLN-EDIVDL 199


>gi|66808293|ref|XP_637869.1| hypothetical protein DDB_G0286137 [Dictyostelium discoideum AX4]
 gi|60466300|gb|EAL64361.1| hypothetical protein DDB_G0286137 [Dictyostelium discoideum AX4]
          Length = 1009

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L    +  +V  L   L   G LD         + +  ESA++ FQ  + +  +G+ D S
Sbjct: 430 LKSSTTGDAVSLLNYSLYSIGYLDEYNHSTREIYTSITESAIRKFQEDNNIPMTGVADFS 489

Query: 161 TLE 163
           T+ 
Sbjct: 490 TIR 492


>gi|77462420|ref|YP_351924.1| hypothetical protein RSP_1873 [Rhodobacter sphaeroides 2.4.1]
 gi|77386838|gb|ABA78023.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 293

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 44/189 (23%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +  + L  + +R +           ++V+  A  L  V+ G+  LR  + VGR  R  
Sbjct: 89  PAVPPQYLSADKVRREVDYFTDQPPGTIVVDPYARYLYLVQPGQRALRYAIAVGREGR-G 147

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W+  +S+I +                              E+   
Sbjct: 148 FSGEAVIPIKREWPRWIPTKSMIAE----------------------------DPEQYGP 179

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       D G  N + +  +  +   ++  Y +H T +           ++GC+R
Sbjct: 180 WKDG-------MDGGLSNPLGARALYLHRDGKDTYYRIHGTNDVSSIGK---ATSAGCIR 229

Query: 346 V--RNIIDL 352
           +  ++I+DL
Sbjct: 230 LWNQDILDL 238


>gi|28210382|ref|NP_781326.1| hypothetical protein CTC00656 [Clostridium tetani E88]
 gi|28202819|gb|AAO35263.1| conserved protein (peptidoglycan binding) [Clostridium tetani E88]
          Length = 232

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 12/84 (14%)

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN-TYMHDTPEPILFNN 334
             GK               +  +       +   +  +          +H T +P+  NN
Sbjct: 68  AGGKPETPSPYGTWKITSKSANW------GSGFGTRWMGLNVPWGQYGIHGTNKPLSINN 121

Query: 335 VVRFETSGCVRVRN--IIDLDVWL 356
                + GC+R+ N  + +L  ++
Sbjct: 122 PD---SKGCIRMFNKDVEELYKYV 142



 Score = 44.3 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           R L  G+    V  ++  L   G       L   +   ++S +  F+  + L  S  +D 
Sbjct: 163 RTLKPGDKGADVLEVQRVLKYRGYYA--GKLDGIYGEGMKSIILKFKTDNNLSFSHYIDG 220

Query: 160 STLEAMNVPV 169
                + +  
Sbjct: 221 EMYNKLGMQP 230


>gi|119385308|ref|YP_916364.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
 gi|119375075|gb|ABL70668.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
          Length = 217

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 57/204 (27%), Gaps = 49/204 (24%)

Query: 150 GLDPSGMVDSSTLEAMNVPVDL----RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           G    G    +T +A  V  D     R       +   +      +    +LV++ + +L
Sbjct: 39  GQPLQGTAGGATPDAGMVQYDSGQDSRRNISSFRMQDWQPYF-GTLANGAILVDLTSRAL 97

Query: 206 EAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
               E+  V       V      T    + I + +  P W     +         +++P+
Sbjct: 98  HFWSEDQSVYRLFPTSVPVSADLTRTGRTEIIKKVVGPSWAPTPEMK--------KRNPE 149

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           +                                    PG  N + +  +    +    +H
Sbjct: 150 W-------------------------------PDFVPPGPDNPLGTHALWLSWQY-YRIH 177

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GC+ + N
Sbjct: 178 GTHDTRKIG---RKSSNGCIGLYN 198


>gi|255263797|ref|ZP_05343139.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62]
 gi|255106132|gb|EET48806.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62]
          Length = 189

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 16/109 (14%)

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ-----DPGKINAMASTKIEFYS 317
           P   +     +     KE        +  +     ++Q       G  N + +  +  + 
Sbjct: 78  PGLYESGEFTV--GAKKEWPSWTPTPDMIKRNPAAYKQHENGMPGGPNNPLGARALYLFQ 135

Query: 318 RNN----TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
                    +H T  P          ++GC R+ N    DL   +   T
Sbjct: 136 PGRGDTFLRIHGTNAPRTIGT---AVSNGCARLTNAHIGDLYERVPLGT 181


>gi|154245021|ref|YP_001415979.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154159106|gb|ABS66322.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 225

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
             G+ N + +  +      ++  Y +H T EP          +SGC+R+  +++IDL   
Sbjct: 157 AGGETNPLGARALYLFKDGKDTLYRIHGTNEPWTIGE---AVSSGCIRMMNQDVIDLYRR 213

Query: 356 LLKDTP 361
           +   T 
Sbjct: 214 VPNGTK 219


>gi|291005214|ref|ZP_06563187.1| hypothetical protein SeryN2_11892 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 131

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 6/82 (7%)

Query: 87  DILSRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I+    W  LP       L  G++   V  L+  L     +         F    ++ V
Sbjct: 31  GIVGPLSWQALPSGSAMPVLQEGSTGGVVWDLQRTLNTL--IVAGLVQDGIFGPLTKAKV 88

Query: 143 KLFQMRHGLDPSGMVDSSTLEA 164
             FQ    + P G+V   T  A
Sbjct: 89  VQFQQISSIAPDGIVGDRTWRA 110


>gi|238923688|ref|YP_002937204.1| hypothetical protein EUBREC_1310 [Eubacterium rectale ATCC 33656]
 gi|238875363|gb|ACR75070.1| Hypothetical protein EUBREC_1310 [Eubacterium rectale ATCC 33656]
          Length = 128

 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   + +G+S  +V +++++L  I       PS      +    ++AV+ FQ   GL  S
Sbjct: 44  PGYNIGIGSSGQNVYQIQKQLARIAKAYPAIPSIVPDGIYGPKTKAAVEKFQAVFGLPVS 103

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 104 GVVDYNTWYEIS 115


>gi|154252852|ref|YP_001413676.1| N-acetylmuramoyl-L-alanine amidase [Parvibaculum lavamentivorans
           DS-1]
 gi|154156802|gb|ABS64019.1| N-acetylmuramoyl-L-alanine amidase family 2 [Parvibaculum
           lavamentivorans DS-1]
          Length = 247

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 20/133 (15%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP------- 98
                +     A + + I S  PI ++  +A ++ A A   D      W  L        
Sbjct: 105 PYPEAQMKAVEA-LSLEILSRHPIQARRVLAHSDIAPARKADPGEWFDWARLARAGVGVW 163

Query: 99  --------IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
                      L  G+   +V  L+  L   G       +   +D   ++ V  FQ    
Sbjct: 164 VEPEPVGEGPVLREGDRGDTVAELQYLLADYGY---GLEVLGRYDEATKAVVTAFQRHFR 220

Query: 151 -LDPSGMVDSSTL 162
                G+ D ST+
Sbjct: 221 PQKVDGVADVSTV 233


>gi|83942058|ref|ZP_00954520.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
 gi|83847878|gb|EAP85753.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. EE-36]
          Length = 201

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 57/209 (27%), Gaps = 48/209 (22%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVG 214
           V+S         +   +R+   +   +             +LV+I + ++    E+  + 
Sbjct: 32  VNSEATTETERDLTETVRRNTSSFRTLDWQPYFSDTKNGAILVDIDSRAVHYWSEDQSIY 91

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
                 V   +  T    + + + +  P W    S+        L ++P++         
Sbjct: 92  KLYPSSVPLTEELTRRGRTSVIQKVVGPTWRPTPSM--------LERNPEW--------- 134

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFN 333
                                      PG  N + +  +        Y +H T +     
Sbjct: 135 ----------------------PAVIGPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG 170

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
              R  ++GC+ + N   +          
Sbjct: 171 ---RRSSNGCIGLYN-EHIAELFAMANVG 195


>gi|297159984|gb|ADI09696.1| Peptidoglycan-binding domain 1 protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 379

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 15/151 (9%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +  Y+++ +       P RPL      + V++    L + G       ++  +      A
Sbjct: 112 LPMYRELAAGRD----PDRPLR----GLDVKQFESNLAMLGY--SGFTVNDTYSQLTADA 161

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           VK +Q   G   +G V +  +  ++ P+ +    ++V       +L      R V V+ P
Sbjct: 162 VKRWQRDLGRPRTGKVGTGDIAYVSGPIRIARTSVRVGAQATGNVLSYTSTARSVTVDAP 221

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           A      E G       V V   D  T    
Sbjct: 222 AGETGWAERGN-----RVTVELPDGHTVKGR 247


>gi|86148794|ref|ZP_01067062.1| putative general secretion pathway protein A [Vibrio sp. MED222]
 gi|85833413|gb|EAQ51603.1| putative general secretion pathway protein A [Vibrio sp. MED222]
          Length = 562

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +     L  G    +V  L    ++S  L      S  FD  ++  ++ FQ   G+  
Sbjct: 474 WKQPLRETLKEGYQGEAVALLDL--LLSEVLGEDVSGSDVFDYELKMKIEAFQTWQGMSV 531

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL 176
            G+    TL  +      R+ QL
Sbjct: 532 DGIAGKRTLARL-----QRLAQL 549


>gi|300727563|ref|ZP_07060953.1| putative peptidoglycan binding domain protein [Prevotella bryantii
           B14]
 gi|299775152|gb|EFI71754.1| putative peptidoglycan binding domain protein [Prevotella bryantii
           B14]
          Length = 274

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 16/81 (19%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS----------VAFDAYVESAVKLF 145
            +  R L  G     V  L      +G L     ++            +DA + SAVK F
Sbjct: 132 SIGDRTLKTGIHGSDVTAL------TGYLATGLYINHSWIKEKEGYSLYDATIASAVKHF 185

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q   GL  +G+ D +T++ + 
Sbjct: 186 QKDAGLAQTGIADQTTIDKLK 206


>gi|228943445|ref|ZP_04105889.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228976300|ref|ZP_04136771.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228783404|gb|EEM31512.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228816225|gb|EEM62406.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 595

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGL 151
              P   +  G+   SV+ +++ L        +     +S  FD+   +AVK+FQ    +
Sbjct: 372 KSFPGYNIKEGDQKGSVRTIQKYLFQIRKKYSNLPEIIISGTFDSNTVNAVKIFQRNFQI 431

Query: 152 DPSGMVDSSTLEAMN 166
             +G+VD  T   +N
Sbjct: 432 PDNGIVDELTWNKLN 446



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+   SV+ ++  L   G       +   F    E +VK FQ       +G+V    
Sbjct: 462 LQNGSQGESVKMIQSLLKRFGFYTGE--IDGFFGLGTEKSVKEFQKIKSFTVTGVVRKEL 519

Query: 162 LE 163
             
Sbjct: 520 WR 521


>gi|41057064|ref|NP_957546.1| hypothetical protein pCD6_p4 [Clostridium difficile]
 gi|38196035|gb|AAR13708.1| unknown [Clostridium difficile]
          Length = 186

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
               ND      + +     S+I + S  + + T      Y  +     +       +  
Sbjct: 64  EPQPNDEIFITPSELKTY--SNIDMYSARSSSFTVTYHYSYYKVTGDKNYTVNTSTIVKY 121

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           GNS   V  ++  L   G    +  +   F     S VK FQ  +GL   G+V S+T + 
Sbjct: 122 GNSGNPVHLVQLLLKKVGY---ALEVDSQFGNTTLSKVKSFQGSYGLTVDGIVGSATWKK 178

Query: 165 MN 166
             
Sbjct: 179 FA 180


>gi|172056176|ref|YP_001812636.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Exiguobacterium sibiricum 255-15]
 gi|171988697|gb|ACB59619.1| peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
           [Exiguobacterium sibiricum 255-15]
          Length = 210

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             ++  FDA     V+ +Q R GL   G+V  +T   M
Sbjct: 172 ATVTKRFDAETAEKVRAYQKRQGLTVDGVVGPATWNRM 209


>gi|296454225|ref|YP_003661368.1| hypothetical protein BLJ_1081 [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183656|gb|ADH00538.1| hypothetical protein BLJ_1081 [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 372

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 68/235 (28%), Gaps = 20/235 (8%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET-----IAQTEK 80
           L  + +   VL+           +D  D   A   +   + +P+  K+      + + + 
Sbjct: 61  LRTQEVTKGVLNAETRLGASLQYDDASDFAAASGTI---TQLPVAGKQINTGEQVYEMDG 117

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           A         R  W  +        +    V +L + L   G       +   F+     
Sbjct: 118 APVPL-FHGDRPFWRTIGDGV----SDGPDVTQLEQNLQELGFY--GGEVGPHFNWLTRE 170

Query: 141 AVKLFQMRHGLDPS---GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-YV 196
           A++ +Q   GL      G  D +T+        +RI  +   L + +       G+  + 
Sbjct: 171 AIRQWQRSLGLTGDAVTGTFDPNTVALAAAAP-IRITAVNAKLGQSQVSPASYTGVTLHA 229

Query: 197 LVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
              + A      + G            V+     +     +   N     P + I
Sbjct: 230 QATLTATQAAMFKAGDKAQVVLPDNTTVETTLASVDQGGQKTGDNGQATQPSARI 284


>gi|302346982|ref|YP_003815280.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
 gi|302151113|gb|ADK97374.1| putative lipoprotein [Prevotella melaninogenica ATCC 25845]
          Length = 514

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 55/173 (31%), Gaps = 17/173 (9%)

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE---VFVEEVDWNS 290
            +   + +    +  +I +        ++  Y    +I++ D  G +      ++  WN 
Sbjct: 261 TVRYWIKDYVTNVEGAITKTYDSFKYEKNDYYDMTADINVTDYDGSKYYMWDAQKNYWNG 320

Query: 291 PEPPNFIFRQD--PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            E  +    Q     K N        +    ++Y H T     F       +S C  + N
Sbjct: 321 HEWNSANPWQPVLANKSNP------NYPVSGSSYFHRT---GGFGREDAMNSS-CKNLPN 370

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDS 401
             +L  ++    P W    +   +       + L  +   +   I++++    
Sbjct: 371 ANELGWYVKNGDPRWDDDKLWTAMGHLYKGGIWLRNK--AYINLITSFNSDQG 421


>gi|242073696|ref|XP_002446784.1| hypothetical protein SORBIDRAFT_06g022520 [Sorghum bicolor]
 gi|241937967|gb|EES11112.1| hypothetical protein SORBIDRAFT_06g022520 [Sorghum bicolor]
          Length = 367

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G     V+ ++E L+  G     + +   +F +  E AVK +Q   G   +G++ 
Sbjct: 162 RTLRAGAEGEDVRAMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQSTVGTSENGVMT 221

Query: 159 SSTLEAM 165
           S  LE +
Sbjct: 222 SELLEWL 228


>gi|218437745|ref|YP_002376074.1| peptidoglycan-binding protein [Cyanothece sp. PCC 7424]
 gi|218170473|gb|ACK69206.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7424]
          Length = 531

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 8/87 (9%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    R L  G+    V+ ++  L        +      F+   ++AVK FQ + GL   
Sbjct: 283 PMTLTRILRWGDKGDDVKAVQCALNRFN--CNAGAEDGEFEDQTQAAVKAFQFKAGLLVD 340

Query: 155 GMVDSSTLEAMN------VPVDLRIRQ 175
           G V   T E +       VP D  +  
Sbjct: 341 GEVGPLTAEKLGFKVTVIVPPDQPLHL 367


>gi|23098711|ref|NP_692177.1| hypothetical protein OB1256 [Oceanobacillus iheyensis HTE831]
 gi|22776938|dbj|BAC13212.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
          Length = 245

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L   +  + V+ ++ +L   G       +   F +  E  V  FQ +H L   G+V   
Sbjct: 59  TLKEDSVGLEVELVQVKLNHFGF---ETDVDGIFGSKTEKQVMNFQKKHDLIIDGIVGEE 115

Query: 161 TLEAM 165
           T  A+
Sbjct: 116 TWIAL 120


>gi|332800388|ref|YP_004461887.1| peptidoglycan-binding domain 1 protein [Tepidanaerobacter sp. Re1]
 gi|332698123|gb|AEE92580.1| Peptidoglycan-binding domain 1 protein [Tepidanaerobacter sp. Re1]
          Length = 413

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P++          V+ L++ L   G    +  +   F      AV+ FQ    +  +G+V
Sbjct: 12  PLKKQKPLLKGSDVRHLQQVLKRLG--VFNARIDGVFGYETMQAVREFQRAFHIKQNGIV 69

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           D    E +          ++  + + + +        Y  V IP
Sbjct: 70  DDDEFEILK-------ELMRCGINKWRTIQRDYRHSGYSPVPIP 106


>gi|15644434|ref|NP_229486.1| hypothetical protein TM1686 [Thermotoga maritima MSB8]
 gi|4982262|gb|AAD36753.1|AE001809_5 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 395

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 11/70 (15%)

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KE+      +     P           N + +  ++        +H T +P         
Sbjct: 307 KEIDPALYWFGEYISPRTPL-------NGLGTRYLQLSDP-TYAIHGTSKPWEIGKR--- 355

Query: 339 ETSGCVRVRN 348
            + GC+R+ N
Sbjct: 356 ISHGCIRMFN 365


>gi|134299346|ref|YP_001112842.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
 gi|134052046|gb|ABO50017.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfotomaculum reducens MI-1]
          Length = 255

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 28/156 (17%)

Query: 230 ILHSRINRIMFNP---YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI---DEKGKEVFV 283
            ++S +  +  N             +K ++   + +  YL D    +       GKE   
Sbjct: 100 KMNSYLLNLQPNTKLLVSYPNPYDKKKMIIISKKNNLLYLYDQGYLVKIYPVATGKEKLF 159

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMASTKIEF----------------YSRNNTYMHDTP 327
                          +      N      +                     +   +H T 
Sbjct: 160 TPEGSFKI-ANKLPIKNADDPENLYGPRWMGLAVPDEKDKRANNDKRAPVGHKYGIHGTN 218

Query: 328 EPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
           EP          + GC+R+ N  I++L   +  +T 
Sbjct: 219 EPNSIGT---HASGGCIRLNNHDILELYDMVPINTK 251


>gi|331269415|ref|YP_004395907.1| N-acetylmuramoyl-L-alanine amidase-like protein [Clostridium
           botulinum BKT015925]
 gi|329125965|gb|AEB75910.1| N-acetylmuramoyl-L-alanine amidase-like protein [Clostridium
           botulinum BKT015925]
          Length = 272

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + +++ LI              F     +++K FQ    L   G+V  +T 
Sbjct: 210 KQGARGNITKIIQKILINKNY---KIQADGIFGEATVNSIKHFQGNKNLVQDGVVGKNTW 266

Query: 163 EAM 165
           +A+
Sbjct: 267 KAL 269


>gi|84503194|ref|ZP_01001279.1| hypothetical protein OB2597_16567 [Oceanicola batsensis HTCC2597]
 gi|84686760|ref|ZP_01014647.1| hypothetical protein 1099457000266_RB2654_22323 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|114762609|ref|ZP_01442053.1| hypothetical protein 1100011001314_R2601_07153 [Pelagibaca
           bermudensis HTCC2601]
 gi|159046149|ref|YP_001541821.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|159046484|ref|YP_001542154.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|84388435|gb|EAQ01384.1| hypothetical protein OB2597_16567 [Oceanicola batsensis HTCC2597]
 gi|84665191|gb|EAQ11670.1| hypothetical protein RB2654_22323 [Rhodobacterales bacterium
           HTCC2654]
 gi|114544864|gb|EAU47869.1| hypothetical protein R2601_07153 [Roseovarius sp. HTCC2601]
 gi|157913908|gb|ABV95340.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157914243|gb|ABV95673.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 221

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 42/170 (24%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
            +  + L +  +    + V+  A  L  +E G   +R  V + R     P     I R +
Sbjct: 60  FLPQRVLAKDGLVPGDIHVDAVARYLYHIEEGGTAMRYGVAIARGKLYEP-GTYTIKRKV 118

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P+W   +++I         +DP+   D    + D                        
Sbjct: 119 RWPHWQPTQNMI--------DRDPELYAD----IADG----------------------- 143

Query: 300 QDPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV 346
            +PG  NA+ S  +  F    +TY  +H TP P       R  +SGCVR+
Sbjct: 144 MEPGPENALGSRALYLFVGDRDTYLRIHGTPYPRSIG--GRA-SSGCVRM 190


>gi|328553819|gb|AEB24311.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens TA208]
 gi|328911326|gb|AEB62922.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens LL3]
          Length = 292

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +     +AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAANNGIDGIYGPKTANAVARFQSVNGLPSDGIYG 281

Query: 159 SSTLEAM 165
            +    +
Sbjct: 282 PAVKAKI 288


>gi|134103030|ref|YP_001108691.1| hypothetical protein SACE_6599 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133915653|emb|CAM05766.1| hypothetical protein SACE_6599 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 135

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 27/82 (32%), Gaps = 6/82 (7%)

Query: 87  DILSRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I+    W  LP       L  G++   V  L+  L     +         F    ++ V
Sbjct: 35  GIVGPLSWQALPSGSAMPVLQEGSTGGVVWDLQRTLNTL--IVAGLVQDGIFGPLTKAKV 92

Query: 143 KLFQMRHGLDPSGMVDSSTLEA 164
             FQ    + P G+V   T  A
Sbjct: 93  VQFQQISSIAPDGIVGDRTWRA 114


>gi|262371780|ref|ZP_06065059.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
 gi|262311805|gb|EEY92890.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter junii SH205]
          Length = 167

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TPE       +   + GC+R++N  I++L   + +  
Sbjct: 118 IYIHGTPESQPMGIPM---SHGCIRMQNDEILELFELVPEQA 156


>gi|303290915|ref|XP_003064744.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453770|gb|EEH51078.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 130

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 84  FYQDILSRGG-WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESA 141
            Y  I   G  WP      L L +  + V +L+  L   G     + +    F +  E+A
Sbjct: 3   NYPQIAGEGKRWP-----VLRLDDGGLEVHKLQVLLDDLGYYSGEEDMQYWYFGSTTENA 57

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           +  FQ   GL  +G+   +T  A+    DL++
Sbjct: 58  LGTFQASTGLPDTGLTCVNTWRALVGEEDLKL 89


>gi|148270116|ref|YP_001244576.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
 gi|147735660|gb|ABQ47000.1| ErfK/YbiS/YcfS/YnhG family protein [Thermotoga petrophila RKU-1]
          Length = 382

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 22/70 (31%), Gaps = 11/70 (15%)

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
           KE+      +     P           N + +  ++        +H T +P         
Sbjct: 294 KEIDPALYWFGEYISPRTPL-------NGLGTRYLQLSDP-TYAIHGTSKPWEIGKR--- 342

Query: 339 ETSGCVRVRN 348
            + GC+R+ N
Sbjct: 343 ISHGCIRMFN 352


>gi|254437710|ref|ZP_05051204.1| ErfK/YbiS/YcfS/YnhG superfamily [Octadecabacter antarcticus 307]
 gi|198253156|gb|EDY77470.1| ErfK/YbiS/YcfS/YnhG superfamily [Octadecabacter antarcticus 307]
          Length = 180

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 50/200 (25%), Gaps = 46/200 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           + V       +   +            +G   +L +I + +L    +          V  
Sbjct: 19  LVVNAQEAPDRNSSSFAAQDWQDHFSTLGNGAILADITSRALHYWGSDGSYRLYPSSVPM 78

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKD-MMALLRQDPQYLKDNNIHMIDEKGKEVF 282
            +  T   +S I R    P W   +S+ ++D  +  + +  +                  
Sbjct: 79  SEELTRRGYSEIVRKRVGPTWTPTQSMRERDPTLPQMMESGE------------------ 120

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
                                  N + +  +         +H T +        R  +SG
Sbjct: 121 ---------------------PGNPLGTHAMYLDWP-AYLIHGTHDTRKIG---RQSSSG 155

Query: 343 CVRVRNIIDLDVWLLKDTPT 362
           C+ + N   +          
Sbjct: 156 CIGLYN-DHIAELFAVVQTG 174


>gi|56965746|ref|YP_177480.1| hypothetical protein ABC3988 [Bacillus clausii KSM-K16]
 gi|56911992|dbj|BAD66519.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 432

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 111 VQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           ++ ++++LI       P+ G+   +       V+ FQ R GL   G+    TL  +   +
Sbjct: 17  IKMVQKQLIRENPSALPNYGVDGHYGPETTDWVQRFQERKGLQVDGVAGPETLRRLRADI 76

Query: 170 DLRIRQ 175
             R   
Sbjct: 77  VQRPDS 82



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+R++ +L      D S  +  +F    +SAV+ FQ        G+    T+  
Sbjct: 151 GDTGSLVRRIQHQLNEQDRADISIEVDGSFGPATKSAVEAFQEATEQRVDGIAGPVTMNL 210

Query: 165 MNVPVDLRIR 174
           ++      I 
Sbjct: 211 LDFQAYQPIE 220



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +S   V+ L+E L           +   +       V+ FQ  + L   G+   +TL
Sbjct: 79  RPDSSGNGVEILQEDL--LFFYIQQSTVDGNYGPGTTQGVRDFQFLNNLVVDGIAGPNTL 136

Query: 163 EAMN 166
           + M+
Sbjct: 137 KKMD 140


>gi|118588451|ref|ZP_01545860.1| hypothetical protein SIAM614_24257 [Stappia aggregata IAM 12614]
 gi|118439157|gb|EAV45789.1| hypothetical protein SIAM614_24257 [Stappia aggregata IAM 12614]
          Length = 214

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 9/130 (6%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P     ++      YWV   +   +  + + R+  Q+     I       + V     + 
Sbjct: 70  PPGTVVVDTNNHFLYWVWENNTALRYGVGVGREGFQWFGRARIDRKALWPRWVPPP--EM 127

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVR 345
              +P      +     N +    +  Y         +H T EP       R  +SGC+R
Sbjct: 128 LKRQPDLPRLVEGGATNNPLGPRAMYLYRDGTDLGYRLHGTLEPWSIG---RDVSSGCIR 184

Query: 346 VRNIIDLDVW 355
           +    D+   
Sbjct: 185 MF-PEDIVDL 193


>gi|84516878|ref|ZP_01004236.1| hypothetical protein SKA53_06862 [Loktanella vestfoldensis SKA53]
 gi|84509346|gb|EAQ05805.1| hypothetical protein SKA53_06862 [Loktanella vestfoldensis SKA53]
          Length = 247

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           D G  N + S  +     +R+    +H TP P       R  +SGCVR+
Sbjct: 171 DGGPDNPLGSRALYLFDGNRDTYLRIHGTPSPRSIG--GRA-SSGCVRM 216


>gi|83953107|ref|ZP_00961829.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83842075|gb|EAP81243.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 201

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 56/195 (28%), Gaps = 47/195 (24%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVG 214
           V+S         +   +R+   +   +             +LV+I + ++    E+  + 
Sbjct: 32  VNSEATTETERDLTEAVRRNTSSFRTLDWQPYFSDTKNGAILVDIDSRAVHYWSEDQSIY 91

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
                 V   +  T    + + + +  P W    S+        L ++P++         
Sbjct: 92  KLYPSSVPLTEELTRRGRTSVIQKVVGPTWRPTPSM--------LERNPEW--------- 134

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFN 333
                                      PG  N + +  +        Y +H T +     
Sbjct: 135 ----------------------PAVIGPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG 170

Query: 334 NVVRFETSGCVRVRN 348
              R  ++GC+ + N
Sbjct: 171 ---RRSSNGCIGLYN 182


>gi|300868169|ref|ZP_07112801.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
 gi|300333793|emb|CBN57981.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
          Length = 701

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 6/102 (5%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMV---DS 159
            GN S+SV+ L+E+L           ++  +D     AV  FQ  + GL  +G V     
Sbjct: 159 PGNRSLSVKELQEQLKTLDYYK--GLITGNYDRPTAKAVSQFQKAYPGLPDNGTVNLTTK 216

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             L+                L+   KL    +  R     + 
Sbjct: 217 QLLDLATHSPQEDSVDEVQKLVLSDKLSSTPINGRAKTKGVA 258


>gi|315637697|ref|ZP_07892901.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Arcobacter butzleri JV22]
 gi|315478010|gb|EFU68739.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Arcobacter butzleri JV22]
          Length = 245

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 45/168 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
              N+   + +  +  +      V   + D + P+   +I  I  NP W           
Sbjct: 99  SSKNLMKVNAKYDKKIENLKTYKVSTAKKDIKKPLGVGQITSITLNPVWYPTA------- 151

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIE 314
                                       + +        +       G   N M S KI 
Sbjct: 152 ----------------------------DTIQSFKKRGIDLPKVVKAGDKLNYMGSAKIN 183

Query: 315 FYSR----NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
              +        +H T       +   +E+SGC+R++N  +++L   L
Sbjct: 184 LTHKVDGKETFRIHGTINEKTIGS---YESSGCIRMKNSEVVELVGLL 228


>gi|218459841|ref|ZP_03499932.1| hypothetical protein RetlK5_10219 [Rhizobium etli Kim 5]
          Length = 144

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 19/64 (29%), Gaps = 6/64 (9%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV 346
                        G +N + +  I  Y         +H T E         F +SGC R+
Sbjct: 67  KARSAGLPDLVPAGPLNPLGARGIYLYKDRTDTLYRIHGTNEQSTVG---GFASSGCFRM 123

Query: 347 RNII 350
            N  
Sbjct: 124 SNAD 127


>gi|108763212|ref|YP_631448.1| hypothetical protein MXAN_3249 [Myxococcus xanthus DK 1622]
 gi|108467092|gb|ABF92277.1| hypothetical protein MXAN_3249 [Myxococcus xanthus DK 1622]
          Length = 197

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            G  S +++  +ERL   G     +  S    A  +SAV+ FQ RHGL  +G +
Sbjct: 133 PGFESDALRAAQERLHNLGYAIEGERGSP--GASTKSAVRAFQRRHGLPETGQL 184


>gi|325262937|ref|ZP_08129673.1| spore cortex-lytic enzyme SleC [Clostridium sp. D5]
 gi|324032031|gb|EGB93310.1| spore cortex-lytic enzyme SleC [Clostridium sp. D5]
          Length = 420

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V++++E++ +I+G       +     +     ++V+ FQ   GL  +
Sbjct: 336 PGYILDIGASGDKVRQIQEQINVIAGAYPAIPKIAADGIYGPATAASVEKFQSVFGLPQT 395

Query: 155 GMVDSSTLEAMN 166
           G VD  T   ++
Sbjct: 396 GTVDYKTWYKIS 407


>gi|317130271|ref|YP_004096553.1| carboxyl-terminal protease [Bacillus cellulosilyticus DSM 2522]
 gi|315475219|gb|ADU31822.1| carboxyl-terminal protease [Bacillus cellulosilyticus DSM 2522]
          Length = 489

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L L  ++  +   +  L   G           F   +E AV+ FQ   G++ +
Sbjct: 395 PINTDEDLQLDMNNSHIATAQVILKGLGYDPQRS--DGYFSKEMEEAVRQFQADMGIEVT 452

Query: 155 GMVDSSTLEAMNV 167
           G++DS T + +  
Sbjct: 453 GVIDSETADQLQQ 465


>gi|298346070|ref|YP_003718757.1| hypothetical protein HMPREF0573_10944 [Mobiluncus curtisii ATCC
           43063]
 gi|298236131|gb|ADI67263.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
          Length = 559

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 98  PIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   +    G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG
Sbjct: 337 PPGTVVPQSGWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASG 392

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +VD +T         +R+     N+   +         R   ++  
Sbjct: 393 VVDYATW--------VRLTGRPWNMDNFQMQPPPLKANREQRIDAM 430


>gi|92118846|ref|YP_578575.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91801740|gb|ABE64115.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 187

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 48/175 (27%), Gaps = 46/175 (26%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R     + +     ++++     L  V      LR  + VGR D        RI      
Sbjct: 45  RQLVHFQSRYAPGTIVISTGERRLYLVLPDGQALRYGIGVGR-DGFRWGGVHRITAKKEW 103

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W  P  ++++                                        P+      
Sbjct: 104 PSWTPPAQMLRRR---------------------------------------PDLPRHMK 124

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
            G  N + +  +         +H + EP    +     +SGC R+ N  + DL  
Sbjct: 125 GGIDNPLGARALYLG-STLYRIHGSNEPETIGH---AVSSGCFRMTNEDVKDLYD 175


>gi|332670253|ref|YP_004453261.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332339291|gb|AEE45874.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 373

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 6/63 (9%)

Query: 108 SVSVQR----LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              V      L+E L  +G    +  +   +     +AV+  Q  HGL  +G VD +T  
Sbjct: 221 HDVVAARTSTLQESLSATGHY--TGTIDGIYGPATVAAVESLQSAHGLPVTGTVDRATDA 278

Query: 164 AMN 166
           A+ 
Sbjct: 279 ALR 281


>gi|188583349|ref|YP_001926794.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179346847|gb|ACB82259.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 282

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
             G  N + +  +      ++  Y +H T EP          +SGC+R+  +++IDL
Sbjct: 152 PGGDRNPLGARALYLFKDGKDTLYRIHGTTEPSSIGE---AVSSGCIRMLNQDVIDL 205


>gi|153810701|ref|ZP_01963369.1| hypothetical protein RUMOBE_01085 [Ruminococcus obeum ATCC 29174]
 gi|149833097|gb|EDM88179.1| hypothetical protein RUMOBE_01085 [Ruminococcus obeum ATCC 29174]
          Length = 501

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G+    V+ L+  L  +G          +          A+K +Q + GL   G    +T
Sbjct: 435 GSKGNDVKLLQRLLKSNGFKGKDGKNLTIDGECGTNTVYAIKTYQTKKGLSVDGCAGPAT 494

Query: 162 LEAM 165
            +++
Sbjct: 495 WKSI 498


>gi|328880761|emb|CCA54000.1| hypothetical protein SVEN_0713 [Streptomyces venezuelae ATCC 10712]
          Length = 137

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
            A +     S       + +A  ++A      +     W ++P   L  G+S V V+ L+
Sbjct: 21  TALLGGLASSPAQAYWPQDLATCKQAYGSEVYLA----W-DIPTVVLAKGSSGVCVRGLQ 75

Query: 116 ERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGMVDSSTLEAMNVPV 169
           + L+ +G +   D    +  +F     +AV  FQ R G+     G+V   T   +   V
Sbjct: 76  DALLEAGAVRAEDQPGFVDGSFGPKTYNAVVAFQRRAGVTGGADGVVGRYTWHHLIATV 134


>gi|307942391|ref|ZP_07657742.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
 gi|307774677|gb|EFO33887.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
          Length = 258

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G++   V R RE L    D          +  FD  +E     FQ   G+   
Sbjct: 149 PDGLLRRGDAGPDVHRWREDLGAYRDKIGHPYPVPATGPFDHTLELVTMWFQKERGIQVD 208

Query: 155 GMVDSSTLEAMN 166
           G+V    LE M 
Sbjct: 209 GIVGPQVLEEMK 220


>gi|242035087|ref|XP_002464938.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
 gi|241918792|gb|EER91936.1| hypothetical protein SORBIDRAFT_01g029150 [Sorghum bicolor]
          Length = 371

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSK-------GLSVAFDAYVESAVKLFQMRHGLDPSG 155
             G+    +  L+  L   G +             + AFDA++E+AV+ +Q +  L  +G
Sbjct: 57  RRGSHVAGLAELKRYLARFGYMPMPGAAAAAEREPTDAFDAHMEAAVRRYQSKLSLPVTG 116

Query: 156 MVDSSTLEAMNVP 168
            +D++TL+ +  P
Sbjct: 117 QLDATTLDRIMAP 129


>gi|158422635|ref|YP_001523927.1| hypothetical protein AZC_1011 [Azorhizobium caulinodans ORS 571]
 gi|158329524|dbj|BAF87009.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 220

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 44/186 (23%)

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIM 239
           L+R       K  +  ++V++P   L  VE     +R  V VG+    +    + I R  
Sbjct: 67  LLRQVVDYPSKYPVGTIVVDVPNRYLYLVEKDGKAIRYGVGVGKQG-YSYRGWATIKRKE 125

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
             P+W    ++I K                                          +   
Sbjct: 126 KWPHWTPTPNMIAK-----------------------------------QPERYKPYAAG 150

Query: 300 QDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
              G+ N +    +  Y  +      +H T EP          +SGC+R+  ++IIDL  
Sbjct: 151 LPGGETNPLGPRALYLYDGDRDTMFRLHGTIEPDTIGTE---VSSGCIRLLNQDIIDLYE 207

Query: 355 WLLKDT 360
            +   T
Sbjct: 208 RVPLGT 213


>gi|297158971|gb|ADI08683.1| hypothetical protein SBI_05563 [Streptomyces bingchenggensis BCW-1]
          Length = 395

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             R L  G     V++L + L   G       +   + A    AV+ +Q   GL  +G V
Sbjct: 151 AYRALKQGAEGADVRQLEKNLSALGY--TGFTVDDEYTAGTADAVREWQEDLGLAETGAV 208

Query: 158 DSSTLEAMNVPVDLRIRQLQ 177
                  +  P  +R+  + 
Sbjct: 209 --ELGSVVFAPDAVRVDSVA 226


>gi|296131512|ref|YP_003638762.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
 gi|296023327|gb|ADG76563.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
          Length = 157

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 85  YQDIL--SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVE 139
           Y+ ++  +  G   +P   L  G+S   VQ L++    S      +P+      F    E
Sbjct: 55  YRLLIPRATNGVVNVPC-WLKRGDSGAGVQALQKA-YNSCYKALYEPAIAEDGVFGPTTE 112

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V+  Q R G++  G+    T  ++  P
Sbjct: 113 DRVRQMQRREGIEVDGIAGEVTRNSIKWP 141


>gi|153955451|ref|YP_001396216.1| glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219855864|ref|YP_002472986.1| hypothetical protein CKR_2521 [Clostridium kluyveri NBRC 12016]
 gi|146348309|gb|EDK34845.1| Predicted glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219569588|dbj|BAH07572.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 306

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+ S  V  ++++L   G L  +    + +D     AV   Q   G    G++   T +
Sbjct: 243 GHRSHLVLWIQQKLEQYGYLKENSYTQMLYDETTFQAVTELQKNWGRSTDGVLKLQTWD 301


>gi|86751464|ref|YP_487960.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86574492|gb|ABD09049.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 217

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
           D G  N +    +      ++  Y +H T EP          +SGC+R+  +++IDL   
Sbjct: 151 DGGATNPLGPRALYLFKDGKDTLYRIHGTTEPETIGQ---AVSSGCIRMLNQDVIDLYAR 207

Query: 356 LLKDTP 361
           + K   
Sbjct: 208 VPKGAK 213


>gi|90419330|ref|ZP_01227240.1| putative ErfK/YbiS/YcfS/YnhG [Aurantimonas manganoxydans SI85-9A1]
 gi|90336267|gb|EAS50008.1| putative ErfK/YbiS/YcfS/YnhG [Aurantimonas manganoxydans SI85-9A1]
          Length = 239

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%), Gaps = 8/65 (12%)

Query: 293 PPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--R 347
                     G  N + +  +      R+  Y +H T +           +SGC+R+  +
Sbjct: 148 GGELRNGMKGGIDNPLGARALYLFKDGRDTLYRIHGTNQEWSIGK---AVSSGCIRMLNQ 204

Query: 348 NIIDL 352
           ++IDL
Sbjct: 205 DVIDL 209


>gi|330465557|ref|YP_004403300.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
 gi|328808528|gb|AEB42700.1| peptidoglycan-binding domain 1 protein [Verrucosispora maris
           AB-18-032]
          Length = 359

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            ++P  R L  G     V++L   L   G       +   +      AV+ +Q   G+  
Sbjct: 114 GKVPAYRTLQPGVEGPDVEQLERNLKALGY--TGFTVDDEYTWATADAVRAWQDDLGVPE 171

Query: 154 SGMV 157
           +G V
Sbjct: 172 TGRV 175


>gi|326390405|ref|ZP_08211963.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993523|gb|EGD51957.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 417

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V   T  A
Sbjct: 42  GTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKTYAA 99

Query: 165 MNV 167
           +  
Sbjct: 100 LET 102


>gi|149924298|ref|ZP_01912669.1| hypothetical protein PPSIR1_17095 [Plesiocystis pacifica SIR-1]
 gi|149814834|gb|EDM74401.1| hypothetical protein PPSIR1_17095 [Plesiocystis pacifica SIR-1]
          Length = 209

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)

Query: 101 PLHLG--NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L LG  +   +   ++ RL   G    +            +A++ FQ + GL+ +G  D
Sbjct: 139 KLKLGHLDPHDTPSGVQHRLRALGYYFGALDADH--GDRTAAALRRFQTKQGLEVTGEAD 196

Query: 159 SSTLEAMN 166
            +T+ A+ 
Sbjct: 197 DATMSALR 204


>gi|308173260|ref|YP_003919965.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606124|emb|CBI42495.1| bacteriophage PBSX N-acetylmuramoyl-L-alanine amidase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 292

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 4/67 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP----SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
               S   V +++  L            + G+   +     +AV  FQ  +GL   G+  
Sbjct: 222 EPYTSGEKVYQVQNALAALYFYPEKGAANNGIDGIYGPKTANAVARFQSVYGLPSDGIYG 281

Query: 159 SSTLEAM 165
            +    +
Sbjct: 282 PAVKAKI 288


>gi|308799155|ref|XP_003074358.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
 gi|116000529|emb|CAL50209.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
          Length = 1701

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 56/189 (29%), Gaps = 24/189 (12%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF-DAYVESAVKLFQMRHGLD 152
           WP +        +    +  +  +L+ +G           +  A  + A+  FQ ++GL 
Sbjct: 43  WPMVKQNE----DDIYLMVLIHGKLVDAGFWVGEDDSDDMYFGATTKEALLYFQAQNGLT 98

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE--QKMGLRYVLVNIPAASLEAVEN 210
            +G+VD  T  A+            +   + +                 + A +++  E 
Sbjct: 99  ETGLVDDETWRAL------------LGEEQYRWGPPPGAIAFDETEFQAVAATTVKTEEK 146

Query: 211 GKVGLR-----STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
            +  +              D   P                      ++    +LR+D   
Sbjct: 147 NEEKMANPDHFMAEEDYAPDEYDPFADDDEYTHEPQGPSFEMSKGKRQHKWPILREDDGG 206

Query: 266 LKDNNIHMI 274
           ++ + + ++
Sbjct: 207 MEVHKMQVL 215



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLD 152
           WP      L   +  + V +++  L   G       +    F +   +A+  FQ    L 
Sbjct: 197 WPI-----LREDDGGMEVHKMQVLLAEQGYDSGEDDMEYWYFGSTTSNALMTFQAVKRLP 251

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            SG+ D  T  A+   V+         L R+
Sbjct: 252 ESGITDIKTWCALLG-VEELEDSPAETLARV 281


>gi|262164753|ref|ZP_06032491.1| VgrG protein [Vibrio mimicus VM223]
 gi|262027133|gb|EEY45800.1| VgrG protein [Vibrio mimicus VM223]
          Length = 991

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 61/191 (31%), Gaps = 26/191 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIK------KLLEQKMGLRYVLVNIP 201
                  G+V   TL A++  +    + +    +          L   +    Y   N  
Sbjct: 782 YSIGAVDGIVGKGTLLALDEALMDGWQVVPATQINWADSKFGILLGSVESKNDYSAYNKT 841

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L++     +   + V V +      +  +   +++ +           KD +  L  
Sbjct: 842 KGGLKSFYRTNLDKMTIVEVLKKQESRDMFAAGRFQLIPDT---------LKDAINKLSI 892

Query: 262 DPQYLKDNNIH 272
           D   + D NI 
Sbjct: 893 DTSLVFDKNIQ 903


>gi|228912015|ref|ZP_04075738.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis IBL
           200]
 gi|228847619|gb|EEM92550.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis IBL
           200]
          Length = 432

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 36/81 (44%), Gaps = 3/81 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLF 145
           ++ G     P + L +G++   V  L++ +  I     +     +  +F    + +VK F
Sbjct: 336 IAEGNLESFPGQNLQIGSTGKYVNALQQYINKISQNYPEIGEITVDGSFGPATQKSVKKF 395

Query: 146 QMRHGLDPSGMVDSSTLEAMN 166
           Q    L  +G+VDS T   ++
Sbjct: 396 QSIFKLPQTGIVDSGTWYKIS 416


>gi|157737954|ref|YP_001490638.1| ErfK/YbiS/YcfS/YnhG family protein [Arcobacter butzleri RM4018]
 gi|157699808|gb|ABV67968.1| hypothetical protein, ErfK/YbiS/YcfS/YnhG family [Arcobacter
           butzleri RM4018]
          Length = 245

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 49/168 (29%), Gaps = 45/168 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
              N+   + +  +  +      V   + D + P+   +I  I  NP W           
Sbjct: 99  SSKNLMKVNAKYDKKIENLKTYKVSTAKKDIKKPLGVGQITSITLNPVWYP--------- 149

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI-NAMASTKIE 314
                                    V    ++       +       G   N M S KI 
Sbjct: 150 ------------------------TVD--TIESFKKRGIDLPKIVKAGDKLNYMGSAKIN 183

Query: 315 FYSR----NNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
              +        +H T       +   +E+SGC+R++N  +++L   L
Sbjct: 184 LTHKVDGKETFRIHGTINEKTIGS---YESSGCIRMKNSEVVELVGLL 228


>gi|269796632|ref|YP_003316087.1| peptidoglycan binding protein [Sanguibacter keddieii DSM 10542]
 gi|269098817|gb|ACZ23253.1| putative peptidoglycan binding protein [Sanguibacter keddieii DSM
           10542]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            G S   V+ LR+ L  +G  + + G   ++   +  A+  +Q  +G    G+   
Sbjct: 134 PGTSGADVEGLRDYLAAAG-SETTLGRGASYSPSLRRAITAYQRANGFPADGVFQP 188


>gi|294675751|ref|YP_003576366.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain-containing protein
           [Rhodobacter capsulatus SB 1003]
 gi|294474571|gb|ADE83959.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Rhodobacter
           capsulatus SB 1003]
          Length = 203

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 57/197 (28%), Gaps = 54/197 (27%)

Query: 170 DLRIRQLQVNLMR-------IKKLLEQKMGLRYV-LVNIPAASLEAV-ENGKVGLRSTVI 220
           + R      N+ R       +            + LV+  + +L    E+  +       
Sbjct: 40  EQREETANTNMRRNISSFRELDWKPYFSNTKNGIILVDTISRALHFWSEDESIYKLYPTS 99

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           V   +  T    + I R + NP W    S+         +++P++               
Sbjct: 100 VPVSEELTRRGRTEIIRKVKNPTWSPTPSMK--------QRNPEW--------------- 136

Query: 281 VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
                               + G  N + +  +    +    +H T +        R  +
Sbjct: 137 ----------------PDFVEAGPDNPLGTRAMYLSWQY-YRIHGTHDTRKIG---RKSS 176

Query: 341 SGCVRV--RNIIDLDVW 355
           +GC+ +  +++ +L   
Sbjct: 177 NGCIGLFNQHVEELFEL 193


>gi|153212843|ref|ZP_01948460.1| VgrG protein [Vibrio cholerae 1587]
 gi|124116221|gb|EAY35041.1| VgrG protein [Vibrio cholerae 1587]
          Length = 1039

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 20/160 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F    ++A++ FQ  +         
Sbjct: 724 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPS 783

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
                  G+V + TL A++  +       + + M +K L                   E 
Sbjct: 784 YSIGPVDGIVGNGTLLALDEALMDGWV-YENDEMDLKWLTVP--------KGQLTFDAEG 834

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
            +       S  +     R + I +S +           P
Sbjct: 835 NDVDSSTFFSRKVHVPNMRGSVIGNSGVTIGRGLDLGNPP 874


>gi|91978705|ref|YP_571364.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91685161|gb|ABE41463.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 224

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 44/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   +LQ   +R     +       V+V+     L  V  G   LR  V VG+   + 
Sbjct: 62  PGVDPSELQPAYVRQLVAYKTNEPPGTVVVDPRQRFLYLVMEGGEALRYGVGVGKAGLE- 120

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + + R    P W   + +I ++     +                           W
Sbjct: 121 FTGTANVGRKAAWPNWTPTQGMIAREPQRYGK---------------------------W 153

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G  N +    +      ++  Y +H T EP          +SGC+R
Sbjct: 154 AKGMSG--------GANNPLGPRALYLFKDGKDTLYRIHGTTEPETIGT---AVSSGCIR 202

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++IIDL   + K + 
Sbjct: 203 MLNQDIIDLYSRVPKGSK 220


>gi|260576136|ref|ZP_05844129.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
 gi|259021616|gb|EEW24919.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
          Length = 198

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 54/187 (28%), Gaps = 47/187 (25%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVG 222
            M     +R       ++  ++  +       +LV+I + +L    E+  +       V 
Sbjct: 38  EMEPSSTVRANISSFRMLDWREHFDNTRKG-AILVDITSRALHFWSEDQTIYKLYPTSVP 96

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
             D  T    + I   +  P W    ++ +        ++P++                 
Sbjct: 97  LTDDLTRRGRTEIVEKVVGPSWRPTPAMRE--------RNPEW----------------- 131

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
                              PG  N + +  +        Y +H T +        R  ++
Sbjct: 132 --------------PEFIGPGPDNPLGTHAMYLS--WTYYRIHGTHDTRKIG---RRSSN 172

Query: 342 GCVRVRN 348
           GC+ + N
Sbjct: 173 GCIGLYN 179


>gi|125583634|gb|EAZ24565.1| hypothetical protein OsJ_08327 [Oryza sativa Japonica Group]
          Length = 372

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+ T
Sbjct: 56  GEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDTDT 115

Query: 162 LEAMNVP 168
           ++ M  P
Sbjct: 116 VDQMVAP 122


>gi|125541078|gb|EAY87473.1| hypothetical protein OsI_08881 [Oryza sativa Indica Group]
          Length = 372

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+ T
Sbjct: 56  GEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDTDT 115

Query: 162 LEAMNVP 168
           ++ M  P
Sbjct: 116 VDQMVAP 122


>gi|192361798|ref|YP_001981559.1| general secretion pathway protein a [Cellvibrio japonicus Ueda107]
 gi|190687963|gb|ACE85641.1| general secretion pathway protein a [Cellvibrio japonicus Ueda107]
          Length = 587

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L LG+    V  + E+     D  P+      +   +++ V+LFQ  H + P G+  
Sbjct: 490 PGVLQLGDQGPLVTWVAEQFARL-DKQPAPLTRQYYTDKLKTRVELFQASHKMVPDGIFG 548

Query: 159 SSTLEAMN 166
             TL  +N
Sbjct: 549 VQTLRRLN 556


>gi|262190080|ref|ZP_06048374.1| VgrG protein [Vibrio cholerae CT 5369-93]
 gi|262034045|gb|EEY52491.1| VgrG protein [Vibrio cholerae CT 5369-93]
          Length = 432

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 133 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQSHPS 192

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 193 YSIGPVDGIVGKGTLLALD 211


>gi|254284375|ref|ZP_04959343.1| general secretion pathway protein A [gamma proteobacterium NOR51-B]
 gi|219680578|gb|EED36927.1| general secretion pathway protein A [gamma proteobacterium NOR51-B]
          Length = 559

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             P+ LG+ S  V  L  R     D   +      F+  +E+ V+LFQ   GL   G+V 
Sbjct: 470 SGPVGLGDESP-VVTLVARDFAELDDQATPLAETRFNQRLEARVRLFQRSEGLAADGVVG 528

Query: 159 SSTL 162
           ++T+
Sbjct: 529 AATM 532


>gi|149181804|ref|ZP_01860294.1| carboxyl-terminal processing protease [Bacillus sp. SG-1]
 gi|148850443|gb|EDL64603.1| carboxyl-terminal processing protease [Bacillus sp. SG-1]
          Length = 480

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    +PL    ++  V+  ++ L   G       +   F+   E+AV+ FQ +H L  +
Sbjct: 384 PLETEKPLAREMNNEQVKNAQQMLEGLGY--NPGRIDGYFNQATEAAVRSFQQKHELAAT 441

Query: 155 GMVDSST 161
           G +D+ T
Sbjct: 442 GKIDTDT 448


>gi|115448591|ref|NP_001048075.1| Os02g0740700 [Oryza sativa Japonica Group]
 gi|46390313|dbj|BAD15762.1| putative zinc metalloproteinase [Oryza sativa Japonica Group]
 gi|113537606|dbj|BAF09989.1| Os02g0740700 [Oryza sativa Japonica Group]
          Length = 372

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     + RL++ L   G L P       S AFD  +E+A+  +Q   GL+ +G +D+ T
Sbjct: 56  GEEREGLGRLKDYLSHFGYLPPPPSSSPYSDAFDDSLEAAIAAYQRNFGLNATGELDTDT 115

Query: 162 LEAMNVP 168
           ++ M  P
Sbjct: 116 VDQMVAP 122


>gi|319782836|ref|YP_004142312.1| N-acetylmuramoyl-L-alanine amidase family 2 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168724|gb|ADV12262.1| N-acetylmuramoyl-L-alanine amidase family 2 [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 252

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMV 157
              L  G++   ++ L+  L + G       +S  FD   E+ V+ FQ         G+ 
Sbjct: 179 GATLTTGDTGGDIEALQSMLALYGY---GVEISGVFDRQTEAVVEAFQRHFRPRKVDGVA 235

Query: 158 DSSTLEAMNV 167
           D STL  +  
Sbjct: 236 DGSTLRTLQR 245


>gi|313608100|gb|EFR84168.1| carboxypeptidase family protein [Listeria monocytogenes FSL F2-208]
          Length = 382

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 294 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVERFQAANKLDVTGIM 351

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 352 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 382


>gi|284802297|ref|YP_003414162.1| hypothetical protein LM5578_2053 [Listeria monocytogenes 08-5578]
 gi|284995439|ref|YP_003417207.1| hypothetical protein LM5923_2004 [Listeria monocytogenes 08-5923]
 gi|284057859|gb|ADB68800.1| hypothetical protein LM5578_2053 [Listeria monocytogenes 08-5578]
 gi|284060906|gb|ADB71845.1| hypothetical protein LM5923_2004 [Listeria monocytogenes 08-5923]
          Length = 496

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 408 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVERFQAANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|269957944|ref|YP_003327733.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269306625|gb|ACZ32175.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 363

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           I + G  P    R L  G     V +L+  L+ +G L         F A    AV+ +Q 
Sbjct: 110 IAAVGTVPAF--RDLSQGMKGEDVAQLQRFLVDAGYLKGRADGD--FGAATTVAVRAWQR 165

Query: 148 RHGLDPSGMV 157
              ++  G+V
Sbjct: 166 ILDVERDGVV 175


>gi|290893019|ref|ZP_06556008.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
 gi|290557379|gb|EFD90904.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
          Length = 496

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 408 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVERFQAANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|217963996|ref|YP_002349674.1| periplasmic protease [Listeria monocytogenes HCC23]
 gi|217333266|gb|ACK39060.1| periplasmic protease [Listeria monocytogenes HCC23]
 gi|307571434|emb|CAR84613.1| carboxypeptidase, ctpA-family [Listeria monocytogenes L99]
          Length = 496

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 408 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVERFQAANKLDVTGIM 465

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
              T + +       +++    L + K L++
Sbjct: 466 TGVTTDKLVELTQKHLKETDPQLQKAKALVK 496


>gi|213583711|ref|ZP_03365537.1| hypothetical protein SentesTyph_21815 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 35

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 12/31 (38%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               +   +  AVK FQ   GL   G++   
Sbjct: 5   TDNIYTPELVEAVKRFQQWQGLTDDGVIGPR 35


>gi|239828311|ref|YP_002950935.1| carboxyl-terminal protease [Geobacillus sp. WCH70]
 gi|239808604|gb|ACS25669.1| carboxyl-terminal protease [Geobacillus sp. WCH70]
          Length = 480

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    ++  V+  ++ L   G           F    ESAVK FQ  + L  +G +D 
Sbjct: 391 KELSFDMNNEQVKSAQQMLKGLGF--DPGRTDGYFSKETESAVKAFQKANKLPQTGKIDK 448

Query: 160 STLEAMNVPVDLRIR 174
           +T E +   V   IR
Sbjct: 449 NTAEVLQAKVMDAIR 463


>gi|153830422|ref|ZP_01983089.1| VgrG protein [Vibrio cholerae 623-39]
 gi|148874096|gb|EDL72231.1| VgrG protein [Vibrio cholerae 623-39]
          Length = 1037

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 31/214 (14%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQ-----TEKAIAFYQDILSRGGWPELPIRPLHL 104
                 +        +D P+  ++T  +       K     + +  R             
Sbjct: 674 ASLPTIMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQ------ASAYRQ 727

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-----------LDP 153
           GN S  V+ L+E LI  G      G    F    ++A++ FQ  +               
Sbjct: 728 GNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPSYSIGPV 787

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
            G+V + TL A++  +       + + M +K L                   E  +    
Sbjct: 788 DGIVGNGTLLALDEALMDGWV-YENDEMDLKWLTVP--------KGQLTFDAEGNDVDSS 838

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
              S  +     R + I +S +           P
Sbjct: 839 TFFSRKVHVPNMRGSVIGNSGVTIGRGLDLGNPP 872


>gi|147790365|emb|CAN59960.1| hypothetical protein VITISV_011608 [Vitis vinifera]
          Length = 319

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 7/106 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L        +   +  FD  +E A+K +Q  + L  SG +D
Sbjct: 44  GHKVKDIHKLKKYLQQFGYLSYSHSEHQTHADNDDFDDLLEFAIKTYQTNYYLKASGNLD 103

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           S T+  M  P       +     R++               +   S
Sbjct: 104 SETVSVMVKPRCGVADIINGT-SRMRSGSRSYPHGYGSFHTVAHYS 148


>gi|315604691|ref|ZP_07879754.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315313703|gb|EFU61757.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 353

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 49/157 (31%), Gaps = 12/157 (7%)

Query: 24  LSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP--IISKETIAQTEKA 81
                  I    L        +    D +D   A   +      P   + + +   T   
Sbjct: 30  FDGATATITRGDLSGETAVQGNLHYADSYDLKSAFTGVITALPTPGTTLEQGSHVYTVAG 89

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            + Y    +   W +        G S    V++L   L   G        +  FD    +
Sbjct: 90  NSAYLLHGATPAWRDFSE-----GMSDGADVKQLETALSELGYF--QATPNEHFDWNTIA 142

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           A+K +Q   GL   G +   T+  +  P D+R+  L+
Sbjct: 143 AIKRWQKALGLTQDGTLPLGTV--LFAPEDVRVGALK 177


>gi|256751507|ref|ZP_05492384.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256749591|gb|EEU62618.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 422

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V   T  A
Sbjct: 47  GTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKTYAA 104

Query: 165 MNV 167
           +  
Sbjct: 105 LET 107


>gi|227498873|ref|ZP_03929013.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904325|gb|EEH90243.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 219

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           PL +G+    V+ ++ +L   G       L+  +   +E  V++FQ  H L  +G VD  
Sbjct: 17  PLKVGDKGWKVKTVQTKLNTLGL---KTPLTGKYSRDLEKQVRIFQKTHKLPVTGKVDDK 73

Query: 161 TL 162
           T 
Sbjct: 74  TY 75


>gi|167036901|ref|YP_001664479.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115320|ref|YP_004185479.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855735|gb|ABY94143.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928411|gb|ADV79096.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 422

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V   T  A
Sbjct: 47  GTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKTYAA 104

Query: 165 MNV 167
           +  
Sbjct: 105 LET 107


>gi|315654655|ref|ZP_07907561.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315491119|gb|EFU80738.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
          Length = 658

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 98  PIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   +    G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG
Sbjct: 436 PPGTVVPQSGWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASG 491

Query: 156 MVDSSTLEAMNVPV 169
           +VD +T   +    
Sbjct: 492 VVDYATWVRLTGRP 505


>gi|140223|sp|P05448|YAT5_RHOBL RecName: Full=Putative L,D-transpeptidase in ATP synthase subunits
           region ORF 5; Flags: Precursor
 gi|45975|emb|CAA77311.1| URF 5 [Rhodobacter blasticus]
          Length = 189

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 21/182 (11%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           L Q      V  N+    + A  +    L      G+           ++       W  
Sbjct: 28  LSQDAAPATVRNNVSGFQMHAWRDHFDSL------GKPMLVADTFSRALHY------WNA 75

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
                +  +          L       I  K +              P++     PG  N
Sbjct: 76  EGGDHR--IFPTSVPISDDLTKRGYTEIVRKKEGPSWTPTPSQMARYPDWKPI-GPGPDN 132

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
            + +  +         +H T +        R  + GC+ + N  ++   L +  P  +R 
Sbjct: 133 PLGTHAMYLSWPAYI-IHGTHDTRKIG---RRSSDGCIGLYN--EMIAELFQLCPVGTRV 186

Query: 367 HI 368
            +
Sbjct: 187 RV 188


>gi|91776201|ref|YP_545957.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
 gi|91710188|gb|ABE50116.1| ErfK/YbiS/YcfS/YnhG [Methylobacillus flagellatus KT]
          Length = 160

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 8/57 (14%)

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
           N + +       +   Y+H TPE           + GC+R+RN    +L   +  +T
Sbjct: 103 NRLGNVD---SMQRYIYIHGTPECEPMGE---AHSHGCIRMRNADVRELFDLVPVNT 153


>gi|315657433|ref|ZP_07910315.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|315491905|gb|EFU81514.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 658

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 98  PIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   +    G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG
Sbjct: 436 PPGTVVPQSGWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASG 491

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +VD +T         +R+     N+   +         R   ++  
Sbjct: 492 VVDYATW--------VRLTGRPWNMDNFQMQPPPLKANREQRIDAM 529


>gi|294677991|ref|YP_003578606.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
 gi|294476811|gb|ADE86199.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
          Length = 207

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 19/92 (20%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDP-------------GKINAMASTKIEFY-SRN--NT 321
           G+     +V+W S +P   + ++ P             G  N + +  +  Y + +    
Sbjct: 105 GQATVARKVEWPSWKPTPEMVKRSPSHYARYAETGMPGGPGNPLGARAMYLYQNGHDTGI 164

Query: 322 YMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
            +H T EP    +     ++GC+R+ N   + 
Sbjct: 165 RIHGTIEPSSIGH---AVSNGCLRMVNDHVMA 193


>gi|192292423|ref|YP_001993028.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
 gi|192286172|gb|ACF02553.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
          Length = 288

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 10/85 (11%)

Query: 86  QDILSRG--GWPE----LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W E    +P   L  G     V+ +++ L   G       ++ ++D    
Sbjct: 187 RSLAASGVGLWVEPARIVPGPALKQGTEGDEVRLMQQALADYGY---RVPVNGSYDHATT 243

Query: 140 SAVKLFQMRHG-LDPSGMVDSSTLE 163
             V  FQ         G+ D+STL 
Sbjct: 244 DVVTAFQRHFRPEKVDGIADASTLA 268


>gi|325291502|ref|YP_004277366.1| hypothetical protein AGROH133_02862 [Agrobacterium sp. H13-3]
 gi|325059355|gb|ADY63046.1| hypothetical protein AGROH133_02862 [Agrobacterium sp. H13-3]
          Length = 257

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 63/205 (30%), Gaps = 46/205 (22%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV 213
           + +    T +A      + I ++     R     +       ++VN     L  +  G  
Sbjct: 77  NDVYGPVT-DAGYALPAIPINRVNEKFRRQIVEFQNNERPGTIIVNTRERFLYYILPGNR 135

Query: 214 GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM 273
            +R  + VG+         + +      P W  P     K+M     +  +Y++      
Sbjct: 136 AVRYGIGVGKAGFA-WAGEAYVAWKQEWPMWHPP-----KEMADRKPEVAKYVEAG---- 185

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEP 329
                                       PG  N + +  +  ++         +H +PE 
Sbjct: 186 --------------------------MGPGLSNPLGARAMYLFNEKGQDTLFRIHGSPEW 219

Query: 330 ILFNNVVRFETSGCVRV--RNIIDL 352
                     +SGC+R+  +++IDL
Sbjct: 220 ASIGT---AASSGCIRMINQDVIDL 241


>gi|289579043|ref|YP_003477670.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
 gi|289528756|gb|ADD03108.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
           Ab9]
          Length = 420

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V   T   
Sbjct: 45  GTYGTDVKELQAMLNKTGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKTYAV 102

Query: 165 MNV 167
           +  
Sbjct: 103 LET 105


>gi|229514626|ref|ZP_04404087.1| VgrG protein [Vibrio cholerae TMA 21]
 gi|229348606|gb|EEO13564.1| VgrG protein [Vibrio cholerae TMA 21]
          Length = 1025

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 12/100 (12%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                  G+V   TL A++  +       + + M +K L 
Sbjct: 782 YSIGAVDGIVGKGTLLALDEALMDGWV-YENDEMDLKWLT 820


>gi|256824798|ref|YP_003148758.1| peptidoglycan binding protein [Kytococcus sedentarius DSM 20547]
 gi|256688191|gb|ACV05993.1| putative peptidoglycan binding protein [Kytococcus sedentarius DSM
           20547]
          Length = 335

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 5/112 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            ++P  R +  G     V++L++ L+  G       +          A++ +Q   G+D 
Sbjct: 87  GKVPAFRKIGAGTEGADVKQLQQLLMQGGHFA--GTVDGTAGKDTVQAIRAWQRSQGIDA 144

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           +G+V     + + VP       L   ++R    L         L   P+  +
Sbjct: 145 TGVVGPG--DVIYVPSLPARVTLDTEVVRTGATLSGGEEALQGLPAAPSFEM 194


>gi|87304054|ref|ZP_01086646.1| hypothetical protein WH5701_16835 [Synechococcus sp. WH 5701]
 gi|87281509|gb|EAQ73550.1| hypothetical protein WH5701_16835 [Synechococcus sp. WH 5701]
          Length = 163

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 46/159 (28%), Gaps = 52/159 (32%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + V++    L   ENGKV  +  + +G  +  T      I R   +P         
Sbjct: 34  ADMSIEVSLKNRYLTLFENGKVIGKYPIAIGAPESPTIPGQFDIQRKDASP--------- 84

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                                +  +KGK +                    PG  N +   
Sbjct: 85  ---------------------IYHKKGKVI-------------------APGPDNPVGVR 104

Query: 312 KIEFY--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +    R+   +H T  P   N      + GC+R+ N
Sbjct: 105 YMPYVRIGRDEYAIHGTAWPSWVNLRA-AVSLGCIRMLN 142


>gi|304390171|ref|ZP_07372125.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|304326653|gb|EFL93897.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
          Length = 635

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 98  PIRPLHL--GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   +    G +   V+ +R RL +          S+ FD    +AV  FQ R GL  SG
Sbjct: 413 PPGTVVPQSGWNGTKVREVRARLGV----GVPLNASMTFDRATRNAVVRFQRRSGLPASG 468

Query: 156 MVDSSTLEAMNVPV 169
           +VD +T   +    
Sbjct: 469 VVDYATWVRLTGRP 482


>gi|237793906|ref|YP_002861458.1| hypothetical protein CLJ_B0656 [Clostridium botulinum Ba4 str. 657]
 gi|229260455|gb|ACQ51488.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 694

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 48/146 (32%), Gaps = 11/146 (7%)

Query: 34  SVLDEII----NESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDIL 89
           S +DE +     +     +    +         I  +  + S++T     KA+   + I 
Sbjct: 129 STMDEFVLASTGDPNVRKIQQNLNRDYYETIGLIPCNG-VYSRDTNRALIKALQVEEGIT 187

Query: 90  SRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
             G W        P   G++S    V  L+  L ++G      G    F   + +A+K F
Sbjct: 188 PDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG--IDPNGFDGLFGNGLSNAIKEF 245

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q    L   G        ++ V    
Sbjct: 246 QSFCALPADGYAGKQVWASLLVSTGD 271


>gi|15616161|ref|NP_244466.1| carboxy-terminal processing protease [Bacillus halodurans C-125]
 gi|10176223|dbj|BAB07318.1| carboxy-terminal processing protease [Bacillus halodurans C-125]
          Length = 479

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            PL L   +  ++  +  L   G           F+   E AV+ FQ    L+ +G++D 
Sbjct: 387 EPLELDMLNDQIEHAQMMLKGLGF--EPGRTDGYFEEQTEKAVRAFQDSQELETTGVLDE 444

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIK 184
            T  A+   +   +R  Q N  +++
Sbjct: 445 ETAIALQQSIVDLVRD-QENDQQLR 468


>gi|158422481|ref|YP_001523773.1| putative chitinase [Azorhizobium caulinodans ORS 571]
 gi|158329370|dbj|BAF86855.1| putative chitinase [Azorhizobium caulinodans ORS 571]
          Length = 301

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 94  WPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           W ++    L     +  +   L+E L   G    S  +         +A++ FQ R+GL 
Sbjct: 219 WSQIGTGALWRAAGADDATADLQESLNALGY---SLTVDGRQGPATTAAIRDFQSRNGLK 275

Query: 153 PSGMVDSST 161
             G+    T
Sbjct: 276 ADGIAGPVT 284


>gi|320529545|ref|ZP_08030629.1| 3D domain protein [Selenomonas artemidis F0399]
 gi|320138166|gb|EFW30064.1| 3D domain protein [Selenomonas artemidis F0399]
          Length = 234

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +VQ ++E LI +G L+   G      A   +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVQHVQELLIKAGYLE-EGGADGVAGAKTRAAIERCQTDHMLVVDGICGEATY 114

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             + +   +    + + +   +     +   R + V+  A S  
Sbjct: 115 --LVLSGGVPYDPVALGIRDERSEQVSRGSGRSLFVSATAYSAH 156


>gi|313896950|ref|ZP_07830497.1| 3D domain protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974397|gb|EFR39865.1| 3D domain protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 234

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 3/104 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G    +VQ ++E LI +G L+   G      A   +A++  Q  H L   G+   +T 
Sbjct: 56  KEGMRGGAVQHVQELLIKAGYLE-EGGADGVAGAKTRAAIERCQTDHMLVVDGICGEATY 114

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLE 206
             + +   +    + + +   +     +   R + V+  A S  
Sbjct: 115 --LVLSGGVPYDPVALGIRDERSEQVSRGSGRSLFVSATAYSAH 156


>gi|291303383|ref|YP_003514661.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572603|gb|ADD45568.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 381

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           + +G+    V++L + L   G       +   F A   +AV+ +Q   GL  +G V 
Sbjct: 144 MKVGDEGSDVKQLEKNLAKLGY--DGFTVDKEFTADTATAVREWQDDLGLKETGTVT 198


>gi|254463995|ref|ZP_05077406.1| ErfK/YbiS/YcfS/YnhG [Rhodobacterales bacterium Y4I]
 gi|206684903|gb|EDZ45385.1| ErfK/YbiS/YcfS/YnhG [Rhodobacterales bacterium Y4I]
          Length = 200

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 7/94 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMH 324
           L       I  K +              P    R + G   N + +  +         +H
Sbjct: 102 LTRRGYSQIVRKAENPSWTPTQSMRERDPTLPARIEGGVPGNPLGTRAMYLDWP-AYLVH 160

Query: 325 DTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            T +        R  +SGC+ + N  + +L   +
Sbjct: 161 GTHDTRKIG---RQSSSGCIGLYNQHVEELYEMV 191


>gi|126668023|ref|ZP_01738987.1| putative transglycosylase protein [Marinobacter sp. ELB17]
 gi|126627533|gb|EAZ98166.1| putative transglycosylase protein [Marinobacter sp. ELB17]
          Length = 480

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++ L+ +L I G       +         SA+K  Q  HGL  +G +   TL ++  P
Sbjct: 340 AELKALQRQLAIYGY--KPGTIDGIMGQNTRSAIKRLQREHGLPETGWLSRETLLSLVEP 397


>gi|150390170|ref|YP_001320219.1| peptidoglycan binding domain-containing protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950032|gb|ABR48560.1| Peptidoglycan-binding domain 1 protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 148

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++ +L   G       +        ++A+K FQ  + L   G+V   T +A+ +
Sbjct: 97  IQSKLNSLGY--DCGVVDGIMGLKTKAAIKAFQKDNDLTVDGIVGPQTRKALEI 148


>gi|296446889|ref|ZP_06888825.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296255564|gb|EFH02655.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 187

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 277 KGKEVFVEEVDWNSPEPPNFI---FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN 333
            GK V  + V     +  +     F +     N M    +    RN   +H T   +  +
Sbjct: 95  DGKYVNPDWVPPTVVKRDHPELPDFIRGGSPHNPMGVRALTL-DRNQVAIHGTTHKMRAS 153

Query: 334 NVVRFETSGCVRV--RNIIDLDV 354
                 + GC+R+   +++DL  
Sbjct: 154 VGT-AASYGCIRMLNEDVVDLYE 175


>gi|239979525|ref|ZP_04702049.1| hypothetical protein SalbJ_08818 [Streptomyces albus J1074]
 gi|291451393|ref|ZP_06590783.1| predicted protein [Streptomyces albus J1074]
 gi|291354342|gb|EFE81244.1| predicted protein [Streptomyces albus J1074]
          Length = 301

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 100 RPLHLGNSSVSVQRLRER------------LIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
             L+ G+S      L++             L   G      G+  A+    E AVK  Q 
Sbjct: 224 GRLYAGHSDTQDALLQQISTTWEVVEAQCLLEHRGY--RIGGIDGAYGPATERAVKRLQD 281

Query: 148 RHGLDPSGMVDSSTLEAMNV 167
           R GL   G++   T EA+  
Sbjct: 282 REGLVVDGIMGPHTWEALRR 301


>gi|254487693|ref|ZP_05100898.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
 gi|214044562|gb|EEB85200.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter sp. GAI101]
          Length = 216

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 55/188 (29%), Gaps = 47/188 (25%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR-YVLVNIPAASLEAV-ENGKVGLRSTVIV 221
            +   V   +R+   +   +             VLV+I + ++    E+  +       V
Sbjct: 54  EVERDVTESVRRNISSFRTLDWQPYFDNTRNGAVLVDIDSRAVHFWSEDQSIYKLYPSSV 113

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              D  T    + + + +  P W    S+        L+++P++                
Sbjct: 114 PLTDELTRRGRTSVIQKVVGPTWRPTPSM--------LKRNPEW---------------- 149

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFET 340
                              + G  N + +  +        Y +H T +        R  +
Sbjct: 150 ---------------PAVIEAGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RRSS 189

Query: 341 SGCVRVRN 348
           +GC+ + N
Sbjct: 190 NGCIGLYN 197


>gi|323139838|ref|ZP_08074870.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322394918|gb|EFX97487.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 273

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 6/65 (9%)

Query: 291 PEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVR 347
              P+     D    N + +  +      ++  + +H T EP          +SGC+R+ 
Sbjct: 197 LRRPDLPTHMDGSLENPLGARALYLFKGGKDTLFRIHGTNEPDTIGK---AVSSGCIRMM 253

Query: 348 NIIDL 352
           N   +
Sbjct: 254 NADAI 258


>gi|284028528|ref|YP_003378459.1| peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
 gi|283807821|gb|ADB29660.1| Peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
          Length = 359

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 5/120 (4%)

Query: 95  PELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  + L  G S   V +L + L+  G L      +  F +   +AV  +Q   G   
Sbjct: 115 GTVPLYKTLEQGVSGPDVLQLEQYLVSGGWLKVKA--NTTFGSATTAAVLDWQDATGQPE 172

Query: 154 SGMVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
           +G V    L    VP  V ++  Q+   L     L         V+V +  A    V+ G
Sbjct: 173 TGQVKPGQLVVRPVPIRVAVQEAQIGDQLGGGTPLYTFSTTQPKVVVGLDVAKQHLVKKG 232


>gi|303286976|ref|XP_003062777.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455413|gb|EEH52716.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 370

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 38/99 (38%), Gaps = 2/99 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +S  V  L+  L   G      G +  F     +AVK +Q  +G+ PSG     + EA
Sbjct: 96  GETSERVAELQRYLAGEGHYKYRDGATGYFGPITVNAVKNWQRFYGVKPSGGWGVESREA 155

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
                + RI +L     +  +      G R  ++  P  
Sbjct: 156 YLR--ERRILELGAREGKAARGRIGGPGGREDVIAEPDF 192


>gi|148979384|ref|ZP_01815490.1| putative general secretion pathway protein A [Vibrionales bacterium
           SWAT-3]
 gi|145961820|gb|EDK27113.1| putative general secretion pathway protein A [Vibrionales bacterium
           SWAT-3]
          Length = 546

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 7/83 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +     L  G    +V  L    ++S  L      S  FD  ++  V+ FQ   G+  
Sbjct: 458 WKQPLRETLKEGYQGEAVALLDL--LLSEVLGEVVSGSDVFDYELKMKVEAFQTWQGMSV 515

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL 176
            G+    TL  +      R+ QL
Sbjct: 516 DGIAGQRTLARL-----QRLAQL 533


>gi|42524982|ref|NP_970362.1| hypothetical protein Bd3639 [Bdellovibrio bacteriovorus HD100]
 gi|39577193|emb|CAE81016.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 215

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 1/47 (2%)

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
             G  N + +     +      +H TP+        R  + GC+R+ 
Sbjct: 146 PGGDYNGLGNMPYAVFISGGFALHGTPQGNWSKLGTRA-SHGCIRMH 191


>gi|85714964|ref|ZP_01045949.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Nitrobacter sp.
           Nb-311A]
 gi|85698161|gb|EAQ36033.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Nitrobacter sp.
           Nb-311A]
          Length = 285

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 31/102 (30%), Gaps = 12/102 (11%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L  G+   +VQ L++ L   G        +  FD      V  FQ 
Sbjct: 191 GHWVRPAPIVAGDVLKTGSEGDNVQALQQSLARYGY---GIKATGKFDTATTEVVTAFQR 247

Query: 148 RHG-LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                   G+ D STL      +   +  L         +  
Sbjct: 248 HFRPEKVDGLADQSTL----TTLQALLESLPAQTAEASGITR 285


>gi|114320621|ref|YP_742304.1| lytic murein transglycosylase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227015|gb|ABI56814.1| lytic murein transglycosylase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 400

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 3/81 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I   G     P  P        +V+RL+E L   G    +  +          AV+ FQ
Sbjct: 319 RIAGTGDLKTRPAEPPEA-MRIEAVKRLQETLNALGY--EAGPVDGQPGRQTRKAVRAFQ 375

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
              GL   G      L+A   
Sbjct: 376 QDAGLPADGHPSPRVLQAAEA 396


>gi|295839236|ref|ZP_06826169.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295827362|gb|EFG65354.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 238

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-G 155
           +    L  G+S   V  L+ERL + G      G S  FD  +  A+  +Q+  G     G
Sbjct: 162 VAAPVLRRGDSGPEVGELKERLRLVGIYPGGDGDS--FDRTLAYALTTYQITRGARDEHG 219

Query: 156 MVDSSTLEAMN 166
           +  S T   + 
Sbjct: 220 VYGSDTRTKLE 230


>gi|190572347|ref|YP_001970192.1| putative peptidoglycan-binding motif protein [Stenotrophomonas
           maltophilia K279a]
 gi|190010269|emb|CAQ43877.1| putative peptidoglycan-binding motif protein [Stenotrophomonas
           maltophilia K279a]
          Length = 593

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 53/176 (30%), Gaps = 19/176 (10%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
             + +        + +   ++V   + +   +  +  D      +++ +   ++A     
Sbjct: 300 GSQTLKEGSSGRDVLKLESNLVTLGYASAGGQQTLNPDRRFDATTRKAVEDFQRA-HNLD 358

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG--DLDPSKGLSVAF-DAYVESAVK 143
            +  + G   L        +       L+  L   G  D       S  +       A+ 
Sbjct: 359 PVDGKAGPATLAAI-----DRDAR--ELQGNLAALGLTDAKGQAIGSDGYLGGGSRHAIN 411

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRI--------RQLQVNLMRIKKLLEQKM 191
            FQ +HGL  +G+ D+ T +A+   V  R         +Q      R         
Sbjct: 412 AFQQQHGLPATGIADAETRQALANEVQQRAQAQGSTPEQQAAAEPARETVYPMSDP 467


>gi|187735022|ref|YP_001877134.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425074|gb|ACD04353.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 209

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 47/202 (23%)

Query: 149 HG--LDPSGMVDSSTLEAMNVPVDLRI-RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           HG  L   G   +S+ EA       R  R +  +  RI+   +       +++++     
Sbjct: 29  HGKPLMKDGRY-ASSYEAFVADPQYRFTRDIWYHDERIR---QAGTRNSKIVIHLKDQRG 84

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
             + +GK  +   V  G+   +TP     I                       +++D  Y
Sbjct: 85  VLLVDGKPAMNFPVCTGKSAHKTPRGKFSI-----------------------IQKDADY 121

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
              +   + D  G  V  +    +   P         G    +    +  +      +H 
Sbjct: 122 RSRSYGSVFDASGLCVNSDATSSSRVPPGGKFI----GAKMPL---WMRIHG--GIGLH- 171

Query: 326 TPEPILFNNVVRFE-TSGCVRV 346
                    V R   + GC+RV
Sbjct: 172 ------VGTVFRDANSHGCIRV 187


>gi|119489741|ref|ZP_01622499.1| putative hydrolase [Lyngbya sp. PCC 8106]
 gi|119454315|gb|EAW35465.1| putative hydrolase [Lyngbya sp. PCC 8106]
          Length = 435

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G +   VQ L+  L   G       +   F    ++A+  FQ   GL   G+ +  T  
Sbjct: 193 VGTTGSKVQDLQSLLKNRGF--DPGSIDGIFGNGTKTAILKFQKSKGLAEDGIANLKTWT 250

Query: 164 AM 165
           A+
Sbjct: 251 AL 252


>gi|114769813|ref|ZP_01447423.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [alpha
           proteobacterium HTCC2255]
 gi|114549518|gb|EAU52400.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [alpha
           proteobacterium HTCC2255]
 gi|119713558|gb|ABL97610.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [uncultured
           marine bacterium EB0_39F01]
          Length = 212

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 41/150 (27%), Gaps = 47/150 (31%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           E   +     V V   D  T +  + I      P W    S+        L+ +P     
Sbjct: 97  EKQDIYKLYPVAVPSSDDLTRLGRTSITGKRVGPDWRPTPSM--------LKSNP----- 143

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTP 327
                             DW S           PG  N + S  +        Y +H T 
Sbjct: 144 ------------------DWPSYIG--------PGPGNPLGSHALYLS--WTYYRIHGTH 175

Query: 328 EPILFNNVVRFETSGCVRVRNII--DLDVW 355
           +        R  ++GC+ + N    +L   
Sbjct: 176 DNRKIG---RRSSNGCIGLYNAQIAELFDL 202


>gi|167647642|ref|YP_001685305.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Caulobacter sp. K31]
 gi|167350072|gb|ABZ72807.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Caulobacter sp. K31]
          Length = 243

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 29/84 (34%), Gaps = 9/84 (10%)

Query: 89  LSRGGW---PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              G W   P  P  PL  G     V  L+  L   G    +   S  +D +  + V  F
Sbjct: 158 AGHGLWVEPPPSPGAPLGQGEEGTGVFALQAGLTRLGY---NCPPSGNYDEWTATVVAAF 214

Query: 146 QMRHGLDP--SGMVDSSTLEAMNV 167
           Q RH L     G+ D  T   +  
Sbjct: 215 Q-RHWLQTRFDGVADGETRARLVA 237


>gi|85705611|ref|ZP_01036709.1| hypothetical protein ROS217_02275 [Roseovarius sp. 217]
 gi|85670036|gb|EAQ24899.1| hypothetical protein ROS217_02275 [Roseovarius sp. 217]
          Length = 225

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 42/152 (27%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+  A  L  +E     +R  V + R     P     I R +  P+W   +++I      
Sbjct: 78  VDAVARYLYHIEESGTAMRYGVAIARGKLYEP-GTYTIKRKVRWPHWQPTQNMI------ 130

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
              +DP+        + D                         +PG  NA+ S  +  Y 
Sbjct: 131 --DRDPEIYA----EVADG-----------------------MEPGPKNALGSRALYLYV 161

Query: 318 RN-NTY--MHDTPEPILFNNVVRFETSGCVRV 346
            + +TY  +H TP P       R  +SGCVR+
Sbjct: 162 GDRDTYLRIHGTPHPKSIG--GRA-SSGCVRM 190


>gi|255552736|ref|XP_002517411.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223543422|gb|EEF44953.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 311

 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G++   +  L++ L   G L     S      FD  +E A+K +Q  + L+ +G +DS T
Sbjct: 50  GDNLKGIHDLKKYLENFGYLSYKNQSHSNDDDFDDLLEYALKTYQFNYHLNVTGFLDSET 109

Query: 162 LEAMNVP 168
           +  M +P
Sbjct: 110 VTKMMMP 116


>gi|315505824|ref|YP_004084711.1| peptidoglycan-binding domain 1 protein [Micromonospora sp. L5]
 gi|315412443|gb|ADU10560.1| Peptidoglycan-binding domain 1 protein [Micromonospora sp. L5]
          Length = 377

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 13/105 (12%)

Query: 69  IISKETIAQTEKAIAF------YQDILSRGGWPELPIRPLHLGNSSVSVQRLRER--LII 120
           +    T+A  +   A           L+   W  L      L   S  V  +  +  L  
Sbjct: 266 VFDAATVAAVQDWQARNGIPVDVDATLTAPTWETLAP---ELDQKSSGVPVVAAQFMLAS 322

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            G        +  +D    +AVK  Q  HGL P+G + ++T  A+
Sbjct: 323 KGY--AEVTPTGEYDHATRTAVKDLQRLHGLPPNGKISTTTWCAL 365



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGMVDSSTLE 163
              V+  +  L   G    +  ++  FDA   +AV+ +Q R+G+       + + T E
Sbjct: 244 GPVVRVAQYLLTFRGY---TVPVTGVFDAATVAAVQDWQARNGIPVDVDATLTAPTWE 298


>gi|262173037|ref|ZP_06040714.1| VgrG protein [Vibrio mimicus MB-451]
 gi|261890395|gb|EEY36382.1| VgrG protein [Vibrio mimicus MB-451]
          Length = 991

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 65/191 (34%), Gaps = 26/191 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN+S  V+ L++ LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNNSEEVRLLQKALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMNVPVDLRIRQL---QVNLMRIK---KLLEQKMGLRYVLVNIP 201
                  G+V   TL A++  +    + +   Q+N    K    L   +    Y   N  
Sbjct: 782 YSIGPVDGIVGKGTLLALDEALMDGWQVVPAPQINWADSKFGILLGSVESKNDYSAYNKT 841

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQ 261
              L++     +   + V V +      +  +   +++ +           KD +  L  
Sbjct: 842 KGGLKSFYRTNLDKMTIVEVLKKQESRDMFAAGRFQLIPDT---------LKDAINKLSI 892

Query: 262 DPQYLKDNNIH 272
           D   + D NI 
Sbjct: 893 DTSLVFDKNIQ 903


>gi|148378742|ref|YP_001253283.1| phage related N-acetylmuramoyl-L-alanine amidase [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932011|ref|YP_001383128.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153934498|ref|YP_001386678.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|148288226|emb|CAL82295.1| putative phage related N-acetylmuramoyl-L-alanine amidase
           [Clostridium botulinum A str. ATCC 3502]
 gi|152928055|gb|ABS33555.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152930412|gb|ABS35911.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 234

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 98  PIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           P   L         +V+ ++ +L   G      G+   F      AVK FQ    L   G
Sbjct: 162 PGYLLKYNPNRFDGNVKVIQSKLQNIGYSVGKFGVDGYFGDGTLLAVKCFQRDCNLMIDG 221

Query: 156 MVDSSTLEAM 165
           +V  +T   +
Sbjct: 222 IVGENTWNRI 231


>gi|262379111|ref|ZP_06072267.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|262298568|gb|EEY86481.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 169

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+       +   + GC+R+RN  II+L   + +  
Sbjct: 119 IYIHGTPDTEPMGIPM---SHGCIRMRNEEIIELFDLVPEQA 157


>gi|168181513|ref|ZP_02616177.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|182675396|gb|EDT87357.1| conserved hypothetical protein [Clostridium botulinum Bf]
          Length = 694

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   + I   G W        P   G++S    V  L+  L ++G  
Sbjct: 167 VYSRDTNRALIKALQVEEGITPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-- 224

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
               G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 225 IDPNGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|90418710|ref|ZP_01226621.1| conserved hypothetical protein with putative peptidoglycan-binding
            domain [Aurantimonas manganoxydans SI85-9A1]
 gi|90336790|gb|EAS50495.1| conserved hypothetical protein with putative peptidoglycan-binding
            domain [Aurantimonas manganoxydans SI85-9A1]
          Length = 1306

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  LI  G                 +A+K FQ   GL   G +D + + A+
Sbjct: 1247 AIRNIQAILIKLGY--EPGAPDGVVGQQTTAAIKAFQKEAGLTADGSIDETLIRAL 1300


>gi|259418604|ref|ZP_05742521.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
 gi|259344826|gb|EEW56680.1| ErfK/YbiS/YcfS/YnhG [Silicibacter sp. TrichCH4B]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 51/194 (26%)

Query: 163 EAMNVPVDLRIRQLQV-----NLMRIKKLLE-QKMGLRYVLVNIPAASLEAVE-NGKVGL 215
           +A    V+    Q+ V     +  + +     + +G+  +L +I + +L     +G+  +
Sbjct: 36  DAFPTTVEAIHDQVPVKRNVSSFQQQRWQDHFETLGVGCLLADIESRALHYWGGDGETYI 95

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
                V   +  T   +S+I R   NP W    ++ ++D                     
Sbjct: 96  LFPSSVPMSEELTRRGYSKIVRKRENPSWTPTANMRERD--------------------- 134

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
                             P    R + G   N + +  +         +H T +      
Sbjct: 135 ------------------PTLPRRIEGGVPNNPLGTRALYLDWP-AYLVHGTHDTRKIG- 174

Query: 335 VVRFETSGCVRVRN 348
             R  +SGC+ + N
Sbjct: 175 --RQSSSGCIGLYN 186


>gi|239905327|ref|YP_002952066.1| hypothetical protein DMR_06890 [Desulfovibrio magneticus RS-1]
 gi|239795191|dbj|BAH74180.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 380

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 28/99 (28%), Gaps = 10/99 (10%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  ++ RL   G            D     ++K +Q   GL   G    + L  ++    
Sbjct: 89  VADIQTRLAALGWYPGPA--DGKLDRMTRWSIKAYQAAEGLPQLGTATETLLAELSASPK 146

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
                L           +      + +V  P    EA E
Sbjct: 147 HAPADLA--------FPQFPKAEVHDIVLTPERLAEARE 177


>gi|308172494|ref|YP_003919199.1| hypothetical protein BAMF_0603 [Bacillus amyloliquefaciens DSM 7]
 gi|307605358|emb|CBI41729.1| Uncharacterized protein fadG [Bacillus amyloliquefaciens DSM 7]
 gi|328910596|gb|AEB62192.1| Uncharacterized protein fadG [Bacillus amyloliquefaciens LL3]
          Length = 761

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGW--PELPIR--PLHLGNSSVS-VQRLRERLIISGDL 124
            S++T      A+   + I    G   P    +   + +G++  + V+ L+  L  +   
Sbjct: 173 YSRQTNEALIYALQVEEGIAEPTGTFGPATKSKCPTISMGSTKANFVKLLQYALYCNN-- 230

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                    FD  + +A+  FQ    L   G+    T  ++ V    
Sbjct: 231 RNPGRFDGIFDENMRTALIDFQRFSALPADGVAGMQTWASLLVSKGD 277



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
            +  L+  L   G      G +  +    ++A+K FQ   GL +  G+      +A+
Sbjct: 81  QIMILQGALYCKGY--NPTGFTGTYGDGTKAAIKKFQTDAGLSNQDGIATPIIFKAL 135


>gi|256378112|ref|YP_003101772.1| peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
 gi|255922415|gb|ACU37926.1| Peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 65/207 (31%), Gaps = 11/207 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G     V  + + L   G    + P       F   V  A+K +Q + GL  +G V+ 
Sbjct: 124 EPGVKGSDVAVVMDNLAALGYTVGIRPDDDSKAEFTPRVVEALKKWQRKVGLPDTGKVEP 183

Query: 160 STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTV 219
             +  +  PV +     Q      ++L +     + V++      +   E G V   + V
Sbjct: 184 GQVLVLAGPVRVSSVTAQPGAAASEELFQVTPTGKVVVL-----QVSPTEAGAVSQGAKV 238

Query: 220 IVGRVDRQTPILH-SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           ++ R D +      S +   +           I+  +     +D   L    + +     
Sbjct: 239 LLTRPDGRDVPGTISSVGTAVSGEQGQGAGPRIEVVVTPDRDEDVADLDSAPVQVKITTE 298

Query: 279 KEVFVEEVDWNSPEP--PNFIFRQDPG 303
           +   V  V   +           Q PG
Sbjct: 299 RREGVLSVPLEALVALREGGYAVQSPG 325


>gi|254460698|ref|ZP_05074114.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
           HTCC2083]
 gi|206677287|gb|EDZ41774.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 221

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 44/169 (26%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R+      K+G  +  V+  A  L  ++     +R  V + R +   P     I R   
Sbjct: 63  QRVDARSNLKVGDIH--VDAVARYLYHIDGQGTAMRYGVAIARGNLYEP-GTFSIRRKAK 119

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++I        ++DP   + +   M                           
Sbjct: 120 WPTWTPTAAMI--------KRDPHLYEQHAEGM--------------------------- 144

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           + G  N + S  +     +R++   +H +P P       R  +SGCVR+
Sbjct: 145 NAGPSNPLGSRALYLYRGNRDSYLRIHGSPNPGSIG--GRA-SSGCVRM 190


>gi|295110292|emb|CBL24245.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus obeum A2-162]
          Length = 422

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKG---LSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L++G +   V +++E+L +  D  P+         +     ++V+ FQ   GL  +
Sbjct: 338 PGYDLNIGATGEKVLQMQEQLNVIADAYPAIPKVNADGIYGEQTSASVRKFQNVFGLPET 397

Query: 155 GMVDSSTLEAMN 166
           G+ D  T   + 
Sbjct: 398 GITDYPTWYKIQ 409


>gi|302867773|ref|YP_003836410.1| N-acetylmuramoyl-L-alanine amidase family 2 protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302570632|gb|ADL46834.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora
           aurantiaca ATCC 27029]
          Length = 377

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 13/105 (12%)

Query: 69  IISKETIAQTEKAIAF------YQDILSRGGWPELPIRPLHLGNSSVSVQRLRER--LII 120
           +    T+A  +   A           L+   W  L      L   S  V  +  +  L  
Sbjct: 266 VFDAATVAAVQDWQARNGIPVDVDATLTAPTWETLAP---ELDQKSSGVPVVAAQFMLAS 322

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            G        +  +D    +AVK  Q  HGL P+G + ++T  A+
Sbjct: 323 KGY--AEVTPTGEYDHATRTAVKDLQRLHGLPPNGKISTTTWCAL 365



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGMVDSSTLE 163
              V+  +  L   G    +  ++  FDA   +AV+ +Q R+G+       + + T E
Sbjct: 244 GPVVRVAQYLLTFRGY---TVPVTGVFDAATVAAVQDWQARNGIPVDVDATLTAPTWE 298


>gi|163867939|ref|YP_001609143.1| hypothetical protein Btr_0723 [Bartonella tribocorum CIP 105476]
 gi|161017590|emb|CAK01148.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 246

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 53/220 (24%)

Query: 145 FQMRHGLDPS-----GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           FQ    + P      G V   T +       + +  +     R + +         ++++
Sbjct: 30  FQQARYIPPEIQALYGPVTDETYQL----PAVDLATIDPKYWRQEVIYYTSYPPGTLVID 85

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
                L  +      LR  + VG+           + R    P W    +++ ++     
Sbjct: 86  TQECFLYLIGENGKALRYGIGVGKEG-LAFEGEGVVQRKRRWPNWAPTAAMMTREP---- 140

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSR 318
                                              +      PG  N + +  +  F + 
Sbjct: 141 -------------------------------ERYGHLGKGMPPGPDNPLGARALYLFKNG 169

Query: 319 NNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            +T   +H + E        R  +SGC+R+  ++IIDL  
Sbjct: 170 KDTLFRIHGSHESWSIG---RAISSGCIRLLNQDIIDLYD 206


>gi|148653252|ref|YP_001280345.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
 gi|148572336|gb|ABQ94395.1| ErfK/YbiS/YcfS/YnhG family protein [Psychrobacter sp. PRwf-1]
          Length = 178

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 6/51 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRYHIEE 370
            Y+H TP+       +   + GCVR+RN   +  WL            I +
Sbjct: 133 IYIHGTPDTEPMGVPM---SHGCVRMRNEDVI--WLFDQVQEGMPVDIIAK 178


>gi|225427844|ref|XP_002276155.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 295

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+ +  +Q +++ L   G L     S+  S  FD  +ES++K FQ  + L P+G +D+
Sbjct: 50  KKGDKTEGIQMVKKYLEHYGYLSSTHYSQMDSDDFDDTLESSLKAFQTFYHLKPTGSLDA 109

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 110 PTATLMSKP 118


>gi|157691940|ref|YP_001486402.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
 gi|157680698|gb|ABV61842.1| N-acetylmuramoyl-L-alanine amidase [Bacillus pumilus SAFR-032]
          Length = 299

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 97  LPIRPLH---LGNSSVSVQRLRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQMRH 149
           LP   +           V+ +++ L            +KG+   +     +AV  FQ+ +
Sbjct: 218 LPDGVIKVTSPLTKGEHVRLVQQALAAVYFYPDKAAANKGIDGVYGEKTANAVARFQLVN 277

Query: 150 GLDPSGMVDS 159
           GL   G+   
Sbjct: 278 GLPSDGVYGP 287


>gi|147776035|emb|CAN65266.1| hypothetical protein VITISV_040133 [Vitis vinifera]
          Length = 295

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
             G+ +  +Q +++ L   G L     S+  S  FD  +ES++K FQ  + L P+G +D+
Sbjct: 50  KKGDKTEGIQMVKKYLEHYGYLSSTHYSQMDSDDFDDTLESSLKAFQTFYHLKPTGSLDA 109

Query: 160 STLEAMNVP 168
            T   M+ P
Sbjct: 110 PTATLMSKP 118


>gi|255527321|ref|ZP_05394199.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296184916|ref|ZP_06853327.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
 gi|255508968|gb|EET85330.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296050698|gb|EFG90121.1| ErfK/YbiS/YcfS/YnhG [Clostridium carboxidivorans P7]
          Length = 233

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 308 MASTKIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRVRN 348
                + F        +H T  P          + GC+R++N
Sbjct: 95  FGGYWMGFNVPWGKYGIHGTLFPGSIGWNS---SHGCIRMKN 133



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R L  G +   V +L+  L   G    +   +  ++ Y +S V  FQ  + L  S  +
Sbjct: 164 RTLKPGMTGSDVYQLQFMLRTKGYY--NSKPNGIYNDYFKSVVHKFQKDNSLPISDTI 219


>gi|242062568|ref|XP_002452573.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
 gi|241932404|gb|EES05549.1| hypothetical protein SORBIDRAFT_04g028370 [Sorghum bicolor]
          Length = 368

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     +  L++ L   G L P       S AFD  +ESA+  +Q   GL+ +G +D+ST
Sbjct: 54  GEERQGLAGLKDYLSHFGYLPPPPPSSPFSDAFDQDLESAIATYQRNFGLNATGALDAST 113

Query: 162 LEAMNVP 168
           +  M  P
Sbjct: 114 VSQMVSP 120


>gi|49474987|ref|YP_033028.1| peptidoglycan-binding protein [Bartonella henselae str. Houston-1]
 gi|49237792|emb|CAF26986.1| Peptidoglycan-binding protein [Bartonella henselae str. Houston-1]
          Length = 418

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + L+ RL   G       +          A+K FQ+RHGL  +G      L  +  
Sbjct: 364 KELQSRLAALGYYKGE--MDGIIGTASRKALKAFQLRHGLTANGYPTPEVLSLLRK 417


>gi|254510550|ref|ZP_05122617.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221534261|gb|EEE37249.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 199

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 53/189 (28%), Gaps = 46/189 (24%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLR-YVLVNIPAASLEAVENGK-VGLRSTVIVGRVDR 226
            +  +R+       +             +LV+  + +L    + + V       V   + 
Sbjct: 42  PEPEVRRNVSGFRALDWQPYFSNTKNGAILVDTVSRALHYWSDDQSVYKLYPSSVPLTEE 101

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            T    + + R +  P W    S+         +++P++                     
Sbjct: 102 LTRRGRTSVIRKVEGPSWSPTPSMK--------KRNPEW--------------------- 132

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
                          PG  N + +  +    +    +H T +        R  ++GC+ +
Sbjct: 133 ----------PDYIPPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RRSSNGCIGL 178

Query: 347 RNIIDLDVW 355
            N  D+   
Sbjct: 179 FN-EDIAEL 186


>gi|218531762|ref|YP_002422578.1| peptidoglycan-binding protein [Methylobacterium chloromethanicum
           CM4]
 gi|218524065|gb|ACK84650.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           chloromethanicum CM4]
          Length = 233

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 47/178 (26%), Gaps = 8/178 (4%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST--------L 162
           V  ++  L+  G    S G+         +A+  FQ   GL   G+    T        +
Sbjct: 4   VAEIQRALLARGYDLGSSGVDGDAGPRTIAALTAFQRLAGLVADGIAGPRTQAVLQKADI 63

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
                  +     + V  +   K          V+     A    ++       +  +  
Sbjct: 64  SERREAPEKPGWLVLVEALNGLKEAPDVANNPQVVKLFADAGFPGIKTNSTAWCAAFVNA 123

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
            +DR        +    F  + V   +     +    R +  +     + +     + 
Sbjct: 124 VIDRAGHRGSRSLAARSFESWGVGLPAPALGAIATKKRGNSSWQGHTGLVVGANNDQV 181


>gi|326777537|ref|ZP_08236802.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657870|gb|EGE42716.1| Peptidoglycan-binding domain 1 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 358

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  R + +G+    V +L   L   G       +   +    ESAVK +Q     + 
Sbjct: 108 GPVPAFREMKVGDRGSDVLQLERNLRDLGY-GTGLYVDTEYGKDTESAVKQWQKHLNRET 166

Query: 154 SGMVDSS 160
           +G V   
Sbjct: 167 TGRVGRG 173


>gi|320107055|ref|YP_004182645.1| peptidoglycan-binding domain 1 protein [Terriglobus saanensis
           SP1PR4]
 gi|319925576|gb|ADV82651.1| Peptidoglycan-binding domain 1 protein [Terriglobus saanensis
           SP1PR4]
          Length = 262

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 98  PIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR----HG-- 150
           P   +  G+++  +V  +++RL+I G       +   + A    AV+ FQ R    +G  
Sbjct: 7   PGTTIMAGSTNKEAVTAIQKRLVIVG--CGPVDVDGKYGAETAGAVEHFQARSVDSNGTP 64

Query: 151 LDPSGMVDSSTLEAM 165
           L   G V  +T   +
Sbjct: 65  LLIDGKVGPTTWAVL 79


>gi|251795296|ref|YP_003010027.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
 gi|247542922|gb|ACS99940.1| carboxyl-terminal protease [Paenibacillus sp. JDR-2]
          Length = 472

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 96  ELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +LP    L  G+   +V+ L+  L   G      G    F+     A+  FQ  + L+ +
Sbjct: 379 QLPFGTELKTGSFGDNVKTLQLMLQELGYTPV--GDIGLFNGQTADALSRFQKDNKLEAT 436

Query: 155 GMVDSST 161
           G  +  T
Sbjct: 437 GTFNDMT 443


>gi|220922803|ref|YP_002498105.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219947410|gb|ACL57802.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 214

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 7/93 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-SRNNTY-- 322
                +  +  KG               P+    +  G  N + +  +  Y    +    
Sbjct: 106 FSWKGVATVGRKGVWPDWGPTATMVSLNPDLPRLRKGGLDNPLGARALYLYQGGRDILFR 165

Query: 323 MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
           +H T EP          +SGCVR+ N  D+   
Sbjct: 166 IHGTSEPWSIGE---QLSSGCVRMLN-EDIVDL 194


>gi|320175620|gb|EFW50712.1| L,D-transpeptidase YcfS [Shigella dysenteriae CDC 74-1112]
          Length = 137

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 308 MASTKIEFYSRNNTYM-HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRY 366
           M    I   +    Y+ H T     F   +R  +SGC+R+R+  D+     + TP     
Sbjct: 1   MGHHAIRLAAYGGVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKVN 56

Query: 367 HIEEVVK 373
            I   +K
Sbjct: 57  IINTPIK 63


>gi|260431727|ref|ZP_05785698.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415555|gb|EEX08814.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 199

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 5/97 (5%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L       +  K +              P +     PG  N + +  +    +    +H 
Sbjct: 102 LTRRGRTSVIRKVEGPSWSPTPSMKKRNPEWPDYIPPGPDNPLGTHALYLSWKY-YRIHG 160

Query: 326 TPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
           T +        R  ++GC+ + N  D+          
Sbjct: 161 THDTRKIG---RRSSNGCIGLFN-EDIAELFAMAKVG 193


>gi|182436925|ref|YP_001824644.1| hypothetical protein SGR_3132 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178465441|dbj|BAG19961.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 358

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  R + +G+    V +L   L   G       +   +    ESAVK +Q     + 
Sbjct: 108 GPVPAFREMKVGDRGSDVLQLERNLRDLGY-GTGLYVDTEYGKDTESAVKQWQKHLNRET 166

Query: 154 SGMVDSS 160
           +G V   
Sbjct: 167 TGRVGRG 173


>gi|89070990|ref|ZP_01158213.1| hypothetical protein OG2516_12501 [Oceanicola granulosus HTCC2516]
 gi|89043453|gb|EAR49668.1| hypothetical protein OG2516_12501 [Oceanicola granulosus HTCC2516]
          Length = 185

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 294 PNFIFRQDPG-KINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN- 348
             +      G   N + +  +      R+  Y +H TP+P       R  +SGC+R+ N 
Sbjct: 111 GPYRSGLPGGHPRNPLGARALYLYRGGRDTLYRIHGTPQPWTLG---RSFSSGCLRLANE 167

Query: 349 -IIDLDV 354
            I DL  
Sbjct: 168 HIEDLYD 174


>gi|224097718|ref|XP_002311052.1| predicted protein [Populus trichocarpa]
 gi|222850872|gb|EEE88419.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 113 RLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D+ST+  
Sbjct: 52  ELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLDNSTVHE 111

Query: 165 MNVP 168
           M  P
Sbjct: 112 MMQP 115


>gi|224097706|ref|XP_002311048.1| predicted protein [Populus trichocarpa]
 gi|222850868|gb|EEE88415.1| predicted protein [Populus trichocarpa]
          Length = 259

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 113 RLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D+ST+  
Sbjct: 52  ELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLDNSTVHE 111

Query: 165 MNVP 168
           M  P
Sbjct: 112 MMQP 115


>gi|167032693|ref|YP_001667924.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
 gi|166859181|gb|ABY97588.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida GB-1]
          Length = 179

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+           + GC+R+RN   L   L +  P      IE+ 
Sbjct: 118 IYLHGTPDTEPMGI---ALSHGCIRLRNTDLLS--LFERVPAHCPVRIEQA 163


>gi|196249379|ref|ZP_03148077.1| carboxyl-terminal protease [Geobacillus sp. G11MC16]
 gi|196211136|gb|EDY05897.1| carboxyl-terminal protease [Geobacillus sp. G11MC16]
          Length = 481

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +P     +   +   ++ L   G           F    E+AVK FQ  + L  +G +D 
Sbjct: 392 KPFTYDMNDEQIANAQKMLKGLGF--DPGRTDGYFSKETETAVKAFQKANKLPATGRIDE 449

Query: 160 STLEAMNVPVDLRIR 174
           +T   +   +   IR
Sbjct: 450 TTANVLQTKIMEAIR 464


>gi|138896677|ref|YP_001127130.1| putative protease [Geobacillus thermodenitrificans NG80-2]
 gi|134268190|gb|ABO68385.1| Putative protease [Geobacillus thermodenitrificans NG80-2]
          Length = 472

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +P     +   +   ++ L   G           F    E+AVK FQ  + L  +G +D 
Sbjct: 383 KPFTYDMNDEQIANAQKMLKGLGF--DPGRTDGYFSKETETAVKAFQKANKLPATGRIDE 440

Query: 160 STLEAMNVPVDLRIR 174
           +T   +   +   IR
Sbjct: 441 TTANVLQTKIMEAIR 455


>gi|255320554|ref|ZP_05361734.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
 gi|255302404|gb|EET81641.1| ErfK/YbiS/YcfS/YnhG [Acinetobacter radioresistens SK82]
          Length = 169

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+       +   + GC+R+RN  II+L   + +  
Sbjct: 119 IYIHGTPDTEPMGIPM---SHGCIRMRNEEIIELFDLIPEQA 157


>gi|224097714|ref|XP_002311050.1| predicted protein [Populus trichocarpa]
 gi|222850870|gb|EEE88417.1| predicted protein [Populus trichocarpa]
          Length = 309

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 113 RLRERLIISGDLD--------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
            L+  L   G L          +      FD  +ESA+K +Q  H L+ +G +D+ST+  
Sbjct: 52  ELKRYLEKFGYLKYGHQGKKGHNHANDDEFDDLLESAIKAYQQNHHLNVTGSLDNSTVHE 111

Query: 165 MNVP 168
           M  P
Sbjct: 112 MMQP 115


>gi|170720847|ref|YP_001748535.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
 gi|169758850|gb|ACA72166.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas putida W619]
          Length = 173

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+           + GC+R+RN   L   L +  P      IEE 
Sbjct: 118 IYLHGTPDTEPLGIP---LSHGCIRLRNTDLL--GLFERVPAHCPVRIEEA 163


>gi|188588622|ref|YP_001919517.1| spore cortex-lytic enzyme [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498903|gb|ACD52039.1| spore cortex-lytic enzyme [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 443

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+    V+ ++ +L  I     L P       F      AVK+FQ    L  +
Sbjct: 330 PDYDLTVGSVGEPVKTIQNQLNRISKNYPLIPKVAEDGIFGQTTAEAVKVFQGIFNLPQT 389

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 390 GVVDYATWYKIS 401


>gi|161170310|gb|ABX59280.1| uncharacterized protein conserved in bacteria [uncultured marine
           bacterium EB000_55B11]
 gi|297183838|gb|ADI19961.1| hypothetical protein [uncultured marine bacterium EB000_55B11]
          Length = 212

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 57/204 (27%), Gaps = 16/204 (7%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T  A        +     ++ +     +              +S  + E   V   ++  
Sbjct: 6   TRRAFTATAMSSLAVGSRSIAQEGWNPDLNNPALGFDTRQDQSSRLSGEANSVRRNASAF 65

Query: 221 VGRVDRQTPILHSRINRIMFNPY------WVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
            GR + +    +++   I+ +        W   + I +  +  +       L       I
Sbjct: 66  RGRSNWKXYFSNTKNGVILVDTQSRALHFWSEKQDIYK--LYPVAVPSSXDLTRLGRTSI 123

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFN 333
             K                P++     PG  N + S  +        Y +H T +     
Sbjct: 124 TGKRVGPDWRPTPSMLKSNPDWPSYIGPGPGNPLGSHALYLS--WTYYRIHGTHDNRKIG 181

Query: 334 NVVRFETSGCVRVRNII--DLDVW 355
              R  ++GC+ + N    +L   
Sbjct: 182 ---RRSSNGCIGLYNAQIAELFDL 202


>gi|260429562|ref|ZP_05783539.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
 gi|260420185|gb|EEX13438.1| ErfK/YbiS/YcfS/YnhG family protein [Citreicella sp. SE45]
          Length = 196

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 6/84 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MH 324
           L       +  K                P +     PG  N + +  +        Y +H
Sbjct: 99  LTRRGRTQVVLKDPSPDWRPTPSMKERNPEWPDYVGPGPDNPLGTRAMHLS--WTYYRIH 156

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GC+ + N
Sbjct: 157 GTHDTRKIG---RRSSNGCIGLYN 177


>gi|121605872|ref|YP_983201.1| peptidoglycan-binding domain-containing protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120594841|gb|ABM38280.1| Peptidoglycan-binding domain 1 protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 589

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 4/90 (4%)

Query: 94  WPELPIRP--LHLGNSSVSVQRLRERLIISGDLDPS--KGLSVAFDAYVESAVKLFQMRH 149
           W   P     L   ++   +QRL  +L +                DA + + V+ FQ   
Sbjct: 498 WRPPPGYTAGLQGASTGPVIQRLASQLALLDGAPAPLASTAPPVLDAALRARVRAFQRAQ 557

Query: 150 GLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           GL+  G     T   ++        +LQ N
Sbjct: 558 GLEADGQPGPMTFMQIDRATHADEPRLQTN 587


>gi|167517209|ref|XP_001742945.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778044|gb|EDQ91659.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1518

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 77/265 (29%), Gaps = 39/265 (14%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           + ++  +P    R L LG++   V  L+  +  +      +  S  FD   ++AV   Q 
Sbjct: 22  VEAQTSFPPPFDRVLALGDAGQDVFILQNLIRNNNQSIVLRNASAVFDNATQAAVVALQQ 81

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
             GL  +G+ D++TL  +              L ++        G            L  
Sbjct: 82  AWGLSATGVADATTLATV--------------LTQLSWDRYVDDGRPASARGYAYKILVP 127

Query: 208 VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
           V   +    +     +    T +   ++    +N            D       D     
Sbjct: 128 VHRNRSLETTAE--LQAANGTVLYRFQVRAHGYNSC-------QCDDDWPNFHND----- 173

Query: 268 DNNIHMIDEKGKEV------FVEEVDWNSPEPPNFIFRQD--PGKINAMASTKIEFYSRN 319
           +  ++M    G  V       +   + +      +   +     + NA     +    R+
Sbjct: 174 NPGLNMFTSNGNTVTGLIMADLNSPEPDPKSYGPYPINRAVQGLEGNA---AWLVPNIRD 230

Query: 320 NTYMHDTPEPILFNNVVRFETSGCV 344
              +H    P          + GC+
Sbjct: 231 GLLLHTGEWPNWSPGEPMPNSEGCM 255


>gi|114766730|ref|ZP_01445668.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114541049|gb|EAU44105.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601]
          Length = 185

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 50/187 (26%), Gaps = 48/187 (25%)

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE-NGKVGLRSTVIVGRVDRQTP 229
            R       +   +   +  +G   ++ +  + +L     +G         V   +  T 
Sbjct: 33  ARRNISSFAMQDWRDHFDA-LGKACIVCDTTSRALHFWNGDGSDYRIYPTSVPLTEELTK 91

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
             +++I R    P W    S +++                                 DW 
Sbjct: 92  RGYTKIVRKKVGPSWTPTPSQLERYP-------------------------------DWK 120

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN- 348
                       PG  N + +  +         +H T +        R  + GC+ + N 
Sbjct: 121 PIG---------PGPDNPLGTHAMYLGWPAYI-IHGTHDTRKIG---RKSSDGCIGLYNE 167

Query: 349 -IIDLDV 354
            I +L  
Sbjct: 168 KIEELFA 174


>gi|251779729|ref|ZP_04822649.1| spore cortex-lytic enzyme [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084044|gb|EES49934.1| spore cortex-lytic enzyme [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 443

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+    V+ ++ +L  I     L P       F      AVK+FQ    L  +
Sbjct: 330 PDYDLTVGSVGEPVKTIQNQLNRISKNYPLIPKVAEDGIFGQTTAEAVKVFQGIFNLPQT 389

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 390 GVVDYATWYKIS 401


>gi|332711185|ref|ZP_08431118.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349999|gb|EGJ29606.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 114

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 11/75 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------L 151
            L  G +  +V+ L++ LI    +D S  L   F +  E AV+ FQ  +          L
Sbjct: 38  VLKKGTAGEAVRFLQQFLIC--YIDYSVLLDGQFGSQTERAVRDFQSYYNSLQKSNPDYL 95

Query: 152 DPSGMVDSSTLEAMN 166
              G+V   T  A+ 
Sbjct: 96  IVDGIVGKETYRAIG 110


>gi|269217207|ref|ZP_06161061.1| penicillin-resistant DD-carboxypeptidase [Slackia exigua ATCC
           700122]
 gi|269129344|gb|EEZ60429.1| penicillin-resistant DD-carboxypeptidase [Slackia exigua ATCC
           700122]
          Length = 247

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 51/204 (25%), Gaps = 45/204 (22%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE--- 163
               V+ L+  L   G      G+   F AY E A++ FQ+  GL   G+    T +   
Sbjct: 29  QGEDVEDLQTALGALGF--SCGGVDGTFGAYTEGALRKFQVNMGLVSDGIAGVKTYDTLK 86

Query: 164 ----------------------------------AMNVPVDLRIRQLQVNLMRIKKLLEQ 189
                                                     +I     NL        +
Sbjct: 87  HLHGAWADKPTLETSSYMGFARAADVLEHHAVCLFGTGSFTRKIASYLSNLALATNPRSK 146

Query: 190 KMGLRYVLVNIPAASLEAVE-----NGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
            +    +LV +P AS+          G       V  G  +     +   I+        
Sbjct: 147 MLSAETLLV-VPDASMLLTHIVLEGEGMEEGVPRVSCGDAESLAVRVSGAIDVARKKAEE 205

Query: 245 VIPRSIIQKDMMALLRQDPQYLKD 268
             P  I  +  +    +D      
Sbjct: 206 GAPLRIAVEVSVPDAAEDSPEFDK 229


>gi|330831743|ref|XP_003291916.1| hypothetical protein DICPUDRAFT_156569 [Dictyostelium purpureum]
 gi|325077860|gb|EGC31545.1| hypothetical protein DICPUDRAFT_156569 [Dictyostelium purpureum]
          Length = 943

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 44/149 (29%), Gaps = 22/149 (14%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG----------LDPSGMVDSS 160
           V  ++  L     L     +   +D    +A+K FQ+             L   G +D  
Sbjct: 410 VMEIQAALSHLNYLPLLTKIDGMYDQKTINALKAFQVDSNKHREGSGLLLLPTEGYLDQI 469

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
           T + +       I +L   L  +   L       +   N+       +++ +      + 
Sbjct: 470 TFDEL----QEEILKLASKLESLGYTLPDNPTKNFKEFNV------IIKSFQE--TYRIY 517

Query: 221 VGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                +   +   ++N  +       P S
Sbjct: 518 PNAPGKNILLFIEKMNLKVSQTILPPPSS 546


>gi|222151317|ref|YP_002560473.1| hypothetical protein MCCL_1070 [Macrococcus caseolyticus JCSC5402]
 gi|222120442|dbj|BAH17777.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 469

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 2/85 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               L L   S  V+ +   L   G       +   FD     AV+ FQM + L   G++
Sbjct: 379 ADEVLTLNVKSTKVKSMEMGLKALGF--DPGKVDNTFDESTLYAVQSFQMENNLTVDGIM 436

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMR 182
              T +     +  +I    V L R
Sbjct: 437 TGKTTDKFMTQLAKKIENDDVQLKR 461


>gi|168187475|ref|ZP_02622110.1| lysin [Clostridium botulinum C str. Eklund]
 gi|169294640|gb|EDS76773.1| lysin [Clostridium botulinum C str. Eklund]
          Length = 257

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+ +++ L   G+      +   +      AV  FQ  +GL   G+V ++T + +
Sbjct: 198 QYGDDVKLIQKYLNKYGNYCN---IDGWYGFNTRKAVMNFQNTNGLSVDGIVGNNTWDVL 254

Query: 166 NV 167
             
Sbjct: 255 RR 256


>gi|253580852|ref|ZP_04858115.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847922|gb|EES75889.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 422

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V++++E+L  I       P       +    +++V++FQ   GLD +
Sbjct: 338 PGYDLDIGASGNKVRQIQEQLNTIAEAYPAVPVVTADGIYGPETQNSVRIFQSIFGLDQT 397

Query: 155 GMVDSSTLEAMN 166
           G+VD  T   + 
Sbjct: 398 GIVDYPTWYKIQ 409


>gi|301056644|ref|YP_003794855.1| carboxyl-terminal protease [Bacillus anthracis CI]
 gi|300378813|gb|ADK07717.1| carboxyl-terminal protease [Bacillus cereus biovar anthracis str.
           CI]
          Length = 478

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|254724391|ref|ZP_05186175.1| carboxyl-terminal protease [Bacillus anthracis str. A1055]
          Length = 465

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 376 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 433

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 434 KTAEAIQTKIIEKIRS 449


>gi|228936468|ref|ZP_04099266.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823300|gb|EEM69134.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|228948900|ref|ZP_04111173.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810656|gb|EEM57004.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229158746|ref|ZP_04286804.1| Carboxyl-terminal protease [Bacillus cereus ATCC 4342]
 gi|228624730|gb|EEK81499.1| Carboxyl-terminal protease [Bacillus cereus ATCC 4342]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229187391|ref|ZP_04314534.1| Carboxyl-terminal protease [Bacillus cereus BGSC 6E1]
 gi|228596095|gb|EEK53772.1| Carboxyl-terminal protease [Bacillus cereus BGSC 6E1]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229141909|ref|ZP_04270435.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST26]
 gi|229199298|ref|ZP_04325965.1| Carboxyl-terminal protease [Bacillus cereus m1293]
 gi|228584158|gb|EEK42309.1| Carboxyl-terminal protease [Bacillus cereus m1293]
 gi|228641524|gb|EEK97829.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST26]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|222098636|ref|YP_002532694.1| carboxyl-terminal protease [Bacillus cereus Q1]
 gi|221242695|gb|ACM15405.1| carboxyl-terminal protease [Bacillus cereus Q1]
          Length = 469

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 438 KTAEAIQTKIIEKIRS 453


>gi|192289092|ref|YP_001989697.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
 gi|192282841|gb|ACE99221.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Rhodopseudomonas palustris TIE-1]
          Length = 464

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 6/125 (4%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V+ +++RL   G  +    +   F    E A+  F+  +GL P+  VD +TL A+   
Sbjct: 298 PLVEFVQQRLRALGYYEVGN-IDGDFAGRTEDALVTFKRHNGLPPTTDVDDATLRAL-AD 355

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R    ++   R +   +    +   +     + L A   G       V+ G     +
Sbjct: 356 ASPR----EIGDARARATPKDVSKIVPAVRQAGRSKLLAWLLGAPSAAVAVLQGAAANVS 411

Query: 229 PILHS 233
            ++  
Sbjct: 412 SVMSE 416


>gi|206976835|ref|ZP_03237738.1| carboxyl- protease [Bacillus cereus H3081.97]
 gi|217962662|ref|YP_002341236.1| carboxyl-terminal protease [Bacillus cereus AH187]
 gi|206744970|gb|EDZ56374.1| carboxyl- protease [Bacillus cereus H3081.97]
 gi|217066361|gb|ACJ80611.1| carboxyl-terminal protease [Bacillus cereus AH187]
 gi|324329123|gb|ADY24383.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 478

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|118480221|ref|YP_897372.1| carboxyl-terminal protease [Bacillus thuringiensis str. Al Hakam]
 gi|118419446|gb|ABK87865.1| carboxyl-terminal protease [Bacillus thuringiensis str. Al Hakam]
          Length = 495

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 406 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 463

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 464 KTAEAIQTKIIEKIRS 479


>gi|49188018|ref|YP_031271.1| carboxyl-terminal protease [Bacillus anthracis str. Sterne]
 gi|49480386|ref|YP_039171.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|165869894|ref|ZP_02214551.1| carboxyl-terminal protease [Bacillus anthracis str. A0488]
 gi|167635276|ref|ZP_02393591.1| carboxyl-terminal protease [Bacillus anthracis str. A0442]
 gi|167640531|ref|ZP_02398794.1| carboxyl-terminal protease [Bacillus anthracis str. A0193]
 gi|170687936|ref|ZP_02879149.1| carboxyl-terminal protease [Bacillus anthracis str. A0465]
 gi|170707750|ref|ZP_02898201.1| carboxyl-terminal protease [Bacillus anthracis str. A0389]
 gi|177653015|ref|ZP_02935342.1| carboxyl-terminal protease [Bacillus anthracis str. A0174]
 gi|190567669|ref|ZP_03020581.1| carboxyl-terminal protease [Bacillus anthracis Tsiankovskii-I]
 gi|196032931|ref|ZP_03100344.1| carboxyl-terminal protease [Bacillus cereus W]
 gi|196039446|ref|ZP_03106751.1| carboxyl-terminal protease [Bacillus cereus NVH0597-99]
 gi|196045752|ref|ZP_03112982.1| carboxyl-terminal protease [Bacillus cereus 03BB108]
 gi|218906357|ref|YP_002454191.1| carboxyl-terminal protease [Bacillus cereus AH820]
 gi|225867145|ref|YP_002752523.1| carboxyl-terminal protease [Bacillus cereus 03BB102]
 gi|227817942|ref|YP_002817951.1| carboxyl-terminal protease [Bacillus anthracis str. CDC 684]
 gi|229602027|ref|YP_002869401.1| carboxyl-terminal protease [Bacillus anthracis str. A0248]
 gi|254686392|ref|ZP_05150251.1| carboxyl-terminal protease [Bacillus anthracis str. CNEVA-9066]
 gi|254735597|ref|ZP_05193304.1| carboxyl-terminal protease [Bacillus anthracis str. Western North
           America USA6153]
 gi|254744315|ref|ZP_05201995.1| carboxyl-terminal protease [Bacillus anthracis str. Kruger B]
 gi|254755613|ref|ZP_05207646.1| carboxyl-terminal protease [Bacillus anthracis str. Vollum]
 gi|254757068|ref|ZP_05209096.1| carboxyl-terminal protease [Bacillus anthracis str. Australia 94]
 gi|49181945|gb|AAT57321.1| carboxyl-terminal protease [Bacillus anthracis str. Sterne]
 gi|49331942|gb|AAT62588.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|164714217|gb|EDR19737.1| carboxyl-terminal protease [Bacillus anthracis str. A0488]
 gi|167511574|gb|EDR86957.1| carboxyl-terminal protease [Bacillus anthracis str. A0193]
 gi|167529319|gb|EDR92071.1| carboxyl-terminal protease [Bacillus anthracis str. A0442]
 gi|170127307|gb|EDS96183.1| carboxyl-terminal protease [Bacillus anthracis str. A0389]
 gi|170668045|gb|EDT18795.1| carboxyl-terminal protease [Bacillus anthracis str. A0465]
 gi|172081790|gb|EDT66860.1| carboxyl-terminal protease [Bacillus anthracis str. A0174]
 gi|190561085|gb|EDV15058.1| carboxyl-terminal protease [Bacillus anthracis Tsiankovskii-I]
 gi|195994360|gb|EDX58315.1| carboxyl-terminal protease [Bacillus cereus W]
 gi|196023583|gb|EDX62260.1| carboxyl-terminal protease [Bacillus cereus 03BB108]
 gi|196029606|gb|EDX68208.1| carboxyl-terminal protease [Bacillus cereus NVH0597-99]
 gi|218535514|gb|ACK87912.1| carboxyl-terminal protease [Bacillus cereus AH820]
 gi|225788534|gb|ACO28751.1| carboxyl-terminal protease [Bacillus cereus 03BB102]
 gi|227003396|gb|ACP13139.1| carboxyl-terminal protease [Bacillus anthracis str. CDC 684]
 gi|229266435|gb|ACQ48072.1| carboxyl-terminal protease [Bacillus anthracis str. A0248]
          Length = 478

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|52140383|ref|YP_086447.1| carboxyl-terminal protease [Bacillus cereus E33L]
 gi|51973852|gb|AAU15402.1| carboxyl-terminal protease [Bacillus cereus E33L]
          Length = 469

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 438 KTAEAIQTKIIEKIRS 453


>gi|42784334|ref|NP_981581.1| carboxyl-terminal protease [Bacillus cereus ATCC 10987]
 gi|42740265|gb|AAS44189.1| carboxyl-terminal protease [Bacillus cereus ATCC 10987]
          Length = 469

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 438 KTAEAIQTKIIEKIRS 453


>gi|30265208|ref|NP_847585.1| carboxyl-terminal protease [Bacillus anthracis str. Ames]
 gi|47530727|ref|YP_022076.1| carboxyl-terminal protease [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|30259885|gb|AAP29071.1| carboxyl-terminal protease [Bacillus anthracis str. Ames]
 gi|47505875|gb|AAT34551.1| carboxyl-terminal protease [Bacillus anthracis str. 'Ames
           Ancestor']
          Length = 469

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 438 KTAEAIQTKIIEKIRS 453


>gi|65317154|ref|ZP_00390113.1| COG0793: Periplasmic protease [Bacillus anthracis str. A2012]
 gi|228917786|ref|ZP_04081326.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228930182|ref|ZP_04093191.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229094276|ref|ZP_04225352.1| Carboxyl-terminal protease [Bacillus cereus Rock3-42]
 gi|229124688|ref|ZP_04253869.1| Carboxyl-terminal protease [Bacillus cereus 95/8201]
 gi|228658783|gb|EEL14442.1| Carboxyl-terminal protease [Bacillus cereus 95/8201]
 gi|228689129|gb|EEL42952.1| Carboxyl-terminal protease [Bacillus cereus Rock3-42]
 gi|228829467|gb|EEM75095.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228841891|gb|EEM86998.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|150376334|ref|YP_001312930.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
 gi|150030881|gb|ABR62997.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 220

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   ++     R             ++V+     L         +R  V +GR   + 
Sbjct: 40  PAIPYEKIDPRFYRQMVANPTGERPGVLVVDTANHFLYLTYEAGQAMRYGVGLGRQGFE- 98

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W  P  ++ +     L   P  + +  +                 
Sbjct: 99  WAGRGVIQYKRQWPRWTPPDEMVARQ--PELE--PYSIANGGME---------------- 138

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVR 345
                        PG  N + +  +  F +  +  Y +H +PE           +SGCVR
Sbjct: 139 -------------PGLTNPLGARALYIFQNGVDTLYRIHGSPEWWTIGKS---VSSGCVR 182

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  ++++DL   +   TP
Sbjct: 183 MINQDVVDLYNRVQNGTP 200


>gi|257438480|ref|ZP_05614235.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
 gi|257199059|gb|EEU97343.1| penicillin-resistant DD-carboxypeptidase [Faecalibacterium
           prausnitzii A2-165]
          Length = 230

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 3/84 (3%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            Y      G     P   L  G+    V  L++ L   G       +   F    E A++
Sbjct: 137 RYGTPACSGTTAGYP--TLRRGSRGCYVMILQDALSTLGY-QTGSRIDGLFGTRTEEALR 193

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            +Q R  L   G+   S+ + +  
Sbjct: 194 GYQRRTSLTVDGVCGCSSWKKITT 217


>gi|226951673|ref|ZP_03822137.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|294651354|ref|ZP_06728673.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|226837589|gb|EEH69972.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter sp. ATCC 27244]
 gi|292822756|gb|EFF81640.1| ErfK/YbiS/YcfS/YnhG family protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 176

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 5/41 (12%)

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           +   Y+H TPE       +   + GC+R++N  +I+L   +
Sbjct: 115 KRYIYIHGTPETEPMGIPM---SHGCIRMKNDEVIELFELI 152


>gi|229175852|ref|ZP_04303350.1| Carboxyl-terminal protease [Bacillus cereus MM3]
 gi|228607585|gb|EEK64909.1| Carboxyl-terminal protease [Bacillus cereus MM3]
          Length = 494

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|316936246|ref|YP_004111228.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603960|gb|ADU46495.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 215

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 61/198 (30%), Gaps = 44/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             +   QL    +R             V+V+     L  V  G   LR  V VG+   + 
Sbjct: 53  AAVEAEQLDPAYVRQLVDYRTAEPPGTVVVDPRNRFLYLVLEGGKALRYGVGVGKAGLE- 111

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + + R    P+W   R++I ++     +          +                 
Sbjct: 112 FTGTAEVGRKAEWPHWTPTRNMIAREPERYGKW------ARGME---------------- 149

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                         G+ N +    +      ++  + +H T EP          +SGC+R
Sbjct: 150 -------------GGETNPLGPRALYLYKNGKDTLFRIHGTTEPETIGK---AVSSGCIR 193

Query: 346 V--RNIIDLDVWLLKDTP 361
           +  +++IDL   + K   
Sbjct: 194 MLNQDVIDLYARVPKGAK 211


>gi|56478508|ref|YP_160097.1| hypothetical protein ebA5408 [Aromatoleum aromaticum EbN1]
 gi|56314551|emb|CAI09196.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 162

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 9/61 (14%)

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
           PG  N +         R   Y+H TP+           + GC+R+RN  II+L   +   
Sbjct: 103 PG-RNRLGDVD---SMRRYIYIHGTPDGEPMGVPR---SHGCIRMRNRDIIELFELVPVG 155

Query: 360 T 360
           T
Sbjct: 156 T 156


>gi|328472890|gb|EGF43738.1| hypothetical protein VP10329_19450 [Vibrio parahaemolyticus 10329]
          Length = 244

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 8/66 (12%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G   V V+ L+        L+        F    E++VK FQ ++GL   G+V  +
Sbjct: 179 TVRNGARGVDVRELQ--------LNLGLNADGIFGNGTEASVKAFQNKYGLSNDGIVGKN 230

Query: 161 TLEAMN 166
           T + + 
Sbjct: 231 TWKKIE 236


>gi|149912610|ref|ZP_01901144.1| hypothetical protein RAZWK3B_01440 [Roseobacter sp. AzwK-3b]
 gi|149813016|gb|EDM72842.1| hypothetical protein RAZWK3B_01440 [Roseobacter sp. AzwK-3b]
          Length = 204

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 29/137 (21%)

Query: 36  LDEIINESYHSIVNDRFDNFLARVDMGIDSDIP--IISKETIAQTEKAIA--FYQDILSR 91
           L  ++        + + +   A     + +  P  + + E   +  +A A    +  + +
Sbjct: 88  LGTVVARLCAGNRDAQVEAVTAS---ALATLAPLAVSAPEEAVELRRAEAAVRMRPSVLQ 144

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G                     ++ERLI   +L P +     +      A+  FQ   GL
Sbjct: 145 G---------------------VQERLITR-ELLPEESADGVYGEQTAKALARFQEDTGL 182

Query: 152 DPSGMVDSSTLEAMNVP 168
           +P+G+ D+ T+  + V 
Sbjct: 183 EPTGLPDAWTVFVLQVS 199


>gi|84394160|ref|ZP_00992892.1| putative general secretion pathway protein A [Vibrio splendidus
           12B01]
 gi|84375219|gb|EAP92134.1| putative general secretion pathway protein A [Vibrio splendidus
           12B01]
          Length = 556

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W +     L  G    ++  L    ++S  L      S  FD  ++  ++ FQM  G+  
Sbjct: 468 WKQPLRDTLKEGYQGEAIALLDL--LLSEVLGEDVSGSDVFDYELKMKIEAFQMWQGMSV 525

Query: 154 SGMVDSSTLEAMNVPVDLRIRQL 176
            G+    TL  +      R+ QL
Sbjct: 526 DGIAGKRTLARL-----QRLAQL 543


>gi|186682808|ref|YP_001866004.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186465260|gb|ACC81061.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 223

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 7/66 (10%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+    V+ ++  L        +  +   +     + V+ FQ   GL   G V   T
Sbjct: 165 LTRGSRGQLVRDVQTAL-------GNLRVDGIYGQETVNQVRSFQASKGLLVDGTVGPET 217

Query: 162 LEAMNV 167
             A+ +
Sbjct: 218 RAALGI 223


>gi|302876664|ref|YP_003845297.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687339|ref|ZP_07629785.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579521|gb|ADL53533.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 444

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 3/88 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++   V+ ++  L  I +     P   +S  +D    + V+ FQ    L P+
Sbjct: 329 PGYTLGIGSTGQPVRTVQTFLNRIATNYPALPKVAVSGNYDVNTAAMVRKFQEVFNLQPT 388

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           G+VD ST  A++       +  ++   R
Sbjct: 389 GVVDYSTWYAISRIYVAVTKIAELREER 416


>gi|240139156|ref|YP_002963631.1| hypothetical protein MexAM1_META1p2578 [Methylobacterium extorquens
           AM1]
 gi|240009128|gb|ACS40354.1| conserved hypothetical protein precursor, ErfK/YbiS/YcfS/YnhG
           family protein [Methylobacterium extorquens AM1]
          Length = 290

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 20/82 (24%)

Query: 288 WNSPEPPNFIFRQDP------------GKINAMASTKIEF--YSRNNTY-MHDTPEPILF 332
           W    P   + R+DP            G  N + +  +      ++  Y +H T EP   
Sbjct: 128 WPRWTPTPDMIRRDPKRYEPWAGGMAGGDRNPLGARALYLFKDGKDTLYRIHGTTEPWSI 187

Query: 333 NNVVRFETSGCVRV--RNIIDL 352
                  +SGC+R+  +++IDL
Sbjct: 188 GE---AVSSGCIRMLNQDVIDL 206


>gi|291451766|ref|ZP_06591156.1| predicted protein [Streptomyces albus J1074]
 gi|291354715|gb|EFE81617.1| predicted protein [Streptomyces albus J1074]
          Length = 301

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +   +   V+ AV+ FQ    +   G+V   T   +  
Sbjct: 261 PGAVDGLYGPVVQEAVRRFQAARRIPVDGVVGPDTWGELRR 301


>gi|168209801|ref|ZP_02635426.1| spore cortex-lytic enzyme SleC [Clostridium perfringens B str. ATCC
           3626]
 gi|170712125|gb|EDT24307.1| spore cortex-lytic enzyme SleC [Clostridium perfringens B str. ATCC
           3626]
          Length = 438

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQM 147
           +G     P   L +G S   V+ ++E+L        L P   +   +      +V+ FQ 
Sbjct: 322 QGSPRSFPGYTLGIGASGQPVRVIQEQLNAISKAYPLIPKVAVDGKYGQKTRDSVRTFQK 381

Query: 148 RHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
              L  +G VD +T  +  +V V +       + +  K      +  RY  V  
Sbjct: 382 VFNLPQTGEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPK 435


>gi|148379399|ref|YP_001253940.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931814|ref|YP_001383776.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|153936376|ref|YP_001387326.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
 gi|148288883|emb|CAL82968.1| putative N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum
           A str. ATCC 3502]
 gi|152927858|gb|ABS33358.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           ATCC 19397]
 gi|152932290|gb|ABS37789.1| N-acetylmuramoyl-L-alanine amidase [Clostridium botulinum A str.
           Hall]
          Length = 275

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 9/99 (9%)

Query: 68  PIISKETIAQTEKAI-AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
           P  SK      +  +       +SR G+   P      G      + +++ LI  G    
Sbjct: 180 PSTSKPVQTNKKHTLINQLYAEMSRQGFNTFPAC--RQGARGNITKIIQQMLINIGYTVG 237

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S      F      AVK FQ    L    +V   T +A+
Sbjct: 238 S------FGNSTVMAVKSFQRDCNLSADVLVGKETWKAL 270


>gi|110801016|ref|YP_697249.1| spore cortex-lytic enzyme SleC [Clostridium perfringens ATCC 13124]
 gi|110675663|gb|ABG84650.1| spore cortex-lytic enzyme SleC [Clostridium perfringens ATCC 13124]
          Length = 438

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQM 147
           +G     P   L +G S   V+ ++E+L        L P   +   +      +V+ FQ 
Sbjct: 322 QGSPRSFPGYTLGIGASGQPVRVIQEQLNAISKAYPLIPKVAVDGKYGQKTRDSVRTFQK 381

Query: 148 RHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
              L  +G VD +T  +  +V V +       + +  K      +  RY  V  
Sbjct: 382 VFNLPQTGEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPK 435


>gi|282934018|ref|ZP_06339304.1| peptidoglycan binding domain protein [Lactobacillus jensenii 208-1]
 gi|281301914|gb|EFA94172.1| peptidoglycan binding domain protein [Lactobacillus jensenii 208-1]
          Length = 311

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 10/100 (10%)

Query: 74  TIAQTEKAIAFYQDILSRG-GWPELPIRPL-------HLGNSSVSVQRLRERLIISGDLD 125
           TI    + +     I + G G+       L         G S   V+ ++      G   
Sbjct: 35  TIYSLREGLQHELGISALGEGFGSSTKAALSNIINKIRPGYSGNIVKLIKGAFWCKG--I 92

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                S ++ + + +AVK  Q   G+   G++    + A+
Sbjct: 93  NPTDFSASYGSELTNAVKTLQSDAGITADGILTVQLMAAL 132


>gi|239831423|ref|ZP_04679752.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239823690|gb|EEQ95258.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 238

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 58/198 (29%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V      +R  V +GR     
Sbjct: 74  PAIPIQKMDKRFLRQVVQDPTGELPGTIVIDTANRFCYLVLENGQAMRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SAKNGGM-----APGLKNPLGARALYIFQDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +    P
Sbjct: 217 FLNQDIIDLYDRVPAKAP 234


>gi|256851783|ref|ZP_05557171.1| YbfG [Lactobacillus jensenii 27-2-CHN]
 gi|260661955|ref|ZP_05862865.1| YbfG [Lactobacillus jensenii 115-3-CHN]
 gi|297205404|ref|ZP_06922800.1| YbfG like protein [Lactobacillus jensenii JV-V16]
 gi|256615741|gb|EEU20930.1| YbfG [Lactobacillus jensenii 27-2-CHN]
 gi|260547424|gb|EEX23404.1| YbfG [Lactobacillus jensenii 115-3-CHN]
 gi|297149982|gb|EFH30279.1| YbfG like protein [Lactobacillus jensenii JV-V16]
          Length = 709

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 10/100 (10%)

Query: 74  TIAQTEKAIAFYQDILSRG-GWPELPIRPL-------HLGNSSVSVQRLRERLIISGDLD 125
           TI    + +     I + G G+       L         G S   V+ ++      G   
Sbjct: 35  TIYSLREGLQHELGISALGEGFGSSTKAALSNIINKIRPGYSGNIVKLIKGAFWCKG--I 92

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                S ++ + + +AVK  Q   G+   G++    + A+
Sbjct: 93  NPTDFSASYGSELTNAVKTLQSDAGITADGILTVQLMAAL 132


>gi|182624290|ref|ZP_02952075.1| spore cortex-lytic enzyme SleC [Clostridium perfringens D str.
           JGS1721]
 gi|177910508|gb|EDT72881.1| spore cortex-lytic enzyme SleC [Clostridium perfringens D str.
           JGS1721]
          Length = 438

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQM 147
           +G     P   L +G S   V+ ++E+L        L P   +   +      +V+ FQ 
Sbjct: 322 QGSPRSFPGYTLGIGASGQPVRVIQEQLNAISKAYPLIPKVAVDGKYGQKTRDSVRTFQK 381

Query: 148 RHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
              L  +G VD +T  +  +V V +       + +  K      +  RY  V  
Sbjct: 382 VFNLPQTGEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPK 435


>gi|168217325|ref|ZP_02642950.1| spore cortex-lytic enzyme SleC [Clostridium perfringens NCTC 8239]
 gi|182380585|gb|EDT78064.1| spore cortex-lytic enzyme SleC [Clostridium perfringens NCTC 8239]
          Length = 438

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 4/114 (3%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQM 147
           +G     P   L +G S   V+ ++E+L        L P   +   +      +V+ FQ 
Sbjct: 322 QGSPRSFPGYTLGIGASGQPVRVIQEQLNAISKAYPLIPKVAVDGKYGQKTRDSVRTFQK 381

Query: 148 RHGLDPSGMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
              L  +G VD +T  +  +V V +       + +  K      +  RY  V  
Sbjct: 382 VFNLPQTGEVDYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPK 435


>gi|228984111|ref|ZP_04144297.1| peptidoglycan binding domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775639|gb|EEM24019.1| peptidoglycan binding domain protein [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 739

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 52/163 (31%), Gaps = 15/163 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           I    L++    +     D  + +    + N  +     +   G         + T    
Sbjct: 139 IFKAFLTMDAYRLTPGG-DAKVRQIQQDLNNKYYKTSGVQPTDG------HYQRGTNKAL 191

Query: 79  EKAIAFYQDILSRGGWPEL-PIRP-----LHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
              +     I +      + P        L +G+S   V   +  L  +G    S   S 
Sbjct: 192 VFGLQTEMGIAAGSQTGSIGPATKNGLPILKVGSSGRFVTLFQYALYFNGH--DSGSFST 249

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            ++A VES VK FQ    L   G+ + ST  +  V      R+
Sbjct: 250 TYNANVESTVKKFQGFTLLPVDGVANKSTWLSALVSTGDPDRK 292


>gi|332711166|ref|ZP_08431099.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
 gi|332349980|gb|EGJ29587.1| putative peptidoglycan-binding domain-containing protein [Lyngbya
           majuscula 3L]
          Length = 108

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------L 151
            L  G +  +V+ L++ LI    +  S      F +  E AV+ FQ  +          L
Sbjct: 32  VLKKGTAGEAVRFLQQLLIC--YMGYSLVFDGQFGSQTEQAVRDFQSYYNSLYKSNPDYL 89

Query: 152 DPSGMVDSSTLEAMN 166
              G+V   T  A+ 
Sbjct: 90  IVDGIVGKETYRAIG 104


>gi|239979911|ref|ZP_04702435.1| hypothetical protein SalbJ_10752 [Streptomyces albus J1074]
          Length = 270

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +   +   V+ AV+ FQ    +   G+V   T   +  
Sbjct: 230 PGAVDGLYGPVVQEAVRRFQAARRIPVDGVVGPDTWGELRR 270


>gi|152977293|ref|YP_001376810.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152026045|gb|ABS23815.1| ErfK/YbiS/YcfS/YnhG family protein [Bacillus cytotoxicus NVH
           391-98]
          Length = 156

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 24/99 (24%), Gaps = 13/99 (13%)

Query: 269 NNIHMIDEKGKEVFVEE--VDWNSPEPPNFIF--RQDPGKINAMASTKIEFYS----RNN 320
            N  +   K          +  N  +   +     +     N +    +           
Sbjct: 52  RNFTVATGKSTTPTPTGSFIIVNKIKNRPYYTGHIKGGDPRNPLGDRWLGLNMAGTWGTT 111

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
             +H T             T GC+R+ N      WL + 
Sbjct: 112 YAIHGTNNNQAIGKST---TLGCIRMYNND--IHWLFEQ 145


>gi|229522795|ref|ZP_04412209.1| VgrG protein [Vibrio cholerae TM 11079-80]
 gi|229340012|gb|EEO05020.1| VgrG protein [Vibrio cholerae TM 11079-80]
          Length = 1050

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 22/133 (16%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQ-----TEKAIAFYQDILSRGGWPELPIRPLHL 104
                 +        +D P+  ++T  +       K     + +  R             
Sbjct: 674 ASLPTMIPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQ------ASAYRQ 727

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-----------LDP 153
           GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +               
Sbjct: 728 GNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGAV 787

Query: 154 SGMVDSSTLEAMN 166
            G+V   TL A++
Sbjct: 788 DGIVGKGTLLALD 800


>gi|153010025|ref|YP_001371240.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561913|gb|ABS15411.1| ErfK/YbiS/YcfS/YnhG family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 238

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 42/198 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + I+++    +R             ++++        V      +R  V +GR     
Sbjct: 74  PAIPIQKMDKRFLRQVVQDPTGELPGTLVIDTANRFCYLVLENGQAMRYGVGIGREGFA- 132

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I      P W  P  ++ +                              E V +
Sbjct: 133 WSGRAVIQYKRQWPRWTPPDEMVARQ----------------------------PELVQY 164

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++           PG  N + +  +      ++  Y +H  PE           +SGCVR
Sbjct: 165 SARNGGM-----APGLKNPLGARALYIFQDGKDTLYRLHGNPEWWSIGK---AVSSGCVR 216

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   +P
Sbjct: 217 FLNQDIIDLYDRVPAKSP 234


>gi|83956109|ref|ZP_00964591.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
 gi|83839675|gb|EAP78854.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Sulfitobacter sp. NAS-14.1]
          Length = 217

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 62/205 (30%), Gaps = 48/205 (23%)

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGK 212
           +G   + T E  +    +R      +    ++     +    +L +I + +++   E+  
Sbjct: 48  TGTAIAQTTEPFS-SPSVRRNISSFSTSNWREHF-DNLEHGAILCDIDSRAVQYWSEDES 105

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V       V   +  T   ++ + R +  P W    S+          ++P++       
Sbjct: 106 VYKLYPSSVPLTEELTKRGNTHVIRKVEGPSWRPTPSMKI--------RNPEW------- 150

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILF 332
                                        PG  N + +  +    +    +H T +    
Sbjct: 151 ------------------------PDYFPPGPDNPLGTHALYLSWQY-YRVHGTGDTRKI 185

Query: 333 NNVVRFETSGCVRVRN--IIDLDVW 355
               R  ++GC+ + N  I +L   
Sbjct: 186 G---RQSSNGCIGLYNEHIKELFAL 207


>gi|90420723|ref|ZP_01228629.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335014|gb|EAS48775.1| putative peptidoglycan-binding protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 284

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 64  DSDIPIISKETIA-QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
             + P   +     +   A+   + +L  G  P      L  G     V+RL+  L+  G
Sbjct: 178 RYNGPAYRRNRYDEKIAAALHKARSLL--GTDPA--TGELRRGARGDHVRRLQGSLVAHG 233

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                  +   F    E+A+  FQ  HGL  S   D++T+  + V    
Sbjct: 234 ---HRLVVDGIFGPGTEAALTSFQAAHGLPVSAAADAATMARLGVSAKP 279


>gi|330502556|ref|YP_004379425.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
 gi|328916842|gb|AEB57673.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina NK-01]
          Length = 175

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 9/70 (12%)

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTP 361
           PG  N M         R   Y+H TP+           + GC+R+RN   L   L    P
Sbjct: 103 PG-RNRMGEVD---TFRRYIYLHGTPDTEPMGEP---LSHGCIRLRNTDMLA--LFDRVP 153

Query: 362 TWSRYHIEEV 371
              +  I E 
Sbjct: 154 LNCKVRIGEA 163


>gi|311695152|gb|ADP98025.1| ErfK/YbiS/YcfS/YnhG family protein [marine bacterium HP15]
          Length = 164

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            Y+H TP+           + GCVR+RN    DL   +   T
Sbjct: 121 IYIHGTPDSEPMGVP---LSHGCVRMRNADIIDLFDRVRPGT 159


>gi|295104691|emb|CBL02235.1| Putative peptidoglycan-binding domain-containing protein
           [Faecalibacterium prausnitzii SL3/3]
          Length = 230

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L++ L   G       +   F A  E A++ +Q R  L   G+    
Sbjct: 152 TLRRGSRGCYVMILQDALSTLGY-QTGSRIDGIFGARTEQALRGYQKRTSLRVDGVCGCD 210

Query: 161 TLEAMNV 167
           + + ++ 
Sbjct: 211 SWKKIST 217


>gi|282892109|ref|ZP_06300584.1| hypothetical protein pah_c207o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498004|gb|EFB40348.1| hypothetical protein pah_c207o039 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 206

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 26/183 (14%)

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR------ 226
              L    +     L+Q +    ++V++ +  L    + K+     +             
Sbjct: 22  ANSLPKQFLDKMAELKQPLTRHVIVVDVTSQKLFLYNDHKIVTSYPISTSSKGTGQESNS 81

Query: 227 -QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE 285
            +TP+   RI   +       P + I  +     R++   +      +   K ++V +  
Sbjct: 82  YKTPLGAHRIAEKI---GQNAPINAIFVE-----RKNTGKIWS---PLPKGKREKVDLVL 130

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                 E     F Q  GK      +   F  +   Y+H T    L        + GC+R
Sbjct: 131 TRILWLEGLEKGFNQGIGKG---GKSVDSF--QRYIYIHGTNAEDLIGTP---ASKGCIR 182

Query: 346 VRN 348
           ++N
Sbjct: 183 MKN 185


>gi|297545248|ref|YP_003677550.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296843023|gb|ADH61539.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 420

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V   T   
Sbjct: 45  GTYGTDVKELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKTYAV 102

Query: 165 MNV 167
           +  
Sbjct: 103 LET 105


>gi|167465780|ref|ZP_02330869.1| hypothetical protein Plarl_24988 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 488

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 21/131 (16%)

Query: 247 PRSIIQKDMMALLRQDPQY-------LKDNNIHMIDEKGKEVFVE-EVDWNSPEPPNFIF 298
           P   +   +     +D  +       +      +    G  +     V     + P+  F
Sbjct: 321 PAKWLATSVKPEHAEDQLFEEPLRIVVDRRAYRLAVISGNTIIRTFPVGLGGEKTPDGEF 380

Query: 299 ------RQDPGKINA-MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
                 R   GK N    S  +         +H T EP          + GC+R+   ++
Sbjct: 381 TITEKVRNPNGKSNGEFGSRGMTLSDT-LYAIHGTNEPDSIGQDE---SKGCIRMGKEDV 436

Query: 350 IDLDVWLLKDT 360
            +L   +  +T
Sbjct: 437 EELFDLVPLET 447


>gi|160943095|ref|ZP_02090332.1| hypothetical protein FAEPRAM212_00574 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445564|gb|EDP22567.1| hypothetical protein FAEPRAM212_00574 [Faecalibacterium prausnitzii
           M21/2]
          Length = 230

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L++ L   G       +   F A  E A++ +Q R  L   G+    
Sbjct: 152 TLRRGSRGCYVMILQDALSTLGY-QTGSRIDGIFGARTEQALRGYQKRTSLRVDGVCGCD 210

Query: 161 TLEAMNV 167
           + + ++ 
Sbjct: 211 SWKKIST 217


>gi|332978479|gb|EGK15191.1| glutamate 5-kinase [Psychrobacter sp. 1501(2011)]
          Length = 100

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 6/47 (12%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD-TPTWSRY 366
            Y+H TP+           + GCVR+RN   L  WL           
Sbjct: 55  IYIHGTPDSEPMGIP---LSHGCVRMRNEDLL--WLFDQVDEGVPVE 96


>gi|149204351|ref|ZP_01881318.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. TM1035]
 gi|149142236|gb|EDM30283.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. TM1035]
          Length = 201

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 47/197 (23%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQ-KMGLRYVLVNIPAASLEAVE-NGK 212
           G+  + T+E      +  +R+       +        +    +LV+I + ++     +  
Sbjct: 30  GVDGADTVELERGLEEETVRRNISGFRMLDWRPYFSNLNNGAILVDIDSRAVHFWSADQS 89

Query: 213 VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIH 272
           V       V   D  T    + + + +  P W    S+        L+++P++       
Sbjct: 90  VYKLYPSSVPLTDDLTRRGRTSVVQKVEGPSWRPTPSM--------LKRNPEW------- 134

Query: 273 MIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPIL 331
                                        PG  N + +  +        Y +H T +   
Sbjct: 135 ------------------------PAFVPPGPDNPLGTHALYLS--WTYYRIHGTHDTRK 168

Query: 332 FNNVVRFETSGCVRVRN 348
                R  ++GCV + N
Sbjct: 169 IG---RRSSNGCVGLYN 182


>gi|314936435|ref|ZP_07843782.1| carboxyl- protease [Staphylococcus hominis subsp. hominis C80]
 gi|313655054|gb|EFS18799.1| carboxyl- protease [Staphylococcus hominis subsp. hominis C80]
          Length = 489

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +   +G+++ +V+ ++  L   G    +   S  FD  + + +KLFQ  + L  +G  
Sbjct: 401 SDKTYSVGDNNKNVKSIKIGLDALGYY--NGDESNQFDNQLANTIKLFQSNNQLSETGKF 458

Query: 158 DSST 161
           D+ T
Sbjct: 459 DTKT 462


>gi|228476033|ref|ZP_04060741.1| carboxy- processing proteinase [Staphylococcus hominis SK119]
 gi|228269856|gb|EEK11336.1| carboxy- processing proteinase [Staphylococcus hominis SK119]
          Length = 489

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +   +G+++ +V+ ++  L   G    +   S  FD  + + +KLFQ  + L  +G  
Sbjct: 401 SDKTYSVGDNNKNVKSIKIGLDALGYY--NGDESNQFDNQLANTIKLFQSNNQLSETGKF 458

Query: 158 DSST 161
           D+ T
Sbjct: 459 DTKT 462


>gi|294675987|ref|YP_003576602.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
 gi|294474807|gb|ADE84195.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter capsulatus SB 1003]
          Length = 282

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 57/202 (28%), Gaps = 14/202 (6%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPA-ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
             N   ++ +  +          +PA   +   E  +            D      ++R+
Sbjct: 30  AANAPALRGVPPEYQARPDGERVVPAVNPVYLTERNRRRWVEYAGPEGKDTIVIDPYARV 89

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
              +  P   +   I         R            +         +   D        
Sbjct: 90  LYHVVEPGKAMRFGIAVG---KAGRGFSGAAVVGRKEIYPSWQPTARMVRADPALY--GP 144

Query: 296 FIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                D G  N + +  +      R+  Y +H T +P          ++GC+R+ N  D+
Sbjct: 145 LAGGLDGGLDNPLGARALYLYRNGRDTYYRIHGTMDPSSIGK---ATSAGCIRLFN-QDI 200

Query: 353 DVWLLKDTPTWSRYHIEEVVKT 374
              +  + P  +R  +  + ++
Sbjct: 201 ID-MFDEAPLGTRVKVRSLAES 221


>gi|311696248|gb|ADP99121.1| peptidoglycan binding domain protein [marine bacterium HP15]
          Length = 416

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            ++  L++ L   G    +            SA++ FQ  + L   G    S L A+ +P
Sbjct: 356 ANIINLQKALQQRGYEPGNP--DGIMGPATRSAIRQFQAANNLVADGYPGESVLAALEIP 413

Query: 169 VDL 171
              
Sbjct: 414 AGQ 416


>gi|193212428|ref|YP_001998381.1| peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085905|gb|ACF11181.1| Peptidoglycan-binding domain 1 protein [Chlorobaculum parvum NCIB
           8327]
          Length = 616

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 4/69 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGMVDS 159
           L  G+    V  ++++L   G       +   F      A+  FQ          G+V  
Sbjct: 234 LRFGSQGELVHVIQQKLSARGFY--EGKIDSDFGLRTLQALLDFQTAEFGPSEDDGIVGP 291

Query: 160 STLEAMNVP 168
            T  A+ + 
Sbjct: 292 QTASALAID 300


>gi|169830630|ref|YP_001716612.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637474|gb|ACA58980.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 266

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 48/186 (25%), Gaps = 45/186 (24%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
           +      K G   +++N  A  L   + G++ +  +V  G+    TP     +   +   
Sbjct: 125 LAVYPRPKSGGDRIIINKSANRLYFYQGGELAVIYSVATGKRPEYTPEGTFTVVNKVS-- 182

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
                                          +           + W     P    R+  
Sbjct: 183 -------------------------------LPGDNDSDPRFGLRWLGLAVPCEKDRRRE 211

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
               A    K          +H T EP          + GCVR+RN  D+       T  
Sbjct: 212 NDPRAPGGIK--------YGIHGTNEPDSIGT---HASGGCVRLRN-EDIVELFELVTVG 259

Query: 363 WSRYHI 368
            +   I
Sbjct: 260 TTVDII 265


>gi|154685104|ref|YP_001420265.1| YkuG [Bacillus amyloliquefaciens FZB42]
 gi|154350955|gb|ABS73034.1| YkuG [Bacillus amyloliquefaciens FZB42]
          Length = 761

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGW--PELPIR--PLHLGNSSVS-VQRLRERLIISGDL 124
            S++T      A+   + I    G   P    +   + +G++  + V+ L+  L  +   
Sbjct: 173 YSRQTNEALIYALQVEEGIAEPTGTFGPATKSKCPTISMGSTKANFVKLLQYALYCNN-- 230

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                    FD  + +A+  FQ    L   G+    T  ++ V    
Sbjct: 231 RNPGRFDGIFDENMRTALINFQKFSALPADGVAGMQTWASLLVSKGD 277



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
            +  L+  L   G      G +  +    ++A+K FQ   GL +  G+      +A+
Sbjct: 81  QIMILQGALYCKGY--NPTGFTGTYGDGTKAAIKKFQTDAGLSNQDGIATPIIFKAL 135


>gi|50084010|ref|YP_045520.1| hypothetical protein ACIAD0795 [Acinetobacter sp. ADP1]
 gi|49529986|emb|CAG67698.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 167

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRYH 367
            Y+H TP+       +   + GC+R+RN  +I+L   + +    +    
Sbjct: 117 IYIHGTPDTEPMGIAM---SHGCIRMRNRDVIELFDLVPEYALVYLSEQ 162


>gi|84503182|ref|ZP_01001267.1| hypothetical protein OB2597_16507 [Oceanicola batsensis HTCC2597]
 gi|114762597|ref|ZP_01442041.1| hypothetical protein 1100011001314_R2601_07093 [Pelagibaca
           bermudensis HTCC2601]
 gi|84388423|gb|EAQ01372.1| hypothetical protein OB2597_16507 [Oceanicola batsensis HTCC2597]
 gi|114544852|gb|EAU47857.1| hypothetical protein R2601_07093 [Roseovarius sp. HTCC2601]
          Length = 90

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 9/66 (13%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN--TY--MHDTPEPILFNNVVRFETSGCVRVRN-- 348
            +      G  N + +  +  Y      TY  +H T  P    +     ++GC R+ N  
Sbjct: 11  KYKDGLKGGPNNPLGARALYLYDAEGRDTYLRIHGTNAPETIGS---AVSNGCARLTNEH 67

Query: 349 IIDLDV 354
           + DL  
Sbjct: 68  VKDLYE 73


>gi|319898490|ref|YP_004158583.1| hypothetical protein BARCL_0314 [Bartonella clarridgeiae 73]
 gi|319402454|emb|CBI75995.1| conserved exported protein of unknown function [Bartonella
           clarridgeiae 73]
          Length = 229

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 10/107 (9%)

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ--DPGKINAMASTKIEF--Y 316
           ++        I     +       +              Q   PG  N + +        
Sbjct: 110 KEGLAFTGVGIIQYKRRWPSWAPTKKMMEREPERYGHLAQGMPPGPENPLGARAFYLFKD 169

Query: 317 SRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
            ++  + +H + E        R  +SGC+R+  ++IIDL   +   +
Sbjct: 170 GKDTLFRIHGSHEAWSIG---RAISSGCIRLLNQDIIDLYNRVPDGS 213


>gi|56697068|ref|YP_167431.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
 gi|56678805|gb|AAV95471.1| ErfK/YbiS/YcfS/YnhG family protein [Ruegeria pomeroyi DSS-3]
          Length = 216

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 51/171 (29%), Gaps = 46/171 (26%)

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
           + +G+  +L +I + ++               V   +  T   ++ + R   NP W    
Sbjct: 80  ETLGVGCLLADISSRAVHYWGADGSYKLYPSSVPMTEELTRRGYTEVVRKTVNPSWTPTA 139

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK-INA 307
           S+ ++D                                       P    R + G+  N 
Sbjct: 140 SMRERD---------------------------------------PTLPVRMEGGEVGNP 160

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
           + +  +         +H T +        R  +SGC+ + N  + +L   +
Sbjct: 161 LGTRAMYLTWP-AYLVHGTHDTRKIG---RQSSSGCIGLYNQHVEELYELV 207


>gi|120554854|ref|YP_959205.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
 gi|120324703|gb|ABM19018.1| ErfK/YbiS/YcfS/YnhG family protein [Marinobacter aquaeolei VT8]
          Length = 166

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            Y+H TP+           + GC+R+RN  I++L   +   TP
Sbjct: 123 IYIHGTPDSEPMGV---ARSHGCIRMRNTDIVELFDRVPAGTP 162


>gi|322384184|ref|ZP_08057894.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151076|gb|EFX44393.1| murein transglycosylase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 500

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 21/131 (16%)

Query: 247 PRSIIQKDMMALLRQDPQY-------LKDNNIHMIDEKGKEVFVE-EVDWNSPEPPNFIF 298
           P   +   +     +D  +       +      +    G  +     V     + P+  F
Sbjct: 333 PAKWLATSVKPEHAEDQLFEEPLRIVVDRRAYRLAVISGNTIIRTFPVGLGGEKTPDGEF 392

Query: 299 ------RQDPGKINA-MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
                 R   GK N    S  +         +H T EP          + GC+R+   ++
Sbjct: 393 TITEKVRNPNGKSNGEFGSRGMTLSDT-LYAIHGTNEPDSIGQDE---SKGCIRMGKEDV 448

Query: 350 IDLDVWLLKDT 360
            +L   +  +T
Sbjct: 449 EELFDLVPLET 459


>gi|322806537|emb|CBZ04106.1| lysozyme [Clostridium botulinum H04402 065]
          Length = 340

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           ++++ L+  G    + G+         +A+K FQ    L  +G VD+ T   +    + +
Sbjct: 204 QIQKMLVTIGYPIGNSGIDGIIGNGTITAIKAFQKDCNLTVTGNVDTKTWNKLEQEYNKK 263

Query: 173 IRQLQVNLMRIK 184
           +     N     
Sbjct: 264 LGIKPNNKEEFD 275


>gi|323136345|ref|ZP_08071427.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322398419|gb|EFY00939.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 187

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 44/176 (25%), Gaps = 44/176 (25%)

Query: 181 MRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
            R        +    ++++     L  V    V +   V V +  ++     + ++    
Sbjct: 41  ARNMVAFSPDVQPGTIVISAHQRRLFYVVGPGVAISYPVAVPKRGKE-WSGVTSVDGKYV 99

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
           NP W  P ++                                         + P      
Sbjct: 100 NPDWTPPAAV---------------------------------------KADHPELPNLI 120

Query: 301 DPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
             G   N M    +         +H T   +  +      + GC+R+ N  D+   
Sbjct: 121 PGGSPRNPMGVAALTLDRGE-VAIHGTTSKMRASIGT-AASYGCIRMLN-EDVADL 173


>gi|295401143|ref|ZP_06811116.1| carboxyl-terminal protease [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294976736|gb|EFG52341.1| carboxyl-terminal protease [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 480

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    ++  V+  ++ L   G           F    E+AVK FQ  + L P+G +D 
Sbjct: 391 KALSFDMNNEQVKNAQQMLKGIGF--DPGRTDGYFSKETEAAVKAFQKANKLPPTGKIDK 448

Query: 160 STLEAMNVPVDLRIR 174
           +T + +   V   IR
Sbjct: 449 NTADVLQAKVMDAIR 463


>gi|27381722|ref|NP_773251.1| amidase [Bradyrhizobium japonicum USDA 110]
 gi|27354891|dbj|BAC51876.1| amidase [Bradyrhizobium japonicum USDA 110]
          Length = 286

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 8/77 (10%)

Query: 92  GGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W    P +    L LG  S  V  L++ L   G       L+  +DA     V  FQ 
Sbjct: 195 GHWVTPTPVVRGESLMLGTISDEVLSLQQALARYGY---GVPLTGKYDAATMEVVTAFQR 251

Query: 148 RHG-LDPSGMVDSSTLE 163
                   G+ D STL 
Sbjct: 252 HFRPARLDGVADHSTLS 268


>gi|294501799|ref|YP_003565499.1| C-terminal processing peptidase [Bacillus megaterium QM B1551]
 gi|295707148|ref|YP_003600223.1| C-terminal processing peptidase [Bacillus megaterium DSM 319]
 gi|294351736|gb|ADE72065.1| C-terminal processing peptidase [Bacillus megaterium QM B1551]
 gi|294804807|gb|ADF41873.1| C-terminal processing peptidase [Bacillus megaterium DSM 319]
          Length = 479

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 2/80 (2%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           ++  +PL    +   V+  +  L   G           F    E+AV  FQ  +    +G
Sbjct: 386 QVDKKPLTRDMTGDQVKNAQVMLKGLGF--EPGRTDGYFSKETETAVTAFQKANKQKATG 443

Query: 156 MVDSSTLEAMNVPVDLRIRQ 175
            +D  T   +   +  +I+ 
Sbjct: 444 EIDEDTAALLQTKLLEKIKS 463


>gi|226943571|ref|YP_002798644.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
 gi|226718498|gb|ACO77669.1| ErfK/YbiS/YcfS/YnhG family protein [Azotobacter vinelandii DJ]
          Length = 172

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+           + GCVR+RN   L   L    P   R  IEE 
Sbjct: 116 IYLHGTPDSEPMGVPR---SHGCVRLRNADLL--ELYPRVPLHCRVRIEEA 161


>gi|253701653|ref|YP_003022842.1| peptidoglycan-binding protein [Geobacter sp. M21]
 gi|251776503|gb|ACT19084.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. M21]
          Length = 536

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G     V+ L+  L   G  D    ++  F    ++AV  FQ R  L   G +   TL
Sbjct: 454 KAGEKEAGVRLLQGLLKQVGCYD--GAVNGEFTDKTQAAVAEFQRREQLTADGKLGGQTL 511


>gi|162454953|ref|YP_001617320.1| N-acetylmuramoyl-L-alanine amidase [Sorangium cellulosum 'So ce
           56']
 gi|161165535|emb|CAN96840.1| N-acetylmuramoyl-L-alanine amidase [Sorangium cellulosum 'So ce
           56']
          Length = 217

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 14/84 (16%)

Query: 94  WPELPIR----------PLHLGNSSV-SVQR-LRERLIISGDLDPSKGLSVAFDAYVESA 141
           WP+ P             L LG+     V   ++ RL   G               + +A
Sbjct: 129 WPDTPGNETARAGGVTWALKLGHLDPIEVPSGVQGRLKNLGYFSREVDGKD--GPELANA 186

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V  +Q   GL P+G++D +T   +
Sbjct: 187 VAWYQSASGLTPTGVLDDATRAKL 210


>gi|229526247|ref|ZP_04415651.1| VgrG protein [Vibrio cholerae bv. albensis VL426]
 gi|229336405|gb|EEO01423.1| VgrG protein [Vibrio cholerae bv. albensis VL426]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 782 YSIGAVDGIVGKGTLLALD 800


>gi|147671421|ref|YP_001214855.1| vgrG protein [Vibrio cholerae O395]
 gi|262167069|ref|ZP_06034785.1| VgrG protein [Vibrio cholerae RC27]
 gi|146313804|gb|ABQ18344.1| vgrG protein [Vibrio cholerae O395]
 gi|227014751|gb|ACP10960.1| vgrG protein [Vibrio cholerae O395]
 gi|262024524|gb|EEY43209.1| VgrG protein [Vibrio cholerae RC27]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 782 YSIGAVDGIVGKGTLLALD 800


>gi|254225886|ref|ZP_04919489.1| vgrG protein [Vibrio cholerae V51]
 gi|125621613|gb|EAZ49944.1| vgrG protein [Vibrio cholerae V51]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 782 YSIGAVDGIVGKGTLLALD 800


>gi|121727012|ref|ZP_01680208.1| vgrG protein [Vibrio cholerae V52]
 gi|121630646|gb|EAX63035.1| vgrG protein [Vibrio cholerae V52]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 782 YSIGAVDGIVGKGTLLALD 800


>gi|15600894|ref|NP_232524.1| vgrG protein [Vibrio cholerae O1 biovar eltor str. N16961]
 gi|121586876|ref|ZP_01676657.1| vgrG protein [Vibrio cholerae 2740-80]
 gi|153817727|ref|ZP_01970394.1| vgrG protein [Vibrio cholerae NCTC 8457]
 gi|153821639|ref|ZP_01974306.1| vgrG protein [Vibrio cholerae B33]
 gi|227811749|ref|YP_002811759.1| vgrG protein [Vibrio cholerae M66-2]
 gi|229506709|ref|ZP_04396218.1| VgrG protein [Vibrio cholerae BX 330286]
 gi|229510497|ref|ZP_04399977.1| VgrG protein [Vibrio cholerae B33]
 gi|229517372|ref|ZP_04406817.1| VgrG protein [Vibrio cholerae RC9]
 gi|229605182|ref|YP_002875886.1| VgrG protein [Vibrio cholerae MJ-1236]
 gi|254850390|ref|ZP_05239740.1| vgrG protein [Vibrio cholerae MO10]
 gi|255746058|ref|ZP_05420005.1| VgrG protein [Vibrio cholera CIRS 101]
 gi|262162104|ref|ZP_06031119.1| VgrG protein [Vibrio cholerae INDRE 91/1]
 gi|298499985|ref|ZP_07009791.1| vgrG protein [Vibrio cholerae MAK 757]
 gi|9657510|gb|AAF96037.1| vgrG protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121548919|gb|EAX58960.1| vgrG protein [Vibrio cholerae 2740-80]
 gi|126511769|gb|EAZ74363.1| vgrG protein [Vibrio cholerae NCTC 8457]
 gi|126520836|gb|EAZ78059.1| vgrG protein [Vibrio cholerae B33]
 gi|227010891|gb|ACP07102.1| vgrG protein [Vibrio cholerae M66-2]
 gi|229345408|gb|EEO10381.1| VgrG protein [Vibrio cholerae RC9]
 gi|229352942|gb|EEO17882.1| VgrG protein [Vibrio cholerae B33]
 gi|229357060|gb|EEO21978.1| VgrG protein [Vibrio cholerae BX 330286]
 gi|229371668|gb|ACQ62090.1| VgrG protein [Vibrio cholerae MJ-1236]
 gi|254846095|gb|EET24509.1| vgrG protein [Vibrio cholerae MO10]
 gi|255735812|gb|EET91210.1| VgrG protein [Vibrio cholera CIRS 101]
 gi|262028179|gb|EEY46837.1| VgrG protein [Vibrio cholerae INDRE 91/1]
 gi|297541966|gb|EFH78017.1| vgrG protein [Vibrio cholerae MAK 757]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V   TL A++
Sbjct: 782 YSIGAVDGIVGKGTLLALD 800


>gi|312109514|ref|YP_003987830.1| carboxyl-terminal protease [Geobacillus sp. Y4.1MC1]
 gi|311214615|gb|ADP73219.1| carboxyl-terminal protease [Geobacillus sp. Y4.1MC1]
          Length = 480

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    ++  V+  ++ L   G           F    E+AVK FQ  + L P+G +D 
Sbjct: 391 KALSFDMNNEQVKNAQQMLKGIGF--DPGRTDGYFSKETEAAVKAFQKANKLPPTGKIDK 448

Query: 160 STLEAMNVPVDLRIR 174
           +T + +   V   IR
Sbjct: 449 NTADVLQAKVMEAIR 463


>gi|330881024|gb|EGH15173.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 154

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
               +++N+    +     G+ V     + VGR    +PI  +++     NP W  P S
Sbjct: 96  PREGIVINLAEYRMYYYPKGQNVVHTYPLGVGREGWGSPIGVTKVTAKTPNPTWTPPAS 154


>gi|328880515|emb|CCA53754.1| hypothetical protein SVEN_0467 [Streptomyces venezuelae ATCC 10712]
          Length = 363

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 2/82 (2%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           +A+    D      +  +P+ R +  G+    V +L   L   G       +   +D   
Sbjct: 97  QALYELDDKPVTLLYGPVPVFREMKTGDRGSDVLQLERNLRDLGH-GAGLYVDTRYDKDT 155

Query: 139 ESAVKLFQMRHGLDPSGMVDSS 160
           E+AVK +Q     +P+G V   
Sbjct: 156 ETAVKRWQKSLNREPTGRVGKG 177


>gi|317472853|ref|ZP_07932161.1| autolytic lysozyme [Anaerostipes sp. 3_2_56FAA]
 gi|316899653|gb|EFV21659.1| autolytic lysozyme [Anaerostipes sp. 3_2_56FAA]
          Length = 315

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 17/110 (15%)

Query: 65  SDIPIISKE--TIAQTEKAIAF--YQDILSRGGWPELPIRP-----LHLGNSSVSVQRLR 115
           S     S +  ++ + +KAI    Y  + + G              +  G+    V  ++
Sbjct: 212 STATAFSAKKASVLKLQKAINKDKYAKLTANGVLDSKTKNAMKKIFIKRGSRGAVVSFVQ 271

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           E++ +S D            A   +A++ +Q +HGL   G+    TL  M
Sbjct: 272 EKVKVSQD--------GICGAKTVAAIRKYQRKHGLSVDGIAGYDTLRRM 313


>gi|114705430|ref|ZP_01438338.1| hypothetical protein FP2506_10836 [Fulvimarina pelagi HTCC2506]
 gi|114540215|gb|EAU43335.1| hypothetical protein FP2506_10836 [Fulvimarina pelagi HTCC2506]
          Length = 248

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 42/197 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++     R +           ++V+        V+ G   +R  V VGR   + 
Sbjct: 79  PAVDLSRVNPIYYRQEVADPTGEAPGTIVVDTANKFAYLVQPGGRAMRYGVGVGRAGME- 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               +++      P W  P  +IQ+                              E  ++
Sbjct: 138 WSGRAKVQWKKKWPTWTPPAEMIQRK----------------------------PELAEY 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
           ++          +PG  N + +  +      R+  Y +H +PE           +SGC+R
Sbjct: 170 SAENGGM-----EPGIGNPLGARALYLFQGGRDTLYRLHGSPEYWTIGTNN---SSGCIR 221

Query: 346 V--RNIIDLDVWLLKDT 360
              ++IIDL   +   T
Sbjct: 222 FMNQDIIDLYDRVPSGT 238


>gi|319408911|emb|CBI82568.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
           R1]
          Length = 219

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 8/65 (12%)

Query: 301 DPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            PG  N + +  +  F +  +T   +H + E           +SGC+R+  ++IIDL   
Sbjct: 153 PPGPDNPLGARALYLFKNGQDTLFRIHGSYEEWSIGQ---AISSGCIRLLNQDIIDLYDR 209

Query: 356 LLKDT 360
           +   +
Sbjct: 210 VPNGS 214


>gi|89098735|ref|ZP_01171616.1| carboxyl-terminal processing protease [Bacillus sp. NRRL B-14911]
 gi|89086411|gb|EAR65531.1| carboxyl-terminal processing protease [Bacillus sp. NRRL B-14911]
          Length = 475

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +PL L  ++  V+  +  L   G           F    E+AVK FQ   GL+ +G VDS
Sbjct: 386 KPLVLDMNNEQVKNAQIMLDGLGL--SPGRKDGYFSEATETAVKAFQQHQGLEATGKVDS 443

Query: 160 STLEAMNV 167
            T  A+  
Sbjct: 444 KTAAALEQ 451


>gi|269955655|ref|YP_003325444.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304336|gb|ACZ29886.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 360

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           L  G     V+++++ L  +G L         F     +AV+ +Q   G+   G+V
Sbjct: 123 LGAGTVGEDVRQIQQLLHDTGFLVAEPT--GRFGPATTAAVRAWQRSLGVTVDGVV 176


>gi|119773972|ref|YP_926712.1| peptidoglycan binding domain-containing protein [Shewanella
           amazonensis SB2B]
 gi|119766472|gb|ABL99042.1| peptidoglycan-binding domain 1 [Shewanella amazonensis SB2B]
          Length = 613

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 94  WPELPIRPLHLGNSSVS--VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W      P  +G +S    VQ L   L     + P       FD  +E+ +KLFQ +HGL
Sbjct: 525 WQAPVYSPREIGIASPQPEVQWLENGLAKVDKITPRLVNE--FDTELENRLKLFQRQHGL 582

Query: 152 DPSGMVDSSTLEAMNV---PVDLRIRQ 175
              G+  S TL+ +N+       R+ Q
Sbjct: 583 KADGIAGSQTLQQLNLYLSNEGPRLVQ 609


>gi|328542424|ref|YP_004302533.1| hypothetical protein SL003B_0804 [polymorphum gilvum SL003B-26A1]
 gi|326412171|gb|ADZ69234.1| Hypothetical conserved protein [Polymorphum gilvum SL003B-26A1]
          Length = 214

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 12/155 (7%)

Query: 203 ASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQD 262
             L   +         ++  +     P     ++      Y V   +   +  + + R+ 
Sbjct: 46  YRLTNFKRIDPVWHRQMV--KYFSPEPPGSVVVDTRNHFLYVVFENNTALRYGVGVGREG 103

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN--- 319
            Q+     I       + V     +    +P      +   + N +    +  Y      
Sbjct: 104 FQWFGRARIDRKALWPRWVPPP--EMLQRQPDLPRMVEGGAENNPLGPRALYLYRDGQDL 161

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
              +H T EP       R  +SGCVR+   ++IDL
Sbjct: 162 GYRLHGTLEPWSIG---RNVSSGCVRMFPEDVIDL 193


>gi|158317034|ref|YP_001509542.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec]
 gi|158112439|gb|ABW14636.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EAN1pec]
          Length = 132

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 19/75 (25%), Gaps = 16/75 (21%)

Query: 300 QDPGKINAMASTKIEFYS-----------RNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +                                 +H T  P L  +     + GCVR+RN
Sbjct: 56  RPGDPNGPWGPFAFGLSGFSDVITQFNGAEGIVGLHGTNRPDLVGSD---VSMGCVRLRN 112

Query: 349 II--DLDVWLLKDTP 361
                L   +   TP
Sbjct: 113 ADLLRLVDVVPLGTP 127


>gi|183179643|ref|ZP_02957854.1| vgrG protein [Vibrio cholerae MZO-3]
 gi|183013054|gb|EDT88354.1| vgrG protein [Vibrio cholerae MZO-3]
          Length = 1017

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 11/79 (13%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-------- 150
                 GN S  V+ L+E LI  G      G    F    ++A++ FQ  +         
Sbjct: 722 ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPS 781

Query: 151 ---LDPSGMVDSSTLEAMN 166
                  G+V + TL A++
Sbjct: 782 YSIGPVDGIVGNGTLLALD 800


>gi|168205823|ref|ZP_02631828.1| spore cortex-lytic enzyme SleC [Clostridium perfringens E str.
           JGS1987]
 gi|170662731|gb|EDT15414.1| spore cortex-lytic enzyme SleC [Clostridium perfringens E str.
           JGS1987]
          Length = 438

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      +VK FQ    L  +
Sbjct: 329 PGYTLTSGASGEPVRVIQEQLNAISKAYPLIPKVAVDGKYGPRTRESVKTFQKVFNLPQT 388

Query: 155 GMVDSSTLEAMN--VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G V+ +T   ++       +I +L+ ++ + K      +  RY  V  
Sbjct: 389 GEVNYATWYKISDVYVAVTKIAELRSSIEK-KIFYPPTIMDRYENVPK 435


>gi|119511038|ref|ZP_01630158.1| hypothetical protein N9414_09846 [Nodularia spumigena CCY9414]
 gi|119464289|gb|EAW45206.1| hypothetical protein N9414_09846 [Nodularia spumigena CCY9414]
          Length = 253

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R  L   G  D     +   D     A++ FQ  + L   G+    T +         ++
Sbjct: 33  RAVLRGLGY-DVKVTNTTLTDEETRKAIREFQRGYKLTVDGVAGPQTQDF----AATIVQ 87

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
            LQ NL  +    +  +       +   A   AV   +   +         R    L+  
Sbjct: 88  ILQANLNAV-LQPDNPLPRDQFYRSQTEA---AVREAQKKFQMEETGIADLRFRQRLNEE 143

Query: 235 INRIM 239
             +I+
Sbjct: 144 ARKII 148


>gi|296086490|emb|CBI32079.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL  
Sbjct: 64  GDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDEATLNQ 122

Query: 165 MNVP 168
           +  P
Sbjct: 123 IVSP 126


>gi|225424789|ref|XP_002267298.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 364

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL  
Sbjct: 55  GDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDEATLNQ 113

Query: 165 MNVP 168
           +  P
Sbjct: 114 IVSP 117


>gi|255024368|ref|ZP_05296354.1| periplasmic protease [Listeria monocytogenes FSL J1-208]
          Length = 259

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             +    G+    V+ +   L           +   +D   + AV+ FQ  + LD +G++
Sbjct: 176 STKVYQNGDFGDDVRTIETMLKALDY--NVGKVDGLYDIDTKYAVERFQAANKLDVTGIM 233

Query: 158 DSSTLEAMNVPVDLRIR 174
              T + +       ++
Sbjct: 234 TGVTTDKLVELTQKHLK 250


>gi|302876662|ref|YP_003845295.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307687337|ref|ZP_07629783.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302579519|gb|ADL53531.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 410

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMR 148
           G     P  PL + +   +V+ ++  L    +   L P   ++  +D     AV+ FQ  
Sbjct: 322 GITQPYPGSPLTIEDKGSNVRIIQGHLNKISEAYPLIPKVTVNGIYDLATAEAVRKFQNT 381

Query: 149 HGLDPSGMVDSSTLEAMNV 167
                +G+VD +T  +++ 
Sbjct: 382 FKASETGIVDFATWYSISR 400


>gi|326942971|gb|AEA18867.1| carboxyl-terminal protease [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 478

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|228903654|ref|ZP_04067774.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 4222]
 gi|228911008|ref|ZP_04074816.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 200]
 gi|228848663|gb|EEM93509.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 200]
 gi|228855922|gb|EEN00462.1| Carboxyl-terminal protease [Bacillus thuringiensis IBL 4222]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|228961408|ref|ZP_04123022.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798293|gb|EEM45292.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|228942316|ref|ZP_04104855.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228975245|ref|ZP_04135803.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981883|ref|ZP_04142178.1| Carboxyl-terminal protease [Bacillus thuringiensis Bt407]
 gi|228777995|gb|EEM26267.1| Carboxyl-terminal protease [Bacillus thuringiensis Bt407]
 gi|228784524|gb|EEM32545.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817360|gb|EEM63446.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229032797|ref|ZP_04188754.1| Carboxyl-terminal protease [Bacillus cereus AH1271]
 gi|228728526|gb|EEL79545.1| Carboxyl-terminal protease [Bacillus cereus AH1271]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229105784|ref|ZP_04236413.1| Carboxyl-terminal protease [Bacillus cereus Rock3-28]
 gi|228677673|gb|EEL31921.1| Carboxyl-terminal protease [Bacillus cereus Rock3-28]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229099607|ref|ZP_04230535.1| Carboxyl-terminal protease [Bacillus cereus Rock3-29]
 gi|229118673|ref|ZP_04248025.1| Carboxyl-terminal protease [Bacillus cereus Rock1-3]
 gi|228664865|gb|EEL20355.1| Carboxyl-terminal protease [Bacillus cereus Rock1-3]
 gi|228683903|gb|EEL37853.1| Carboxyl-terminal protease [Bacillus cereus Rock3-29]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229112588|ref|ZP_04242125.1| Carboxyl-terminal protease [Bacillus cereus Rock1-15]
 gi|229130426|ref|ZP_04259383.1| Carboxyl-terminal protease [Bacillus cereus BDRD-Cer4]
 gi|228653021|gb|EEL08902.1| Carboxyl-terminal protease [Bacillus cereus BDRD-Cer4]
 gi|228670968|gb|EEL26275.1| Carboxyl-terminal protease [Bacillus cereus Rock1-15]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229164119|ref|ZP_04292055.1| Carboxyl-terminal protease [Bacillus cereus R309803]
 gi|228619355|gb|EEK76245.1| Carboxyl-terminal protease [Bacillus cereus R309803]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229014342|ref|ZP_04171461.1| Carboxyl-terminal protease [Bacillus mycoides DSM 2048]
 gi|229063831|ref|ZP_04200135.1| Carboxyl-terminal protease [Bacillus cereus AH603]
 gi|229135987|ref|ZP_04264747.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST196]
 gi|229169888|ref|ZP_04297584.1| Carboxyl-terminal protease [Bacillus cereus AH621]
 gi|228613602|gb|EEK70731.1| Carboxyl-terminal protease [Bacillus cereus AH621]
 gi|228647445|gb|EEL03520.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST196]
 gi|228716468|gb|EEL68172.1| Carboxyl-terminal protease [Bacillus cereus AH603]
 gi|228746942|gb|EEL96826.1| Carboxyl-terminal protease [Bacillus mycoides DSM 2048]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|228923905|ref|ZP_04087182.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228955418|ref|ZP_04117423.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229050841|ref|ZP_04194393.1| Carboxyl-terminal protease [Bacillus cereus AH676]
 gi|229072627|ref|ZP_04205829.1| Carboxyl-terminal protease [Bacillus cereus F65185]
 gi|229082386|ref|ZP_04214849.1| Carboxyl-terminal protease [Bacillus cereus Rock4-2]
 gi|229147705|ref|ZP_04276048.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST24]
 gi|229153335|ref|ZP_04281513.1| Carboxyl-terminal protease [Bacillus cereus m1550]
 gi|229181435|ref|ZP_04308763.1| Carboxyl-terminal protease [Bacillus cereus 172560W]
 gi|228602010|gb|EEK59503.1| Carboxyl-terminal protease [Bacillus cereus 172560W]
 gi|228629939|gb|EEK86590.1| Carboxyl-terminal protease [Bacillus cereus m1550]
 gi|228635718|gb|EEK92205.1| Carboxyl-terminal protease [Bacillus cereus BDRD-ST24]
 gi|228700818|gb|EEL53341.1| Carboxyl-terminal protease [Bacillus cereus Rock4-2]
 gi|228710603|gb|EEL62576.1| Carboxyl-terminal protease [Bacillus cereus F65185]
 gi|228722497|gb|EEL73890.1| Carboxyl-terminal protease [Bacillus cereus AH676]
 gi|228804210|gb|EEM50824.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228835704|gb|EEM81068.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|229193421|ref|ZP_04320369.1| Carboxyl-terminal protease [Bacillus cereus ATCC 10876]
 gi|228590076|gb|EEK47947.1| Carboxyl-terminal protease [Bacillus cereus ATCC 10876]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|218900302|ref|YP_002448713.1| carboxyl-terminal protease [Bacillus cereus G9842]
 gi|218545542|gb|ACK97936.1| carboxyl-terminal protease [Bacillus cereus G9842]
          Length = 478

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|206970036|ref|ZP_03230989.1| carboxyl-terminal protease [Bacillus cereus AH1134]
 gi|218233322|ref|YP_002369956.1| carboxyl-terminal protease [Bacillus cereus B4264]
 gi|296505596|ref|YP_003667296.1| carboxyl-terminal protease [Bacillus thuringiensis BMB171]
 gi|206734613|gb|EDZ51782.1| carboxyl-terminal protease [Bacillus cereus AH1134]
 gi|218161279|gb|ACK61271.1| carboxyl-terminal protease [Bacillus cereus B4264]
 gi|296326648|gb|ADH09576.1| carboxyl-terminal protease [Bacillus thuringiensis BMB171]
          Length = 478

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|30023217|ref|NP_834848.1| carboxyl-terminal protease [Bacillus cereus ATCC 14579]
 gi|29898777|gb|AAP12049.1| Tail-specific protease [Bacillus cereus ATCC 14579]
          Length = 478

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|163942867|ref|YP_001647751.1| carboxyl-terminal protease [Bacillus weihenstephanensis KBAB4]
 gi|163865064|gb|ABY46123.1| carboxyl-terminal protease [Bacillus weihenstephanensis KBAB4]
          Length = 478

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 389 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 446

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 447 KTAEAIQTKIIEKIRS 462


>gi|89068213|ref|ZP_01155623.1| hypothetical protein OG2516_02089 [Oceanicola granulosus HTCC2516]
 gi|89046130|gb|EAR52188.1| hypothetical protein OG2516_02089 [Oceanicola granulosus HTCC2516]
          Length = 241

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 43/199 (21%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA-SLEAVENGKVGLRSTVIVGRVDRQ 227
             +    ++  L R +            +V  P A  L  +E     LR  V  G   R 
Sbjct: 63  PAVPEGVVREELWRQEVADPYGRYEVGSIVIDPDAGFLHLIEPDGRALRYGVGTGAAGRA 122

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
               ++ +      P W +P  +I++     L   P  +    +                
Sbjct: 123 -WNGNAVVQFKRHWPRWKVPAEMIERR--PDLA--PYSVAAGGM---------------- 161

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCV 344
                        DPG  N + +  +  +    +  Y +H   EP          +SGC+
Sbjct: 162 -------------DPGPGNPLGARALYLFEDGVDTLYRIHGACEPENLGK---AVSSGCI 205

Query: 345 RV--RNIIDLDVWLLKDTP 361
           R+  +++IDL   +    P
Sbjct: 206 RMLDQDVIDLHDRVRHHAP 224


>gi|75759022|ref|ZP_00739130.1| Tail-specific protease [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74493488|gb|EAO56596.1| Tail-specific protease [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 127

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 38  KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 95

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 96  KTAEAIQTKIIEKIRS 111


>gi|293400970|ref|ZP_06645115.1| penicillin-resistant DD-carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291305996|gb|EFE47240.1| penicillin-resistant DD-carboxypeptidase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 168

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIIS---GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            +  G+  + V +L+  L +      +         F    E+AV+ +Q   GL   G++
Sbjct: 6   VIKRGDLGIGVNKLQAYLNMMQQRNLISTVNKQDGVFGPLTETAVREWQRYAGLPIDGVI 65

Query: 158 DSSTLEAM 165
           + +T  ++
Sbjct: 66  NYNTWNSL 73



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           L  G   +SV +++E L     +        +   +     +AV+ +Q  + L+  G++ 
Sbjct: 95  LSSGQQGLSVFKMQEYLNEIAATNKCLRPIPVDGIYGPRTVAAVQQYQYLYDLNVDGVIG 154

Query: 159 SSTLEAM 165
           S T +++
Sbjct: 155 SMTWDSI 161


>gi|163737960|ref|ZP_02145376.1| Twin-arginine translocation pathway signal [Phaeobacter
           gallaeciensis BS107]
 gi|161388576|gb|EDQ12929.1| Twin-arginine translocation pathway signal [Phaeobacter
           gallaeciensis BS107]
          Length = 213

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 45/168 (26%)

Query: 183 IKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
                    +    VLV+I + +L    E+  V       V   D  T    ++I R + 
Sbjct: 70  KDWRPYFDSLRNGAVLVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTKIIRKVD 129

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++         +++P++                                   
Sbjct: 130 GPGWAPTPNMR--------KRNPEW-------------------------------PAYI 150

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 151 PPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RKSSNGCIGLYN 194


>gi|307330400|ref|ZP_07609544.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306883917|gb|EFN14959.1| Peptidoglycan-binding domain 1 protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 382

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 16/141 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV---- 157
           +  G+    V++L E L   G           F      AV+ +Q   GL  +G V    
Sbjct: 145 MKSGDKGEDVRQLEENLQALGY--SGFTPDSEFTDLTAQAVERWQKTLGLSQTGKVTDGR 202

Query: 158 -----DSSTLEAMNVPVDLRIRQ----LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
                 +  +     PV  +++     L     + +  ++  +G R ++     A++   
Sbjct: 203 VVFASGALRIATHKAPVGSKVQPGGPVLTGTSSKRQVHVDLDIGDRSLVKKDGTATVTL- 261

Query: 209 ENGKVGLRSTVIVGRVDRQTP 229
            +GK    +   VG   ++TP
Sbjct: 262 PDGKTVKGTITSVGTTVKKTP 282


>gi|240850144|ref|YP_002971537.1| ErfK/YbiS/YcfS/YnhG family protein [Bartonella grahamii as4aup]
 gi|240267267|gb|ACS50855.1| ErfK/YbiS/YcfS/YnhG family protein [Bartonella grahamii as4aup]
          Length = 247

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 53/220 (24%)

Query: 145 FQMRHGLDPS-----GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           FQ    + P      G V + T         + +  +     R + +         ++V+
Sbjct: 30  FQQVRYIPPEIQALYGPVTNETYLL----PAVDLATIDPKFWRQEVIYYTSYPPGTLVVD 85

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
                L  +      LR  + VG+           + R    P W    +++ ++     
Sbjct: 86  TQECFLYLIGENGKALRYGIGVGKEG-LAFEGEGVVQRKRRWPNWAPTAAMMAREP---- 140

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE-FYSR 318
                                              +      PG  N + +  +  F + 
Sbjct: 141 -------------------------------ERYGHLGKGMPPGPDNPLGARALYLFKNG 169

Query: 319 NNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            +T   +H + E        R  +SGC+R+  ++IIDL  
Sbjct: 170 KDTLFRIHGSHESWSIG---RAISSGCIRLLNQDIIDLYD 206


>gi|187736183|ref|YP_001878295.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426235|gb|ACD05514.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 156

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 43/180 (23%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDR-------QTPILHSRINRIMFNPYWVIPR 248
           + +N+P   L   ++GK+ L+  V  G+          +TP  H RI + + +     P 
Sbjct: 6   IRINLPRQELVLEKSGKILLQCPVSSGKAGTGHEEGSGKTPTGHFRICKKIGD---GEPE 62

Query: 249 SIIQKDMMALLR---QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
             I    +   R     P+ L +++  ++           + W                 
Sbjct: 63  DTIFISRLPAGRYPTAIPKSLNEHSDFILTR---------ILWLDGLE----------PH 103

Query: 306 NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           NA         SR   Y+H T +  L        + GC+R+    D+             
Sbjct: 104 NA------NTRSRY-IYIHGTNDTELLGTP---ASHGCIRLS-PRDMMALFALAEEGMDV 152


>gi|163742645|ref|ZP_02150031.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161384230|gb|EDQ08613.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 213

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 45/168 (26%)

Query: 183 IKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
                    +    VLV+I + +L    E+  V       V   D  T    ++I R + 
Sbjct: 70  KDWRPYFDSLRNGAVLVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTKIIRKVD 129

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++         +++P++                                   
Sbjct: 130 GPGWAPTPNMR--------KRNPEW-------------------------------PAYI 150

Query: 301 DPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 151 PPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RKSSNGCIGLYN 194


>gi|262368834|ref|ZP_06062163.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316512|gb|EEY97550.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 166

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            Y+H TP+       +   + GC+R+RN  +I+L   +
Sbjct: 119 IYIHGTPDSEPMGMPM---SHGCIRMRNTDVIELFELI 153


>gi|153843209|ref|ZP_01993550.1| LysM domain protein [Vibrio parahaemolyticus AQ3810]
 gi|149745333|gb|EDM56584.1| LysM domain protein [Vibrio parahaemolyticus AQ3810]
          Length = 158

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 192 GLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
             + +++N+    L     G+ V     V +GR+ R TP++ + I++   NP W  P S
Sbjct: 100 PHQGIVINLAELRLYYFPEGEDVVHVFPVGIGRIGRDTPVMTTSISQKRPNPTWTPPAS 158


>gi|260437975|ref|ZP_05791791.1| spore cortex-lytic enzyme SleC [Butyrivibrio crossotus DSM 2876]
 gi|292809601|gb|EFF68806.1| spore cortex-lytic enzyme SleC [Butyrivibrio crossotus DSM 2876]
          Length = 402

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+    V  ++E+L  I     + P   +   +     ++V  FQ    +  +
Sbjct: 321 PGYTLEIGSYGPPVTTIQEQLSLIRRTYSNIPPLTVDGIYGKDTAASVSKFQETFNMPVT 380

Query: 155 GMVDSSTLEAMNV 167
           G VD +T   ++ 
Sbjct: 381 GTVDYATWYKISQ 393


>gi|172051608|emb|CAQ35003.1| hypothetical protein [Photobacterium damselae subsp. piscicida]
          Length = 464

 Score = 46.9 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ++ L   G       +   +      AVK FQ   GL   G V  S LE + +    + R
Sbjct: 262 QQLLTDLGY--DPGPVDGDYGRRTADAVKAFQKAQGLTVDGWVSKSLLETLRLATSKKTR 319

Query: 175 QLQVNLMRIKKLLEQKMGL 193
           +          +  + +  
Sbjct: 320 KYDPPTNTQSTMPGKDISD 338


>gi|212633984|ref|YP_002310509.1| ATPase [Shewanella piezotolerans WP3]
 gi|212555468|gb|ACJ27922.1| ATPase [Shewanella piezotolerans WP3]
          Length = 531

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +   +G S+    +Q L   L I  +  P       FD+++E  VK FQ +HGL
Sbjct: 442 WQAPKSQVNEIGKSANQAQLQWLENSLAIINESSPRLVSE--FDSHLEQKVKEFQRQHGL 499

Query: 152 DPSGMVDSSTLEAMN 166
              G+  + TL  +N
Sbjct: 500 RADGIAGAQTLVQLN 514


>gi|47567393|ref|ZP_00238106.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47568463|ref|ZP_00239163.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47554854|gb|EAL13205.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47556014|gb|EAL14352.1| carboxyl-terminal protease [Bacillus cereus G9241]
          Length = 469

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G    +      F    ESA+K FQ  + ++ +G +D 
Sbjct: 380 KTLSYNSNDVQVKHAQEMLKSLGY--VTGREDGYFSKETESALKAFQNANKMEATGQLDK 437

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 438 KTAEAIQTKIIEKIRS 453


>gi|47569287|ref|ZP_00239972.1| carboxyl-terminal protease [Bacillus cereus G9241]
 gi|47554058|gb|EAL12424.1| carboxyl-terminal protease [Bacillus cereus G9241]
          Length = 494

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G    +      F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGY--VTGREDGYFSKETESALKAFQNANKMEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQTKIIEKIRS 478


>gi|330994400|ref|ZP_08318326.1| hypothetical protein SXCC_04291 [Gluconacetobacter sp. SXCC-1]
 gi|329758526|gb|EGG75044.1| hypothetical protein SXCC_04291 [Gluconacetobacter sp. SXCC-1]
          Length = 568

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 8/88 (9%)

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y+     GG      R     ++      L+ RL+  G L         +      A+
Sbjct: 361 ERYRQ--RLGGTALEEAR--RPLDTH---IALQRRLVELGYLPAGTVADGVYGEATREAI 413

Query: 143 KLFQM-RHGLDPSGMVDSSTLEAMNVPV 169
             +Q   H  +  G V  +  + +  P 
Sbjct: 414 ATWQRTTHRPETDGFVSDADAQVLLPPA 441


>gi|307943783|ref|ZP_07659127.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
 gi|307773413|gb|EFO32630.1| N-acetylmuramoyl-L-alanine amidase [Roseibium sp. TrichSKD4]
          Length = 258

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G++   V R RE L    D         L+  FD  +E     FQ   G+   
Sbjct: 149 PDGLLRRGDAGPDVHRWREDLDFYRDKIGHPYPVPLTGPFDHTLELVTMWFQKERGIQVD 208

Query: 155 GMVDSSTLEAMN 166
           G+V    LE M 
Sbjct: 209 GIVGPQVLEEMK 220


>gi|254562830|ref|YP_003069925.1| hypothetical protein METDI4470 [Methylobacterium extorquens DM4]
 gi|254270108|emb|CAX26098.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 243

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY- 322
              + I +I  K K              P+     +PG  N +    +      R+  Y 
Sbjct: 116 FTWSGIAVIKRKAKWPGWRPTAAMLKRRPDIPHYVEPGVNNPLGCRALYLYQGDRDTLYR 175

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           +H T EP          +SGC+R+   +I+DL
Sbjct: 176 IHGTNEPWTVGGTD---SSGCIRLLNEDILDL 204


>gi|238059219|ref|ZP_04603928.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora sp.
           ATCC 39149]
 gi|237881030|gb|EEP69858.1| N-acetylmuramoyl-L-alanine amidase family 2 [Micromonospora sp.
           ATCC 39149]
          Length = 420

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 35/103 (33%), Gaps = 9/103 (8%)

Query: 69  IISKETIAQTEKAIAF------YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
                T+A  +   A           L+   W  L    L    S   V  ++  L   G
Sbjct: 309 TFDAATVAAVQDWQARNGIPVDVDATLTTPTWETLAPE-LDQHASGAPVSAVQFILEWKG 367

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  ++  FD     AV+  Q  H L P G VD+ST  A+
Sbjct: 368 Y--ADVAVTGEFDHATRRAVQDVQRLHSLPPDGRVDTSTWCAI 408



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 5/59 (8%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGMVDSSTLE 163
           SS SV+ ++  L   G + P   ++  FDA   +AV+ +Q R+G+       + + T E
Sbjct: 286 SSPSVRVVQYLLTHRGYMVP---VNSTFDAATVAAVQDWQARNGIPVDVDATLTTPTWE 341


>gi|206599830|ref|YP_002241449.1| gp35 [Mycobacterium phage Troll4]
 gi|206283072|gb|ACI06497.1| gp35 [Mycobacterium phage Troll4]
          Length = 327

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L +G+    V +++  +                 F A  + AV  FQ R  +D  G 
Sbjct: 175 DGILRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGE 234

Query: 157 VDSSTLEAMN 166
           V   T   + 
Sbjct: 235 VGPQTKAKLA 244


>gi|109522603|ref|YP_655415.1| gp36 [Mycobacterium phage PLot]
 gi|109522811|ref|YP_655231.1| gp35 [Mycobacterium phage PBI1]
 gi|189043188|ref|YP_001936127.1| gp36 [Mycobacterium phage Adjutor]
 gi|206599654|ref|YP_002241533.1| gp35 [Mycobacterium phage Butterscotch]
 gi|88910524|gb|ABD58451.1| gp35 [Mycobacterium phage PBI1]
 gi|88910710|gb|ABD58635.1| gp36 [Mycobacterium phage PLot]
 gi|188090839|gb|ACD49621.1| gp36 [Mycobacterium phage Adjutor]
 gi|206282836|gb|ACI06323.1| gp35 [Mycobacterium phage Butterscotch]
          Length = 327

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L +G+    V +++  +                 F A  + AV  FQ R  +D  G 
Sbjct: 175 DGILRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGE 234

Query: 157 VDSSTLEAMN 166
           V   T   + 
Sbjct: 235 VGPQTKAKLA 244


>gi|261212669|ref|ZP_05926953.1| VgrG protein [Vibrio sp. RC341]
 gi|260837734|gb|EEX64411.1| VgrG protein [Vibrio sp. RC341]
          Length = 1050

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 11/78 (14%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG--------- 150
                GN S  V+ L+E LI  G      G    F    ++A++ FQ  +          
Sbjct: 723 SAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPSY 782

Query: 151 --LDPSGMVDSSTLEAMN 166
                 G+V   TL A++
Sbjct: 783 SIGPVDGIVGKGTLLALD 800


>gi|258622292|ref|ZP_05717318.1| VgrG protein [Vibrio mimicus VM573]
 gi|258585616|gb|EEW10339.1| VgrG protein [Vibrio mimicus VM573]
          Length = 1025

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 35/178 (19%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQ-----TEKAIAFYQDILSRGGWPELPIRPLHL 104
                 +        SD P   ++   +       K     + + +R             
Sbjct: 674 ASLPTMMPSSANYTASDEPAAEEKAPERILKSDLLKPSDELEKLANRQ------ASAYRQ 727

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-----------LDP 153
           GN+S  V+ L++ LI  G      G    F    ++A++ FQ  +               
Sbjct: 728 GNNSEEVRLLQQALIKLGFDLGKAGADGDFAGKTKTAIEQFQKSYQPSHQTHPSYSIGPV 787

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
            G+V   TL             L ++   +   + +   +    + +P   L     G
Sbjct: 788 DGIVGKGTL-------------LALDEALMDGWVHENDEMDMKWLTVPKGQLTFDAEG 832


>gi|206599740|ref|YP_002241929.1| gp34 [Mycobacterium phage Gumball]
 gi|206282954|gb|ACI06408.1| gp34 [Mycobacterium phage Gumball]
          Length = 327

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L +G+    V +++  +                 F A  + AV  FQ R  +D  G 
Sbjct: 175 DGILRIGSEGPEVLKMQRGMNSVFKNYRAMPLLEDGIFGAKTKEAVVEFQQRSLIDVDGE 234

Query: 157 VDSSTLEAMN 166
           V   T   + 
Sbjct: 235 VGPQTKAKLA 244


>gi|296447409|ref|ZP_06889335.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylosinus trichosporium OB3b]
 gi|296255112|gb|EFH02213.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylosinus trichosporium OB3b]
          Length = 249

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-P 153
           P +    L  G     V  L++ L   G   P   +S  +D    + V  FQ        
Sbjct: 170 PIVGGAALEPGAEGGEVSALQQALADYGYKSP---VSGCYDEGAAAVVAAFQRHFRPRLV 226

Query: 154 SGMVDSSTLE 163
            G  D STL+
Sbjct: 227 DGRADRSTLD 236


>gi|284033902|ref|YP_003383833.1| peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
 gi|283813195|gb|ADB35034.1| Peptidoglycan-binding domain 1 protein [Kribbella flavida DSM
           17836]
          Length = 206

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G+   +++ L+  L           +   + +   + V   Q RH L   G+    T 
Sbjct: 126 RFGDPDTAIRTLQRNLNYC--YGSKLTIDGVYGSNTRAIVMQVQKRHKLAADGIYGPQTR 183

Query: 163 EAMN 166
             MN
Sbjct: 184 STMN 187


>gi|226096828|dbj|BAH45270.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 474

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 11/86 (12%)

Query: 283 VEEVDWNSPEPPNF-----IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR 337
              +  N   P  +        Q  G  N   +  + F   N   +H T  P    +   
Sbjct: 355 PVAIGKNDSTPEGYYTIQQKINQPRGHDNIYGTRGMVFQ-ENGYALHGTNHPESIGSS-- 411

Query: 338 FETSGCVRVRNI--IDLDVWLLKDTP 361
             + GCVR+ N    +L  ++   T 
Sbjct: 412 -VSLGCVRLYNAAVEELYSFVSLGTE 436


>gi|194016849|ref|ZP_03055462.1| YvjB [Bacillus pumilus ATCC 7061]
 gi|194011455|gb|EDW21024.1| YvjB [Bacillus pumilus ATCC 7061]
          Length = 470

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P +   L ++   V+  ++              +  +D   ++ VK FQ  + L   G++
Sbjct: 379 PKKTYQLNDNGDEVKAAQKMFQALDY---KAKANGEYDQAFQTIVKSFQTDNDLKADGIL 435

Query: 158 DSSTLEAMNVPVDLRIR 174
              T   +   +  +++
Sbjct: 436 TGDTTTVLMTKIQNKLK 452


>gi|187736589|ref|YP_001878701.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426641|gb|ACD05920.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 215

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 59/208 (28%), Gaps = 52/208 (25%)

Query: 166 NVPVDLRIRQLQVNLMRIKK-LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           ++P + R+ Q           L     G +++++++    +       +   S +  G+ 
Sbjct: 56  DLPPEARLGQ-------GYWDLPAGTQGEKHIIIDLKQQKVFYYVGTTLVGVSPMSSGKE 108

Query: 225 DRQTPILHSRINRIMFNPY---WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              TP    +I +   N     + + RS     ++     +  Y            G   
Sbjct: 109 GYGTPRGTYKIIQKDANYKSGTYGVLRSKSTGAVV-----NGDYNARAG---GAPAGTYF 160

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
               +         +  R   G                   MH     + F       + 
Sbjct: 161 DPAPM--------PYWMRITGG-----------------YGMH-----VGFVTGY-PVSH 189

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
           GCVR+    D+     + TP  ++  I 
Sbjct: 190 GCVRL--PEDMAKTFFEHTPIGTKVTIR 215


>gi|260430658|ref|ZP_05784630.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260418099|gb|EEX11357.1| ErfK/YbiS/YcfS/YnhG family protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 221

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 6/49 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
             G  N + +        +R+    +H TP P       R  +SGCVR+
Sbjct: 145 PGGPTNPLGARAFYLYQGNRDTYLRIHGTPYPRSIG--GRA-SSGCVRM 190


>gi|329928740|ref|ZP_08282589.1| peptidase, S41 family [Paenibacillus sp. HGF5]
 gi|328937521|gb|EGG33939.1| peptidase, S41 family [Paenibacillus sp. HGF5]
          Length = 490

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S  V+  +  L   G    +      FD   E AVK FQ +H L   G+++
Sbjct: 400 STDVKNAQIMLEAVGY--AAGRTDGYFDRNTEKAVKSFQSKHKLKADGIIN 448


>gi|310641373|ref|YP_003946131.1| erfk/ybis/ycfs/ynhg family protein [Paenibacillus polymyxa SC2]
 gi|309246323|gb|ADO55890.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa SC2]
          Length = 476

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 297 IFRQDPGKINA-MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLD 353
                 GK N    S  ++  + N   +H T EP          + GCVR+   ++ +L 
Sbjct: 375 KVVNPNGKSNGEFGSRGMQLSATN-YAIHGTNEPESIGKNE---SLGCVRMGKEDVEELF 430

Query: 354 VWLLKDTP 361
             +   T 
Sbjct: 431 ALVPSGTE 438


>gi|310825721|ref|YP_003958078.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
           limosum KIST612]
 gi|308737455|gb|ADO35115.1| putative muramoyl-pentapeptide carboxypeptidase [Eubacterium
           limosum KIST612]
          Length = 173

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           +  ++  L   G                ++AVK FQ + G+   G+    T 
Sbjct: 3   ILEVQRILSHLGY--NPGEHDGLDGPNTQAAVKAFQRKAGIKADGIAGPVTR 52


>gi|261409610|ref|YP_003245851.1| carboxyl-terminal protease [Paenibacillus sp. Y412MC10]
 gi|261286073|gb|ACX68044.1| carboxyl-terminal protease [Paenibacillus sp. Y412MC10]
          Length = 490

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S  V+  +  L   G    +      FD   E AVK FQ +H L   G+++
Sbjct: 400 STDVKNAQIMLEAVGY--AAGRTDGYFDRNTEKAVKSFQSKHKLKADGIIN 448


>gi|222109277|ref|YP_002551541.1| peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
 gi|221728721|gb|ACM31541.1| Peptidoglycan-binding domain 1 protein [Acidovorax ebreus TPSY]
          Length = 346

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  +ERL   G    +   S         A++ FQ   GL  +G +DS+T  A++ 
Sbjct: 292 VREAQERLNAMGYNVGTPDGSA--GPKTARALREFQQAQGLPVTGRLDSATAGALSR 346


>gi|108801144|ref|YP_641341.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mycobacterium sp. MCS]
 gi|119870276|ref|YP_940228.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           KMS]
 gi|126436973|ref|YP_001072664.1| peptidoglycan binding domain-containing protein [Mycobacterium sp.
           JLS]
 gi|108771563|gb|ABG10285.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mycobacterium sp. MCS]
 gi|119696365|gb|ABL93438.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. KMS]
 gi|126236773|gb|ABO00174.1| Peptidoglycan-binding domain 1 protein [Mycobacterium sp. JLS]
          Length = 232

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 103 HLGNSSVSVQRLRERL-IISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
            +G +   V   + RL            +   +    E+AV+ FQ R  GL   G+V  
Sbjct: 163 RIGFADAHVAEAQRRLKYAYRRYAGHLEIDGVYGPETEAAVREFQRRTPGLLADGIVGP 221


>gi|308272916|emb|CBX29520.1| hypothetical protein N47_J05010 [uncultured Desulfobacterium sp.]
          Length = 164

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 47/184 (25%), Gaps = 58/184 (31%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG----------RVDR 226
             N    +KL        Y++++     L      K    + V  G          +   
Sbjct: 4   AKNSALKQKLGSFNPNGVYIVIDTGLNRLYLKRGSKTIQEAIVSCGSGNILKDPSGKRQW 63

Query: 227 --QTPILHSRINRIMFNPYWVIP--RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
              TP+    +     +P W  P    I + + +                          
Sbjct: 64  VFDTPMGEYHVKSKKISPVWTRPDWAFIEEGEAIPK-----------------------D 100

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSG 342
             +             R + G    +    + F +    ++H T    L     R  + G
Sbjct: 101 PSQ-------------RIEKG---VLGDYALGFGN--GYFIHGTLYTRLLG---RNVSHG 139

Query: 343 CVRV 346
           C+RV
Sbjct: 140 CIRV 143


>gi|29566134|ref|NP_817703.1| gp25 [Mycobacterium phage Che9c]
 gi|29424859|gb|AAN12586.1| gp25 [Mycobacterium phage Che9c]
          Length = 317

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)

Query: 103 HLGNSSVSVQRLRERLI--ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LG+++  V+ L++ L    SG       +   F    E  V  FQ R G+   G+V   
Sbjct: 182 QLGDNNDRVRSLQQFLNDNFSGY--SKLDVDGDFGPLTEKVVAEFQRRVGVAADGIVGPV 239

Query: 161 TLEAM 165
           TL  +
Sbjct: 240 TLAKL 244


>gi|227820506|ref|YP_002824477.1| Protein erfK/srfK precursor [Sinorhizobium fredii NGR234]
 gi|227339505|gb|ACP23724.1| Protein erfK/srfK precursor [Sinorhizobium fredii NGR234]
          Length = 212

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 52/184 (28%), Gaps = 44/184 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           M+ P           L R       +     ++++    +L  V+     LR +V VGR 
Sbjct: 54  MSAPAYPPRHAPGAFLPRQVVKYRTQEAPGTIIIDTRRYALYYVQPHGTALRYSVGVGRE 113

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
                     ++R    P W  P      DM A   + P Y+                  
Sbjct: 114 G-YGWHGTEMVSRKRAWPEWRPPA-----DMRARRPELPAYMA----------------- 150

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCV 344
                             G  N + +  I         +H + EP       R  +SGC 
Sbjct: 151 -----------------GGADNPLGARAIYLGDT-LYRIHGSNEPESVG---RSSSSGCF 189

Query: 345 RVRN 348
           R+ N
Sbjct: 190 RMTN 193


>gi|54297495|ref|YP_123864.1| hypothetical protein lpp1540 [Legionella pneumophila str. Paris]
 gi|53751280|emb|CAH12691.1| hypothetical protein lpp1540 [Legionella pneumophila str. Paris]
          Length = 162

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+           + GC+R+ N  +I+L  W  K+T
Sbjct: 119 IYIHGTPDTTQLGIPG---SHGCIRLNNDAVIELAAWATKNT 157


>gi|218708445|ref|YP_002416066.1| putative general secretion pathway protein A [Vibrio splendidus
           LGP32]
 gi|218321464|emb|CAV17416.1| putative general secretion pathway protein A [Vibrio splendidus
           LGP32]
          Length = 556

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           ++++           W +     L  G    +V  L    ++S  L      S  FD  +
Sbjct: 453 KQSLEQIWQGDYVAIWKQPLRETLKEGYQGEAVALLDL--LLSEVLGEVVSGSDVFDYEL 510

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           +  ++ FQ   G+   G+    TL  +      R+ QL
Sbjct: 511 KMKIEAFQTWQGMSVDGIAGKLTLARL-----QRLAQL 543


>gi|302532517|ref|ZP_07284859.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302441412|gb|EFL13228.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 220

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
                F A   SAVK +Q  HG+   G    +T+ AM V   +RI 
Sbjct: 79  AADGLFGAGTRSAVKRWQSTHGVGADGTAGPATMSAMGVSRTVRIA 124



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 1/43 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L   G L     +         +A++ FQ  +GLD  G   + 
Sbjct: 19  LAGLGYLAAD-RVDGVDGPATRAALRDFQGDNGLDADGKYGAR 60


>gi|90426380|ref|YP_534750.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
 gi|90108394|gb|ABD90431.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 226

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 8/57 (14%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           D G  N +    +      ++  Y +H T EP          +SGC+R+  ++I+DL
Sbjct: 160 DGGGANPLGPRALYLFKDGKDTLYRIHGTTEPETIGK---AVSSGCIRMLNQDIVDL 213


>gi|269956380|ref|YP_003326169.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305061|gb|ACZ30611.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 360

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           L  G     V+++++ L  +G L         F     +AV+ +Q   G+   G+V
Sbjct: 123 LGAGTVGEDVRQIQQLLHDTGFLVADPT--GRFGPATTAAVRAWQRSLGVTVDGVV 176


>gi|260904990|ref|ZP_05913312.1| N-acetymuramyl-L-alanine amidase [Brevibacterium linens BL2]
          Length = 354

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +   V RL+  L   G       +   + A  ++AVK  QM  G    G+    TL 
Sbjct: 68  TGDDVLRLQRTLAGLGFYA--GRMDAEYSAVTDAAVKELQMSLGTKVDGIAGPQTLR 122



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 1/50 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +   G L+     S  FD   E  V+ FQ   G+   G++   T   +  
Sbjct: 1   MARLG-LNVGDTDSDEFDRAFELGVRQFQQVRGILCDGVMGKETFTELER 49


>gi|169343303|ref|ZP_02864313.1| spore cortex-lytic enzyme SleC [Clostridium perfringens C str.
           JGS1495]
 gi|169298601|gb|EDS80682.1| spore cortex-lytic enzyme SleC [Clostridium perfringens C str.
           JGS1495]
          Length = 438

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L  G S   V+ ++E+L        L P   +   +      +VK FQ    L  +
Sbjct: 329 PGYTLTSGASGEPVRVIQEQLNAISKAYPLIPKVAVDGKYGPRTRESVKTFQKVFNLPQT 388

Query: 155 GMVDSSTL-EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G V+ +T  +  +V V +       + +  K      +  RY  V  
Sbjct: 389 GEVNYATWYKISDVYVAVTKIAELRSSVEKKIFYPPTIMDRYENVPK 435


>gi|29830746|ref|NP_825380.1| peptidoglycan-binding protein [Streptomyces avermitilis MA-4680]
 gi|29607859|dbj|BAC71915.1| putative peptidoglycan-binding protein, secreted [Streptomyces
           avermitilis MA-4680]
          Length = 134

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LGN    V  L+  L        +      F      A+K  Q + G    G+   +T
Sbjct: 58  LALGNRGDGVLALQRTLRRC--YGSTIVADGIFGPSTRDALKYAQHQAGTQDDGVYGPNT 115

Query: 162 LEAMNVPVD 170
             A+     
Sbjct: 116 RRAIKHRPS 124


>gi|84502885|ref|ZP_01000998.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           batsensis HTCC2597]
 gi|84388868|gb|EAQ01738.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           batsensis HTCC2597]
          Length = 188

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 299 RQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLD 353
           R   G  N + +  +  +  N      +H T EP       R  +SGC R+ N  +IDL 
Sbjct: 119 RMPGGPGNPLGARALYLFEGNRDTLIRIHGTVEPRSIG---RRASSGCFRMINDHVIDLY 175

Query: 354 VWLLKDTP 361
             +   TP
Sbjct: 176 NRVEIGTP 183


>gi|253578488|ref|ZP_04855760.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850806|gb|EES78764.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 521

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 58/236 (24%), Gaps = 78/236 (33%)

Query: 143 KLFQMRHG-------------LDPSGMVDSST--LEAMNVPVDLRIRQLQVNLMRIKKLL 187
           + FQ   G             +D +  V   T  +++        +  +  N        
Sbjct: 332 REFQTTSGRTVSVYGSAYGWQIDQTSEVAQLTQEIQSGTQTTREPVYSMTANAHGY---- 387

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV---DRQTPILHSRINRIMFNPYW 244
              +G  Y+ V++    +   +NG+    S ++ G +   DRQTP     I         
Sbjct: 388 -NDIGNTYIEVDLSEQHMYFYQNGEDIFESDIVSGDMRYSDRQTPAGIYTIYYKK----- 441

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                                                  + +         + + Q    
Sbjct: 442 -------------------------------------SPDVLRGKQLANGKYEYEQPV-- 462

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDLDVWL 356
                +  + F        HD      F     +   + GC+ +      +L   +
Sbjct: 463 -----TYWMPFNG--GIGFHDANWQPYFGGDRFMEGGSHGCINMPPEKAAELYNII 511


>gi|308068492|ref|YP_003870097.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
 gi|305857771|gb|ADM69559.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus polymyxa E681]
          Length = 474

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 297 IFRQDPGKINA-MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLD 353
                 GK N    S  ++  + N   +H T +P          + GCVR+   ++ +L 
Sbjct: 373 KVVNPNGKSNGEFGSRGMQLSATN-YAIHGTNKPDSIGKNE---SLGCVRMGKEDVEELF 428

Query: 354 VWLLKDTP 361
             +   T 
Sbjct: 429 ALVPSGTE 436


>gi|109897279|ref|YP_660534.1| peptidoglycan binding domain-containing protein [Pseudoalteromonas
           atlantica T6c]
 gi|109699560|gb|ABG39480.1| Peptidoglycan-binding domain 1 [Pseudoalteromonas atlantica T6c]
          Length = 199

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           ++RLI    L+        FD     A K FQ   GL  +G+ D +TL
Sbjct: 145 KQRLIKMDYLNALGSDD--FDQETLDAFKHFQRDRGLAQTGVPDQNTL 190


>gi|225427043|ref|XP_002267238.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 370

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L++     G L       +  FD+  E+AV ++Q + GL  SG +DS T+ 
Sbjct: 53  GSQVSGMSELKKYFQRFGYLPVPNTNFTDVFDSRFETAVIMYQTKLGLPVSGKLDSKTIT 112

Query: 164 AMNVP 168
           A+  P
Sbjct: 113 AIVSP 117


>gi|147773502|emb|CAN66781.1| hypothetical protein VITISV_013507 [Vitis vinifera]
          Length = 373

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +  L++     G L       +  FD+  E+AV ++Q + GL  SG +DS T+ 
Sbjct: 53  GSQVSGMSELKKYFQRFGYLPVPNTNFTDVFDSRFETAVIMYQTKLGLPVSGKLDSKTIT 112

Query: 164 AMNVP 168
           A+  P
Sbjct: 113 AIVSP 117


>gi|269796068|ref|YP_003315523.1| hypothetical protein Sked_27870 [Sanguibacter keddieii DSM 10542]
 gi|269098253|gb|ACZ22689.1| hypothetical protein Sked_27870 [Sanguibacter keddieii DSM 10542]
          Length = 515

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            ELP  R L +G S   V +L++ L   G ++P    S  +DA   +AV
Sbjct: 126 GELPAYRTLRVGVSGPDVLQLKQALAALG-INPGNVESDVYDAATVAAV 173


>gi|253564757|ref|ZP_04842213.1| peptidoglycan-binding domain 1 protein [Bacteroides sp. 3_2_5]
 gi|251946222|gb|EES86599.1| peptidoglycan-binding domain 1 protein [Bacteroides sp. 3_2_5]
          Length = 264

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + + LG        L   L  +G    S   S  F   ++ +V  FQ +  LD  G+V  
Sbjct: 2   KTIKLGYEGEEALLLCRELKRNGY---SVKESRTFTQEMKESVVDFQQKSQLDADGIVGY 58

Query: 160 STLEAM---NVPVDLRIR 174
            T E++     P   R+ 
Sbjct: 59  RTWESLFFTGRPTTERLT 76


>gi|83645387|ref|YP_433822.1| membrane-bound lytic murein transglycosylase B [Hahella chejuensis
           KCTC 2396]
 gi|83633430|gb|ABC29397.1| Membrane-bound lytic murein transglycosylase B [Hahella chejuensis
           KCTC 2396]
          Length = 404

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           PELP  PL       +V  L+++L   G    +             A++ FQ + G+   
Sbjct: 334 PELPRLPLT------AVADLQQKLTDKGF--DAGKSDGIMGPATRDAIRAFQEKQGMIAD 385

Query: 155 GMVDSSTLEAMNVPVD 170
           G  +   L+A+++ + 
Sbjct: 386 GYPNPEVLQALDIKIQ 401


>gi|75908094|ref|YP_322390.1| peptidoglycan binding domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701819|gb|ABA21495.1| Peptidoglycan-binding domain 1 [Anabaena variabilis ATCC 29413]
          Length = 261

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           VQ L+  L      +P       +    E+A+K FQ +H L+ +G+ + +  + ++    
Sbjct: 96  VQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQTKHKLEATGIANLALRQKLDEEAK 155

Query: 171 LRIRQLQVNLMRIKKLLEQKMG 192
             I Q                 
Sbjct: 156 KVISQPSTEPTAKPSPSPTSKP 177



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 7/90 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRI 173
           R  L   G  +     +   DA  + A+  FQ  + L    G+    T +         +
Sbjct: 42  RTVLRGLGY-NVKVTNTPLTDAETKKAISEFQKGYKLTPVDGIAGPKTQDF----AANIV 96

Query: 174 RQLQVNLMR-IKKLLEQKMGLRYVLVNIPA 202
           + LQ NL   +K          Y      A
Sbjct: 97  QILQANLNAVLKTNPPLPRDQFYGPKTEAA 126


>gi|182420023|ref|ZP_02951257.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237669468|ref|ZP_04529448.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182376060|gb|EDT73647.1| spore cortex-lytic enzyme pre-pro-form [Clostridium butyricum 5521]
 gi|237654912|gb|EEP52472.1| peptidoglycan-binding domain 1 protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 441

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+S   V+ ++E+L  I     L P       +   V  +VK+FQ    L  +
Sbjct: 330 PGYDLTVGSSGEPVRTIQEQLNRIAQNYPLIPKLAQDGQYTDKVAESVKVFQGVFSLPQT 389

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 390 GVVDYATWYKIS 401


>gi|254466468|ref|ZP_05079879.1| twin-arginine translocation pathway signal [Rhodobacterales
           bacterium Y4I]
 gi|206687376|gb|EDZ47858.1| twin-arginine translocation pathway signal [Rhodobacterales
           bacterium Y4I]
          Length = 205

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 25/83 (30%), Gaps = 4/83 (4%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L       +  K +              P +     PG  N + +  +    +    +H 
Sbjct: 108 LTRRGRTQVVRKVEGPSWSPTPNMRKRNPEWPAYVPPGPDNPLGTHALYLSWKY-YRIHG 166

Query: 326 TPEPILFNNVVRFETSGCVRVRN 348
           T +        R  ++GC+ + N
Sbjct: 167 THDTRKIG---RKSSNGCIGLYN 186


>gi|271964678|ref|YP_003338874.1| hypothetical protein Sros_3186 [Streptosporangium roseum DSM 43021]
 gi|270507853|gb|ACZ86131.1| hypothetical protein Sros_3186 [Streptosporangium roseum DSM 43021]
          Length = 256

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 95  PELPIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P  P R L          V+  + ++   G       +   +      A + FQ   GL 
Sbjct: 181 PSFPGRVLKYPPVMVGEDVRTWQRQMRRRG---WDLDVDGLYGEASRDACRAFQREKGLS 237

Query: 153 PSGMVDSSTLEA 164
            +G V+ +T +A
Sbjct: 238 ATGAVNRATWQA 249


>gi|302534571|ref|ZP_07286913.1| membrane protein [Streptomyces sp. C]
 gi|302443466|gb|EFL15282.1| membrane protein [Streptomyces sp. C]
          Length = 471

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 21/84 (25%), Gaps = 5/84 (5%)

Query: 87  DILSRGGWPELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA----FDAYVESA 141
            +    G P  P  R    G S  +V  L  RL   G                D     A
Sbjct: 386 ALPGSAGVPAYPGLRVFRPGQSHPAVLALGRRLAQKGFGKYYTSGPGLRWSEADRRNVEA 445

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
            +  Q   G    G     T   +
Sbjct: 446 FQRAQGWRGGSADGYPGPETWRRL 469


>gi|154684734|ref|YP_001419895.1| YbfG [Bacillus amyloliquefaciens FZB42]
 gi|154350585|gb|ABS72664.1| YbfG [Bacillus amyloliquefaciens FZB42]
          Length = 724

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-------- 164
           L+  L   G      G S  F    ESAVK FQ   GL    G+V +  ++A        
Sbjct: 83  LQGALWCKGF--NPGGFSGVFYENTESAVKEFQKAAGLTKQDGIVTALIMKALLDMSAFR 140

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +    D RIRQ+Q NL R        M    +       +L      +  + ++V  G  
Sbjct: 141 LVAGGDKRIRQIQQNLNRDYNDYIGLMPCDGLYARDTNKALIYALQKEESMSTSVANGFF 200

Query: 225 DRQTPILHSRIN 236
              T  L   + 
Sbjct: 201 GNGTTSLCPTLT 212



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 54/158 (34%), Gaps = 8/158 (5%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
           LI+   L +    + A   D+ I +   ++  D  D        G+       +K  I  
Sbjct: 128 LIMKALLDMSAFRLVAGG-DKRIRQIQQNLNRDYNDYIGLMPCDGL--YARDTNKALIYA 184

Query: 78  TEKAIAFYQDILSRGGWPELPIR---PLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVA 133
            +K        ++ G +          L  G+S    V  ++  L  +G+          
Sbjct: 185 LQKE-ESMSTSVANGFFGNGTTSLCPTLTPGDSRTGFVLIVQYALYCNGEAFDPGEFDGK 243

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +   V SAVK FQ    L  +G  D  T++A+      
Sbjct: 244 YGVGVVSAVKAFQKFMCLPQTGYADMPTIKALLSSSGD 281


>gi|90418212|ref|ZP_01226124.1| lytic murein transglycosylase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337884|gb|EAS51535.1| lytic murein transglycosylase [Aurantimonas manganoxydans SI85-9A1]
          Length = 395

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P + +     G    + +RL++RL   G    + G+         +AV+  QMR GL 
Sbjct: 325 GAPPVDMGNPQPGLDLEATKRLQQRLTDLGY--DTGGVDGIIGENTRAAVRKEQMRLGLP 382

Query: 153 PSGMVDSSTLEAM 165
             G   +  L A+
Sbjct: 383 ADGWPTADLLRAL 395


>gi|118593468|ref|ZP_01550848.1| hypothetical protein SIAM614_16952 [Stappia aggregata IAM 12614]
 gi|118433947|gb|EAV40605.1| hypothetical protein SIAM614_16952 [Stappia aggregata IAM 12614]
          Length = 259

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +    ++++++ L   G             A   +A++ F+   GL  +G      +E +
Sbjct: 192 DVDPKLKKIQQALSELGY--GPLKADGVMGANTTAAIRRFEFDRGLPMTGEPGPKVIERL 249

Query: 166 NV 167
            +
Sbjct: 250 EM 251


>gi|326491397|dbj|BAJ94176.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 11/74 (14%)

Query: 106 NSSVSVQ---RLRERLIISGDLDPSKGLS--------VAFDAYVESAVKLFQMRHGLDPS 154
                V     L+  L   G +    G           AFD ++E+AVK +Q R  L  +
Sbjct: 55  QRGTRVTGLGDLKRYLATFGYMPKPAGAGAEHGGGPMDAFDEHLEAAVKRYQSRLSLPVT 114

Query: 155 GMVDSSTLEAMNVP 168
           G +D  TL+ M  P
Sbjct: 115 GRLDVVTLDQMMSP 128


>gi|229818792|ref|YP_002880318.1| Peptidoglycan-binding domain 1 protein [Beutenbergia cavernae DSM
           12333]
 gi|229564705|gb|ACQ78556.1| Peptidoglycan-binding domain 1 protein [Beutenbergia cavernae DSM
           12333]
          Length = 282

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 82  IAFYQDILSRGGWPELP----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY 137
           +  Y+ I+  G  P++        L  G+    V+ L++ L       P+      F   
Sbjct: 186 LNGYR-IVGGGRPPKVVVAQGAAGLKNGDRGPRVKALQQALNRWRSDLPALVADGVFGDL 244

Query: 138 VESAVKLFQMRHGL-------DPSGMVDSSTLEAMN 166
            E  ++ +Q R+            G+    TL A++
Sbjct: 245 TERRLREWQTRNRGGAYPAAAQIDGVAGPLTLAALD 280


>gi|330822714|ref|YP_004386017.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
 gi|329308086|gb|AEB82501.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans K601]
          Length = 346

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  +ERL   G    +   S         A++ FQ + GL  +G +D++T  A++ 
Sbjct: 292 VREAQERLNALGYNVGTPDGSA--GPKTARALREFQQQQGLPVTGRLDAATAGALSR 346


>gi|319760794|ref|YP_004124731.1| peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
 gi|317115355|gb|ADU97843.1| Peptidoglycan-binding domain 1 protein [Alicycliphilus
           denitrificans BC]
          Length = 346

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  +ERL   G    +   S         A++ FQ + GL  +G +D++T  A++ 
Sbjct: 292 VREAQERLNALGYNVGTPDGSA--GPKTARALREFQQQQGLPVTGRLDAATAGALSR 346


>gi|226941432|ref|YP_002796506.1| ErfK/YbiS/YcfS/YnhG protein [Laribacter hongkongensis HLHK9]
 gi|226716359|gb|ACO75497.1| ErfK/YbiS/YcfS/YnhG protein [Laribacter hongkongensis HLHK9]
          Length = 162

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 10/71 (14%)

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV-RFETSGCVRVRNIIDLDVWLLKDT 360
           PG  N +         R   Y+H TP+       + R  + GCVR+RN  D+     +  
Sbjct: 100 PG-RNRLGPVDTM---RRYIYLHGTPD----AVDMTRPGSHGCVRMRN-RDIAELFDRVV 150

Query: 361 PTWSRYHIEEV 371
           P      +E  
Sbjct: 151 PGTPVEIVEHA 161


>gi|224136290|ref|XP_002322292.1| predicted protein [Populus trichocarpa]
 gi|222869288|gb|EEF06419.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G     + +L+      G +  S    +  FD Y+ESA++ +Q    L+ +G +D  T+ 
Sbjct: 64  GKKYDGLAKLKHYFQYFGYIPNSLSNFTDDFDDYLESALRTYQQNFNLNVTGELDDQTVN 123

Query: 164 AMNVP 168
            +  P
Sbjct: 124 HVVRP 128


>gi|75675836|ref|YP_318257.1| lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255]
 gi|74420706|gb|ABA04905.1| Lytic murein transglycosylase [Nitrobacter winogradskyi Nb-255]
          Length = 407

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             VQ ++ RL  +G    + G           AVK FQ R GL P G      L  +  
Sbjct: 349 AEVQEVQTRLTQAGF--DTGGTDGRVGNDTMKAVKDFQARVGLPPDGYAGLKVLAKLRQ 405


>gi|7480279|pir||T34747 muramoyl-pentapeptide carboxypeptidase - Streptomyces coelicolor
           (fragment)
          Length = 189

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              + A   +AVK FQ  +GL   G+   +T   +
Sbjct: 16  DGQYGARTAAAVKKFQADYGLGADGVAGPATFSKI 50


>gi|94265641|ref|ZP_01289383.1| Peptidoglycan-binding domain 1 [delta proteobacterium MLMS-1]
 gi|93453851|gb|EAT04214.1| Peptidoglycan-binding domain 1 [delta proteobacterium MLMS-1]
          Length = 358

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 6/96 (6%)

Query: 83  AFYQDILSRGGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
             Y ++ S      P     P         ++  ++ L   G       +   +    E 
Sbjct: 128 QHYNNLQSNPALIKPTPDSDPSKPSAKH--IREAQQILTEIGY--DPGPIDGLYGRKTEG 183

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           AVK FQ    L   G++D  TL  + + V+ +  +L
Sbjct: 184 AVKAFQGDAKLPQHGLIDQETLTFLRMVVEQKKIKL 219


>gi|323490202|ref|ZP_08095420.1| carboxy-terminal processing protease [Planococcus donghaensis
           MPA1U2]
 gi|323396131|gb|EGA88959.1| carboxy-terminal processing protease [Planococcus donghaensis
           MPA1U2]
          Length = 507

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS-S 160
           L  G  S  V+   + L   G       +   F+  +  AVK FQ    L+ +G++   S
Sbjct: 405 LKDGTISEQVKTAEQMLEALGY--DVGEVDGVFEEQMTEAVKAFQEEKELEATGVLTEDS 462

Query: 161 TLEAMNV 167
           T   M+ 
Sbjct: 463 TFAVMDA 469


>gi|291007888|ref|ZP_06565861.1| hypothetical protein SeryN2_25476 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 378

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 105 GN-SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +V+ L+  L   G   P+      +     +AV  FQ  +GL P+G+ D    +
Sbjct: 318 GDGQGDAVRALQTLLTSRGHYVPA---DAHYAGRTATAVSDFQAANGLQPTGVADHEVWK 374

Query: 164 AM 165
            +
Sbjct: 375 RL 376


>gi|88860965|ref|ZP_01135601.1| hypothetical protein PTD2_10463 [Pseudoalteromonas tunicata D2]
 gi|88817178|gb|EAR26997.1| hypothetical protein PTD2_10463 [Pseudoalteromonas tunicata D2]
          Length = 490

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + +L   G +   +  +  +     +A+K FQ   GL  +G VD +T +A+ 
Sbjct: 299 QAQLNCLGYI-NDQEAAGKYTPNTVAAIKRFQQESGLTVNGKVDEATNKALA 349


>gi|330799115|ref|XP_003287593.1| hypothetical protein DICPUDRAFT_47448 [Dictyostelium purpureum]
 gi|325082379|gb|EGC35862.1| hypothetical protein DICPUDRAFT_47448 [Dictyostelium purpureum]
          Length = 772

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 100 RPLHLG----NSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPS 154
             L  G    ++  +V  L   L   G LD         + +  E AVK FQ  + L  +
Sbjct: 319 ESLKEGLKGTSTGEAVSLLNYSLYSIGCLDEYNHSTREIYTSTTEYAVKKFQEENNLPST 378

Query: 155 GMVDSSTLE 163
           G+ D +T+ 
Sbjct: 379 GVADFNTIR 387


>gi|259417407|ref|ZP_05741326.1| twin-arginine translocation pathway signal [Silicibacter sp.
           TrichCH4B]
 gi|259346313|gb|EEW58127.1| twin-arginine translocation pathway signal [Silicibacter sp.
           TrichCH4B]
          Length = 205

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 50/172 (29%), Gaps = 45/172 (26%)

Query: 179 NLMRIKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRIN 236
           +            +    +LV+I + +L    E+  V       V   D  T    ++I 
Sbjct: 58  SFRAKSWRPYFDNLRRGAILVDIDSRALHFWSEDQSVYKLFPSSVPLSDDLTRRGRTKIV 117

Query: 237 RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNF 296
           R +  P W    ++         +++P++                               
Sbjct: 118 RKVEGPGWAPTPNMR--------KRNPEW------------------------------- 138

Query: 297 IFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                PG  N + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 139 PAYIPPGPDNPLGTHALYLSWKY-YRIHGTHDTRKIG---RKSSNGCIGLYN 186


>gi|284038486|ref|YP_003388416.1| peptidoglycan-binding protein [Spirosoma linguale DSM 74]
 gi|283817779|gb|ADB39617.1| Peptidoglycan-binding domain 1 protein [Spirosoma linguale DSM 74]
          Length = 155

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 105 GNSSVSVQRLRE--RLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           G+S   V+R++E   L          +  L   F    + AV+ FQ    L  +G+V   
Sbjct: 19  GSSGPDVRRIQEWLCLNALRYPTAALTTTLDGEFGPATKLAVQNFQAVLKLPKTGVVTPD 78

Query: 161 TLEAMNVPVD 170
               ++ P+ 
Sbjct: 79  LFAKLSAPLA 88


>gi|241203659|ref|YP_002974755.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857549|gb|ACS55216.1| ErfK/YbiS/YcfS/YnhG family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 268

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 46/220 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+++
Sbjct: 75  QFHQTYGLPVTNPVHMAMYGQQRDEDFTLPAIPVSRVQPQFLRQEVDYQTAERPGTVVID 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             A  L  VE     +R  V +GR D         I      P W         +M++  
Sbjct: 135 TKAHFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTP-----SVEMVSRQ 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
            +   +  +N                               +PG +N + +  +      
Sbjct: 189 PEVRPFGAENGGM----------------------------NPGLMNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           ++  Y +H TP+           +SGCVR+  +++IDL  
Sbjct: 221 QDTLYRIHGTPDWQSVGK---ATSSGCVRMLNQDVIDLYD 257


>gi|163790212|ref|ZP_02184645.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
 gi|159874487|gb|EDP68558.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
          Length = 337

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 4/63 (6%)

Query: 108 SVSVQRLRERLIISGDLDPSK----GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              V  +++ +              G+   +      AV+ FQ  +GL   G     T  
Sbjct: 270 GADVLVMQQAMASIYYYPEKGAEKNGVDGWYGPLTVDAVERFQSVYGLTVDGTFGPKTRA 329

Query: 164 AMN 166
            ++
Sbjct: 330 KLS 332


>gi|163795922|ref|ZP_02189885.1| LysM-repeat protein [alpha proteobacterium BAL199]
 gi|159178677|gb|EDP63215.1| LysM-repeat protein [alpha proteobacterium BAL199]
          Length = 151

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 30/104 (28%), Gaps = 10/104 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V+  ++RL   G       +          A++ FQ    L  +G +D  T  A+
Sbjct: 20  AQSNQVRDAQQRLEALGH--SPGQIDGLMGPQTRDALRAFQQDKSLPATGELDWETRLAL 77

Query: 166 NVP--------VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           +             + R   V  + I  L              P
Sbjct: 78  SASVRSIDDAKPAPKPRSAPVPQVAISSLNPPGHPDIRSSEPSP 121


>gi|92115924|ref|YP_575653.1| hypothetical protein Nham_0297 [Nitrobacter hamburgensis X14]
 gi|91798818|gb|ABE61193.1| hypothetical protein Nham_0297 [Nitrobacter hamburgensis X14]
          Length = 1123

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 11/114 (9%)

Query: 95  PELPIRP-LHLGNS-SVSVQRLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHG 150
           P +   P L LG      +  LR RL +        G       D YV SA++L+Q  HG
Sbjct: 80  PAVGEGPVLTLGAGFDSRIPGLRTRLSV----PSWVGQHDALVLDEYVSSALELYQWAHG 135

Query: 151 LDPSGMVDS---STLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
           L  +G +D+    TL+       +   Q  +  +  +   E ++         P
Sbjct: 136 LPETGTLDAVTVGTLDRNVRTTSVPNDQQALTNIEPQPAPESELAETQTETRTP 189


>gi|84503170|ref|ZP_01001255.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
 gi|159046320|ref|YP_001541992.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|159046595|ref|YP_001542265.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|84388411|gb|EAQ01360.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanicola batsensis HTCC2597]
 gi|157914079|gb|ABV95511.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
 gi|157914354|gb|ABV95784.1| ErfK/YbiS/YcfS/YnhG family protein [Dinoroseobacter shibae DFL 12]
          Length = 186

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 55/190 (28%), Gaps = 48/190 (25%)

Query: 164 AMNVPVDLRIRQLQVNLMRIK---KLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           A+  P  +R   ++ N+   +          +G   ++ +    +L+             
Sbjct: 21  ALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPT 80

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            V   D  T   ++ +     NP W    S+ +        ++P++              
Sbjct: 81  SVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRE--------RNPEW-------------- 118

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                              R + G   N + +  +    +    +H T +        R 
Sbjct: 119 -----------------PARIEGGDPDNPLGTRALYLSWQY-YRIHGTQDTRKIG---RR 157

Query: 339 ETSGCVRVRN 348
            ++GC+ + N
Sbjct: 158 SSNGCIGLFN 167


>gi|114762585|ref|ZP_01442029.1| ErfK/YbiS/YcfS/YnhG family protein [Pelagibaca bermudensis
           HTCC2601]
 gi|114544840|gb|EAU47845.1| ErfK/YbiS/YcfS/YnhG family protein [Roseovarius sp. HTCC2601]
          Length = 172

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 55/190 (28%), Gaps = 48/190 (25%)

Query: 164 AMNVPVDLRIRQLQVNLMRIK---KLLEQK-MGLRYVLVNIPAASLEAVENGKVGLRSTV 219
           A+  P  +R   ++ N+   +          +G   ++ +    +L+             
Sbjct: 7   ALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPT 66

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
            V   D  T   ++ +     NP W    S+ +        ++P++              
Sbjct: 67  SVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRE--------RNPEW-------------- 104

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRF 338
                              R + G   N + +  +    +    +H T +        R 
Sbjct: 105 -----------------PARIEGGDPDNPLGTRALYLSWQY-YRIHGTQDTRKIG---RR 143

Query: 339 ETSGCVRVRN 348
            ++GC+ + N
Sbjct: 144 SSNGCIGLFN 153


>gi|134100266|ref|YP_001105927.1| hypothetical protein SACE_3731 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912889|emb|CAM03002.1| hypothetical protein SACE_3731 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 368

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 105 GN-SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+    +V+ L+  L   G   P+      +     +AV  FQ  +GL P+G+ D    +
Sbjct: 308 GDGQGDAVRALQTLLTSRGHYVPA---DAHYAGRTATAVSDFQAANGLQPTGVADHEVWK 364

Query: 164 AM 165
            +
Sbjct: 365 RL 366


>gi|27375195|ref|NP_766724.1| hypothetical protein blr0084 [Bradyrhizobium japonicum USDA 110]
 gi|27348331|dbj|BAC45349.1| blr0084 [Bradyrhizobium japonicum USDA 110]
          Length = 462

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           + + +V  +++ L   G  +P            ++AV  FQ ++GL  +G++D +T+ A+
Sbjct: 206 DIASTVVLMQQALNKLG-ANPPLAEDGISGPKTKAAVSQFQQQNGLRDTGLLDGATVAAV 264

Query: 166 NV 167
             
Sbjct: 265 TR 266


>gi|261405729|ref|YP_003241970.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
 gi|261282192|gb|ACX64163.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
          Length = 102

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 21/73 (28%), Gaps = 12/73 (16%)

Query: 304 KINAMASTKIEFYSR------NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLL 357
             N +    +    +          +H             + ++GC+R+ N      WL 
Sbjct: 36  PRNPLGDRWLGINVKVNGRTSYAYAIHG-NNANSIGK---YVSAGCIRMHNKD--VRWLY 89

Query: 358 KDTPTWSRYHIEE 370
                 +   I++
Sbjct: 90  DKVKMNTPVLIQK 102


>gi|254392825|ref|ZP_05007996.1| peptidoglycan-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294817691|ref|ZP_06776333.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326446603|ref|ZP_08221337.1| hypothetical protein SclaA2_36292 [Streptomyces clavuligerus ATCC
           27064]
 gi|197706483|gb|EDY52295.1| peptidoglycan-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|294322506|gb|EFG04641.1| Putative peptidoglycan binding protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 419

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 11/136 (8%)

Query: 100 RPLHLG-NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L  G +    V+ L   L   G   P+  +   F      AV+ +Q   G   +G   
Sbjct: 152 RTLEPGVDDGPDVEMLERNLKALGH-GPALTVDDHFTEGTADAVRAWQDSLGRTETGTAA 210

Query: 159 SSTLEAMNVPVDLRIRQL--QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
               +A+  P  +R+ +    +       LL      R V V++P A  +    G     
Sbjct: 211 PG--DAVVEPGAVRVTETLGIIGADAADTLLTLSGTRRIVTVDMPVAQQQLARLGAT--- 265

Query: 217 STVIVGRVDRQTPILH 232
             V +G    +T    
Sbjct: 266 --VRIGLPGGRTTTGK 279


>gi|326508750|dbj|BAJ95897.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326534042|dbj|BAJ89371.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L +G+    V+ ++E L   G     +     +F    E AVK +Q   G    G++
Sbjct: 182 KRALRVGSEGEEVRAMQEALEKLGFYSGEEDTEFSSFSTGTERAVKTWQASIGTTEDGLM 241

Query: 158 DSSTLE 163
            S  LE
Sbjct: 242 TSELLE 247


>gi|326503598|dbj|BAJ86305.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 382

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 1/66 (1%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMV 157
            R L +G+    V+ ++E L   G     +     +F    E AVK +Q   G    G++
Sbjct: 182 KRALRVGSEGEEVRAMQEALEKLGFYSGEEDTEFSSFSTGTERAVKTWQASIGTTEDGLM 241

Query: 158 DSSTLE 163
            S  LE
Sbjct: 242 TSELLE 247


>gi|148359119|ref|YP_001250326.1| hypothetical protein LPC_1007 [Legionella pneumophila str. Corby]
 gi|296107167|ref|YP_003618867.1| hypothetical protein lpa_02299 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280892|gb|ABQ54980.1| conserved hypothetical protein [Legionella pneumophila str. Corby]
 gi|295649068|gb|ADG24915.1| Conserved hypothetical protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|307610282|emb|CBW99846.1| hypothetical protein LPW_16071 [Legionella pneumophila 130b]
          Length = 162

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+           + GC+R+ N  II+L  W  K+T
Sbjct: 119 IYIHGTPDTTQLGIPG---SHGCIRLNNDAIIELAAWATKNT 157


>gi|52841812|ref|YP_095611.1| hypothetical protein lpg1582 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628923|gb|AAU27664.1| hypothetical protein lpg1582 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 146

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+           + GC+R+ N  II+L  W  K+T
Sbjct: 103 IYIHGTPDTTQLGIPG---SHGCIRLNNDAIIELAAWATKNT 141


>gi|54294374|ref|YP_126789.1| hypothetical protein lpl1443 [Legionella pneumophila str. Lens]
 gi|53754206|emb|CAH15683.1| hypothetical protein lpl1443 [Legionella pneumophila str. Lens]
          Length = 162

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+           + GC+R+ N  II+L  W  K+T
Sbjct: 119 IYIHGTPDTTQLGIPG---SHGCIRLNNDAIIELAAWATKNT 157


>gi|121998052|ref|YP_001002839.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
 gi|121589457|gb|ABM62037.1| ErfK/YbiS/YcfS/YnhG family protein [Halorhodospira halophila SL1]
          Length = 180

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTPTW 363
            Y+H  P+           + GCVR+RN   IDL   +   TP W
Sbjct: 124 IYIHGCPDSEPVGVPC---SHGCVRMRNAAVIDLFDAVTGGTPVW 165


>gi|163792344|ref|ZP_02186321.1| hypothetical protein BAL199_15893 [alpha proteobacterium BAL199]
 gi|159182049|gb|EDP66558.1| hypothetical protein BAL199_15893 [alpha proteobacterium BAL199]
          Length = 552

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            S  V R++  L+  G       +         +AV+ +Q   G+   G++D++ L ++ 
Sbjct: 444 RSPLVGRIQSALLERGF--DPGPVDGVQGPQTVAAVQAYQRYRGVTADGVIDAALLRSLK 501

Query: 167 VPVDLRIR 174
                R R
Sbjct: 502 TAPSPRPR 509


>gi|146282103|ref|YP_001172256.1| hypothetical protein PST_1736 [Pseudomonas stutzeri A1501]
 gi|145570308|gb|ABP79414.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 174

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+    +      + GCVR+RN   L   L    P   +  I E 
Sbjct: 118 IYIHGTPDCEPMSVP---LSHGCVRMRNADLL--QLFPRVPPHCQVRITEA 163


>gi|147773983|emb|CAN76268.1| hypothetical protein VITISV_004096 [Vitis vinifera]
          Length = 364

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +  + +L+E     G +  S      FD   E A+K +Q+   L+ +G +D +TL  
Sbjct: 55  GDKADGLAKLKEYFHYFGYIHNSNYTDD-FDDAFEQALKTYQLNFNLNTTGQLDXATLNQ 113

Query: 165 MNVP 168
           +  P
Sbjct: 114 IVSP 117


>gi|15613529|ref|NP_241832.1| N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall
           hydrolase) [Bacillus halodurans C-125]
 gi|10173581|dbj|BAB04685.1| N-acetylmuramoyl-L-alanine amidase (sporulation mother cell wall
           hydrolase) [Bacillus halodurans C-125]
          Length = 338

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 5/88 (5%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL-----SVAF 134
           K+    + I   G    +    L        V  L+  ++   D+   + +        F
Sbjct: 246 KSFQRKERITVDGIPGPVTQSRLLHKLQYSRVLYLQNPMMKGEDVRQVQRVVNVNPDSLF 305

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               E   + +Q +HGL   G V   T 
Sbjct: 306 GPQTERGARHYQQKHGLTVDGKVGPQTW 333



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 1/95 (1%)

Query: 86  QDILSRGGWPELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           +   + G   ++      L      +V  L+ +L+  G+                +A+K 
Sbjct: 188 KQKAAVGASKQVTTSGYDLIQRYFSNVSVLQRQLMAVGEDLSRYRDDGVAGKETLTAIKS 247

Query: 145 FQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           FQ +  +   G+    T   +   +         N
Sbjct: 248 FQRKERITVDGIPGPVTQSRLLHKLQYSRVLYLQN 282


>gi|218462264|ref|ZP_03502355.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli Kim 5]
          Length = 244

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 2/77 (2%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L +RL + G       +          A+K FQ    L  +G  D +T+EA+        
Sbjct: 8   LIQRLRLHGAYA--GVVDDVHGRATIEALKRFQHAEALPETGQADETTIEALRCDPARVP 65

Query: 174 RQLQVNLMRIKKLLEQK 190
               V +    ++  + 
Sbjct: 66  SSAPVAVTPAPRMPPEP 82


>gi|239941793|ref|ZP_04693730.1| peptidoglycan binding domain-containing protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239988253|ref|ZP_04708917.1| peptidoglycan binding domain-containing protein [Streptomyces
           roseosporus NRRL 11379]
          Length = 430

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 14/138 (10%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFL-----ARVDMGIDSDIPIISKETIAQTE 79
           S++  P+   VL + +        + R D              + +  P+ + + + +  
Sbjct: 63  SVLTAPVQRKVLSDTVITRGKVAASQRLDVSGEGVGEKSSGRSVVTKAPVRTGQPL-RMG 121

Query: 80  KAIAFYQDILSRGGW---PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           + +    +I  R  +    E+P  R L  G++   V +L++ L   G    +      F 
Sbjct: 122 QLLL---EISGRPVFVLRGEVPAYRDLGPGSTGQDVSQLQQALAGLGYGSGNDRA-GTFG 177

Query: 136 AYVESAVKLFQMRHGLDP 153
              E+AV  F   HG  P
Sbjct: 178 PGTEAAVTRFYRAHGHAP 195


>gi|228993887|ref|ZP_04153790.1| Carboxyl-terminal protease [Bacillus pseudomycoides DSM 12442]
 gi|228765838|gb|EEM14489.1| Carboxyl-terminal protease [Bacillus pseudomycoides DSM 12442]
          Length = 494

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEMTGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQNKIIEKIRS 478


>gi|228999923|ref|ZP_04159495.1| Carboxyl-terminal protease [Bacillus mycoides Rock3-17]
 gi|229007476|ref|ZP_04165073.1| Carboxyl-terminal protease [Bacillus mycoides Rock1-4]
 gi|228753864|gb|EEM03305.1| Carboxyl-terminal protease [Bacillus mycoides Rock1-4]
 gi|228759865|gb|EEM08839.1| Carboxyl-terminal protease [Bacillus mycoides Rock3-17]
          Length = 494

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEMTGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQNKIIEKIRS 478


>gi|319899254|ref|YP_004159347.1| peptidoglycan-binding protein [Bartonella clarridgeiae 73]
 gi|319403218|emb|CBI76777.1| peptidoglycan-binding protein [Bartonella clarridgeiae 73]
          Length = 420

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+ RL   GD      +        + A+K FQ+RHGL+ +G     TL  +  
Sbjct: 364 IELQSRLAKLGDY--EGEIDGKIGTASKKAIKAFQLRHGLETNGYPSYETLSHIRK 417


>gi|224138608|ref|XP_002326645.1| predicted protein [Populus trichocarpa]
 gi|222833967|gb|EEE72444.1| predicted protein [Populus trichocarpa]
          Length = 365

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+    +  L+E     G L      +    FD   ESAV  +Q   GL  +G +DS T+
Sbjct: 61  GSQVSGMSELKEYFNRFGYLPIPDENNFTDIFDKQFESAVIAYQTNLGLPVTGKLDSDTI 120

Query: 163 EAMNVP 168
             M  P
Sbjct: 121 SMMVSP 126


>gi|171913275|ref|ZP_02928745.1| hypothetical protein VspiD_18885 [Verrucomicrobium spinosum DSM
           4136]
          Length = 187

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 49/190 (25%), Gaps = 36/190 (18%)

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
            P    + Q     +  +   +   G   V + +        +  +    + +  G+  R
Sbjct: 16  KPTPPPVGQTPAKPVLYEWNGDSIEGPVSVKIVLDEQKAYIYKGTEQVGWTYLASGKGSR 75

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            +P  + RI   + +                       Y       + D +G  V  +  
Sbjct: 76  ASPAGNYRITEKIQDK----------------------YSNTWG-VLEDAEGNVVDGDAR 112

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV 346
               P PP   F   P          +         MH            R  + GC+R+
Sbjct: 113 SGREPIPPGGRFAGAPMP------YWMRLT-GYGMGMHA----GHIPQPGRPASHGCIRL 161

Query: 347 RNIIDLDVWL 356
               ++   L
Sbjct: 162 --PREMAEIL 169


>gi|116071002|ref|ZP_01468271.1| hypothetical protein BL107_15190 [Synechococcus sp. BL107]
 gi|116066407|gb|EAU72164.1| hypothetical protein BL107_15190 [Synechococcus sp. BL107]
          Length = 128

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 52/155 (33%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           + V++    L   ENGKV  +  + +G  +  T      I R   +P             
Sbjct: 3   IEVSLKNRYLTLFENGKVIGKYPIAIGAPESPTIPGQFDIQRKDASP------------- 49

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                            +  +KGK +                    PG  N +    + +
Sbjct: 50  -----------------IYHKKGKVI-------------------APGPDNPVGVRYMPY 73

Query: 316 Y--SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               R+   +H T  P   N      + GC+R+ N
Sbjct: 74  VRIGRDEYAIHGTAWPSWVNLRA-AVSLGCIRMLN 107


>gi|83593041|ref|YP_426793.1| lytic murein transglycosylase [Rhodospirillum rubrum ATCC 11170]
 gi|83575955|gb|ABC22506.1| Lytic murein transglycosylase [Rhodospirillum rubrum ATCC 11170]
          Length = 454

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 26/170 (15%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPI-------- 69
           ++LP GL L    +                 + R     AR  +     +P         
Sbjct: 287 VVLPAGLDLARVGLEERRPLADWAALGLRGADGRALGAGARAGVTAALLLPAGYRGPAFL 346

Query: 70  ISKETIAQTEKAIAFYQDIL-------SRGGWPEL---PIR--PLHLGNSSVSVQRLRER 117
           ++    +  +   +    +        + GG P +   P    PL     S  V  ++ R
Sbjct: 347 VTDNYFSILKWNRSMLYALAVGLLADRAAGGGPLVHPPPADEAPLR----SADVAEIQSR 402

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L   G    +        A    A++ +Q   G    G  + + L  +  
Sbjct: 403 LSALGY--DAGTADGVIGAQTRVAIRAYQASIGAPADGYANDALLADLRR 450


>gi|312200872|ref|YP_004020933.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c]
 gi|311232208|gb|ADP85063.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c]
          Length = 254

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 5/45 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
             +H T EP L  +     + GC+R+ N  I  L   +   TP  
Sbjct: 210 IGLHGTNEPQLLGHD---VSHGCIRLSNDAITRLAGTVPTGTPVD 251


>gi|332307806|ref|YP_004435657.1| Peptidoglycan-binding domain 1 protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175135|gb|AEE24389.1| Peptidoglycan-binding domain 1 protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 199

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           ++RL     L         FD     A K FQ  +GL  +G+ D +TL
Sbjct: 145 KQRLRKMDYLKDMGSSD--FDQATLDAFKHFQRDNGLAQTGVPDQNTL 190


>gi|255525438|ref|ZP_05392376.1| Peptidoglycan-binding domain 1 protein [Clostridium carboxidivorans
           P7]
 gi|296187864|ref|ZP_06856258.1| hypothetical protein CLCAR_3370 [Clostridium carboxidivorans P7]
 gi|255510905|gb|EET87207.1| Peptidoglycan-binding domain 1 protein [Clostridium carboxidivorans
           P7]
 gi|296047821|gb|EFG87261.1| hypothetical protein CLCAR_3370 [Clostridium carboxidivorans P7]
          Length = 302

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
               + L N S  V+ ++  L +             +  + E AVK  Q + G++  G+ 
Sbjct: 46  STVTIKLNNKSDIVKHIQVTLNL--YFGSGLAEDGVYGNFTEDAVKSVQKKLGINVDGIF 103

Query: 158 DSSTLEAM 165
              T +A+
Sbjct: 104 GPKTAKAL 111



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 16/99 (16%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK 128
           I   +T     K +     I  + G+  +                ++++LI  G    + 
Sbjct: 102 IFGPKTAKALLKYVNN-TSIDDKNGFTPVS-------------VNIQKQLIDLGYKINAN 147

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           G   ++D  +  A++ FQ  + L  +G VD + L  +N 
Sbjct: 148 GNLSSYDTML--AIRQFQKTNNLSVTGKVDINLLNKLNK 184


>gi|148245158|ref|YP_001219851.1| glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219684036|ref|YP_002470418.1| hypothetical protein CKR_P08 [Clostridium kluyveri NBRC 12016]
 gi|146337038|gb|ABQ23649.1| predicted glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219570544|dbj|BAH08527.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 306

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+ S  V  ++++L     L  +    + +D     AV   Q        G++   T  
Sbjct: 243 GHKSHVVLWIQQKLEQYEYLKENSYTQMLYDEPTFQAVTELQKNWERPTDGVLRPETWN 301


>gi|15894595|ref|NP_347944.1| peptodoglycan-binding domain-containing protein [Clostridium
           acetobutylicum ATCC 824]
 gi|15024244|gb|AAK79284.1|AE007643_7 Peptodoglycan-binding domain containing protein [Clostridium
           acetobutylicum ATCC 824]
 gi|325508730|gb|ADZ20366.1| Peptodoglycan-binding domain containing protein [Clostridium
           acetobutylicum EA 2018]
          Length = 148

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 32/131 (24%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIA---FY---QDILSRGGWPELPIRPLHLGN 106
           ++ + +V   + +++     +  A T         Y   Q ++  GG        +  G+
Sbjct: 33  NHPIPKVSAPVATNLNATKSKMFASTRTYGTSFGRYMTAQQVIDNGG-------IIQEGD 85

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM-------RHG----LDPSG 155
           +   V  ++ RL I             F +   SAV  FQ        R+G    L   G
Sbjct: 86  TGEPVADIQRRLGI--------YDDGIFGSATYSAVVDFQRRIDREFHRNGYSDPLALDG 137

Query: 156 MVDSSTLEAMN 166
           +V + T   + 
Sbjct: 138 IVGAQTWYYLK 148


>gi|308272732|emb|CBX29336.1| hypothetical protein N47_J03170 [uncultured Desulfobacterium sp.]
          Length = 234

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            + R ++ L  +G    S      +D     AVK FQ   G+   G+  S TL
Sbjct: 164 RIMRFQKLLKEAGTYHKSLT--GTYDKDTLLAVKQFQSSKGIKQDGIAGSQTL 214


>gi|291545277|emb|CBL18386.1| Putative peptidoglycan-binding domain-containing protein
           [Ruminococcus sp. 18P13]
          Length = 165

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 6/112 (5%)

Query: 65  SDIPIISKETIAQTEKAIAFYQDILSRGGWPEL---PIRPLHLGNSSVSVQRLRERLIIS 121
            ++P   +   A  +  +  Y+   +      +       L  G+S   V  ++  L   
Sbjct: 53  YNLPATGEVNRATWDAIVRAYRKQTAEPDALNVFPSAGYVLREGDSGTLVYIVQAMLNDI 112

Query: 122 G---DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           G   D      ++ +F+A   +A++  Q    L  +G VD  T   M   V 
Sbjct: 113 GSRYDNLAPVAINGSFNAATTNAIRGVQQAADLPQTGAVDRDTWNWMVTAVQ 164



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           P+      +     SAV+ FQ  + L  +G V+ +T +A+  
Sbjct: 30  PTVTPDGIYGPRTVSAVQAFQKIYNLPATGEVNRATWDAIVR 71


>gi|209965073|ref|YP_002297988.1| localization factor PodJL [Rhodospirillum centenum SW]
 gi|209958539|gb|ACI99175.1| localization factor PodJL [Rhodospirillum centenum SW]
          Length = 335

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 7/111 (6%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             ++Q  ++ L   G            DA   +AVK +Q   GL  +G +D +T++ +  
Sbjct: 65  GATIQWAQQILDEKGFYQGRA--HGRLDAATTAAVKAYQKSVGLKVTGTLDKATVDRLLA 122

Query: 168 PVDLRIRQLQVNLM----RIKKLLEQKMGLRYVLVNIPAAS-LEAVENGKV 213
                 +    NL     R +                P+A  + AVE G+ 
Sbjct: 123 DRSTAEKPTVGNLADPNSRARSSSPMVKERDVRPTAAPSAPGVSAVEGGET 173


>gi|289522182|ref|ZP_06439036.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289504018|gb|EFD25182.1| ErfK/YbiS/YcfS/YnhG family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 225

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 40/141 (28%), Gaps = 20/141 (14%)

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIP--RSIIQKDMMALLRQDPQYLKDNNIHMID 275
            +      ++  +L       +    W++   R+  QK  +  +R         +I    
Sbjct: 87  KITWVCSKKEHVLLALSETDKVIYGGWMVATGRNPGQKLKVGDMRTPEGVFYVKSIEDSS 146

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
             G  V     +        +  R + G                   +H T +  L    
Sbjct: 147 FWGSYVDKATKE--RIGYGPYFIRLETGWK--------------GIGIHGTDDEHLHEIG 190

Query: 336 VRFETSGCVRVRNIIDLDVWL 356
               + GC+R+ N  DL   +
Sbjct: 191 T-DASHGCIRMAN-DDLLEVV 209


>gi|257454013|ref|ZP_05619287.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
 gi|257448491|gb|EEV23460.1| ErfK/YbiS/YcfS/YnhG [Enhydrobacter aerosaccus SK60]
          Length = 165

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H TP            + GC+R+RN
Sbjct: 121 IYIHGTPNTEPMGIP---LSHGCIRMRN 145


>gi|239943286|ref|ZP_04695223.1| hypothetical protein SrosN15_19988 [Streptomyces roseosporus NRRL
           15998]
 gi|239989744|ref|ZP_04710408.1| hypothetical protein SrosN1_20750 [Streptomyces roseosporus NRRL
           11379]
          Length = 358

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  R +  G+    V +L   L   G       +   +    E+AVK +Q     + 
Sbjct: 108 GPVPAFREMKTGHRGSDVLQLERNLRDLGY-GAGLHVDTEYGEDTEAAVKRWQKHLNRET 166

Query: 154 SGMVDSS 160
           +G V   
Sbjct: 167 TGRVGRG 173


>gi|149911042|ref|ZP_01899670.1| general secretion pathway protein a [Moritella sp. PE36]
 gi|149805868|gb|EDM65856.1| general secretion pathway protein a [Moritella sp. PE36]
          Length = 546

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 101 PLHLGNSSVSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L   +    ++ L R    + G           FD  +   V  FQ + GL   G+V  
Sbjct: 463 SLKQNDKGELIRWLDRNISAVLG---EKAASGAKFDWPLMKKVMRFQQQSGLSADGIVGP 519

Query: 160 STL 162
            T+
Sbjct: 520 QTM 522


>gi|86740676|ref|YP_481076.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3]
 gi|86567538|gb|ABD11347.1| ErfK/YbiS/YcfS/YnhG [Frankia sp. CcI3]
          Length = 277

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 23/81 (28%), Gaps = 13/81 (16%)

Query: 296 FIFRQDPGKINAMASTKIEFYSRNN--------TYMHDTPEPILFNNVVRFETSGCVRVR 347
              R   G     A     F +             +H T +P       R  + GC+R+ 
Sbjct: 200 LRPRNPTGPYGPFAFGLSGFSTSLASFEGHAPIIGLHGTDQPHTLG---RDVSHGCIRLS 256

Query: 348 NIIDLDVWLLKDTPTWSRYHI 368
           N      WL    P  +   I
Sbjct: 257 NSD--ITWLAGMLPLGTPVDI 275


>gi|224122140|ref|XP_002318762.1| predicted protein [Populus trichocarpa]
 gi|222859435|gb|EEE96982.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G     + +L+      G +  S    +  FD  +ESA++ +Q    L+ +G +D  T+ 
Sbjct: 55  GEKYDGLAKLKSYFQYFGYIPNSLSNFTDDFDDSLESALRTYQQNFNLNITGQLDDQTVN 114

Query: 164 AMNVP 168
            +  P
Sbjct: 115 HIVRP 119


>gi|71278853|ref|YP_269370.1| CHAP domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71144593|gb|AAZ25066.1| CHAP domain protein [Colwellia psychrerythraea 34H]
          Length = 265

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH----G--LDPS 154
            L        V +L++ L  +G  +  K     FD        LFQ++H    G  L P 
Sbjct: 4   TLKRLIPDPEVIKLQQLLSSNGYFEEIKPSHGLFDGITFDNAVLFQLQHIYKDGDPLKPD 63

Query: 155 GMVDSSTLEAMNVPVDLRIR 174
           G++ + T  A+  P   + R
Sbjct: 64  GVIGAKTWWALKNPSGEKQR 83


>gi|254465139|ref|ZP_05078550.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
 gi|206686047|gb|EDZ46529.1| Putative peptidoglycan binding domain protein [Rhodobacterales
           bacterium Y4I]
          Length = 3030

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 106 NSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           ++   V  L+E L + G  +D  +    AF    ++A++  Q R GL PSG VD++T  A
Sbjct: 13  DTGEHVAALQEALGVEGFTVDAEELQHAAFGRSTQTALRELQERVGLTPSGNVDAATARA 72

Query: 165 MNVPVDLR--IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
           ++  +D R  +++ +  L  ++ L E             A +
Sbjct: 73  ISERLDRRGLLQESRAVLRDLRSLREGIALEDMPSEARAAFT 114


>gi|119490227|ref|ZP_01622740.1| probable phage-related lysozyme [Lyngbya sp. PCC 8106]
 gi|119454113|gb|EAW35266.1| probable phage-related lysozyme [Lyngbya sp. PCC 8106]
          Length = 284

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
           ++    +L    +  S L + +N       +  F  +       +           +  T
Sbjct: 147 LVSFCFNLGAGSLFKSTLLKFLNVRKLQEASLEFPRWNKAGGQPL-----------LGLT 195

Query: 79  EKAIAFYQDILSRGGW-PELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSKGLSVAF 134
            + +A  + +     W P L    L L      S  V+ +++ L  +G        +  F
Sbjct: 196 RRRMAE-RALFLGKPWQPFLEYELLQLTQPKIKSEYVRYVQQGLQKAGF---DIQKNGVF 251

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           D   ++A+K FQ +  LDP G+V   T+  + 
Sbjct: 252 DLETDAAMKKFQAQKRLDPDGLVGPITITELG 283


>gi|15218963|ref|NP_176205.1| matrixin family protein [Arabidopsis thaliana]
 gi|4249376|gb|AAD14473.1| Strong similarity to gi|2829864 F3I6.6 zinc metalloproteinase
           homolog from Arabidopsis thaliana BAC gb|AC002396. EST
           gb|Z26412 comes from this gene
 gi|51971615|dbj|BAD44472.1| predicted GPI-anchored protein [Arabidopsis thaliana]
 gi|94442451|gb|ABF19013.1| At1g59970 [Arabidopsis thaliana]
 gi|332195524|gb|AEE33645.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 360

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 89  LSRGGWPELPIRPL---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            ++  W       L   H+G +   + +L++     G +  +   +  FD  ++SA+  +
Sbjct: 37  ATQNAWETFS--KLAGCHIGENINGLSKLKQYFRRFGYITTTGNCTDDFDDVLQSAINTY 94

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q    L  +G +DSSTL  +  P
Sbjct: 95  QKNFNLKVTGKLDSSTLRQIVKP 117


>gi|223982820|ref|ZP_03633044.1| hypothetical protein HOLDEFILI_00318 [Holdemania filiformis DSM
           12042]
 gi|223965219|gb|EEF69507.1| hypothetical protein HOLDEFILI_00318 [Holdemania filiformis DSM
           12042]
          Length = 543

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 20/151 (13%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
           G   V++P     + +  N  + S   +  +      D  ++   P++   T +   +  
Sbjct: 393 GSVQVQRPFADGSVLKYTNSRWLSPNEEWINGVGITPDQIVE-LPPVLQTTTASFMMEED 451

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             Y                  L   S  V   ++ L       P+      FDA    A+
Sbjct: 452 ESY-----------------TLDQVSEHVASAQKALAFLDY--PAGRSDGYFDASTAQAL 492

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           + +Q  H L+ SG++D++TL+++   V  R 
Sbjct: 493 RWYQSEHNLEASGVLDAATLQSLVSGVRYRW 523


>gi|254470560|ref|ZP_05083964.1| N-acetylmuramoyl-L-alanine amidase [Pseudovibrio sp. JE062]
 gi|211960871|gb|EEA96067.1| N-acetylmuramoyl-L-alanine amidase [Pseudovibrio sp. JE062]
          Length = 252

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLE 163
           G+    ++ L+  L + G       +S  FD     AV+ FQ         G+ D+ T+ 
Sbjct: 184 GDEGQPIEALQSLLGLYGY---DVMVSGVFDEKTRFAVEAFQRHFRPAKVDGIADAQTIA 240


>gi|15965043|ref|NP_385396.1| hypothetical protein SMc01374 [Sinorhizobium meliloti 1021]
 gi|307301115|ref|ZP_07580884.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
 gi|15074222|emb|CAC45869.1| Hypothetical protein SMc01374 [Sinorhizobium meliloti 1021]
 gi|306904070|gb|EFN34656.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti BL225C]
          Length = 408

 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 10/137 (7%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSR 91
           V+ +             F    +R      SD+P+         +  E A+   +     
Sbjct: 136 VISDRQIAPVEVASEMLFQPSESRPKGPALSDVPLRPAIGEFNQSAVEVAMTDKRPSPVA 195

Query: 92  GGWPELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAF-DAYVESAVKLFQMR 148
               ++PIR L    G    SV+ L+  L   G      GL   F      +A++ FQ  
Sbjct: 196 SDEEKVPIRILITRRGTQ-ESVRDLQTLLNTLGY---DAGLPDGFSGPATAAAIEAFQRA 251

Query: 149 HGLDPSGMVDSSTLEAM 165
            GL   G +    +EA+
Sbjct: 252 EGLPVEGKITPELIEAV 268


>gi|327480339|gb|AEA83649.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 174

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEV 371
            Y+H TP+    +      + GCVR+RN   L   L    P   +  I E 
Sbjct: 118 IYIHGTPDCEPMSVP---LSHGCVRMRNADLL--QLFPRVPPHCQVRITEA 163


>gi|291445240|ref|ZP_06584630.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291348187|gb|EFE75091.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 486

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 14/138 (10%)

Query: 25  SLVEKPIHASVLDEIINESYHSIVNDRFDNFL-----ARVDMGIDSDIPIISKETIAQTE 79
           S++  P+   VL + +        + R D              + +  P+ + + + +  
Sbjct: 119 SVLTAPVQRKVLSDTVITRGKVAASQRLDVSGEGVGEKSSGRSVVTKAPVRTGQPL-RMG 177

Query: 80  KAIAFYQDILSRGGW---PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           + +    +I  R  +    E+P  R L  G++   V +L++ L   G    +      F 
Sbjct: 178 QLLL---EISGRPVFVLRGEVPAYRDLGPGSTGQDVSQLQQALAGLGYGSGNDRA-GTFG 233

Query: 136 AYVESAVKLFQMRHGLDP 153
              E+AV  F   HG  P
Sbjct: 234 PGTEAAVTRFYRAHGHAP 251


>gi|310816790|ref|YP_003964754.1| peptidoglycan-binding domain 1 [Ketogulonicigenium vulgare Y25]
 gi|308755525|gb|ADO43454.1| peptidoglycan-binding domain 1 [Ketogulonicigenium vulgare Y25]
          Length = 560

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 2/47 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           +RL   G       +   FD    +A++ +Q   GL  +G +D   L
Sbjct: 502 DRLNALGF--NPGTVDGVFDDETRAALRRYQEARGLPVTGYLDQQVL 546


>gi|282856102|ref|ZP_06265386.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455]
 gi|282586029|gb|EFB91313.1| ErfK/YbiS/YcfS/YnhG family [Pyramidobacter piscolens W5455]
          Length = 267

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 45/164 (27%), Gaps = 61/164 (37%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------DRQTPILHSRINRIMFNPYWV 245
           R++ ++     L   E  KV     V +G+V        D +TP  +  + +I     W 
Sbjct: 104 RWIYIDKAGFRLYLAEGNKVIDSWGVALGKVTGNKAKAGDMRTPEGNFSVQQIQDASSWT 163

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
                                  ++    D KG                           
Sbjct: 164 -----------------------HDFK--DGKGVI------------------------K 174

Query: 306 NAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           NA     I   +      +H T +P          + GC+R+RN
Sbjct: 175 NAYGPWFIRLKTGWKGIGIHGTHDPDSIGT---LASEGCIRMRN 215


>gi|271969945|ref|YP_003344141.1| hypothetical protein Sros_8763 [Streptosporangium roseum DSM 43021]
 gi|270513120|gb|ACZ91398.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 303

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/135 (9%), Positives = 32/135 (23%), Gaps = 19/135 (14%)

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
              +      + R+  + ++     +   Y   +   ++         +           
Sbjct: 166 TGWIRTGDVTLTRTTHRVEVDPEAFRFTVY---DGARVLRSGKVATGRDNTPTPPGRYFF 222

Query: 296 FIFRQDPGKINAMASTKIEFYS-----------RNNTYMHDTPEPILFNNVVRFETSGCV 344
               + P       +                       +H T +           + GCV
Sbjct: 223 TELVRPPDPRGPYGAYAFGLSGFSPTLKSFAGGPGQLAIHGTDDATAIGTR---VSHGCV 279

Query: 345 RVRNIIDLDVWLLKD 359
           RV N+     W+ K+
Sbjct: 280 RVANVD--ITWMAKN 292


>gi|154245840|ref|YP_001416798.1| N-acetylmuramoyl-L-alanine amidase [Xanthobacter autotrophicus Py2]
 gi|154159925|gb|ABS67141.1| N-acetylmuramoyl-L-alanine amidase family 2 [Xanthobacter
           autotrophicus Py2]
          Length = 265

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 19/110 (17%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPE---------LPIRPLH------LGNSSVSVQR 113
           I +   +A ++ A A  +D      W           +P   +       LG++   V  
Sbjct: 141 IRADRVLAHSDVAPARKRDPGENFPWGALHAAGIGHLVPPSRVEGGRFFMLGDAGEPVAA 200

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTL 162
           L+  L + G       L+ A+DA     V  FQ         G+ D++T+
Sbjct: 201 LKAMLALYGY---GIELTDAYDAETADVVAAFQRHFRPAKVDGVADAATI 247


>gi|92117827|ref|YP_577556.1| lytic murein transglycosylase [Nitrobacter hamburgensis X14]
 gi|91800721|gb|ABE63096.1| Lytic murein transglycosylase [Nitrobacter hamburgensis X14]
          Length = 407

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             VQ ++ RL  +G    + G           AVK FQ R GL   G      L  +  
Sbjct: 349 AEVQEVQTRLTSAGF--DTGGTDGRVGNDTMKAVKDFQTRVGLPADGYAGLEVLARLRR 405


>gi|218531228|ref|YP_002422044.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
 gi|218523531|gb|ACK84116.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L+ RL   G   P  G          +A++ FQ   GL P G  D++ L+ +      
Sbjct: 356 LQTRLAALGY--PVGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRAANAP 411


>gi|297840561|ref|XP_002888162.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297334003|gb|EFH64421.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 351

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 5/83 (6%)

Query: 89  LSRGGWPELPIRPL---HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            ++  W       L   H+G +   + +L++     G +  +   +  FD  ++SA+  +
Sbjct: 26  ATQNAWETFS--KLAGCHIGENINGLSKLKQYFRRFGYITGTNNCTDDFDDVLQSAINTY 83

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q    L  +G +DSSTL  +  P
Sbjct: 84  QKNFNLKVTGKLDSSTLRQIVKP 106


>gi|91788684|ref|YP_549636.1| peptidoglycan-binding domain-containing protein [Polaromonas sp.
           JS666]
 gi|91697909|gb|ABE44738.1| Peptidoglycan-binding domain 1 [Polaromonas sp. JS666]
          Length = 556

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 5/73 (6%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S   V+ +  RL    D     G     DA + + ++ FQ+  GL   G +   T   +
Sbjct: 484 QSGPVVEWVAARLTAV-DGTAQAGRP-VLDASLRARLRTFQLAQGLPTDGRLGPLTFMQL 541

Query: 166 NVPV---DLRIRQ 175
           N      + R+R 
Sbjct: 542 NRTAGVDEPRLRT 554


>gi|186684696|ref|YP_001867892.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467148|gb|ACC82949.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 234

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTL 162
                  ++ ++E+LI  G      G    F     +AV  FQ +  L    G+V   T 
Sbjct: 170 PLMKGDDIKVVQEKLIGKGFDLGITGADGFFGQATANAVIKFQDQEDLDPVDGIVGDKTK 229

Query: 163 EAMN 166
           +A+ 
Sbjct: 230 KALG 233


>gi|297199334|ref|ZP_06916731.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
 gi|197715335|gb|EDY59369.1| peptidoglycan-binding membrane protein [Streptomyces sviceus ATCC
           29083]
          Length = 72

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDS 159
           L  G+    V  L  RL   G           +D  VE AV  +Q + G+  +  G+ D 
Sbjct: 2   LRRGSEGAEVVELELRLTQVGLYSRKAA--GHYDEGVEDAVAAYQWQRGVQVAEHGVYDL 59

Query: 160 STLEAMN 166
            T E + 
Sbjct: 60  VTRERLE 66


>gi|238059701|ref|ZP_04604410.1| peptidoglycan-binding protein [Micromonospora sp. ATCC 39149]
 gi|237881512|gb|EEP70340.1| peptidoglycan-binding protein [Micromonospora sp. ATCC 39149]
          Length = 444

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 10/127 (7%)

Query: 59  VDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL-------PIRPLHLGNSSVSV 111
            D    S +P      +  T   ++  + + +  G P +         R L  G      
Sbjct: 155 PDRTAASRLPGTITA-LPDTGATVSRGRALYAVDGDPVVLLYGKLPAYRMLQPGVEGPDA 213

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
            +    L   G       +   + +    AV+ +Q   G+  +G V+   +   + PV +
Sbjct: 214 AQFERNLKALGY--SGFTVDDEYTSATADAVRAWQDDLGVAETGRVEPGRIGYADGPVRV 271

Query: 172 RIRQLQV 178
              QL +
Sbjct: 272 EGHQLDL 278


>gi|119383559|ref|YP_914615.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
 gi|119373326|gb|ABL68919.1| ErfK/YbiS/YcfS/YnhG family protein [Paracoccus denitrificans
           PD1222]
          Length = 248

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 58/211 (27%), Gaps = 44/211 (20%)

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTP 229
            +R   L     R +           ++V+  A  L  V      +R  V VG+  +   
Sbjct: 51  AVRTAYLTERNRRQRVPYNGPEAAGTIVVDPYARFLYHVLGNGEAMRYGVAVGQAGKN-F 109

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWN 289
              + + R    P W    ++++                                     
Sbjct: 110 QGTASVGRKHAWPSWTPTANMVRT-----------------------------------Q 134

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                        G  N + S  +      R+  Y +H T +P          ++GC+R+
Sbjct: 135 PELYGPLKGGLRGGVDNPLGSRALYLYKGGRDTMYRIHGTMDPSSIGK---ATSAGCIRL 191

Query: 347 --RNIIDLDVWLLKDTPTWSRYHIEEVVKTR 375
             ++I+DL   +   T    R   E      
Sbjct: 192 FNQDIMDLFHDIPNGTTVKVRTQAESRALEG 222


>gi|328552256|gb|AEB22748.1| hypothetical protein BAMTA208_02805 [Bacillus amyloliquefaciens
           TA208]
          Length = 761

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 70  ISKETIAQTEKAIAFYQDILSRGGW--PELPIR--PLHLGNSSVS-VQRLRERLIISGDL 124
            S++T      A+   + I    G   P    +   + +G++  + V+ L+  L  +   
Sbjct: 173 YSRQTNEALIYALQVEEGIAEPTGTFGPATKSKCPTISMGSTKANFVKLLQYALYCNN-- 230

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                    FD  + +A+  FQ        G+    T  ++ V    
Sbjct: 231 RNPGRFDGIFDENMRTALIDFQRFSAFPADGVAGMQTWASLLVSKGD 277



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAM 165
            +  L+  L   G      G +  +    ++A+K FQ   GL +  G+      +A+
Sbjct: 81  QIMILQGALYCKGY--NPTGFTGTYGDGTKAAIKKFQTDAGLSNQDGIATPIIFKAL 135


>gi|284041696|ref|YP_003392036.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283945917|gb|ADB48661.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 605

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 95  PELPI-RPLHLG-NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             +P  R L  G +    V++L + L   G       +   F +    AV+ +Q    L 
Sbjct: 125 GTVPAWRTLKEGIDDGEDVRQLEQNLAALGY--DPGTVDDDFTSSTADAVERWQDAWDLK 182

Query: 153 PSGMV 157
            +G V
Sbjct: 183 ETGEV 187


>gi|260576431|ref|ZP_05844421.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
 gi|259021314|gb|EEW24620.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
          Length = 243

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 294 PNFIFRQDPGKINAMASTKIEFY-SRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RN 348
            ++      G  N + +  +  Y + ++TY  +H T +        R  ++GC+R+  ++
Sbjct: 130 RDYAGGLPGGLSNPLGARAMYLYRNGHDTYFRIHGTSDVTSIG---RATSAGCIRLFNQD 186

Query: 349 IIDL 352
            IDL
Sbjct: 187 AIDL 190


>gi|89095508|ref|ZP_01168415.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
 gi|89080228|gb|EAR59493.1| ErfK/YbiS/YcfS/YnhG protein [Oceanospirillum sp. MED92]
          Length = 159

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            Y+H TP+           + GCVR+RN  DL     + TP 
Sbjct: 115 IYIHGTPDSEPMGVP---LSHGCVRMRN-TDLLELFDQVTPG 152


>gi|307324793|ref|ZP_07603999.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces violaceusniger Tu 4113]
 gi|306889675|gb|EFN20655.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Streptomyces violaceusniger Tu 4113]
          Length = 391

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ---MRHGLDPSGMVD 158
             +G SS  +  + +RLI  G           ++     +   +Q     HG D  G+  
Sbjct: 232 FRVGRSSPVISAVAKRLIAEGCDSYDTPPGQVWNDAHRRSYAAYQIKRGHHGADADGIPG 291

Query: 159 SSTLEAMNVP 168
             T   + VP
Sbjct: 292 PETWADLRVP 301


>gi|83952512|ref|ZP_00961243.1| hypothetical protein ISM_10181 [Roseovarius nubinhibens ISM]
 gi|83836185|gb|EAP75483.1| hypothetical protein ISM_10181 [Roseovarius nubinhibens ISM]
          Length = 215

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 52/164 (31%), Gaps = 44/164 (26%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           V+  A  L  ++     +R  V + R +   P     I R    P W    ++I      
Sbjct: 78  VDAVARYLYHIQPDGTAMRYGVAIARGNLYEP-GTYSIRRKAKWPTWTPTANMI------ 130

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-- 315
             ++DP     +     D                         D G  N + S  +    
Sbjct: 131 --KRDPHLYAQH----ADG-----------------------MDAGPNNPLGSRALYLYV 161

Query: 316 YSRNNTY-MHDTPEPILFNNVVRFETSGCVR--VRNIIDLDVWL 356
            +R+    +H +P         R  +SGCVR  + +I DL   +
Sbjct: 162 GNRDTYLRIHGSPNQRSIG--GRA-SSGCVRMVMAHINDLYEHV 202


>gi|288960163|ref|YP_003450503.1| hypothetical protein AZL_a04280 [Azospirillum sp. B510]
 gi|288912471|dbj|BAI73959.1| hypothetical protein AZL_a04280 [Azospirillum sp. B510]
          Length = 257

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V+ +++ L    D      +   + A    A+  FQ  +GL  +G  D  T+ A+N
Sbjct: 143 SHEQVREIQQALNDRTD-GRDIAVDGVWGAGTRRALMRFQRDNGLRATGRADQQTMAALN 201


>gi|296113544|ref|YP_003627482.1| hypothetical protein MCR_1329 [Moraxella catarrhalis RH4]
 gi|295921238|gb|ADG61589.1| conserved hypothetical protein [Moraxella catarrhalis RH4]
 gi|326559547|gb|EGE09961.1| hypothetical protein E9G_08341 [Moraxella catarrhalis 7169]
 gi|326562715|gb|EGE13017.1| hypothetical protein E9K_07151 [Moraxella catarrhalis 103P14B1]
 gi|326564649|gb|EGE14867.1| hypothetical protein E9M_00831 [Moraxella catarrhalis 46P47B1]
 gi|326565465|gb|EGE15636.1| hypothetical protein E9O_03999 [Moraxella catarrhalis 12P80B1]
 gi|326567770|gb|EGE17876.1| hypothetical protein E9Q_05239 [Moraxella catarrhalis BC1]
 gi|326568593|gb|EGE18664.1| hypothetical protein E9S_07510 [Moraxella catarrhalis BC7]
 gi|326568718|gb|EGE18788.1| hypothetical protein E9U_08123 [Moraxella catarrhalis BC8]
 gi|326572587|gb|EGE22576.1| hypothetical protein E9W_09132 [Moraxella catarrhalis CO72]
 gi|326574183|gb|EGE24131.1| hypothetical protein E9Y_06704 [Moraxella catarrhalis 101P30B1]
 gi|326575622|gb|EGE25546.1| hypothetical protein EA1_06418 [Moraxella catarrhalis O35E]
          Length = 166

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
            Y+H TP+       +   + GCVR+R I ++  WL           I+
Sbjct: 123 IYIHGTPDTEPMGRPM---SHGCVRMR-IDEIV-WLFDKVEVGDLVLIQ 166


>gi|332669658|ref|YP_004452666.1| hypothetical protein Celf_1144 [Cellulomonas fimi ATCC 484]
 gi|332338696|gb|AEE45279.1| hypothetical protein Celf_1144 [Cellulomonas fimi ATCC 484]
          Length = 547

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL-FQM 147
             R L  G S   V +L++ L   G +D     S  +DA   +AV+  +Q 
Sbjct: 124 TYRSLRAGVSGPDVAQLKQALTSLG-IDVGDAGSATYDARTAAAVRALYQR 173


>gi|284045782|ref|YP_003396122.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283950003|gb|ADB52747.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 274

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 23/97 (23%), Gaps = 20/97 (20%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-----------SRNNTYMHDT 326
           G+ V                  + P          +                    +H T
Sbjct: 180 GRAVSPTPTGRYFVA----DLLRPPNPTGFYGPYALGLSAYSPVYTRFAGGDGQVGIHGT 235

Query: 327 PEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDTP 361
             P +  +     + GC+RV N     L   +   TP
Sbjct: 236 NTPRVLGSD---VSHGCIRVSNATVTRLATLVPLGTP 269


>gi|229087658|ref|ZP_04219785.1| Carboxyl-terminal protease [Bacillus cereus Rock3-44]
 gi|228695652|gb|EEL48510.1| Carboxyl-terminal protease [Bacillus cereus Rock3-44]
          Length = 494

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L    + V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNANDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEVTGQLDK 462

Query: 160 STLEAMNVPVDLRIRQLQVNLM 181
            T EA+   +  +IR  + ++ 
Sbjct: 463 KTAEALQNKIIEKIRSGENDMQ 484


>gi|153871209|ref|ZP_02000438.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
 gi|152072323|gb|EDN69560.1| ErfK/YbiS/YcfS/YnhG family protein [Beggiatoa sp. PS]
          Length = 217

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 36/168 (21%)

Query: 208 VENGKVGLRSTVIVGRVD-------RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLR 260
             + +      V   +          +TP+   RI   + +          QK M+   R
Sbjct: 77  YSDHEEIKTYPVSTSKYGIGSEAGSNKTPLGAHRIKDKIGDG--------AQKGMIFKAR 128

Query: 261 QDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN 320
           +    + + N+      G  V    + W             PG              +  
Sbjct: 129 RSTGQIAEMNVE---GAGDLVT-TRIMW--LTGLEQGANSGPGID----------SYQRY 172

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRY 366
            Y+H T E           + GC+R+ N  +I+L   + + T    R 
Sbjct: 173 IYIHGTGEENKIGQP---ASHGCIRMYNDDVINLFDLVTEGTEVHIRE 217


>gi|255083567|ref|XP_002508358.1| predicted protein [Micromonas sp. RCC299]
 gi|226523635|gb|ACO69616.1| predicted protein [Micromonas sp. RCC299]
          Length = 294

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 20/50 (40%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                V+ L+  L          G +  FD     AVK +Q +HG+  SG
Sbjct: 106 MRGDEVKELQRFLQEESFFMHRGGPTGHFDRETRDAVKAWQRKHGVVQSG 155


>gi|89067450|ref|ZP_01154963.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           granulosus HTCC2516]
 gi|89047019|gb|EAR53073.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           granulosus HTCC2516]
          Length = 188

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 52/187 (27%), Gaps = 45/187 (24%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQK-MGLRYVLVNIPAASLEAVE-NGKVGLRSTVIV 221
            +   +   IR+   +   +        +    +L +I + +L     +  +       V
Sbjct: 26  EIEQDISQTIRRNISSFRSLDWRPYFTSLENGAILCDIQSRALHYWSPDAAIYKLYPTSV 85

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              D  T +  + +   +  P W    S+           +P                  
Sbjct: 86  PLSDDLTRLGRTEVVHKVEGPEWRPTPSMRAN--------NP------------------ 119

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                DW +           PG  N + +  +    +    +H T +        R  ++
Sbjct: 120 -----DWPTYVG--------PGPDNPLGTHALYLSWQY-YRIHGTHDTRKIG---RRSSN 162

Query: 342 GCVRVRN 348
           GC+ + N
Sbjct: 163 GCIGLYN 169


>gi|85717364|ref|ZP_01048316.1| Lytic murein transglycosylase [Nitrobacter sp. Nb-311A]
 gi|85695839|gb|EAQ33745.1| Lytic murein transglycosylase [Nitrobacter sp. Nb-311A]
          Length = 407

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             VQ ++ RL  +G    + G           AVK FQ R GL P G      L  +  
Sbjct: 349 AEVQEVQTRLTKAGF--DTGGTDGRVGNDTMKAVKDFQTRAGLPPDGYAGLKVLSKLRQ 405


>gi|83858925|ref|ZP_00952447.1| N-acetylmuramoyl-L-alanine amidase [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853748|gb|EAP91600.1| N-acetylmuramoyl-L-alanine amidase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 245

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 92  GGWP-ELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           G WP   P    P   G+   +V+ LR+ L   G        + A+D  ++S V  FQ R
Sbjct: 157 GLWPDPAPAGFAPSAPGDDGEAVEALRQSLFEIGY---GVARTGAYDDALKSVVLAFQRR 213

Query: 149 H 149
            
Sbjct: 214 F 214


>gi|258655247|ref|YP_003204403.1| transglycosylase [Nakamurella multipartita DSM 44233]
 gi|258558472|gb|ACV81414.1| Transglycosylase domain protein [Nakamurella multipartita DSM
           44233]
          Length = 317

 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           + +   P  P R    G++++ +Q  +++L   G        +  +    ++AV   Q  
Sbjct: 240 VGQPTAPAWPGRQFVQGDTALELQCFQKQLASRGY---PLTGTGYYGPATKTAVVQLQNA 296

Query: 149 HGLDPSGMVDSSTLEAM 165
           +G++PSG++   T  A 
Sbjct: 297 NGINPSGILGPKTWAAA 313



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P R    G+ S  ++  ++++   G        +  F    ++AV   Q + GL+  
Sbjct: 145 PAYPGRQFSEGDYSEDLKAWQKQMGTRGY---DLVGTGYFGPKTKAAVLDLQAKAGLNVV 201

Query: 155 GMVDSSTL 162
           G +   T 
Sbjct: 202 GYIGPKTW 209


>gi|188583441|ref|YP_001926886.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179346939|gb|ACB82351.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 252

 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 2/74 (2%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP--SGMVDSSTLEAMNVP 168
           V  ++  L+  G      G   A      +AV  FQ    LD    G +   T+ A+ V 
Sbjct: 3   VAEIQRALLARGYDLGPSGADNALGRLTIAAVTAFQKAEKLDILYPGTIGPKTIAALGVS 62

Query: 169 VDLRIRQLQVNLMR 182
               +    +   R
Sbjct: 63  AAGPVAPPWIAEAR 76


>gi|297824541|ref|XP_002880153.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297325992|gb|EFH56412.1| matrix metalloproteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 336

 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            VS+  ++  L   G L          D   E A+  +Q   GL  +G  DS TL  + +
Sbjct: 40  DVSIPEIKRHLQQYGYLPQKNEPD---DVSFEQALARYQKNLGLPITGKPDSDTLSQILL 96

Query: 168 P 168
           P
Sbjct: 97  P 97


>gi|315498862|ref|YP_004087666.1| n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampd
           [Asticcacaulis excentricus CB 48]
 gi|315416874|gb|ADU13515.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Asticcacaulis excentricus CB 48]
          Length = 245

 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 15/91 (16%)

Query: 80  KAIAFYQDILSRGGW--PELP-----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV 132
           +A+A        G W  P +P       PL +G++   V  L+  L   G          
Sbjct: 147 QALAE----AGHGLWVDPPVPPEGVMGPPLDIGDTGPGVFALQGALGKLGY---DILPGG 199

Query: 133 AFDAYVESAVKLFQMRHGLD-PSGMVDSSTL 162
            +DA  ++ +  FQ         G  D+ T 
Sbjct: 200 PYDAETQAIITAFQRHWVQTRIDGKADALTR 230


>gi|328906347|gb|EGG26122.1| YkuG protein [Propionibacterium sp. P08]
          Length = 792

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 18/147 (12%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPI---ISKETIAQTEKAIAFYQDILS---RGGW- 94
           +     +    +           + IP     S++      KA+     I      G + 
Sbjct: 154 DPEIRKIQQWLNGRY--WRRSFATLIPTEGHYSRDVQKLLMKALQCEFGIADASVNGNFG 211

Query: 95  ----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLF 145
                +L    L  G+S V V+ L    + +G +   +G+        FD  + S ++ F
Sbjct: 212 PATRQQLAAHSLKPGDSGVLVELLSAACVFNGAVPSGEGMVHTVFKHEFDDKLASYIRAF 271

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           Q    L  +  VD +T   + V     
Sbjct: 272 QAFSLLPVTNRVDYATWCQLLVSTGDP 298


>gi|146342507|ref|YP_001207555.1| N-acetylmuramoyl-L-alanine amidase [Bradyrhizobium sp. ORS278]
 gi|146195313|emb|CAL79338.1| putative 1:N-acetylmuramoyl-L-alanine amidase (family 2) with
           peptidoglycan binding domain [Bradyrhizobium sp. ORS278]
          Length = 283

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 92  GGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W +         L LG+    V+ L++ L   G       ++  FD      V  FQ 
Sbjct: 192 GHWVQPAAITKGETLKLGSIGDDVKGLQKALAKYGY---GVPITGKFDGLTMEVVTAFQR 248

Query: 148 RHGLD-PSGMVDSSTL 162
               +   G+ D STL
Sbjct: 249 HFRPERVDGIADRSTL 264


>gi|313836153|gb|EFS73867.1| conserved hypothetical protein [Propionibacterium acnes HL037PA2]
 gi|314927591|gb|EFS91422.1| conserved hypothetical protein [Propionibacterium acnes HL044PA1]
 gi|314971413|gb|EFT15511.1| conserved hypothetical protein [Propionibacterium acnes HL037PA3]
          Length = 792

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 48/147 (32%), Gaps = 18/147 (12%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPI---ISKETIAQTEKAIAFYQDILS---RGGW- 94
           +     +    +           + IP     S++      KA+     I      G + 
Sbjct: 154 DPEIRKIQQWLNGRY--WRRSFATLIPTEGHYSRDVQKLLMKALQCEFGIADASVNGNFG 211

Query: 95  ----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLF 145
                +L    L  G+S V V+ L    + +G +   +G+        FD  + S ++ F
Sbjct: 212 PATRQQLAAHSLKPGDSGVLVELLSAACVFNGAVPSGEGMVHTVFKHEFDDKLASYIRAF 271

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           Q    L  +  VD +T   + V     
Sbjct: 272 QAFSLLPVTNRVDYATWCQLLVSTGDP 298


>gi|302531832|ref|ZP_07284174.1| hypothetical protein SSMG_08214 [Streptomyces sp. AA4]
 gi|302440727|gb|EFL12543.1| hypothetical protein SSMG_08214 [Streptomyces sp. AA4]
          Length = 245

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 17/55 (30%), Gaps = 2/55 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              V  ++  L   G       +   F    E AVK FQ   G    G V   T 
Sbjct: 188 GEDVAEVQCLLKRHG--RDPGRVDGLFGERTEQAVKDFQRAAGAVVDGKVGPQTW 240


>gi|225181547|ref|ZP_03734989.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT
           1]
 gi|225167795|gb|EEG76604.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiobacter alkaliphilus AHT
           1]
          Length = 172

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 18/138 (13%)

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMID-EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
           + + ++  L+++   Y +           GK      +   S    N      P     +
Sbjct: 1   MTRIEINRLMKKLTFYHQGQYYKTYPIAIGKPDTPTPLGEFSVYEKN------PRPHQML 54

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
            +  + F  + +  +H T  P          T+GCVR+ N       L   TP  +   I
Sbjct: 55  GTRWMAFTYQRH-GIHGTFNPWTIGT---AATAGCVRMYNED--VEELFPLTPIGTPVII 108

Query: 369 EEVVKTRKTTPVKLATEV 386
            E     K   VK+   +
Sbjct: 109 FE-----KEEKVKIPEHI 121


>gi|149377700|ref|ZP_01895435.1| hypothetical protein MDG893_12425 [Marinobacter algicola DG893]
 gi|149357985|gb|EDM46472.1| hypothetical protein MDG893_12425 [Marinobacter algicola DG893]
          Length = 122

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+  L  +G       +S   D    SA+  FQ   GL+ SG++D +T +A+ +
Sbjct: 15  VALKNALYAAGY--DINNVSPQMDDSTRSALTAFQKDQGLNASGVLDDATKKALGM 68


>gi|293606325|ref|ZP_06688686.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
 gi|292815320|gb|EFF74440.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
          Length = 529

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 26/76 (34%), Gaps = 2/76 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S   +++L+E L   G             A    AV+  Q R  L   G V    L+
Sbjct: 456 PGLSRAEIKQLQEELYGRGYDVGEA--DGIPGAKTRDAVRAEQERRNLPQDGRVGKRILD 513

Query: 164 AMNVPVDLRIRQLQVN 179
           A+       +R    N
Sbjct: 514 ALKADKPDALRARPAN 529


>gi|281201085|gb|EFA75299.1| hypothetical protein PPL_11375 [Polysphondylium pallidum PN500]
          Length = 889

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 12/65 (18%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG------------LDPSGMVD 158
           V+ ++  L     L     +   +D  + +AVK FQ                L   G +D
Sbjct: 390 VKEIQAALSHLNYLPLLTKIDGQYDQKLINAVKAFQTDFNKRNNAAKDKDQMLQVEGYID 449

Query: 159 SSTLE 163
            +T +
Sbjct: 450 QNTFK 454


>gi|84683541|ref|ZP_01011444.1| hypothetical protein 1099457000264_RB2654_19248 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668284|gb|EAQ14751.1| hypothetical protein RB2654_19248 [Rhodobacterales bacterium
           HTCC2654]
          Length = 238

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 80/271 (29%), Gaps = 70/271 (25%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV----DSST 161
                + +L   L ++G L   + +        E+AV           +G V       T
Sbjct: 1   MIGKRIVKLVAGLALAGVLAACETVP------TETAV---------TSNGEVLPFVSPRT 45

Query: 162 LEAMN-------VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           L           V   +  + L   + R             ++V+  A  L  +      
Sbjct: 46  LSMYREFDDGQFVVPAVPRQYLSEEVARQYVPYYSPYAEGTIVVDPYAFKLYLISGPNEA 105

Query: 215 LRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMI 274
           +R +V VG+         +R+N     PYW    ++++++                    
Sbjct: 106 MRYSVGVGKAGFGL-TGEARVNHQKDWPYWTPTANMLRREP------------------- 145

Query: 275 DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPIL 331
                            +        + G  N + +  +      R+  Y +H TP P  
Sbjct: 146 ----------------EKYGPVRGGMEGGLDNPLGARALYLYRGGRDTLYRIHGTPYPWT 189

Query: 332 FNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                  E+ GC+R+  ++ I L   +   T
Sbjct: 190 VG---GQESGGCIRMFHQDAIHLAANVENGT 217


>gi|307266055|ref|ZP_07547601.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918924|gb|EFN49152.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 350

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ      P G+V   T  A
Sbjct: 42  GTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRYKNFVPDGIVGPKTYAA 99

Query: 165 MNV 167
           +  
Sbjct: 100 LET 102


>gi|227495720|ref|ZP_03926031.1| phage integrase [Actinomyces urogenitalis DSM 15434]
 gi|226834740|gb|EEH67123.1| phage integrase [Actinomyces urogenitalis DSM 15434]
          Length = 448

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +      FD     AV  +Q+RHGL+ SG VD  T EA+  
Sbjct: 308 ATARRGPVFDRETVDAVASWQLRHGLEASGRVDRPTWEALTR 349


>gi|91794173|ref|YP_563824.1| peptidoglycan binding domain-containing protein [Shewanella
           denitrificans OS217]
 gi|91716175|gb|ABE56101.1| Peptidoglycan-binding domain 1 [Shewanella denitrificans OS217]
          Length = 572

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+    VQ L   L           L   FD  +E  +  FQ +HGL   G+  S TL  
Sbjct: 492 GSHLSQVQWLENNLAKIN--GRQARLMDDFDHELERELMAFQRQHGLKADGIAGSQTLVQ 549

Query: 165 MN 166
           +N
Sbjct: 550 LN 551


>gi|317132365|ref|YP_004091679.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
           YUAN-3]
 gi|315470344|gb|ADU26948.1| ErfK/YbiS/YcfS/YnhG family protein [Ethanoligenens harbinense
           YUAN-3]
          Length = 235

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA-YVESAVKLFQMRHGLDPSGMVD 158
           R +  G     V  +++RL   G  D     +  +D+     AV  F+   GL PS  + 
Sbjct: 165 RTIGPGMYGQDVLAVQKRLHDLGYFD--GICNGRYDSWGFHQAVLRFEKDRGLPPSDRIA 222

Query: 159 SSTLEAMN 166
           S+  +A+ 
Sbjct: 223 SAFYKALG 230



 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 31/127 (24%), Gaps = 16/127 (12%)

Query: 255 MMALLRQDPQYLKDNNIHMIDEK---GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
           ++  ++++   L  N           GKE                      G+       
Sbjct: 47  ILIQVQENRLSLFKNGKLYRSYSCATGKEDTPSPCGTFQINRKARW-----GEG--FGGY 99

Query: 312 KIEFYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
            +          +H T  P          + GC R+  ++I  L   +   T       +
Sbjct: 100 FLGLNCPWGNYGIHGTTRPDSVGQPS---SHGCFRMYGKDIRALYSLVPCGTTVLIVNGV 156

Query: 369 EEVVKTR 375
                T 
Sbjct: 157 YGAFGTG 163


>gi|260462601|ref|ZP_05810807.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031507|gb|EEW32777.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 192

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 40/139 (28%), Gaps = 20/139 (14%)

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQK------DMMALLRQDPQYLKDNNIHMIDEKGKE 280
             P +   + + +       P +II +       ++    Q  +Y            G  
Sbjct: 38  PLPAMGPSLRKTVAFETAEQPGTIIIRKDEKALYLVTRQGQALRYKISVGRDGFGWTGVV 97

Query: 281 VFVEEVDWNSPEPPN--------FIFRQDPGKINAMASTKIEFYSR--NNTY-MHDTPEP 329
               + +W    PP                G  N + +  +       +  Y +H T +P
Sbjct: 98  KVGAKTEWPQWRPPKEMRARQPELPEMVPAGPYNPLGARALYLSRDGHDTLYRIHGTNDP 157

Query: 330 ILFNNVVRFETSGCVRVRN 348
                     TSGC R+ N
Sbjct: 158 SGVGFDG---TSGCFRLTN 173


>gi|224367146|ref|YP_002601309.1| putative secretion activating protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223689862|gb|ACN13145.1| putative secretion activating protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 247

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 8/72 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R +  G+  + V++L+E L I         +   F    E+ +K +Q  +GL+P 
Sbjct: 181 PSVDYRIVKKGSRGLWVRKLQEALKI--------QVDGRFTGDTEATLKAWQQANGLEPD 232

Query: 155 GMVDSSTLEAMN 166
           G+   +T  ++ 
Sbjct: 233 GIAGRNTYRSLG 244


>gi|85707011|ref|ZP_01038100.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
 gi|85668452|gb|EAQ23324.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
          Length = 196

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 26/83 (31%), Gaps = 4/83 (4%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHD 325
           L       + +K +              P +     PG  N + +  +    +    +H 
Sbjct: 99  LTKRGYTSVIKKVEGPSWRPTPSMKIRNPEWPDYFPPGPDNPLGTHALYLSWQY-YRVHG 157

Query: 326 TPEPILFNNVVRFETSGCVRVRN 348
           T +        R  ++GC+ + N
Sbjct: 158 TGDTRKIG---RRSSNGCIGLYN 177


>gi|167039606|ref|YP_001662591.1| peptidoglycan binding domain-containing protein [Thermoanaerobacter
           sp. X514]
 gi|300915144|ref|ZP_07132459.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307725068|ref|YP_003904819.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
 gi|166853846|gb|ABY92255.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X514]
 gi|300888868|gb|EFK84015.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X561]
 gi|307582129|gb|ADN55528.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter sp.
           X513]
          Length = 422

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V+ L+  L  +G    +  +   F     + V  FQ    L P G+V      A
Sbjct: 47  GTYGTDVEELQAMLNKAGF--DTGTVDGIFGKMTLNGVLDFQRSKNLVPDGIVGPKIYAA 104

Query: 165 MNV 167
           +  
Sbjct: 105 LET 107


>gi|71066184|ref|YP_264911.1| hypothetical protein Psyc_1629 [Psychrobacter arcticus 273-4]
 gi|71039169|gb|AAZ19477.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 173

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 5/38 (13%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            Y+H TP+           + GCVR+RN  II+L   +
Sbjct: 126 IYIHGTPDSEPMGIP---LSHGCVRMRNQDIIELFEQV 160


>gi|229020392|ref|ZP_04177148.1| Carboxyl-terminal protease [Bacillus cereus AH1273]
 gi|228740927|gb|EEL91169.1| Carboxyl-terminal protease [Bacillus cereus AH1273]
          Length = 263

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 174 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEIEATGQLDK 231

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 232 KTAEAIQNKIIEKIRS 247


>gi|229026622|ref|ZP_04182964.1| Carboxyl-terminal protease [Bacillus cereus AH1272]
 gi|228734655|gb|EEL85307.1| Carboxyl-terminal protease [Bacillus cereus AH1272]
          Length = 494

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEIEATGQLDK 462

Query: 160 STLEAMNVPVDLRIRQ 175
            T EA+   +  +IR 
Sbjct: 463 KTAEAIQNKIIEKIRS 478


>gi|163748159|ref|ZP_02155465.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|161378564|gb|EDQ03027.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 166

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 47/162 (29%), Gaps = 18/162 (11%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             + +    V  NI    + + ++    LR+  I+  +D +     S    +       +
Sbjct: 4   TSEGLAAPAVRSNISGFRVASWQDHFDNLRNGAILCDIDSRAVQFWSEDENVYKLYPSSV 63

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P +              + L       I  K                P +     PG  N
Sbjct: 64  PLT--------------EELTRRGYTEIVRKVDGPSWRPTPSMKERNPEWPDFVGPGPDN 109

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            + +  +    +    +H T +        R  ++GC+ + N
Sbjct: 110 PLGTHALYLSWQY-YRVHGTGDTRKIG---RQSSNGCIGLYN 147


>gi|209518462|ref|ZP_03267284.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
 gi|209501095|gb|EEA01129.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. H160]
          Length = 362

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V +++ +L   G   P              A+K FQ   GL  +G  DS+T+ A++ 
Sbjct: 308 VAQMQAKLNALGF--PVGTPDGHMGNRTRRALKYFQKSQGLPQTGEPDSATVAALSQ 362


>gi|304316029|ref|YP_003851174.1| peptidoglycan-binding protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777531|gb|ADL68090.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 418

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V +L+  L   G    +  +   F       V  FQ    L   G+V S T  A
Sbjct: 43  GTYGTDVLKLQSILNNIGF--DTGIIDGIFGNNTLKGVLNFQKAENLVADGIVGSKTYSA 100

Query: 165 MN 166
           + 
Sbjct: 101 IQ 102


>gi|222629200|gb|EEE61332.1| hypothetical protein OsJ_15450 [Oryza sativa Japonica Group]
          Length = 367

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L +G     V+ ++E L   G     + +   +F +  E AVK +Q    +  SG++ 
Sbjct: 162 RTLRVGAEGEDVRAMQEALEKLGYYSGEEDMEFSSFSSGTERAVKTWQATVRVSESGIMT 221

Query: 159 SSTLE 163
           S  L+
Sbjct: 222 SDLLD 226


>gi|163745084|ref|ZP_02152444.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|161381902|gb|EDQ06311.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 183

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 47/193 (24%)

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLR 216
           D++T    ++   ++       ++  +           VLV+I + ++    E+  V   
Sbjct: 17  DATTEAERDLTDAVKRNVSSFRMLDWRPYFSNTRNG-AVLVDIDSRAVHYWSEDQSVYKL 75

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
               V   +  T    + I + +  P W    S+        L+++P++           
Sbjct: 76  YPSSVPLTEDLTRRGRTSIIKKVEGPSWRPTPSM--------LKRNPEW----------- 116

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNV 335
                                    PG  N + +  +        Y +H T +       
Sbjct: 117 --------------------PPYVGPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG-- 152

Query: 336 VRFETSGCVRVRN 348
            R  ++GC+ + N
Sbjct: 153 -RKSSNGCIGLYN 164


>gi|115459412|ref|NP_001053306.1| Os04g0514400 [Oryza sativa Japonica Group]
 gi|38345688|emb|CAE01911.2| OSJNBb0070J16.4 [Oryza sativa Japonica Group]
 gi|113564877|dbj|BAF15220.1| Os04g0514400 [Oryza sativa Japonica Group]
 gi|116310834|emb|CAH67621.1| OSIGBa0140J09.2 [Oryza sativa Indica Group]
 gi|215697528|dbj|BAG91522.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195210|gb|EEC77637.1| hypothetical protein OsI_16629 [Oryza sativa Indica Group]
          Length = 367

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R L +G     V+ ++E L   G     + +   +F +  E AVK +Q    +  SG++ 
Sbjct: 162 RTLRVGAEGEDVRAMQEALEKLGYYSGEEDMEFSSFSSGTERAVKTWQATVRVSESGIMT 221

Query: 159 SSTLE 163
           S  L+
Sbjct: 222 SDLLD 226


>gi|254556733|ref|YP_003063150.1| carboxy-terminal processing proteinase [Lactobacillus plantarum
           JDM1]
 gi|254045660|gb|ACT62453.1| carboxy-terminal processing proteinase [Lactobacillus plantarum
           JDM1]
          Length = 492

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +V+  ++ L   G       ++  F     SAVK +Q    L  +G VD  TL  +   
Sbjct: 412 SNVKTFQKYLQALGYFK--GTVNGYFGDSTTSAVKQYQKHAKLTVNGKVDKQTLTKIETE 469

Query: 169 VDLRI 173
           +  +I
Sbjct: 470 LANKI 474


>gi|300767464|ref|ZP_07077376.1| carboxy-terminal processing protease CtpA [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308180676|ref|YP_003924804.1| carboxy-terminal processing protease CtpA [Lactobacillus plantarum
           subsp. plantarum ST-III]
 gi|300495283|gb|EFK30439.1| carboxy-terminal processing protease CtpA [Lactobacillus plantarum
           subsp. plantarum ATCC 14917]
 gi|308046167|gb|ADN98710.1| carboxy-terminal processing protease CtpA [Lactobacillus plantarum
           subsp. plantarum ST-III]
          Length = 492

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +V+  ++ L   G       ++  F     SAVK +Q    L  +G VD  TL  +   
Sbjct: 412 SNVKTFQKYLQALGYFK--GTVNGYFGDSTTSAVKQYQKHAKLTVNGKVDKQTLTKIETE 469

Query: 169 VDLRI 173
           +  +I
Sbjct: 470 LANKI 474


>gi|15895771|ref|NP_349120.1| SpoIID-like domain-containing protein [Clostridium acetobutylicum
           ATCC 824]
 gi|15025528|gb|AAK80460.1|AE007749_7 SpoIID-like domain containing protein; peptidoglycan-binding domain
           [Clostridium acetobutylicum ATCC 824]
 gi|325509921|gb|ADZ21557.1| SpoIID-like domain protein containing protein [Clostridium
           acetobutylicum EA 2018]
          Length = 1042

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 2/106 (1%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P     PL+ G +S  V  L+  LI  G    S      +    +S V   Q ++ L  +
Sbjct: 878 PLSAALPLNYGMTSGDVTNLQNALIYLGYSISSAT--GYYGTQTKSVVSSIQSQNSLPVT 935

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           G VD++TL  +N  +  +     +N   +  +          L N 
Sbjct: 936 GNVDTATLYVINSMLATKAGVKLLNFSTLPLVYGTTSSDTVNLQNT 981


>gi|28378519|ref|NP_785411.1| carboxy-terminal processing proteinase [Lactobacillus plantarum
           WCFS1]
 gi|28271355|emb|CAD64260.1| carboxy-terminal processing proteinase [Lactobacillus plantarum
           WCFS1]
          Length = 492

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +V+  ++ L   G       ++  F     SAVK +Q    L  +G VD  TL  +   
Sbjct: 412 SNVKTFQKYLQALGYFK--GTVNGYFGDSTTSAVKQYQKHAKLTVNGKVDKQTLTKIETE 469

Query: 169 VDLRI 173
           +  +I
Sbjct: 470 LANKI 474


>gi|328871644|gb|EGG20014.1| hypothetical protein DFA_07130 [Dictyostelium fasciculatum]
          Length = 434

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 23/157 (14%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI 99
           + +   S  +D F+      +  I         + I  T        +I      P L  
Sbjct: 286 LGDDRSSGEDDMFETAPEDFEEPISFLASPFLSQLIDDTNN--QNSDNI------PTLSK 337

Query: 100 RP----------LHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
                       L  G  S     ++  L   L+  G ++        + +  E A+K F
Sbjct: 338 SKRHKLSILMDSLKEGVKSSSPPEAISVLNYSLLFIGYME-DTLSKEMYTSNTEFAIKKF 396

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
           Q+ +G   +G+ D  T++++   V      +     R
Sbjct: 397 QLDNGFPETGIADFPTMKSILYKVKNSPVNILKKKER 433


>gi|154245163|ref|YP_001416121.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
 gi|154159248|gb|ABS66464.1| ErfK/YbiS/YcfS/YnhG family protein [Xanthobacter autotrophicus Py2]
          Length = 223

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 291 PEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV- 346
                +      G+ N +    +  Y  +      +H T EP          +SGC+R+ 
Sbjct: 146 ARYGPYAAGLPGGETNPLGPRALYLYDGDRDTLFRIHGTIEPWSIGQ---QVSSGCIRLL 202

Query: 347 -RNIIDLDVWLLKDT 360
            ++IIDL   +   T
Sbjct: 203 NQDIIDLYERVPLGT 217


>gi|159184494|ref|NP_353866.2| hypothetical protein Atu0844 [Agrobacterium tumefaciens str. C58]
 gi|159139803|gb|AAK86651.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 302

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 98/327 (29%), Gaps = 80/327 (24%)

Query: 53  DNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQ 112
           D      D+ +    P+ +  +++   +              PELP +    G  S    
Sbjct: 32  DTTRMDPDVFVRETAPVFNFNSVSSNRQ--------------PELPPQ---PGQLSTRPP 74

Query: 113 RL-RERLIISGDLDP------SKGLSVAFDAYVESAVKLFQ---MRHGLDPSG----MVD 158
            L R R        P             ++      V   Q   M +GL  S     ++ 
Sbjct: 75  DLFRTRFHQE-YGPPVRGQGLQAPQVQGYN------VPQAQGQTMAYGLPVSNPLHRVMY 127

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
               +       +   ++    +R +   +       ++V+     L  V++G   +R  
Sbjct: 128 GPIRDEDRSLPAIPYGRIDPRYLRQEVSYQTAEAPGTIVVDTRQHFLYLVQSGGKAIRYG 187

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
           V +GR D        +I      P W  P  ++++                         
Sbjct: 188 VGLGR-DGYAWSGRGKIQWKAKWPRWTPPDEMVKRQ------------------------ 222

Query: 279 KEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNV 335
                E    ++           PG  N + +  +      ++  Y +H TP+       
Sbjct: 223 ----PELTSISAANGGMT-----PGLNNPLGARALYIFKDGKDTLYRVHGTPDWQSVGK- 272

Query: 336 VRFETSGCVRV--RNIIDLDVWLLKDT 360
               +SGCVR+  +++IDL   + +  
Sbjct: 273 --ATSSGCVRMLNQDVIDLYERVPQGA 297


>gi|114704710|ref|ZP_01437618.1| TPR repeat [Fulvimarina pelagi HTCC2506]
 gi|114539495|gb|EAU42615.1| TPR repeat [Fulvimarina pelagi HTCC2506]
          Length = 516

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L+ RL  +GD                 A++ FQ RHG++PSG++    L  +    D   
Sbjct: 49  LQIRLAWTGDY--EGEFDGIIGPRSLRAIRDFQARHGMEPSGIISDDMLAQLVSKSDSIQ 106

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVN 199
             L +          + +     +V+
Sbjct: 107 DSLGIAFADDALTGARMLIPFNRVVD 132


>gi|153810528|ref|ZP_01963196.1| hypothetical protein RUMOBE_00909 [Ruminococcus obeum ATCC 29174]
 gi|149833707|gb|EDM88788.1| hypothetical protein RUMOBE_00909 [Ruminococcus obeum ATCC 29174]
          Length = 442

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQM-RHG-LDP 153
            + + LG++  SV  L+E LI  G    +      S   D     A+K +Q  R G L+ 
Sbjct: 368 PKLVKLGSTGTSVLLLQEILIARGFKGKNGKTLTLSRKADENTIYALKTYQKSRKGVLEA 427

Query: 154 SGMVDSSTLEAMNV 167
            G+    T + +  
Sbjct: 428 DGIAGEKTWKDLIA 441


>gi|329890511|ref|ZP_08268854.1| N-acetylmuramoyl-L-alanine amidase amiD [Brevundimonas diminuta
           ATCC 11568]
 gi|328845812|gb|EGF95376.1| N-acetylmuramoyl-L-alanine amidase amiD [Brevundimonas diminuta
           ATCC 11568]
          Length = 253

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
             PL  G+  + V  LR  L   G      G    +D      V+ FQ     D   G+ 
Sbjct: 172 GAPLSPGDEGLGVIVLRSGLHRLGYGVQPGGA---YDEETRLTVEAFQRHWRPDRVDGIA 228

Query: 158 DSSTLEAM 165
           D  T   +
Sbjct: 229 DGETRARL 236


>gi|163851109|ref|YP_001639152.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163662714|gb|ABY30081.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 264

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 46/170 (27%), Gaps = 42/170 (24%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R +    +      ++V+     L  V      LR  V VGR         +R+ R    
Sbjct: 80  RQEVAYPRAEPPGTLVVDPGRKFLYLVRENGRALRYGVGVGRAG-LAWSGSARVGRKAEW 138

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W     +I ++                    D  G         W +           
Sbjct: 139 PRWTPTAEMIAREP-------------------DRNG--------PWRNGMAG------- 164

Query: 302 PGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            G  N +    +            +H T EP          +SGC+R+ N
Sbjct: 165 -GLGNPLGPRALYLFEGPRDTLYRIHGTTEPQTIGTD---VSSGCIRMFN 210


>gi|260907624|ref|ZP_05915946.1| putative phage integrase [Brevibacterium linens BL2]
          Length = 401

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 97  LPIRPLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +  R L       S +V+RL++ L +S     S      +     +AV+  Q  +GL  +
Sbjct: 258 VSNRALKPAVELASGAVERLQDALSVSEY---SGDFFHVYGPDTVAAVERVQRENGLSVT 314

Query: 155 GMVDSSTLEAMNVPVDLR 172
           G  D++T EA+ +     
Sbjct: 315 GRADAATREAIGLDDAQH 332


>gi|118580186|ref|YP_901436.1| peptidoglycan binding domain-containing protein [Pelobacter
           propionicus DSM 2379]
 gi|118502896|gb|ABK99378.1| Peptidoglycan-binding domain 1 protein [Pelobacter propionicus DSM
           2379]
          Length = 564

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G     +  L+  L  +G       +   +     SAV+ FQ   G+  +      T
Sbjct: 488 LVPGERRKELHTLQRMLKQAGCYRQ--AIDGVYSKATISAVRRFQRSQGIPTNDSGGELT 545

Query: 162 LEAMNV-PVDLRIRQLQVN 179
           L  ++          L  N
Sbjct: 546 LALLSRLDAAQMAPSLGRN 564


>gi|171913001|ref|ZP_02928471.1| hypothetical protein VspiD_17515 [Verrucomicrobium spinosum DSM
           4136]
          Length = 201

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 49/194 (25%), Gaps = 36/194 (18%)

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNP 242
                +   G   +++ +     E     K+   + V  G+    TP    RI     + 
Sbjct: 43  YHWEGDGVQGEPSIVIYLDTQKAEFYRGKKLVGWTYVATGKPSHPTPSGKFRIIEKTPDK 102

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
              +   ++  D                  ++D        E  + +   P      Q  
Sbjct: 103 ISNLYGKLLDVDG----------------KVVDSDFNLSKEEVPEGHQFSPARMPMFQ-- 144

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
                         + +   +H  P P          + GC+RV     +      +T  
Sbjct: 145 -----------RLTN-DGVGLHVGPIP----RPGATASHGCIRV--PRYMAQKFFANTAI 186

Query: 363 WSRYHIEEVVKTRK 376
            +   I      +K
Sbjct: 187 GTPVTILAKSPDKK 200


>gi|3128477|gb|AAC31167.1| metalloproteinase [Arabidopsis thaliana]
          Length = 341

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            VS+  ++  L   G L  +K      D   E A+  +Q   GL  +G  DS TL  + +
Sbjct: 47  DVSIPEIKRHLQQYGYLPQNKESD---DVSFEQALVRYQKNLGLPITGKPDSDTLSQILL 103

Query: 168 P 168
           P
Sbjct: 104 P 104


>gi|303241052|ref|ZP_07327562.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
 gi|302591477|gb|EFL61215.1| Peptidoglycan-binding domain 1 protein [Acetivibrio cellulolyticus
           CD2]
          Length = 143

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 7/80 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG+P +       G+  V V  L++ L   G    +  +   F    +  V  FQ  +G
Sbjct: 60  NGGYPVVA-----FGSVGVYVLILQDALRAIGF--TTTDIDGYFGPITQRTVINFQNSYG 112

Query: 151 LDPSGMVDSSTLEAMNVPVD 170
           L   G+V   T E +     
Sbjct: 113 LVADGIVGCLTWETLTSNAA 132


>gi|15225398|ref|NP_182030.1| matrix metalloproteinase [Arabidopsis thaliana]
 gi|26452204|dbj|BAC43190.1| putative metalloproteinase [Arabidopsis thaliana]
 gi|31711730|gb|AAP68221.1| At2g45040 [Arabidopsis thaliana]
 gi|330255405|gb|AEC10499.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 342

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            VS+  ++  L   G L  +K      D   E A+  +Q   GL  +G  DS TL  + +
Sbjct: 47  DVSIPEIKRHLQQYGYLPQNKESD---DVSFEQALVRYQKNLGLPITGKPDSDTLSQILL 103

Query: 168 P 168
           P
Sbjct: 104 P 104


>gi|307946200|ref|ZP_07661535.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307769864|gb|EFO29090.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 301

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 3/65 (4%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMNV 167
             +  L+  L   G    S  +          A++ FQ  H  L   G+   +T   +  
Sbjct: 172 DDIATLQTSLKQVGF--DSGSIDGVLGDRTRDAIRAFQRSHPPLVVDGIAGPATRTRLQR 229

Query: 168 PVDLR 172
            +  R
Sbjct: 230 QLAKR 234


>gi|254429304|ref|ZP_05043011.1| ErfK/YbiS/YcfS/YnhG superfamily [Alcanivorax sp. DG881]
 gi|196195473|gb|EDX90432.1| ErfK/YbiS/YcfS/YnhG superfamily [Alcanivorax sp. DG881]
          Length = 156

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H TP+           + GC+R+RN
Sbjct: 112 IYIHGTPDSESMGTP---ASHGCIRMRN 136


>gi|302833708|ref|XP_002948417.1| hypothetical protein VOLCADRAFT_103883 [Volvox carteri f.
           nagariensis]
 gi|300266104|gb|EFJ50292.1| hypothetical protein VOLCADRAFT_103883 [Volvox carteri f.
           nagariensis]
          Length = 488

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 6/91 (6%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLD 152
           WP      L  G+    V  ++  L  SG       +    F     +A+K FQ    + 
Sbjct: 370 WP-----VLMDGDGGREVHAMQVALANSGFYCGEDDMRWWQFGDATLTALKYFQSCSSIP 424

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRI 183
            SG+ D  T  A+            V L ++
Sbjct: 425 ESGVCDERTWRALLGREASPADLYLVRLNKV 455



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 95  PELPIRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSV-AFDAYVESAVKLFQMRHGLD 152
           P  P   L  G+     + RL   L   G       +    F     +AV  FQ    L 
Sbjct: 234 PTDPPPELVQGDDDIYWLSRLHTCLEQRGFFPGDDDMENWFFGEGTLAAVLSFQASERLP 293

Query: 153 PSGMVDSSTLEAM 165
            +G+VD  T  A+
Sbjct: 294 ETGVVDRPTWTAL 306


>gi|291446759|ref|ZP_06586149.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
 gi|291349706|gb|EFE76610.1| peptidoglycan-binding domain 1 protein [Streptomyces roseosporus
           NRRL 15998]
          Length = 417

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
             +P  R +  G+    V +L   L   G       +   +    E+AVK +Q     + 
Sbjct: 167 GPVPAFREMKTGHRGSDVLQLERNLRDLGY-GAGLHVDTEYGEDTEAAVKRWQKHLNRET 225

Query: 154 SGMVDSS 160
           +G V   
Sbjct: 226 TGRVGRG 232


>gi|253573319|ref|ZP_04850662.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846847|gb|EES74852.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 486

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/311 (13%), Positives = 81/311 (26%), Gaps = 109/311 (35%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
             A +       IP   +E++     A+  Y+   + G WP                  L
Sbjct: 241 DSAALQERARHWIPQ--QESLGVLASAMIHYKQ--ANGVWP----------------ASL 280

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVK--LFQ-MRHGLDPSGMVDSSTLEAMNVPVDL 171
           ++   + G    +       D  +  A K  L Q  R G   +G  ++  + A  +    
Sbjct: 281 QD---LVGPYPDNWIAGT--DPTMVRAFKPLLAQLKREGTGATGNANAPEVLAEGMAPGQ 335

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
           R                       ++V+    +L  V    +     V +G    +TP  
Sbjct: 336 R---------------PFFAEPYEMIVDTKTHTLAVVSGNVLIRSYPVGLG--GSRTPEG 378

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
              I+  + NP                  +D        + + D                
Sbjct: 379 TFVISEKVINPNG----------------RDSGEFGSRGMQLSDTN-------------- 408

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
                                          +H T EP          + GC+R+  +++
Sbjct: 409 -----------------------------YAIHGTNEPDSIGKDE---SLGCIRMGKKDV 436

Query: 350 IDLDVWLLKDT 360
            +L   + K T
Sbjct: 437 EELFDLVPKGT 447


>gi|209524890|ref|ZP_03273436.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209494769|gb|EDZ95078.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 606

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +++ RLI  G L+P   +   F     +A + FQ    +  SG++ S T + +     +R
Sbjct: 114 QIQTRLIDLGLLEP--PVDGIFGPLSTAAFRRFQELMNISESGILGSETAKKLIETTTIR 171

Query: 173 IRQLQVN 179
              +++ 
Sbjct: 172 RENMRLQ 178



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-----V 167
           +++ RLI  G LDP       F     +A K FQ    +  SG++ + T + +       
Sbjct: 27  QIQTRLIDLGLLDPPA--DGIFGPLSTAAFKRFQELMNISESGILATETAQKLLDTTTMR 84

Query: 168 PVDLRIRQLQVNLMRI 183
           P ++R+       +R 
Sbjct: 85  PPNMRLEDFLGTNIRY 100


>gi|78485644|ref|YP_391569.1| ErfK/YbiS/YcfS/YnhG [Thiomicrospira crunogena XCL-2]
 gi|78363930|gb|ABB41895.1| ErfK/YbiS/YcfS/YnhG familiy protein [Thiomicrospira crunogena
           XCL-2]
          Length = 162

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 5/43 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
            Y+H TP+           + GC+R+RN  ++ L   +   T 
Sbjct: 118 IYIHGTPDTEPMGVPK---SHGCIRMRNQDVMALFDLIPVGTE 157


>gi|319791584|ref|YP_004153224.1| peptidoglycan-binding domain 1 protein [Variovorax paradoxus EPS]
 gi|315594047|gb|ADU35113.1| Peptidoglycan-binding domain 1 protein [Variovorax paradoxus EPS]
          Length = 238

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L  G+    V+RL+E L  +    P   +   +  +   AV+  Q  + L   G   
Sbjct: 3   TLRQGSRGADVRRLQEALNRTLRPGPGLVIDGDYGPFTRMAVRRLQAANWLVEDGEAG 60


>gi|308050969|ref|YP_003914535.1| peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
 gi|307633159|gb|ADN77461.1| Peptidoglycan-binding domain 1 protein [Ferrimonas balearica DSM
           9799]
          Length = 512

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              +   ++S  VQ L  RL           L   FD  +E+ ++ FQ + GLD  G+  
Sbjct: 433 PGLIGPDSASAQVQWLENRLAQVQ--QRPARLLSGFDRQLEADLRGFQRQQGLDIDGLAG 490

Query: 159 SSTLEAMN 166
             TLE ++
Sbjct: 491 RQTLERLS 498


>gi|254465328|ref|ZP_05078739.1| lytic murein transglycosylase [Rhodobacterales bacterium Y4I]
 gi|206686236|gb|EDZ46718.1| lytic murein transglycosylase [Rhodobacterales bacterium Y4I]
          Length = 443

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP    R L     S   + L++RL  +G    ++G+          AV+ +Q+ +G
Sbjct: 375 RGDWPR-SDRALT---RSER-EELQQRLTAAGF--DTEGVDGRIGPKTIGAVRAYQVANG 427

Query: 151 LDPSGMVDSSTLEAMN 166
           L   G      L+ + 
Sbjct: 428 LTADGYASPRLLQRLR 443


>gi|255083362|ref|XP_002504667.1| predicted protein [Micromonas sp. RCC299]
 gi|226519935|gb|ACO65925.1| predicted protein [Micromonas sp. RCC299]
          Length = 497

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 7/101 (6%)

Query: 67  IPIISKETIAQTEKAIAFYQDILSRG-GWPELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
            P+   E     +K    +  I + G  WP      L L +  + V +L   L  +G   
Sbjct: 354 APVWGDEQNRPIDKVSEEFTQIATSGEKWP-----VLRLEDGGMEVHKLHVLLDSAGYYS 408

Query: 126 PSKGLSV-AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             + +   +F    E+A+  FQ  +GL  +G+    T +A+
Sbjct: 409 GEEDMEWWSFGGSTENALGTFQASNGLPDTGLTCLLTWKAL 449



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 114 LRERLIISGDLDPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++  L  +G     +  +  +     + A+  FQ   GL   G VD  T  A+
Sbjct: 232 IQSSLNEAGFWAGEEDEADMYFGPSTQEAMCYFQASVGLPEVGYVDPDTWRAL 284


>gi|170745521|ref|YP_001766978.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170659122|gb|ACB28176.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 386

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 51/146 (34%), Gaps = 7/146 (4%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLG 105
            + +  F           ++  P  S+ T +  ++ +   +  + R   P     PL   
Sbjct: 207 GLTDSIFSAGHGTGPQAANAARPQPSQATGSGGDRQVDNQRIAVERTDSP---GEPLS-- 261

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++  V+++++ L   G    +  L   ++     A   FQ   GL+P+G + ++ L  +
Sbjct: 262 MNADGVRQIQQVLNQRGY--AAGHLDGNWNNDTTIAATHFQQAQGLEPTGTLTTNLLATV 319

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKM 191
            +    R   +     R         
Sbjct: 320 GMSRWERGEFMGGMTARANTPGNPNP 345



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           SS  V+++++ L   G    +  +   ++    +A + FQ    ++P+G + 
Sbjct: 48  SSAGVRQIQQALTQKGY--STGNVDGRWNPQTAAAARSFQQAQNMEPTGSLT 97



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++++++ L   G    +  +   +      A + +Q  H L+P+G ++   + A+ + 
Sbjct: 152 AGIRQIQQALNQQGW--NTGQVDGRWGPATVQAARSYQQAHALEPTGRLEVGLVAALGLT 209


>gi|222056276|ref|YP_002538638.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
 gi|221565565|gb|ACM21537.1| Peptidoglycan-binding domain 1 protein [Geobacter sp. FRC-32]
          Length = 264

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 10/78 (12%)

Query: 98  PIRPLHLGNSSVS-VQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHG--- 150
           P R + +G      V+ L+ RL  + G             +   ++  VKLFQ R+    
Sbjct: 4   PGRIIKVGEQDAVIVKALKLRLNKVLGSDPALRLDPDDPNYGPKMKQMVKLFQARNVDAA 63

Query: 151 ---LDPSGMVDSSTLEAM 165
              L   G V S T  ++
Sbjct: 64  GRPLKQDGEVGSLTWASL 81


>gi|325964353|ref|YP_004242259.1| peptidoglycan binding protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470440|gb|ADX74125.1| putative peptidoglycan binding protein [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 734

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDL-DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            G       +++  L   G L   +       D   E A++ FQ    L  +G+ D +T 
Sbjct: 20  PGERKPGFNKVQSYLERFGYLGATTAREIGVLDDPTEGALRSFQEFFHLPVTGVFDDATR 79

Query: 163 EAMNVP 168
           EAM  P
Sbjct: 80  EAMMQP 85


>gi|154484779|ref|ZP_02027227.1| hypothetical protein EUBVEN_02497 [Eubacterium ventriosum ATCC
           27560]
 gi|149734627|gb|EDM50544.1| hypothetical protein EUBVEN_02497 [Eubacterium ventriosum ATCC
           27560]
          Length = 421

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G S   V +++E+L  I       P       F    +++V+ FQ    L  +
Sbjct: 334 PGYDLTIGASGQKVMQMQEQLDTIARVYTAIPRVSADGVFGEGTQASVRAFQKIFDLPQT 393

Query: 155 GMVDSSTLEAMNV 167
           G VD ST   ++ 
Sbjct: 394 GEVDFSTWYKISQ 406


>gi|146329639|ref|YP_001209845.1| hypothetical protein DNO_0956 [Dichelobacter nodosus VCS1703A]
 gi|146233109|gb|ABQ14087.1| hypothetical protein DNO_0956 [Dichelobacter nodosus VCS1703A]
          Length = 478

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 32/188 (17%)

Query: 85  YQDILSRGG------WPELPIRPLHLGNSSVSVQRLRERLIISG--DLDPSKG-LSVAFD 135
             D+ + GG      W  +  +    G  S ++     RLI +G   LD   G +   ++
Sbjct: 62  LYDLAAMGGASELQQW-LVKQKVAKEGEYSSALI----RLIQTGLRFLDFDAGVIDGVYN 116

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY 195
              +S +K FQ       +G + +  L   N  +  +++Q   +        +  +G + 
Sbjct: 117 QDTQSGIKAFQKSQKQKTTGKITADWLRIFNRRLTAKVQQRLNHFGYAAGGADGIIGKKT 176

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR--INRIMFNPYWVIPRSIIQK 253
               I                      ++   T        I +IM        + I + 
Sbjct: 177 QEALIALRKQY----------------QLPWLTYSFIDDRLIYQIMLTENENNKKQIEKN 220

Query: 254 DMMALLRQ 261
            ++A  ++
Sbjct: 221 QLIAKKQR 228


>gi|116251063|ref|YP_766901.1| hypothetical protein RL1296 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255711|emb|CAK06792.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 268

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 71/227 (31%), Gaps = 46/227 (20%)

Query: 144 LFQMRHGLDPSG----MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            F   +GL  +      +     +       + + ++Q   +R +   +       V+++
Sbjct: 75  QFHQTYGLPVTNPVHMAMYGQQRDEDFTLPAIPVSRVQPQFLRQEVDYQTTERPGTVVID 134

Query: 200 IPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
                L  VE     +R  V +GR D         I      P W         +M++  
Sbjct: 135 TKTHFLYFVEGNGKAMRYGVGLGR-DGYAWSGRGVIQWKQKWPRWTP-----SVEMVSRQ 188

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YS 317
            +   +  +N                               +PG +N + +  +      
Sbjct: 189 PEVRPFGAENGGM----------------------------NPGLMNPLGARAMYIFKDG 220

Query: 318 RNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           ++  Y +H TP+           +SGCVR+  +++IDL   +     
Sbjct: 221 QDTLYRVHGTPDWQSIGK---ATSSGCVRMLNQDVIDLYDRVPARAE 264


>gi|90418812|ref|ZP_01226723.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90336892|gb|EAS50597.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 234

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 63/198 (31%), Gaps = 45/198 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++     R +           V+V+        V+ G   +R  V VGR     
Sbjct: 67  PAIDLSRVDPIYYRQEVADPTGEKPGTVVVDTANKFAYVVQPGGRAMRYGVGVGREG-FG 125

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               ++I      P W  P     K+M+A   +  QY                       
Sbjct: 126 WSGRAKIQWKKKWPTWTPP-----KEMIARKPELAQYADGM------------------- 161

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                       +PG  N + +  +      ++  Y +H +PE           +SGC+R
Sbjct: 162 ------------EPGIGNPLGARALYLFQNGKDTLYRLHGSPEYWTIGTSG---SSGCIR 206

Query: 346 V--RNIIDLDVWLLKDTP 361
              ++IIDL   +   +P
Sbjct: 207 FMNQDIIDLYDRVPSGSP 224


>gi|258511360|ref|YP_003184794.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478086|gb|ACV58405.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 300

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 41/169 (24%), Gaps = 50/169 (29%)

Query: 104 LGNSSVSVQRLRERLIISGDLD------------------------------------PS 127
           LG+    +  L   L   G L                                       
Sbjct: 61  LGDRGEPIWALHVVLAELGYLPCRYHAVIPTDRLYAQNWEHAPLGYWTWNSPDVPPELER 120

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
                 +    + AV  F+  HGL   G         + + + L +          + ++
Sbjct: 121 AWNPDQYTEITKGAVMRFEADHGLRVDGYTGPRVRRTLEIALALHLT----ATQPYRLVM 176

Query: 188 EQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRI 235
             +        +IP   L   E+G+ V  ++    G     T      I
Sbjct: 177 VDQ--------SIPQ-QLRVWEDGRGVIFQTACSTGVPAAPTQPGVHAI 216


>gi|163744878|ref|ZP_02152238.1| hypothetical protein OIHEL45_04805 [Oceanibulbus indolifex HEL-45]
 gi|161381696|gb|EDQ06105.1| hypothetical protein OIHEL45_04805 [Oceanibulbus indolifex HEL-45]
          Length = 392

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
                 G S  +++ L+ +L   G       +     +   +AV+  Q R G+   G   
Sbjct: 328 AGNPQPGLSGEAMKTLQRKLQSMGY--DVGDVDGILGSGTRAAVRAEQERLGMPVDGWPT 385

Query: 159 SSTLEAM 165
            S L  +
Sbjct: 386 PSLLNQL 392


>gi|56964826|ref|YP_176557.1| carboxyl-terminal processing protease [Bacillus clausii KSM-K16]
 gi|56911069|dbj|BAD65596.1| carboxyl-terminal processing protease [Bacillus clausii KSM-K16]
          Length = 484

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  +   ++ L   G           FD   E A+  FQ  H L  +G ++  T   +
Sbjct: 397 QVSDQIGNAQKMLTGLGF--DVGRDDGYFDEKTEEAIIAFQQSHDLQANGELNEETAGKL 454

Query: 166 NVPVDLRIRQLQVNLMRIK 184
              +   IR    +    +
Sbjct: 455 QEDILSHIRDTANDEQLKR 473


>gi|15895879|ref|NP_349228.1| cell wall hydrolase [Clostridium acetobutylicum ATCC 824]
 gi|15025646|gb|AAK80568.1|AE007759_6 Cell wall hydrolase (autolysin), family 25 of glycosyl hydrolases;
           peptodoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325510031|gb|ADZ21667.1| Cell wall hydrolase (autolysin), family 25 of glycosyl hydrolase
           [Clostridium acetobutylicum EA 2018]
          Length = 325

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S +V+ ++++L     L     +     A   +A+K FQ   GL   G+    T+ A+ 
Sbjct: 199 SDTVKIIQQQLNTL--LKKGLIVDGISGASTTAAIKEFQGAMGLAQDGIWGPKTVAAVT 255



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                 L   +    E+ VK++Q  HGL+  G+V + T   +
Sbjct: 279 YRVGGKLDGVYGPQTEANVKVWQSNHGLNADGIVGNDTWNKL 320


>gi|93006686|ref|YP_581123.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
 gi|92394364|gb|ABE75639.1| ErfK/YbiS/YcfS/YnhG [Psychrobacter cryohalolentis K5]
          Length = 171

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
            Y+H TP+    +      + GC+R+RN  II+L   + + T
Sbjct: 126 IYIHGTPDSEPMSVP---LSHGCIRMRNQDIIELFEQIEEGT 164


>gi|149914813|ref|ZP_01903343.1| lytic murein transglycosylase [Roseobacter sp. AzwK-3b]
 gi|149811606|gb|EDM71441.1| lytic murein transglycosylase [Roseobacter sp. AzwK-3b]
          Length = 432

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 9/86 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + +    GW  L +            + ++  L   G    +      +      A++ F
Sbjct: 356 EAVAGACGWSTLDLSR-------DDYRAIQTMLNAGGF--DAGTPDGVWGNGSRKAMRAF 406

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q ++GL  +G  D  TLEA+ V    
Sbjct: 407 QEQNGLPATGAPDRVTLEALGVSPSD 432


>gi|254393774|ref|ZP_05008891.1| hypothetical protein SSCG_06177 [Streptomyces clavuligerus ATCC
           27064]
 gi|294814614|ref|ZP_06773257.1| Transcriptional regulator, XRE family [Streptomyces clavuligerus
           ATCC 27064]
 gi|326443000|ref|ZP_08217734.1| transcriptional regulator, XRE family protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197707378|gb|EDY53190.1| hypothetical protein SSCG_06177 [Streptomyces clavuligerus ATCC
           27064]
 gi|294327213|gb|EFG08856.1| Transcriptional regulator, XRE family [Streptomyces clavuligerus
           ATCC 27064]
          Length = 221

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+     + +  G     V+ ++  L   G       +   F    + AV   Q R  + 
Sbjct: 150 GYSSTSTQIVREGARGNVVREIQCLLDYWGIFPH--AIDGVFGPLTKDAVVEAQRRCQIA 207

Query: 153 PSGMVDSSTL 162
             G+V  +T 
Sbjct: 208 QDGIVGPNTW 217


>gi|226947822|ref|YP_002802913.1| YbfG [Clostridium botulinum A2 str. Kyoto]
 gi|226840753|gb|ACO83419.1| YbfG [Clostridium botulinum A2 str. Kyoto]
          Length = 695

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   +     G W        P   G++S    V  L+  L ++G  
Sbjct: 167 VYSRDTNRALIKALQVEEGTTPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-- 224

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
               G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 225 IDPNGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|168177934|ref|ZP_02612598.1| putative peptidoglycan binding domain protein [Clostridium
           botulinum NCTC 2916]
 gi|182670965|gb|EDT82939.1| putative peptidoglycan binding domain protein [Clostridium
           botulinum NCTC 2916]
          Length = 695

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 6/107 (5%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR--PLHLGNSSVS--VQRLRERLIISGDL 124
           + S++T     KA+   +     G W        P   G++S    V  L+  L ++G  
Sbjct: 167 VYSRDTNRALIKALQVEEGTTPDGIWGPGTQDKCPTIPGSNSNQRYVLLLQYSLYVNG-- 224

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
               G    F   + +A+K FQ    L   G        ++ V    
Sbjct: 225 IDPNGFDGLFGNGLSNAIKEFQSFCALPADGYAGKQVWASLLVSTGD 271


>gi|146306620|ref|YP_001187085.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
 gi|145574821|gb|ABP84353.1| ErfK/YbiS/YcfS/YnhG family protein [Pseudomonas mendocina ymp]
          Length = 174

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            Y+H TP+           + GCVR+RN   L
Sbjct: 118 IYLHGTPDCEPMGVP---LSHGCVRLRNADML 146


>gi|319782167|ref|YP_004141643.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168055|gb|ADV11593.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 196

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 40/138 (28%), Gaps = 22/138 (15%)

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKD-----MMALLRQDPQYLKDNNIHMIDEKGKEV 281
             P L   +          I   II+KD     ++    Q  +Y            G   
Sbjct: 46  MGPSLRKAVTFRTAEQPGTI---IIRKDEKALYLVTRQGQALRYQISVGRDGFGWTGIVK 102

Query: 282 FVEEVDWNSPEPPN--------FIFRQDPGKINAMASTKIEFY--SRNNTY-MHDTPEPI 330
              + +W    PP                G  N + +  +      R+  Y +H T +P 
Sbjct: 103 VGAKTEWPEWRPPQEMRARQPELPKMVPAGPYNPLGARALYLSRDGRDTLYRIHGTNDPS 162

Query: 331 LFNNVVRFETSGCVRVRN 348
                    TSGC R+ N
Sbjct: 163 GVGFDG---TSGCFRLTN 177


>gi|296221444|ref|XP_002756745.1| PREDICTED: matrix metalloproteinase-21 [Callithrix jacchus]
          Length = 571

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 35/146 (23%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA---I 82
           L       ++L   +     +     F +             P+   + IA    A   +
Sbjct: 2   LTASIFRPTLLLCWLAAPGPTQPESLFHSRDHSDLEP----SPLRQAQPIADLHAAQRFL 57

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           + Y    ++  W   P  P           +                        +  AV
Sbjct: 58  SRYGWSGAQAAWGPSPEGP-------PETPK---------------------GTSLAQAV 89

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
           + FQ  + L  SG +D++TL AMN P
Sbjct: 90  RRFQRANALPASGELDAATLAAMNQP 115


>gi|85706918|ref|ZP_01038008.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
 gi|85668529|gb|EAQ23400.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
          Length = 179

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 6/84 (7%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MH 324
           L       +  K +              P +     PG  N + +  +        Y +H
Sbjct: 82  LTRRGRTAVVRKVEGPSWRPTPSMLQRNPEWPAFVPPGPDNPLGTHALYLS--WTYYRIH 139

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GCV + N
Sbjct: 140 GTHDTRKIG---RRSSNGCVGLYN 160


>gi|298291921|ref|YP_003693860.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296928432|gb|ADH89241.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 1052

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 30/92 (32%), Gaps = 8/92 (8%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           +V +++  L+  G       +   +     +A+  FQ   GL  +G +   T+E +    
Sbjct: 31  NVSQIQRALVDHGY--NIGAVDGLWGRRSINALAAFQKSEGLPATGELSDETVEKLLQSP 88

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             R+      +   + +              P
Sbjct: 89  QPRV------MAPARAITPALPAGPTPSPQAP 114


>gi|89056490|ref|YP_511941.1| peptidoglycan binding domain-containing protein [Jannaschia sp.
           CCS1]
 gi|88866039|gb|ABD56916.1| Peptidoglycan-binding domain 1 [Jannaschia sp. CCS1]
          Length = 568

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           +RL + G       +   FD     AV+ +Q   G+D +G +D  T+
Sbjct: 505 QRLTVLGL--DPGRVDGRFDDSTRRAVRRYQQARGMDVTGYLDQQTV 549


>gi|228918376|ref|ZP_04081835.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228841271|gb|EEM86454.1| Peptidoglycan-binding domain 1 protein [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 414

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKL 144
           +G   + P + L  G S   V+ ++   ++  ++       P   ++  F      AVK 
Sbjct: 326 QGRPTQPPEKILKEGTSGSDVREIQ---VLLNEISKKYNKIPKIQVNGKFGDTTTKAVKA 382

Query: 145 FQMRHGLDPSGMVDSSTLEAMN 166
           FQ    +   G+VD  T   + 
Sbjct: 383 FQEIFTVPQDGIVDFRTWYKIT 404


>gi|218528934|ref|YP_002419750.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium chloromethanicum CM4]
 gi|218521237|gb|ACK81822.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium chloromethanicum CM4]
          Length = 250

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 20/145 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--------- 96
                +    +A     +     I     +A ++ A A  +D      W           
Sbjct: 110 PYPEAQIAAVIALARDIVVRRA-IPGPRVLAHSDVAPARKEDPGEDFPWERLAREGVGHW 168

Query: 97  LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +P  P+       +G++   V+ L+  L + G     + ++  FDA + + V  FQ    
Sbjct: 169 VPTAPVRDGRFFAMGDTGQPVEALQAMLALYGY---EQPVTGHFDAAMRAVVTAFQRHFR 225

Query: 151 -LDPSGMVDSSTLEAMNVPVDLRIR 174
                G+ DSST+  +   +  R  
Sbjct: 226 PARIDGVADSSTITTLRDLIASRPA 250


>gi|62317131|ref|YP_222984.1| hypothetical protein BruAb2_0179 [Brucella abortus bv. 1 str.
           9-941]
 gi|62197324|gb|AAX75623.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
          Length = 227

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 37/140 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNV 335
                  +H T +P      
Sbjct: 197 G-STLYRIHGTNQPWTIGRP 215


>gi|148257428|ref|YP_001242013.1| 1 N-acetylmuramoyl-L-alanine amidase [Bradyrhizobium sp. BTAi1]
 gi|146409601|gb|ABQ38107.1| putative 1 N-acetylmuramoyl-L-alanine amidase (family 2) with
           peptidoglycan binding domain [Bradyrhizobium sp. BTAi1]
          Length = 283

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 92  GGWPELPI----RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W +         L LG+    V+ L++ L   G       ++  FD      V  FQ 
Sbjct: 192 GHWVQPAAITKGETLKLGSIGDDVRGLQKALAKYGY---GVPITGKFDGITMDVVTAFQR 248

Query: 148 RHGLD-PSGMVDSSTL 162
               +   G+ D STL
Sbjct: 249 HFRPERIDGIADRSTL 264


>gi|300785513|ref|YP_003765804.1| lysozyme [Amycolatopsis mediterranei U32]
 gi|299795027|gb|ADJ45402.1| lysozyme [Amycolatopsis mediterranei U32]
          Length = 428

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 24/69 (34%), Gaps = 4/69 (5%)

Query: 101 PLHLGNSSVSVQRLRERL---IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            L  G+S   V+ L+ RL   +  G   P   +   F     + V  FQ        G+ 
Sbjct: 125 TLQSGSSGTDVKELQCRLNLAMEPGHYPP-LTIDGQFGDGTRTRVIQFQHCANASADGVA 183

Query: 158 DSSTLEAMN 166
             +T   + 
Sbjct: 184 GPTTWAKVA 192



 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            L  G +  +V   +  L ++        +    +F    ++ V++FQ    L   G + 
Sbjct: 27  TLKQGATGAAVAEAQCELNLATKASRYTPIGADGSFGPATDARVRVFQKCAALSVDGQIG 86

Query: 159 SSTLEAMNV-PVDLR 172
            +T  A+N      R
Sbjct: 87  PNTWAALNSWSARPR 101


>gi|260544368|ref|ZP_05820189.1| ybiS [Brucella abortus NCTC 8038]
 gi|260759630|ref|ZP_05871978.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260762873|ref|ZP_05875205.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260097639|gb|EEW81513.1| ybiS [Brucella abortus NCTC 8038]
 gi|260669948|gb|EEX56888.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 4 str.
           292]
 gi|260673294|gb|EEX60115.1| ErfK/YbiS/YcfS/YnhG family protein [Brucella abortus bv. 2 str.
           86/8/59]
          Length = 260

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 37/140 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 146 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 203

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 204 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 229

Query: 316 YSRNNTYMHDTPEPILFNNV 335
                  +H T +P      
Sbjct: 230 G-STLYRIHGTNQPWTIGRP 248


>gi|254698413|ref|ZP_05160241.1| Protein YBIS precursor [Brucella abortus bv. 2 str. 86/8/59]
 gi|254731860|ref|ZP_05190438.1| Protein YBIS precursor [Brucella abortus bv. 4 str. 292]
          Length = 227

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 37/140 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 113 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 170

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 171 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 196

Query: 316 YSRNNTYMHDTPEPILFNNV 335
                  +H T +P      
Sbjct: 197 G-STLYRIHGTNQPWTIGRP 215


>gi|227502232|ref|ZP_03932281.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49725]
 gi|227077056|gb|EEI15019.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49725]
          Length = 382

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 12/70 (17%)

Query: 110 SVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L                     FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFTGELSAWKKQKYSETDKTFDADLAEVLKAFQQSRGILPTGEI 61

Query: 158 DSSTLEAMNV 167
           D  TL  +  
Sbjct: 62  DDLTLRELRQ 71



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGN 106
           F   L+       S+        +A+  KA    + IL  G   +L +R L      LG+
Sbjct: 19  FTGELSAWKKQKYSETDKTFDADLAEVLKAFQQSRGILPTGEIDDLTLRELRQASYTLGS 78

Query: 107 S-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          + +L+++L   G       +   F     +A+  +Q   GL   G
Sbjct: 79  RVLSYEPTNALVGDDISQLQQQLQELGFY--QDRVDGHFGRTTHAALTEYQHNCGLQEDG 136

Query: 156 MVDSSTLEAMN 166
           +   +T+ A++
Sbjct: 137 VCGPATIRALS 147


>gi|83952916|ref|ZP_00961645.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           nubinhibens ISM]
 gi|83835707|gb|EAP75007.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           nubinhibens ISM]
          Length = 192

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 49/222 (22%)

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL-RYVLVNIP-AAS 204
            R  L  +G V   TL +  V   + + +  +    + +++    G   Y +  +P   +
Sbjct: 3   RRKFLLAAGAVG--TLASQPVSAHVVLPKYDLPPEYLPQVVSIPEGSAPYEIHVVPSQFA 60

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   +     +R  V +GR           +      P W     +++++          
Sbjct: 61  LFWTQPDNTAIRYAVGIGRPGLY-EAGEFYVGAKKEWPSWTPTPGMLRRE--PK------ 111

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY 322
                                      +   F      G  N + +  +      R +T+
Sbjct: 112 ---------------------------KYGPFRNGMPGGLSNPLGARALYLFQPGRGDTF 144

Query: 323 M--HDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
           +  H T +P    +     ++GC R+ N  I+ L   +  DT
Sbjct: 145 LRVHGTNDPSTIGS---AVSNGCARLVNDQIVQLYDMVPLDT 183


>gi|91975382|ref|YP_568041.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
 gi|91681838|gb|ABE38140.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 286

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 302 PGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
            G  N +    +      ++  + +H T EP          +SGC+R+  ++++DL  
Sbjct: 221 GGVDNPLGPRALYLYRNGKDTMFRIHGTTEPGTIGE---AVSSGCIRMLNQDVLDLYE 275


>gi|158426173|ref|YP_001527465.1| N-acetylmuramoyl-L-alanine amidase [Azorhizobium caulinodans ORS
           571]
 gi|158333062|dbj|BAF90547.1| N-acetylmuramoyl-L-alanine amidase [Azorhizobium caulinodans ORS
           571]
          Length = 274

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 30/85 (35%), Gaps = 9/85 (10%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
              +  Y     +GG      R L +G+S   +  L+  L + G       ++  +D   
Sbjct: 166 HAGVGHYVHEAPKGG-----GRFLMMGDSGQPIAALQAMLALYGY---GIEVTGLYDEAT 217

Query: 139 ESAVKLFQMRH-GLDPSGMVDSSTL 162
              V  FQ         G+ D ST+
Sbjct: 218 RDVVMAFQRHFRRSQVDGVADGSTI 242


>gi|320163045|gb|EFW39944.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 288

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 60/239 (25%), Gaps = 37/239 (15%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +   +  L+  L    D   S  ++  +D    +AV   Q    L+ +G+VD +T +A  
Sbjct: 41  TGNDIVVLQHFLQRL-DTVTSLNVTGTYDYPTMTAVLKLQATARLNVTGVVDQATADAA- 98

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
                               L+      YV V  P       +       +  I      
Sbjct: 99  --------------------LDMLSRDHYVDVQGPLPDGYLYKVVVPVHSNRSIEMMATL 138

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
                 S    +        P +    +M +     P       +   D    E    E 
Sbjct: 139 YDKRGLSIFTFLTRAEGQNDPNTGAPLNMFSSDGATPT-----GLMSFDLNSPEDDPTEY 193

Query: 287 DWNSPEPPNFIFRQDPGKINAMASTKIEFYS-RNNTYMHDTPEPILFNNVVRFETSGCV 344
                                  +      + RN   MH    P    ++    + GC+
Sbjct: 194 GPYPVNRAVLGLE---------GNAAWLLPNLRNGILMHTGEWPNWNTSMPMPNSHGCI 243


>gi|225570471|ref|ZP_03779496.1| hypothetical protein CLOHYLEM_06572 [Clostridium hylemonae DSM
           15053]
 gi|225160668|gb|EEG73287.1| hypothetical protein CLOHYLEM_06572 [Clostridium hylemonae DSM
           15053]
          Length = 627

 Score = 45.0 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 42/186 (22%), Gaps = 57/186 (30%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIM 239
           R         G  Y  V++    +  ++NG+V L++ ++ G       TP     +    
Sbjct: 488 RAASHDVNDFGNTYAEVDLTNQQMYFIQNGQVVLQTGIVTGNPNKGNGTPQGTYSLAYKA 547

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            +             +    + D  Y  +                               
Sbjct: 548 LDQV-----------LRGKKKPDGTYEYE------------------------------- 565

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDLDVW 355
                    +  K           HD      F         + GCV +       L   
Sbjct: 566 ---------SPVKFWMPFNGGIGFHDATWQPTFGGSRYQTNGSHGCVNMPYDKAAQLYDL 616

Query: 356 LLKDTP 361
           +   TP
Sbjct: 617 ISAGTP 622


>gi|304406255|ref|ZP_07387912.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
 gi|304344839|gb|EFM10676.1| Peptidoglycan-binding domain 1 protein [Paenibacillus
           curdlanolyticus YK9]
          Length = 434

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 6/72 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGDLD-PSKGLSVAFDAYVESAVKLFQMRHGLD-- 152
           P   L  G +  +V  ++  L  I       P    +  FD   E AVK FQ  +     
Sbjct: 350 PGHELKKGMTDPAVGAMKGFLNVIRKSYPAIPQLNATDLFDEQTEKAVKKFQEINKKKLK 409

Query: 153 -PSGMVDSSTLE 163
             +G+V+  T  
Sbjct: 410 VANGIVNEPTWR 421


>gi|284047661|ref|YP_003398000.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
           20731]
 gi|283951882|gb|ADB46685.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
           20731]
          Length = 205

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 45/166 (27%), Gaps = 53/166 (31%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------DRQTPILHSRINRIMFNP 242
                +L+     +L  +++G+   +  V +G+         D +TP     ++ I+   
Sbjct: 65  PHDYALLIKKGEFTLYLLDHGEPVAKWPVALGKNPGQKQVSGDMKTPEGTFPVDEIIDAS 124

Query: 243 YWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP 302
            W                       D    +    G       +  ++       +    
Sbjct: 125 SW------------------SHDFHDGKGVIQHAYG----PWFISLDTRNLSKGKW---- 158

Query: 303 GKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
                           +   +H T +P       R  + GC+R+ N
Sbjct: 159 ----------------DGIGIHGTHDPASIG--TRA-SEGCIRLEN 185


>gi|83955853|ref|ZP_00964395.1| hypothetical protein NAS141_02171 [Sulfitobacter sp. NAS-14.1]
 gi|83839858|gb|EAP79035.1| hypothetical protein NAS141_02171 [Sulfitobacter sp. NAS-14.1]
          Length = 183

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 12/125 (9%)

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEE--VDWNSPEPPNFIFRQD 301
           W +P +   +  + + R+   Y          +K          +  +      F     
Sbjct: 54  WTLPNNRAIRYTVGIGREGL-YESGEFYVARKQKWPRWTPTPAMIARDPDRYLRFAGGVP 112

Query: 302 PGKINAMASTKIEF--YSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVW 355
            G  N + +  +      R +TY  +H T +P       R  ++GC R+ N  II+L   
Sbjct: 113 GGLNNPLGARALYLYQPGRGDTYLRIHGTTDPKTIG---RRVSNGCARLTNNQIIELYEK 169

Query: 356 LLKDT 360
           +  DT
Sbjct: 170 VPLDT 174


>gi|189022393|ref|YP_001932134.1| Protein YBIS precursor [Brucella abortus S19]
 gi|189020967|gb|ACD73688.1| Protein YBIS precursor [Brucella abortus S19]
          Length = 296

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 37/140 (26%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++++  +  L  V+      R  V VG+    +     RI+R    P W  P  +I ++ 
Sbjct: 182 IVIDTASRFLYLVQADGKARRYGVGVGKQG-FSWKGTQRISRKAEWPTWTPPSEMIARE- 239

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                                               +      R D G  N + +  +  
Sbjct: 240 ----------------------------------RKKGRFLPARMDGGINNPLGARALYL 265

Query: 316 YSRNNTYMHDTPEPILFNNV 335
                  +H T +P      
Sbjct: 266 G-STLYRIHGTNQPWTIGRP 284


>gi|161507774|ref|YP_001577738.1| hypothetical protein lhv_1466 [Lactobacillus helveticus DPC 4571]
 gi|160348763|gb|ABX27437.1| hypothetical protein lhv_1466 [Lactobacillus helveticus DPC 4571]
          Length = 265

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR--IRQLQVNLMRIKK 185
             ++    +AVK FQ RHGL  +G V+  T + M         I      L     
Sbjct: 79  NYYNQATYNAVKNFQRRHGLKATGNVNLKTWQKMGFSKKSWYGIDSYVAPLKAKAW 134


>gi|319404611|emb|CBI78217.1| peptidoglycan-binding protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 350

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+ RL   GD      +        + A+K FQ+RHGL+ +G     TL  +  
Sbjct: 296 IELQSRLAKLGDY--EGEIDGKIGIASKKAIKAFQLRHGLEGNGYPSYETLSHIRK 349


>gi|94502083|ref|ZP_01308587.1| general secretion pathway protein A [Oceanobacter sp. RED65]
 gi|94425794|gb|EAT10798.1| general secretion pathway protein A [Oceanobacter sp. RED65]
          Length = 464

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 47/152 (30%), Gaps = 36/152 (23%)

Query: 28  EKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ---------- 77
           +  + AS++DE              D   A   +  +   P    +++            
Sbjct: 327 QGMLPASLIDENDWVKQGGDWQLLVDKPAATALVYTELSWPFAFPKSVVVEPNEYHEAVS 386

Query: 78  -TEKAIAFYQDILS-RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
              +++   Q   S    W       +   NS     ++R                  FD
Sbjct: 387 WVRQSLIQLQGQASLADDW-----EVIRPANS----AQIRR---------------NFFD 422

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +E  V+ FQ  + L   G++ S T+ A++ 
Sbjct: 423 PLLEDQVRQFQSDYALRVDGIIGSQTIMALSR 454


>gi|239926863|ref|ZP_04683816.1| hypothetical protein SghaA1_01447 [Streptomyces ghanaensis ATCC
           14672]
 gi|291435208|ref|ZP_06574598.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338103|gb|EFE65059.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 255

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-- 152
           P + +  L  G ++  V  L++ LI  G      G +  +     +AV  FQ + G    
Sbjct: 178 PTVELENLQYGKTNGDVVDLQKALIEHG-GKIPAGATGYYGDQTRAAVAAFQRKQGWTGP 236

Query: 153 -PSGMVDSSTLEAMN 166
              G+    T + +N
Sbjct: 237 AADGIPGVETCKRLN 251


>gi|291301425|ref|YP_003512703.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570645|gb|ADD43610.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 192

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 27/61 (44%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +++  V   +  L++ G L     +   F    + A  ++Q   G+  +G V+++T    
Sbjct: 68  DNTDLVVLWQSVLVVDGFLATEDPIDGYFGPDTKRATAMWQDHFGVKQTGKVNAATWAEA 127

Query: 166 N 166
           +
Sbjct: 128 S 128


>gi|329935908|ref|ZP_08285710.1| Putative peptidoglycan binding domain 1 [Streptomyces
           griseoaurantiacus M045]
 gi|329304599|gb|EGG48475.1| Putative peptidoglycan binding domain 1 [Streptomyces
           griseoaurantiacus M045]
          Length = 482

 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 45/135 (33%), Gaps = 11/135 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P RPLH G     V++    L   G       +  ++     +AVK +Q   GL  +G V
Sbjct: 205 PPRPLH-GM---DVKQFEANLSALGY--SGFTVDESYTELTAAAVKRWQADLGLPRTGRV 258

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
               +   + PV +     +V        +      R V V +PA   +    G      
Sbjct: 259 GLGDVVYASGPVRIAGTSARVGEAASGNPVSYTSTSRMVTVGVPAGDTDWARRGSE---- 314

Query: 218 TVIVGRVDRQTPILH 232
            V V   D  T    
Sbjct: 315 -VSVELPDGHTVTGT 328


>gi|311741708|ref|ZP_07715530.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303229|gb|EFQ79310.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 382

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 18/131 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGN 106
           F   L+       S+        +++  KA    + I+  G   +L +R L      LG+
Sbjct: 19  FKGELSAWKKQKYSESDKSFDANLSEVLKAFQQSRGIVPTGEIDDLTLRELRQASYTLGS 78

Query: 107 S-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          + +L+++L   G       +   F     +A+K +Q   GL   G
Sbjct: 79  RVLSYEPANELVGDDISQLQQQLQELGFYQQR--VDGHFGTNTHAALKEYQHNCGLQEDG 136

Query: 156 MVDSSTLEAMN 166
           +   +T+ A+ 
Sbjct: 137 VCGPATIRALG 147



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 13/113 (11%)

Query: 110 SVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L                    +FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFKGELSAWKKQKYSESDKSFDANLSEVLKAFQQSRGIVPTGEI 61

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           D  TL  +       +    ++     +L+   +      +       + V+ 
Sbjct: 62  DDLTLRELRQ-ASYTLGSRVLSYEPANELVGDDISQLQQQLQELGFYQQRVDG 113


>gi|225452584|ref|XP_002275582.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296087730|emb|CBI34986.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 7/73 (9%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAY-----VESAVKLFQMRHGLDPSG 155
             G+    + ++R  L   G L    SK  S           +ESA++ FQ  + L P+G
Sbjct: 43  KKGDKVEGIHKVRNYLQRFGYLSSTHSKTESQVDGDDHFDDDLESAIQAFQTYYHLKPTG 102

Query: 156 MVDSSTLEAMNVP 168
           ++D+ T   M+ P
Sbjct: 103 ILDAPTAALMSRP 115


>gi|302563365|ref|NP_001180685.1| matrix metallopeptidase 23A (pseudogene) [Macaca mulatta]
          Length = 569

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 46/143 (32%), Gaps = 29/143 (20%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L       ++L   +   + +     F +             P+   + IA    A    
Sbjct: 2   LAASIFRPTLLLCWLAAPWSTQPESLFHSRDRSDLEP----SPLRQAKPIADLHAA---- 53

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q  LSR GW  L                        G        +    A + +AV+ F
Sbjct: 54  QRFLSRYGWSGLRA--------------------AWGPSSEGPPETPE-GAALAAAVRRF 92

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  + L  SG +D++TL AMN P
Sbjct: 93  QRANALPASGELDAATLAAMNRP 115


>gi|186684874|ref|YP_001868070.1| peptidoglycan binding domain-containing protein [Nostoc punctiforme
           PCC 73102]
 gi|186467326|gb|ACC83127.1| Peptidoglycan-binding domain 1 protein [Nostoc punctiforme PCC
           73102]
          Length = 276

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPS--KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V+ L+ RL   G   P+        +     +AVK FQ   GL  +G+      + +  P
Sbjct: 109 VKGLQNRLKFHGFATPAEIPQDKPFYGPATYTAVKKFQKSQGLTENGIATFEQRQILQQP 168



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 64/217 (29%), Gaps = 39/217 (17%)

Query: 107 SSVSVQRLRERLIISGDLDPSKG--------------LSVAFDAYVESAVKLFQMRH--G 150
           SS  V  +R  LI  G L P                  +   D   E A+K FQ ++   
Sbjct: 33  SSPEV--IRHILIGLGYLAPEIDPKPDLTKFAPWKRNNNSLTDDLTEEAIKKFQKQYSQK 90

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVN-LMRIKKLLEQKM---GLRYVLVNIPAASLE 206
           L  +G  D+ T   M   V     +L+ +      ++ + K       Y  V     S  
Sbjct: 91  LVVNGNADAETRTVMEETVKGLQNRLKFHGFATPAEIPQDKPFYGPATYTAVKKFQKSQG 150

Query: 207 AVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMM----ALLRQD 262
             ENG        I+ + +             + +     P+S ++   +        Q+
Sbjct: 151 LTENGIATFEQRQILQQPN-------------LTDKPPTPPQSQLKLIDLCFQFKKNPQN 197

Query: 263 PQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
           P Y+   N    +     +      W      N    
Sbjct: 198 PSYIAALNNLQQNLPKDVLHKVTNKWRGTNDQNPEIV 234


>gi|187935424|ref|YP_001884333.1| spore cortex-lytic enzyme SleC [Clostridium botulinum B str. Eklund
           17B]
 gi|187723577|gb|ACD24798.1| spore cortex-lytic enzyme SleC [Clostridium botulinum B str. Eklund
           17B]
          Length = 443

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G+    V+ ++ +L  I     L P       F      +VK+FQ    L  +
Sbjct: 330 PDYDLTVGSVGEPVKTIQNQLNRISKNYPLIPKVAEDGVFGQTTAESVKVFQGIFNLPQT 389

Query: 155 GMVDSSTLEAMN 166
           G+VD +T   ++
Sbjct: 390 GVVDYATWYKIS 401


>gi|13475891|ref|NP_107461.1| hypothetical protein mll7072 [Mesorhizobium loti MAFF303099]
 gi|14026650|dbj|BAB53247.1| mll7072 [Mesorhizobium loti MAFF303099]
          Length = 464

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%)

Query: 101 PLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L   +  +  V  L+  L   G  +P             +A+  FQ  +GL+ +G+ D 
Sbjct: 202 SLEPDDEMAKDVVWLQHSLNALG-ANPQLVEDGKSGPLTRTALSRFQQLNGLNDTGLADP 260

Query: 160 STLEAMNVPVDL 171
            T+ A++  +  
Sbjct: 261 LTIAAIDRQLQP 272


>gi|228968274|ref|ZP_04129272.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791447|gb|EEM39051.1| Carboxyl-terminal protease [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 481

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + L   ++ V V+  +E L   G +         F    ESA+K FQ  + ++ +G +D 
Sbjct: 405 KTLSYNSNDVQVKHAQEMLKSLGYVP--GREDGYFSKETESALKAFQNANEMEATGQLDK 462

Query: 160 STLEAMNV 167
            T EA+  
Sbjct: 463 KTAEAIQT 470


>gi|38638452|ref|NP_943827.1| gp49 [Mycobacterium phage PG1]
 gi|109391895|ref|YP_655145.1| gp49 [Mycobacterium phage Orion]
 gi|33334067|gb|AAQ12126.1| gp49 [Mycobacterium phage PG1]
 gi|88910437|gb|ABD58365.1| gp49 [Mycobacterium phage Orion]
 gi|282721531|gb|ADA83978.1| gp49 [Mycobacterium phage Scoot17C]
          Length = 429

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V+R++ RL  +          +   F    E AV+ FQ R  L   G+V  +T  A+ 
Sbjct: 370 DRVRRVQRRLKAA-YRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTAAALK 428


>gi|304394045|ref|ZP_07375968.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
 gi|303293485|gb|EFL87862.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
          Length = 1176

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 109  VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V + +  L   G                  AV+ FQ   G+  +G +D  TL A+N+
Sbjct: 1120 PTVLKAQALLNQRGY--NVGQPDGLAGPNTRKAVRDFQRSAGIPVTGEIDRETLRALNI 1176


>gi|295111271|emb|CBL28021.1| Uncharacterized protein conserved in bacteria [Synergistetes
           bacterium SGP1]
          Length = 263

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 62/237 (26%), Gaps = 71/237 (29%)

Query: 120 ISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           +SG LD     ++  D  +++A             G V       +  P D   +  +  
Sbjct: 70  LSGPLDSPDVPALLADEALDAA---------SSEPGAVLPE----VEEPEDETPQMTEPT 116

Query: 180 LMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------DRQTPIL 231
                    +  G  ++L+N     L       +     V +G+         D +TP  
Sbjct: 117 PTPSALRPPRDAGKYWILINKGQYRLSLYRGRDLVKTYNVAIGKNPGNKRRVGDNRTPEG 176

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
             R+  I     W                        ++    D KG+          + 
Sbjct: 177 QFRVLSIENASGW-----------------------KHDFG--DGKGEI---------AG 202

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +  R D G                   +H T  P          + GC+R+ N
Sbjct: 203 AYGPWFIRLDTGGW-------------KGIGIHGTHAPDSLGT---MASEGCIRMNN 243


>gi|253996097|ref|YP_003048161.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
 gi|253982776|gb|ACT47634.1| ErfK/YbiS/YcfS/YnhG family protein [Methylotenera mobilis JLW8]
          Length = 159

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 8/54 (14%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
            N + +       +   Y+H TP+ +         + GC+R+RN+    L   +
Sbjct: 102 KNRLGNVDTM---QRYIYIHGTPDSVALGTPD---SHGCIRMRNVDIVALFDLV 149


>gi|13471560|ref|NP_103126.1| hypothetical protein mll1570 [Mesorhizobium loti MAFF303099]
 gi|14022302|dbj|BAB48912.1| mll1570 [Mesorhizobium loti MAFF303099]
          Length = 251

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 4/66 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
              L  G     V+ L+  L + G       +S  FD   +  V+ FQ         G+ 
Sbjct: 178 GAALKAGERGADVEALQSMLALYGY---GVEISGIFDHQTQIVVEAFQRHFRPRLIDGLA 234

Query: 158 DSSTLE 163
           D ST+ 
Sbjct: 235 DGSTMR 240


>gi|282865059|ref|ZP_06274112.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
 gi|282559982|gb|EFB65531.1| Peptidoglycan-binding domain 1 protein [Streptomyces sp. ACTE]
          Length = 426

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 9/89 (10%)

Query: 86  QDILSRGGW----PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVE 139
           + I + GG     P  P       G S+  VQRL  +L+  G       G    +     
Sbjct: 336 RTIPAAGGGADEAPAFPGRGSFRPGQSNSDVQRLGTQLVKKGYGRYYAKGPDRRWTEADR 395

Query: 140 SAVKLFQMRH---GLDPSGMVDSSTLEAM 165
             V+ FQ      G    G     T   +
Sbjct: 396 RNVEAFQKAQGWRGSAADGYPGPETWRRL 424


>gi|255927572|gb|ACU41194.1| gp48 [Mycobacterium phage Colbert]
          Length = 433

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V+R++ RL  +          +   F    E AV+ FQ R  L   G+V  +T  A+ 
Sbjct: 374 DRVRRVQRRLKAA-YRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTAAALK 432


>gi|306834789|ref|ZP_07467853.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49726]
 gi|304569317|gb|EFM44818.1| N-acetylmuramoyl-L-alanine amidase [Corynebacterium accolens ATCC
           49726]
          Length = 382

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 23/70 (32%), Gaps = 12/70 (17%)

Query: 110 SVQRLRERLIISGDLD------------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            V   R  L   G L                     FDA +   +K FQ   G+ P+G +
Sbjct: 2   RVAEARATLARLGLLSDFTGELSAWKKQKYSETDKTFDADLADVLKAFQQSRGILPTGEI 61

Query: 158 DSSTLEAMNV 167
           D  TL  +  
Sbjct: 62  DDLTLRELRQ 71



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 18/131 (13%)

Query: 52  FDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LGN 106
           F   L+       S+        +A   KA    + IL  G   +L +R L      LG+
Sbjct: 19  FTGELSAWKKQKYSETDKTFDADLADVLKAFQQSRGILPTGEIDDLTLRELRQASYTLGS 78

Query: 107 S-----------SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                          + +L+++L   G       +   F     +A+  +Q   GL   G
Sbjct: 79  RVLSYEPTNALVGDDISQLQQQLQELGFY--QDRVDGHFGRTTHAALTEYQHNCGLQEDG 136

Query: 156 MVDSSTLEAMN 166
           +   +T+ A++
Sbjct: 137 VCGPATIRALS 147


>gi|307946479|ref|ZP_07661814.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
 gi|307770143|gb|EFO29369.1| peptidoglycan binding domain-containing protein [Roseibium sp.
           TrichSKD4]
          Length = 305

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 3/74 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEA 164
                V+  +E L   G       +        ++AV  +Q  H  L   G++  +TL  
Sbjct: 174 QPDPVVEEAQEALKRFGF--DPGAIDGWMGRRTKAAVLAYQKTHPHLTNDGIIGPATLAQ 231

Query: 165 MNVPVDLRIRQLQV 178
           +          L  
Sbjct: 232 LRRDAVATKETLTQ 245


>gi|299069644|emb|CBJ40917.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum CMR15]
          Length = 427

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +++L++RL   G       +        ++A++ +Q    L   G    S L  +  
Sbjct: 372 DIKQLQQRLADKGY--DPGTIDGLIGDRTQAAIRAYQKDQHLPQDGYASRSLLARLEK 427


>gi|260462077|ref|ZP_05810321.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mesorhizobium opportunistum WSM2075]
 gi|259031937|gb|EEW33204.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Mesorhizobium opportunistum WSM2075]
          Length = 251

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
              L  G     V+ L+  L + G       +S  FD      V+ FQ         G+ 
Sbjct: 178 GATLGPGARGADVEALQSMLALYGY---GVEISGVFDHQTRIVVEAFQRHFRPRLVDGLA 234

Query: 158 DSSTLEAMNV 167
           D ST+  +  
Sbjct: 235 DGSTMRTLQK 244


>gi|309811332|ref|ZP_07705119.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
 gi|308434639|gb|EFP58484.1| peptidoglycan binding domain protein [Dermacoccus sp. Ellin185]
          Length = 54

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 14/36 (38%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               F     +AV  FQ  H L   G+   +T  A+
Sbjct: 12  ADGVFGPQTRAAVVRFQRAHHLGVDGVAGRATFRAL 47


>gi|284047329|ref|YP_003397669.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283951550|gb|ADB54294.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 375

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 19/169 (11%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  S  V  L+++L   G   P  G    +D     A++ ++  +G+         TL+A
Sbjct: 197 GTRSAFVGILQQKLAKLGYAVPRNG---VYDGGTGRAIEAYRKVNGMSR-----LQTLDA 248

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             V  D  +R +    +R           R+V  ++    L  +ENGKV    T   G  
Sbjct: 249 AVV--DKLLRGVGGFKVRY------PQHGRHVEAHLGQQVLALIENGKVYRAYTTSSGAS 300

Query: 225 DRQTPILHSRINRI---MFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
              T + + R       + N   V     I+   +   +  P Y   + 
Sbjct: 301 VTPTVLGNFRFYWKQPGVNNREMVHSSYFIRGYAIHGYKSVPTYPASHG 349


>gi|118590912|ref|ZP_01548312.1| negative regulator of AmpC, AmpD [Stappia aggregata IAM 12614]
 gi|118436434|gb|EAV43075.1| negative regulator of AmpC, AmpD [Stappia aggregata IAM 12614]
          Length = 254

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 10/84 (11%)

Query: 87  DILSRGGWPELPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            + + G    +   PL        G+S   V+ L+  L + G       ++  FD     
Sbjct: 160 RLAAAGIGLYVTPFPLRTGLLMQEGDSGQPVEALQTMLALYGY---ELDITGTFDLKTRQ 216

Query: 141 AVKLFQMRHG-LDPSGMVDSSTLE 163
            V  FQ         G+ D ST+E
Sbjct: 217 VVAAFQRHFRPEKVDGVADQSTIE 240


>gi|126734056|ref|ZP_01749803.1| Peptidoglycan-binding domain 1 [Roseobacter sp. CCS2]
 gi|126716922|gb|EBA13786.1| Peptidoglycan-binding domain 1 [Roseobacter sp. CCS2]
          Length = 489

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +  RL   G       +   FD     A+  +Q    L  +G +D +TL  +   
Sbjct: 432 LIENRLEQLGY--NPGRVDGRFDNNTRRAIARYQRDGSLTATGYLDQATLARLLAD 485


>gi|288958596|ref|YP_003448937.1| lytic murein transglycosylase [Azospirillum sp. B510]
 gi|288910904|dbj|BAI72393.1| lytic murein transglycosylase [Azospirillum sp. B510]
          Length = 425

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP    + L   +    +  L++RL   G             A   +AV+ FQ   G
Sbjct: 354 RGSWPR-EEQAL---SKDERI-DLQQRLAALGM--EPGTADGIVGANTRNAVRRFQASVG 406

Query: 151 LDPSGMVDSSTLEAMNV 167
             P G    + L+ +  
Sbjct: 407 EIPDGFATKALLDRLRQ 423


>gi|206600340|ref|YP_002241360.1| gp50 [Mycobacterium phage Chah]
 gi|206287428|gb|ACI12770.1| gp50 [Mycobacterium phage Chah]
 gi|282721427|gb|ADA83875.1| gp49 [Mycobacterium phage Fang]
          Length = 438

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 109 VSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V+R++ RL  +         +   F    E AV+ FQ R  L   G+V  +T  A+ 
Sbjct: 379 DRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTAAALK 437


>gi|160700680|ref|YP_001552360.1| gp31 [Mycobacterium phage Giles]
 gi|159136630|gb|ABW88426.1| gp31 [Mycobacterium phage Giles]
          Length = 402

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           LH G S  +V +L+  L           +   F  + E+ V+  Q  +GLD  G+V   T
Sbjct: 338 LHRGMSGPNVVKLQTTLRRW---YSKLAVDGDFGPHTEACVRDRQRIYGLDVDGIVGPLT 394


>gi|255928510|gb|ACU42125.1| gp48 [Mycobacterium phage UncleHowie]
          Length = 438

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 109 VSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V+R++ RL  +         +   F    E AV+ FQ R  L   G+V  +T  A+ 
Sbjct: 379 DRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTAAALK 437


>gi|99082738|ref|YP_614892.1| twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
 gi|99039018|gb|ABF65630.1| Twin-arginine translocation pathway signal [Ruegeria sp. TM1040]
          Length = 205

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 4/67 (5%)

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
                       P +     PG  N + S  +    +    +H T +        R  ++
Sbjct: 124 SWAPTPNMRKRNPEWPAYIPPGPDNPLGSHALYLSWQY-YRIHGTHDTRKIG---RKSSN 179

Query: 342 GCVRVRN 348
           GC+ + N
Sbjct: 180 GCIGLYN 186


>gi|291299240|ref|YP_003510518.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568460|gb|ADD41425.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 195

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 106 NSSVSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +S   +  L +  L+  G L     +   F A    A   +Q  + LDP+G VD +T  
Sbjct: 68  SSGTDLVVLWQSVLVADGYLASVADIDGEFGADTAEATAEWQGDNELDPTGEVDQATWA 126


>gi|182701744|ref|ZP_02955106.1| LycA [Clostridium botulinum NCTC 2916]
 gi|182668788|gb|EDT80766.1| LycA [Clostridium botulinum NCTC 2916]
          Length = 54

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 16/45 (35%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           LI  G    S G    F     +A+K  Q    L   G+V   T 
Sbjct: 2   LINIGYPVGSYGADRVFGNGTVTAIKALQRDCNLSVDGVVGKETW 46


>gi|310817256|ref|YP_003965220.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
 gi|308755991|gb|ADO43920.1| ErfK/YbiS/YcfS/YnhG family protein [Ketogulonicigenium vulgare Y25]
          Length = 208

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 49/177 (27%), Gaps = 42/177 (23%)

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSR 234
           Q+          ++  +      +   A  L  +      +R  V +G          +R
Sbjct: 52  QIPERYQARIVPVQAGLQPGSFHIVSAAYHLYFILPENRAIRYGVAIGSEG-LGWHGSAR 110

Query: 235 INRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPP 294
           I R +  P W     +I+        ++P   +                           
Sbjct: 111 IQRKVEWPSWRPTDEMIE--------RNPAAYER-------------------------- 136

Query: 295 NFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
            +      G  N + +  + FY         +H T +P    +     ++GC R+ N
Sbjct: 137 -YRDGMPGGPTNPLGARALYFYQDGRDTAIRVHGTVQPASIGSSS---SNGCFRMYN 189


>gi|325956760|ref|YP_004292172.1| hypothetical protein LAC30SC_05425 [Lactobacillus acidophilus 30SC]
 gi|325333325|gb|ADZ07233.1| hypothetical protein LAC30SC_05425 [Lactobacillus acidophilus 30SC]
          Length = 366

 Score = 44.6 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR------IRQLQVNLMRIKK 185
             ++    +AVK FQ RH L  +G +D  T + ++            I  L+    + + 
Sbjct: 169 NLYNPATYNAVKNFQRRHNLPATGDIDLKTWQKLDFSKASWYGIDNYIAPLRAQAWQGRS 228

Query: 186 -LLEQKMGLRYVLVNIP 201
             +E  +   Y  +  P
Sbjct: 229 AHIEAMIHQAYQYMGKP 245


>gi|254503418|ref|ZP_05115569.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222439489|gb|EEE46168.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 257

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 17/135 (12%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           L+ RL + G                 +A+K FQ+   + P+G+ D++T++A+ +  D R 
Sbjct: 29  LQMRLNVHG---AQITEDGVIGNETTAALKAFQIARHIKPTGIADAATVKALRISSDQRR 85

Query: 174 RQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKV-----GLRSTVIVGRVDRQT 228
           R      +  + +  Q M      +      +   E          LR    +G   +  
Sbjct: 86  R------VPTRDVPTQTMPP---WLLEMNRRMGLHEGRDNRALSAWLRFGSFLGDPAKLP 136

Query: 229 PILHSRINRIMFNPY 243
               +    I+    
Sbjct: 137 WCGDAVETAIVKTLP 151


>gi|119509318|ref|ZP_01628468.1| hypothetical protein N9414_15245 [Nodularia spumigena CCY9414]
 gi|119466160|gb|EAW47047.1| hypothetical protein N9414_15245 [Nodularia spumigena CCY9414]
          Length = 297

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 67/246 (27%), Gaps = 50/246 (20%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQ-RLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            +  R G  E     L    +   +   L+++LI  G LDP       F  +   A+K F
Sbjct: 2   QLAERIGTQE--TISLEKLQNDSKLARELQQKLIDLGLLDPLA--DGKFGRFSTQALKDF 57

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASL 205
           Q+   ++  G +  +T++A+    ++   QL  NL        Q     Y +        
Sbjct: 58  QLLMKIEEEG-LGKATIQALIEVKEVIPLQLSDNLASRIIKYMQSKNKNYFVARGKQRY- 115

Query: 206 EAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQY 265
                                        I  I       +P +    +           
Sbjct: 116 ----------------------------NIIYIEGANADGVPNADKLNEWNDR------- 140

Query: 266 LKDNNIHMIDEKGKEVFVEEVDW-NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                I +     + V     +W  + EP ++          A A      Y       H
Sbjct: 141 --RIVIEIAMGTPQIVG----NWLATTEPGHYYTVNPMNPKGA-ARIAFGQYPAWQVGTH 193

Query: 325 DTPEPI 330
              EP 
Sbjct: 194 GNSEPH 199


>gi|188582496|ref|YP_001925941.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
 gi|179345994|gb|ACB81406.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
          Length = 418

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL---EAMNVPVD 170
           L+ RL   G   P+ G          +A++ FQ   GL P G  D++ L    A + P  
Sbjct: 360 LQTRLAALGH--PAGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRAADKPAA 417

Query: 171 L 171
            
Sbjct: 418 P 418


>gi|221235062|ref|YP_002517498.1| polar development protein podJ [Caulobacter crescentus NA1000]
 gi|29429226|sp|Q9ZG88|PODJ_CAUCR RecName: Full=Localization factor podJL; AltName: Full=Polar
           organelle development protein; Contains: RecName:
           Full=Localization factor podJS
 gi|251764811|sp|B8GXA0|PODJ_CAUCN RecName: Full=Localization factor podJL; AltName: Full=Polar
           organelle development protein; Contains: RecName:
           Full=Localization factor podJS
 gi|24110907|tpg|DAA00313.1| TPA_exp: polar organelle development protein [Caulobacter
           vibrioides]
 gi|220964234|gb|ACL95590.1| polar development protein podJ [Caulobacter crescentus NA1000]
          Length = 974

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +  L   G               +  A+  +Q   GL P+G VD+ TL  ++V   
Sbjct: 921 QRVLSQLGYY--QGPRDGVSSPALRMAIAAYQRDQGLPPTGSVDAETLNRLSVYAR 974


>gi|229496449|ref|ZP_04390165.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229316677|gb|EEN82594.1| ErfK/YbiS/YcfS/YnhG family protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 319

 Score = 44.6 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 61/221 (27%), Gaps = 28/221 (12%)

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENG 211
               +V+  TL           +Q+                   +L    ++  +  + G
Sbjct: 26  PTDTIVEPDTLS--------IEQQVAEWEANDTLYHAFLDADEALLYMEKSSHAKQYKEG 77

Query: 212 KVGLRSTVIVG---RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
            +   +   +    R+          +++            + +K+      ++  +   
Sbjct: 78  ILPRMARENLPYCERLMNNRFDYFIVVDKASMRVLLYNRYGVKEKEYTCACARNYGHKAK 137

Query: 269 NN----IHMIDEKGKEVFVEEVDWNSPEPPNF--IFRQDPGKINAMASTKIEFYSRNNTY 322
                        G+       DW   +   +    R   G        +I+        
Sbjct: 138 KGDCRTPEGFFYAGETFDST--DWLYTDDNGYTSPVRGQYGPR----FIRIKGDKNLPVG 191

Query: 323 MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTP 361
           +H T  P       R  + GCVR+   NI++L  ++  + P
Sbjct: 192 IHGTCAPWALG---RRCSHGCVRIHNDNILELVKYVQPNMP 229


>gi|319406116|emb|CBI79746.1| peptidoglycan-binding protein [Bartonella sp. AR 15-3]
          Length = 418

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             L+ RL   GD      +        + A+K FQ+RHGL+ +G     TL  +  
Sbjct: 364 IELQSRLEKLGDY--QGEIDGKIGTASKKAIKAFQLRHGLEANGYPSYETLSHIRK 417


>gi|157961727|ref|YP_001501761.1| lytic murein transglycosylase [Shewanella pealeana ATCC 700345]
 gi|157846727|gb|ABV87226.1| lytic murein transglycosylase [Shewanella pealeana ATCC 700345]
          Length = 396

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+ +L   G             +     ++ FQ   GL   G  D +T +A+ V
Sbjct: 339 ARVKELQNQLNHLGY--DVGKADGILGSKSVKGLQSFQKSQGLVADGYPDEATFKALKV 395


>gi|255621795|ref|XP_002540228.1| ATP synthase subunits region ORF, putative [Ricinus communis]
 gi|223497860|gb|EEF22155.1| ATP synthase subunits region ORF, putative [Ricinus communis]
          Length = 119

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 302 PGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDL 352
           PG  N + +  +      R+  Y +H TP+           +SGCVR+  +++IDL
Sbjct: 54  PGPTNPLGARALYIYQNGRDTLYRVHGTPDWQSIGK---AASSGCVRMLNQDVIDL 106


>gi|145708088|ref|YP_001165263.1| hypothetical protein RPRSA1_gp14 [Ralstonia phage phiRSA1]
 gi|139003877|dbj|BAF52391.1| phage-related protein [Ralstonia phage phiRSA1]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G    S   +  +DA   +AV+  Q    L   G+    T
Sbjct: 4   LKPGSTGAEVRELQRLLAGRGF---SAADTGEYDAATAAAVRAAQACFDLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           ++A+ V           +L R    L   + 
Sbjct: 61  VQALRVGARQPGHLTAADLQRAAGTLGVPLE 91


>gi|254438235|ref|ZP_05051729.1| lytic murein transglycosylase subfamily, putative [Octadecabacter
           antarcticus 307]
 gi|198253681|gb|EDY77995.1| lytic murein transglycosylase subfamily, putative [Octadecabacter
           antarcticus 307]
          Length = 398

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           L+ RL   G       +     A  E+A++ FQ R  L  +G+  +  L A+ 
Sbjct: 348 LQRRLAARGY--DIGTIDGVVGAKTEAAIRDFQRRQRLAVTGIATADVLVALR 398


>gi|315635691|ref|ZP_07890954.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Arcobacter butzleri JV22]
 gi|315479988|gb|EFU70658.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Arcobacter butzleri JV22]
          Length = 401

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 45/165 (27%)

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NI     +   + K      V  G+   + P    +I+++  +P W        +D +  
Sbjct: 258 NIMKVKAKINNHLKDIQTYIVSTGKDSVKKPFGVGKISQVSLDPVWYP-----TEDTLKS 312

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYS 317
                   +   I +                             G K N M + KI    
Sbjct: 313 -------FEKRGIIL-----------------------PKVVPSGHKYNYMGAAKINLTH 342

Query: 318 ----RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
               ++   +H T             ++GC+R+RN  ++ L   +
Sbjct: 343 IVDGKSTYRIHGTLNEKTIGTKE---SAGCIRMRNGDVLQLANLI 384


>gi|255928268|gb|ACU41885.1| gp48 [Mycobacterium phage Puhltonio]
          Length = 438

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 109 VSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V+R++ RL  +         +   F    E AV+ FQ R  L   G+V  +T  A+ 
Sbjct: 379 DRVRRVQRRLKAAYRSYAGHLEIDGDFGPLTELAVREFQRRSLLIADGIVGPNTAAALK 437


>gi|157736531|ref|YP_001489214.1| putative periplasmic protein [Arcobacter butzleri RM4018]
 gi|157698385|gb|ABV66545.1| hypothetical periplasmic protein [Arcobacter butzleri RM4018]
          Length = 401

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 45/165 (27%)

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
           NI     +   + K      V  G+   + P    +I+++  +P W        +D +  
Sbjct: 258 NIMKVKAKINNHLKDIQTYIVSTGKDSVKKPFGVGKISQVSLDPVWYP-----TEDTLKS 312

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYS 317
                   +   I +                             G K N M + KI    
Sbjct: 313 -------FEKRGIIL-----------------------PKVVPSGHKYNYMGAAKINLTH 342

Query: 318 ----RNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
               ++   +H T             ++GC+R+RN  ++ L   +
Sbjct: 343 IVDGKSTYRIHGTLNEKTIGTKE---SAGCIRMRNGDVLQLANLI 384


>gi|159039235|ref|YP_001538488.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|159039286|ref|YP_001538539.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157918070|gb|ABV99497.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
 gi|157918121|gb|ABV99548.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
          Length = 272

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                G    +    ++ +K FQ   GL   G++   T +A     
Sbjct: 225 YLRKAGADGLYGPEYQALIKAFQADQGLTRDGLLGRKTWDAAFRNP 270


>gi|49475910|ref|YP_033951.1| hypothetical protein BH11870 [Bartonella henselae str. Houston-1]
 gi|49238718|emb|CAF27970.1| hypothetical protein BH11870 [Bartonella henselae str. Houston-1]
          Length = 249

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 11/94 (11%)

Query: 301 DPGKINAMASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVW 355
            PG  N + +  +  F +  +T   +H + E     +     +SGC+R+  ++IIDL   
Sbjct: 151 PPGPDNPLGARALYLFKNGQDTLFRIHGSHESWSIGH---AISSGCIRLLNQDIIDLYDR 207

Query: 356 LLKDT---PTWSRYHIEEVVKTRKTTPVKLATEV 386
           +   +      +      ++  +  T   L + +
Sbjct: 208 VPIGSRVVVLQNSESRPSILNQQSKTYDPLQSTI 241


>gi|84685434|ref|ZP_01013332.1| hypothetical protein 1099457000258_RB2654_11213 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666591|gb|EAQ13063.1| hypothetical protein RB2654_11213 [Rhodobacterales bacterium
           HTCC2654]
          Length = 236

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 302 PGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR--VRNIIDLDVWL 356
            G  N + S        +R+    +H +P P       R  +SGCVR  + +I DL   +
Sbjct: 162 GGPRNPLGSRAFYLYEGNRDTLLRIHGSPSPGSIG--GRA-SSGCVRMVMAHINDLYPQV 218

Query: 357 LKDTPT--WSRYHIEEV 371
            K           I   
Sbjct: 219 YKGATAHLHPPERITAA 235


>gi|290955222|ref|YP_003486404.1| glycosyl transferase [Streptomyces scabiei 87.22]
 gi|260644748|emb|CBG67833.1| putative glycosyl transferase [Streptomyces scabiei 87.22]
          Length = 448

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                + A  E+ V+ FQ   GL   G++  +T  A+N
Sbjct: 77  AADGTYGAATEARVRDFQRCAGLGVDGVLGPNTWSALN 114



 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 32/108 (29%), Gaps = 11/108 (10%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIR---------PLHLGNSSVSVQRLRERL- 118
           ++   T +         +    RG                  L  G   V V+ ++ RL 
Sbjct: 104 VLGPNTWSALNSWAEQPRTCADRGASGTAQTAVCGHTDTRPTLRKGAKGVEVEEVQCRLN 163

Query: 119 -IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +     P   +   F    ES +  FQ    L   G+V  +T   +
Sbjct: 164 LAMEPFHYPPLSIDGDFGGGTESRIVEFQHCANLGADGVVGPNTWAKL 211


>gi|291521337|emb|CBK79630.1| FOG: Glucan-binding domain (YG repeat) [Coprococcus catus GD/7]
          Length = 645

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +   V +AVK FQ RHGL+ +G+ D +T +A+      
Sbjct: 451 YTRRVFNAVKSFQSRHGLEATGITDLATWKALGYSEAD 488


>gi|119511492|ref|ZP_01630602.1| OpcA [Nodularia spumigena CCY9414]
 gi|119463880|gb|EAW44807.1| OpcA [Nodularia spumigena CCY9414]
          Length = 453

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L   G       +       + +A++  Q+++GL  +G     TL  +      R
Sbjct: 65  LAALGFY--EGPIDGILGPQMAAALRQVQVKYGLPETGTATPETLALLREEFAKR 117


>gi|317508155|ref|ZP_07965838.1| hypothetical protein HMPREF9336_02210 [Segniliparus rugosus ATCC
           BAA-974]
 gi|316253566|gb|EFV12953.1| hypothetical protein HMPREF9336_02210 [Segniliparus rugosus ATCC
           BAA-974]
          Length = 313

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ S  V  ++  L            S  +D  +++ V   Q+  GL  +G++D +T  A
Sbjct: 2   GDLSPKVADIKAYLRREFPHASGLNYSELYDERLKAVVANIQILLGLPATGVMDYATQRA 61

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE 209
                    R+  +  +      +       +  +   A L+  +
Sbjct: 62  CGYSKPAPPRKPTLFTVHGTGQPDPLGPG--IPADTARAVLDLYD 104


>gi|307194255|gb|EFN76651.1| Matrix metalloproteinase-14 [Harpegnathos saltator]
          Length = 547

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 13/85 (15%)

Query: 114 LRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP--- 168
           L+  L   G L PS   + AF     + +A++ FQ   GL+ +G ++  T   M  P   
Sbjct: 2   LQNYLSQYGYLQPSNPENGAFLSSDKLTAAIEEFQAFAGLNITGELNEETARLMATPRCG 61

Query: 169 --------VDLRIRQLQVNLMRIKK 185
                    D R ++  +   R + 
Sbjct: 62  VKDKVGPAADGRSKRYALQGSRWRT 86


>gi|296131513|ref|YP_003638763.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
 gi|296023328|gb|ADG76564.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
          Length = 165

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 24/68 (35%), Gaps = 10/68 (14%)

Query: 102 LHLGNSSVSVQRL--------RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           L  G+    V+ L        R  L  +G       +   F A   +AVK  Q   G+  
Sbjct: 78  LQYGSRGPGVKALQAAINECHRATLNAAGL--ALLSVDGDFGAKTRTAVKAVQRSLGITV 135

Query: 154 SGMVDSST 161
            G+   +T
Sbjct: 136 DGVYGPTT 143


>gi|120555335|ref|YP_959686.1| peptidoglycan binding domain-containing protein [Marinobacter
           aquaeolei VT8]
 gi|120325184|gb|ABM19499.1| Peptidoglycan-binding domain 1 protein [Marinobacter aquaeolei VT8]
          Length = 136

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L     +  V  L+  L  +G       +S + D    + +  FQ  +GL+ +G+++  T
Sbjct: 23  LAPVAQANEVVALKHALYGAGY--DITNVSPSMDDKTRAELTRFQKDNGLEATGILNEET 80

Query: 162 LEAMN 166
             A+ 
Sbjct: 81  ERALG 85


>gi|119387466|ref|YP_918500.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119378041|gb|ABL72804.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 573

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 7/123 (5%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
             ++ RL   G    + G    F +   SA++ +Q R+G   +G + S+ + A+    + 
Sbjct: 397 VAVQRRLNALGY--STGGADGIFGSRTRSAIRGWQQRNGYAVTGYLTSAQVGALRTQAEA 454

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPIL 231
                +    R         G    L     A L+   +G     +   +  ++   P  
Sbjct: 455 VAPS-RDQQDRAYWQQTGAKGGARNLR----AYLDRYPDGIHAQTARQRLAALNGDAPRG 509

Query: 232 HSR 234
              
Sbjct: 510 DRE 512


>gi|322703990|gb|EFY95590.1| carbohydrate-binding protein [Metarhizium anisopliae ARSEF 23]
          Length = 619

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 16/50 (32%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L   G L+     +        +A+K +Q  H L   G     T   M  
Sbjct: 46  LSAYGYLESQDADTGKVGENTIAALKDYQKFHKLKVDGKFGEKTRHLMAQ 95


>gi|292493016|ref|YP_003528455.1| hypothetical protein Nhal_3011 [Nitrosococcus halophilus Nc4]
 gi|291581611|gb|ADE16068.1| protein of unknown function DUF323 [Nitrosococcus halophilus Nc4]
          Length = 799

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++S  V +++  L I G      G+   F    E A++ +Q   GL+P+G +  +T E +
Sbjct: 439 STSQRV-QVQRALDILGHDPQ--GVDGIFGPKTEDAIRSWQRAEGLEPTGDLTQATYEQL 495

Query: 166 NVPV-DLRIRQLQVNLMRIKKLLEQKMG 192
                  R  +   +    K    Q + 
Sbjct: 496 MAAARQQREEKAPRSSAEPKLPPMQNIH 523


>gi|237653173|ref|YP_002889487.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
 gi|237624420|gb|ACR01110.1| ErfK/YbiS/YcfS/YnhG family protein [Thauera sp. MZ1T]
          Length = 159

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTWSRY 366
            Y+H T +           + GCVR+RN  II+L   +   T      
Sbjct: 115 IYLHGTGDDQPMGV---ARSHGCVRMRNHDIIELFELVPAGTVVEIVE 159


>gi|92113032|ref|YP_572960.1| lytic murein transglycosylase [Chromohalobacter salexigens DSM
           3043]
 gi|91796122|gb|ABE58261.1| Lytic murein transglycosylase [Chromohalobacter salexigens DSM
           3043]
          Length = 430

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 34/111 (30%), Gaps = 8/111 (7%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
                  +  +        +    + IA    I  +G WP   + PL    S   ++ ++
Sbjct: 323 GPNFRAIMRYNASTSYALAVVTLAERIAGGDGI--QGSWPR-EVEPL----SRTQIKEMQ 375

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            RL   G                   ++ +Q   G  P G    + LEA+ 
Sbjct: 376 RRLNALGF-STGGSPDGIVGPNTRKGLRAYQRSQGAIPDGFPTPALLEALR 425


>gi|317498218|ref|ZP_07956517.1| phage lysozyme [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894427|gb|EFV16610.1| phage lysozyme [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 246

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 3/69 (4%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGM 156
             +  G+    V+ ++  L   G             +       A++ FQ ++ L    +
Sbjct: 175 STVKKGSVGNDVELMQRLLRSRGYKGKDGETLEIDKSCGENTLHALEAFQKKNKLTADKI 234

Query: 157 VDSSTLEAM 165
              ST + +
Sbjct: 235 CGKSTWKKL 243


>gi|319935309|ref|ZP_08009747.1| hypothetical protein HMPREF9488_00578 [Coprobacillus sp. 29_1]
 gi|319809717|gb|EFW06118.1| hypothetical protein HMPREF9488_00578 [Coprobacillus sp. 29_1]
          Length = 489

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             P        ++Q ++E L   G       +   +    E A+K F+ R+GL  +G+ D
Sbjct: 400 KGPYQYDQVDDNIQYMQEMLKELGY--KVDRVDGYYSKATEEALKAFEKRYGLAVNGIYD 457

Query: 159 S 159
            
Sbjct: 458 K 458


>gi|159042720|ref|YP_001531514.1| lytic murein transglycosylase [Dinoroseobacter shibae DFL 12]
 gi|157910480|gb|ABV91913.1| lytic murein transglycosylase [Dinoroseobacter shibae DFL 12]
          Length = 389

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 2/70 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   +++L+++L   G       +     A   +AV+  Q R GL 
Sbjct: 319 GAPVFDAGNPEPGLNDAQMKQLQQKLAARGY--DVGAVDGILGARTRAAVRAEQQRLGLP 376

Query: 153 PSGMVDSSTL 162
                  + L
Sbjct: 377 ADAWPTPALL 386


>gi|90419802|ref|ZP_01227711.1| putative serine protease, trypsin family [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335843|gb|EAS49591.1| putative serine protease, trypsin family [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 523

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 10/54 (18%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVES----AVKLFQMRHGLDPSGMVDSSTLE 163
           L+ RL  +GD         A+D  + +    A++ FQ RHG+   G++D + L 
Sbjct: 59  LQIRLSWTGDYA------GAYDGQIAASSLRAIRDFQARHGMVADGVIDEAMLR 106


>gi|71907823|ref|YP_285410.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
 gi|71847444|gb|AAZ46940.1| ErfK/YbiS/YcfS/YnhG [Dechloromonas aromatica RCB]
          Length = 160

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
            Y+H  P+     +     + GC+R+RN    +L   +
Sbjct: 115 IYIHGCPDSSEIGSPG---SHGCIRMRNADIVELFDLV 149


>gi|240137450|ref|YP_002961921.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens AM1]
 gi|240007418|gb|ACS38644.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens AM1]
          Length = 250

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 20/145 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--------- 96
                +    +A     +     I     +A ++ A A  +D      W           
Sbjct: 110 PYPEAQIAAVIALARDIVVRRA-IPGPRVLAHSDVAPARKEDPGEDFPWERLAREGVGHW 168

Query: 97  LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +P  P+       +G++   V+ L+  L + G     + ++  FDA + + V  FQ    
Sbjct: 169 VPPAPVRDGRFFAMGDTGQPVEALQAMLALYGY---EQPVTGHFDAAMRAVVTAFQRHFR 225

Query: 151 -LDPSGMVDSSTLEAMNVPVDLRIR 174
                G+ DSST+  +   +  R  
Sbjct: 226 PARIDGVADSSTITTLRDLIASRPA 250


>gi|119897880|ref|YP_933093.1| hypothetical protein azo1589 [Azoarcus sp. BH72]
 gi|119670293|emb|CAL94206.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 159

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKD 359
           PG  N +         R   Y+H T +           + GC+R+RN  +++L   +   
Sbjct: 100 PG-RNRLGEVDTM---RRYVYIHGTGDDQPMGTPR---SHGCIRMRNREVVELFDLVRPG 152

Query: 360 TPTW 363
           TP  
Sbjct: 153 TPVE 156


>gi|47215736|emb|CAG05747.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 560

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + A  +   VE+A+K  Q  +GL  +G +D  T+EAM  P     D 
Sbjct: 3   LQKFGYLPPGDVRAQALRSPKTVETAIKAMQRFYGLSVTGSIDPQTIEAMRRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK 184
              +L+ NL R +
Sbjct: 63  FGPELKTNLRRKR 75


>gi|17546650|ref|NP_520052.1| phage-related protein (hydrolase) [Ralstonia solanacearum GMI1000]
 gi|17428949|emb|CAD15633.1| putative phage-related protein (hydrolase) [Ralstonia solanacearum
           GMI1000]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G++   V+ L+  L   G    S   +  +DA   +AV+  Q    L   G+    T
Sbjct: 4   LKPGSTGAEVRELQRLLAGRGF---SAADTGEYDAATAAAVRAAQACFDLVVDGIAGPKT 60

Query: 162 LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
           ++A+ V           +L R    L   + 
Sbjct: 61  VQALRVGARQPGHLTAADLQRAAGTLGVPLA 91


>gi|312195803|ref|YP_004015864.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c]
 gi|311227139|gb|ADP79994.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EuI1c]
          Length = 313

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 19/74 (25%), Gaps = 16/74 (21%)

Query: 301 DPGKINAMASTKI----------EFYSRNNT-YMHDTPEPILFNNVVRFETSGCVRVRNI 349
                                   F   N    +H T +P          + GC+R+RN 
Sbjct: 239 PANPAGPWGPYAFGLSGFSDVITNFDGGNGIIGLHGTNQPDRVGTD---VSMGCIRLRNS 295

Query: 350 I--DLDVWLLKDTP 361
               L   L   TP
Sbjct: 296 DITALAALLPVGTP 309


>gi|86138723|ref|ZP_01057296.1| hypothetical protein MED193_22786 [Roseobacter sp. MED193]
 gi|85824783|gb|EAQ44985.1| hypothetical protein MED193_22786 [Roseobacter sp. MED193]
          Length = 222

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 19/65 (29%), Gaps = 3/65 (4%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKL 186
              +         +A++ FQ   GL   G+V   T  A+  P             R+   
Sbjct: 7   PGPVDGIRGKMTSNAIRRFQQSVGLLADGIVGPMTYAALFGPPATGQV---HRFDRMPWF 63

Query: 187 LEQKM 191
            E   
Sbjct: 64  DEANR 68


>gi|306843211|ref|ZP_07475823.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO2]
 gi|306286601|gb|EFM58176.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO2]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G     V+ L+  L + G       ++  FD   E  +K FQ      +  G+ D S
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|306844341|ref|ZP_07476933.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO1]
 gi|306275413|gb|EFM57154.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. BO1]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G     V+ L+  L + G       ++  FD   E  +K FQ      +  G+ D S
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|161619391|ref|YP_001593278.1| protein ampD [Brucella canis ATCC 23365]
 gi|161336202|gb|ABX62507.1| Protein ampD [Brucella canis ATCC 23365]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G     V+ L+  L + G       ++  FD   E  +K FQ      +  G+ D S
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|17986848|ref|NP_539482.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella melitensis bv.
           1 str. 16M]
 gi|23502315|ref|NP_698442.1| N-acetylmuramoyl-L-alanine amidase [Brucella suis 1330]
 gi|62290337|ref|YP_222130.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 1 str.
           9-941]
 gi|82700260|ref|YP_414834.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|148559422|ref|YP_001259335.1| N-acetylmuramoyl-L-alanine amidase [Brucella ovis ATCC 25840]
 gi|163843698|ref|YP_001628102.1| protein ampD [Brucella suis ATCC 23445]
 gi|189024568|ref|YP_001935336.1| peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225852925|ref|YP_002733158.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           ATCC 23457]
 gi|237815842|ref|ZP_04594839.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella abortus str.
           2308 A]
 gi|254689636|ref|ZP_05152890.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|254694126|ref|ZP_05155954.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|254697778|ref|ZP_05159606.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254702163|ref|ZP_05163991.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|254704700|ref|ZP_05166528.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|254708114|ref|ZP_05169942.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|254710483|ref|ZP_05172294.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|254714476|ref|ZP_05176287.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|254717374|ref|ZP_05179185.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|254719473|ref|ZP_05181284.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|254730667|ref|ZP_05189245.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|256031977|ref|ZP_05445591.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|256045072|ref|ZP_05447973.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256061499|ref|ZP_05451643.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella neotomae
           5K33]
 gi|256114001|ref|ZP_05454778.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 3 str. Ether]
 gi|256257886|ref|ZP_05463422.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 9
           str. C68]
 gi|256263595|ref|ZP_05466127.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|256369860|ref|YP_003107371.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella microti CCM
           4915]
 gi|260546877|ref|ZP_05822616.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus NCTC
           8038]
 gi|260565329|ref|ZP_05835813.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260566052|ref|ZP_05836522.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 4
           str. 40]
 gi|260755165|ref|ZP_05867513.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|260758384|ref|ZP_05870732.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|260762210|ref|ZP_05874553.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260884179|ref|ZP_05895793.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 9 str.
           C68]
 gi|261214427|ref|ZP_05928708.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|261219206|ref|ZP_05933487.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|261315618|ref|ZP_05954815.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|261318055|ref|ZP_05957252.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|261322267|ref|ZP_05961464.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|261325507|ref|ZP_05964704.1| N-acetylmuramoyl-L-alanine amidase [Brucella neotomae 5K33]
 gi|261752734|ref|ZP_05996443.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|261755394|ref|ZP_05999103.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|265984481|ref|ZP_06097216.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|265989088|ref|ZP_06101645.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|265991501|ref|ZP_06104058.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|265995339|ref|ZP_06107896.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|294852769|ref|ZP_06793442.1| N-acetylmuramoyl-L-alanine amidase [Brucella sp. NVSL 07-0026]
 gi|297248723|ref|ZP_06932441.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306839252|ref|ZP_07472069.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. NF 2653]
 gi|17982484|gb|AAL51746.1| anhydro-n-acetylmuramyl-tripeptide amidase [Brucella melitensis bv.
           1 str. 16M]
 gi|23348293|gb|AAN30357.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella suis 1330]
 gi|62196469|gb|AAX74769.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella abortus bv.
           1 str. 9-941]
 gi|82616361|emb|CAJ11418.1| Putative peptidoglycan binding domain 1:N-acetylmuramoyl-L-alanine
           amidase, family 2 [Brucella melitensis biovar Abortus
           2308]
 gi|148370679|gb|ABQ60658.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella ovis ATCC
           25840]
 gi|163674421|gb|ABY38532.1| Protein ampD [Brucella suis ATCC 23445]
 gi|189020140|gb|ACD72862.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225641290|gb|ACO01204.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           ATCC 23457]
 gi|237789140|gb|EEP63351.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella abortus str.
           2308 A]
 gi|256000023|gb|ACU48422.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella microti CCM
           4915]
 gi|260095927|gb|EEW79804.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus NCTC
           8038]
 gi|260151397|gb|EEW86491.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. 16M]
 gi|260155570|gb|EEW90650.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 4
           str. 40]
 gi|260668702|gb|EEX55642.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 4
           str. 292]
 gi|260672642|gb|EEX59463.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260675273|gb|EEX62094.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 6
           str. 870]
 gi|260873707|gb|EEX80776.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 9 str.
           C68]
 gi|260916034|gb|EEX82895.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella abortus bv. 3
           str. Tulya]
 gi|260924295|gb|EEX90863.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M13/05/1]
 gi|261294957|gb|EEX98453.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M644/93/1]
 gi|261297278|gb|EEY00775.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           B2/94]
 gi|261301487|gb|EEY04984.1| N-acetylmuramoyl-L-alanine amidase [Brucella neotomae 5K33]
 gi|261304644|gb|EEY08141.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M163/99/10]
 gi|261742487|gb|EEY30413.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 5
           str. 513]
 gi|261745147|gb|EEY33073.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella suis bv. 3
           str. 686]
 gi|262766452|gb|EEZ12241.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002285|gb|EEZ14860.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|263093644|gb|EEZ17649.1| N-acetylmuramoyl-L-alanine amidase [Brucella melitensis bv. 2 str.
           63/9]
 gi|264661285|gb|EEZ31546.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella pinnipedialis
           M292/94/1]
 gi|264663073|gb|EEZ33334.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. 83/13]
 gi|294821358|gb|EFG38357.1| N-acetylmuramoyl-L-alanine amidase [Brucella sp. NVSL 07-0026]
 gi|297175892|gb|EFH35239.1| N-acetylmuramoyl-L-alanine amidase [Brucella abortus bv. 5 str.
           B3196]
 gi|306405799|gb|EFM62061.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella sp. NF 2653]
 gi|326409467|gb|ADZ66532.1| Putative peptidoglycan binding domain 1 [Brucella melitensis M28]
 gi|326539174|gb|ADZ87389.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella melitensis
           M5-90]
          Length = 268

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G     V+ L+  L + G       ++  FD   E  +K FQ      +  G+ D S
Sbjct: 195 LARGEQGQPVEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|229544310|ref|ZP_04433369.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
 gi|229325449|gb|EEN91125.1| carboxyl-terminal protease [Bacillus coagulans 36D1]
          Length = 497

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L + S  V+   + L   G       +   FD   ++AV+ FQM   + P+G+++  T
Sbjct: 410 LKLYSVSEDVKTAEKMLKALGY--NPGRVDGYFDWNTKTAVEAFQMHEKMQPTGIINGDT 467


>gi|47202237|emb|CAF87535.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 279

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P    + A  +   VE+A+K  Q  +GL  +G +D  T+EAM  P     D 
Sbjct: 3   LQKFGYLPPGDVRAQALRSPKTVETAIKAMQRFYGLSVTGSIDPQTIEAMRRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK 184
              +L+ NL R +
Sbjct: 63  FGPELKTNLRRKR 75


>gi|209885148|ref|YP_002289005.1| lytic murein transglycosylase [Oligotropha carboxidovorans OM5]
 gi|209873344|gb|ACI93140.1| lytic murein transglycosylase [Oligotropha carboxidovorans OM5]
          Length = 409

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +Q ++ RL  +G    + G           AVK FQ R GL P G      L  +  
Sbjct: 351 AEIQEVQTRLTKAGF--DTGGTDGRVGNDTMKAVKDFQTRAGLTPDGYAGLKVLARLRQ 407


>gi|114568688|ref|YP_755368.1| peptidoglycan binding domain-containing protein [Maricaulis maris
           MCS10]
 gi|114339150|gb|ABI64430.1| Peptidoglycan-binding domain 1 protein [Maricaulis maris MCS10]
          Length = 450

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 113 RLRER-LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            LR+R L   G    +  +   +      +V+ FQ   G D +G++  +
Sbjct: 234 ALRQRALAALGYY--NGEVDGNYGPMTRRSVRDFQSDLGFDLTGVLTPA 280


>gi|315649800|ref|ZP_07902883.1| carboxyl-terminal protease [Paenibacillus vortex V453]
 gi|315274774|gb|EFU38155.1| carboxyl-terminal protease [Paenibacillus vortex V453]
          Length = 489

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           S  V+  +  L   G    +      FD   E AVK FQ ++ L   G+++
Sbjct: 399 STDVKNAQIMLEAVGY--KTGRSDGYFDRNTEKAVKSFQSKNKLKADGIIN 447


>gi|298293897|ref|YP_003695836.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296930408|gb|ADH91217.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 225

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 53/191 (27%), Gaps = 43/191 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + ++    +R +   + +     ++V+        V      LR  V VG+ +   
Sbjct: 54  PAVDLSKVDPRFLRQEVAYQTRYPAGTIVVDPNERHAYLVLGNGRALRYGVGVGKEEGFN 113

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I R    P W    ++I ++                                  
Sbjct: 114 FRGEGIIARKASWPRWTPTPNMIAREP--------------------------------- 140

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVR 345
                  +      G  N +    +  Y         +H T EP          +SGCVR
Sbjct: 141 --ERYGPYANGMAGGLDNPLGPRALYIYKDGQDTLYRLHGTTEPWTIGT---MVSSGCVR 195

Query: 346 V--RNIIDLDV 354
              ++IIDL  
Sbjct: 196 FMNQDIIDLFR 206


>gi|297194196|ref|ZP_06911594.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
 gi|197722549|gb|EDY66457.1| membrane protein [Streptomyces pristinaespiralis ATCC 25486]
          Length = 434

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 27/80 (33%), Gaps = 5/80 (6%)

Query: 91  RGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMR 148
           + G P  P R     G SS  V +L +RL+  G     + G    +       V+ FQ  
Sbjct: 353 QAGTPAFPGRAHFRPGRSSTYVTQLGKRLVERGYGKHYTSGPDPRWREADRRNVQAFQRA 412

Query: 149 H---GLDPSGMVDSSTLEAM 165
               G    G     T   +
Sbjct: 413 QGWRGAAADGYPGPETWRRL 432


>gi|17231318|ref|NP_487866.1| hypothetical protein all3826 [Nostoc sp. PCC 7120]
 gi|17132960|dbj|BAB75525.1| all3826 [Nostoc sp. PCC 7120]
          Length = 241

 Score = 44.3 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 29/65 (44%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           VQ L+  L      +P       +    E+A+K FQ +H L+ +G+ + +  + ++    
Sbjct: 96  VQILQANLNAVLKTNPPLPRDQFYGPKTEAAIKEFQKKHQLEATGIANLALRQKLDEEAK 155

Query: 171 LRIRQ 175
             I +
Sbjct: 156 KVISK 160



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 7/90 (7%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVPVDLRI 173
           R  L   G  +     +   DA  + A+  FQ  + L    G+    T +         +
Sbjct: 42  RTVLRGLGY-NVKVTNTPLSDAETKKAISEFQKGYKLTPVDGIAGPKTQDF----AANIV 96

Query: 174 RQLQVNLMR-IKKLLEQKMGLRYVLVNIPA 202
           + LQ NL   +K          Y      A
Sbjct: 97  QILQANLNAVLKTNPPLPRDQFYGPKTEAA 126


>gi|255647293|gb|ACU24113.1| unknown [Glycine max]
          Length = 357

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE-SAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S+  V  +++ L   G ++ S  LS + D     SA+K +Q    L P+G +++ TL+ M
Sbjct: 74  SAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYFSLQPTGKLNNETLQQM 133

Query: 166 N-VPVDLRIRQLQVNLMRI---------KKLLEQKMGLRYV-LVNIPAASLEAVEN 210
           + +   +    +  N             +      +   ++    IPA   +   +
Sbjct: 134 SFLRCGVPDINIDYNFTDDNMSYPKAGHRWFPHTNLTYGFLPENQIPANMTKVFRD 189


>gi|229179582|ref|ZP_04306934.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus cereus
           172560W]
 gi|228603876|gb|EEK61345.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus cereus
           172560W]
          Length = 277

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 12/182 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L LG++   V  L+  LI  G       ++  FD       K+FQ +  L P+G+V+ +T
Sbjct: 7   LKLGSTGYYVTVLQLNLIGLGVNYEKLAITGFFDEKTHKCTKIFQEKTKLKPNGIVEVNT 66

Query: 162 LEAMNVPV---DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            +++   V     +++ +     ++  +                       +G +  R+ 
Sbjct: 67  WKSLFENVILIQKKLQSIGFYFGQLDGVFGLSTTQATQEYQK---EQNLYPSGDITPRTR 123

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
             +   + Q+    S I+    +PY      ++ K+ + L + +   L      +     
Sbjct: 124 HKLFNPNSQSEFYTSSIHLQSLHPYV----EMLAKEFLQLTKTNG--LDVRIYSVFRSWS 177

Query: 279 KE 280
           ++
Sbjct: 178 EQ 179


>gi|15893844|ref|NP_347193.1| 1,4-beta-N-acetylmuramidase [Clostridium acetobutylicum ATCC 824]
 gi|462559|sp|P34020|LYS_CLOAB RecName: Full=Autolytic lysozyme; AltName:
           Full=1,4-beta-N-acetylmuramidase; AltName:
           Full=Autolysin
 gi|15023420|gb|AAK78533.1|AE007570_12 Autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of
           glycosyl hydrolases ; peptodoglycan-binding domain
           [Clostridium acetobutylicum ATCC 824]
 gi|144845|gb|AAA23250.1| autolytic lysozyme [Clostridium acetobutylicum]
 gi|325507970|gb|ADZ19606.1| Autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of
           glycosyl hydrolase [Clostridium acetobutylicum EA 2018]
          Length = 324

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 104 LGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            G      ++ +++ L I   L     +        E+A+K FQ   GL   G+  ++T 
Sbjct: 194 PGQGGDDNIKAIQQDLNIL--LKRGLEVDGIEGPETEAAIKDFQSIMGLTVDGIWGTNTS 251

Query: 163 EAMNV 167
            A   
Sbjct: 252 GAAQQ 256



 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                 +   F +  ++ V  +Q   GL   G+V S+T   +
Sbjct: 279 YRVGASVDGTFGSGTKAKVAAWQSNQGLMADGVVGSATWSKL 320


>gi|84500323|ref|ZP_00998589.1| hypothetical protein OB2597_10284 [Oceanicola batsensis HTCC2597]
 gi|84392257|gb|EAQ04525.1| hypothetical protein OB2597_10284 [Oceanicola batsensis HTCC2597]
          Length = 389

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G S   + RL+ RL+  G       +     A    AV+  Q   GL 
Sbjct: 319 GAPVFDAGNPEPGLSDKQMIRLQRRLVARGH--DVGEVDGILGAKTREAVQQVQQELGLP 376

Query: 153 PSGMVDSSTLEAM 165
                  + L  +
Sbjct: 377 ADAWPTPALLNRL 389


>gi|91782629|ref|YP_557835.1| putative phage-related protein (hydrolase) [Burkholderia xenovorans
           LB400]
 gi|91686583|gb|ABE29783.1| Putative phage-related protein (hydrolase) [Burkholderia xenovorans
           LB400]
          Length = 267

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 26/70 (37%), Gaps = 4/70 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S  SV  L+  L       P   +        +SA++ FQ R GL  +GMV   T  A+ 
Sbjct: 7   SGTSVVFLQRTLAQEN---PRLKVDGLSGPDTQSALRRFQQRRGLPDTGMVCEQT-RALL 62

Query: 167 VPVDLRIRQL 176
                    L
Sbjct: 63  TQAARHAGLL 72


>gi|118374921|ref|XP_001020648.1| Peptidoglycan binding domain containing protein [Tetrahymena
           thermophila]
 gi|89302415|gb|EAS00403.1| Peptidoglycan binding domain containing protein [Tetrahymena
           thermophila SB210]
          Length = 873

 Score = 44.3 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 9/64 (14%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V +++  L   G    +      + +  E+AV+ +Q ++ L   G++    +  +  
Sbjct: 165 DEKVLKVQNLLKKQGY---NIETDGFYTSQTENAVREYQKKNNLFEDGVISQELINKIEG 221

Query: 168 PVDL 171
               
Sbjct: 222 KAQK 225


>gi|332668633|ref|YP_004451640.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332337670|gb|AEE44253.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 368

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            ++P  R L  G     V++L++ L   G L         F A   +AV+ +Q   G   
Sbjct: 106 GDVPAFRALTSGLEGPDVRQLQQLLADLGHL--RSAPDGRFRASTTAAVRSWQKASGRPV 163

Query: 154 SGMV 157
           +G V
Sbjct: 164 TGEV 167


>gi|332019904|gb|EGI60365.1| Matrix metalloproteinase-14 [Acromyrmex echinatior]
          Length = 513

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 60/180 (33%), Gaps = 20/180 (11%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P    + AF  +A + +A++ FQ   GL+ +G ++  T + M  P       
Sbjct: 46  LAQYGYLPPINPENGAFLSEAKLTAAIEEFQAFAGLNITGELNEETAKLMATPRCGVKDK 105

Query: 169 ----VDLRIRQLQVNLMRIKK------LLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
                D R ++  +   R +       + +   GL    V    A+  +V  G+  L  T
Sbjct: 106 VGPAADGRSKRYALQGSRWRTKNLTYKISKYPTGLNKQEVEKEIANAFSVWTGETDLTFT 165

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
              G  +     +   +        +  P   +      +   D  +       +   +G
Sbjct: 166 RKTGH-ENVHIEIRFEVGEHGDGDPFDGPGGTLAHAYFPVYGGDAHFDDSERWTIRSYRG 224


>gi|315657286|ref|ZP_07910168.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|315491758|gb|EFU81367.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 501

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/217 (9%), Positives = 49/217 (22%), Gaps = 32/217 (14%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   G + + T  A++         +   +    K  +   G+  + V         V+ 
Sbjct: 302 MTKDGYLLTLTKMALDSKKVSNNETIAAEITAALKAGQNYRGVFEMAVQEGKFHDTVVDE 361

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM----MALLRQDPQYL 266
                      G       + +  +     +     P   +   +       +      L
Sbjct: 362 NLPRPPYKAKPGEKFISIDLTNHTVAAWEGDKVVWGPVEAVHGSLPSPTYPGIFHVQTKL 421

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
            + ++   +            W      ++                           H T
Sbjct: 422 VNAHMKNDNAWDGAYDTWS-PWTMYYHGDYAV-------------------------HGT 455

Query: 327 PEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                +       + GCV +   N  +L  W    TP
Sbjct: 456 NTRWNWVQTNYGGSHGCVNLKPANAKELFNWARVGTP 492


>gi|288941575|ref|YP_003443815.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288896947|gb|ADC62783.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 161

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 27/181 (14%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH----SRINRIMFNPYWVIPR 248
            R ++V+I A  L    + +   R  V  G                ++R+        P 
Sbjct: 2   DRRLVVDIDAQRLTLFIDARPVRRYPVSTGANGVGEDYGSGCTPRGLHRVRLRIGDGCPV 61

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
             + +            L   +        ++  +  + W +        R   G ++ +
Sbjct: 62  GTVFRGRRPTGEIHDAALAAAHPE------RDWILTRILWLT---GCEPGRNRGGSVDTL 112

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                        Y+H  P+           + GC+R+RN +DL   L + TP  +   I
Sbjct: 113 RRF---------IYIHGCPDSEPMGVPR---SHGCIRMRN-LDLIE-LFEQTPNGTPVEI 158

Query: 369 E 369
            
Sbjct: 159 R 159


>gi|240849841|ref|YP_002971229.1| membrane-bound lytic murein transglycosylase [Bartonella grahamii
           as4aup]
 gi|240266964|gb|ACS50552.1| membrane-bound lytic murein transglycosylase [Bartonella grahamii
           as4aup]
          Length = 418

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + L+ RL   G    +  +          A+K FQ+RHGL  +G
Sbjct: 364 KELQSRLSALGYYKGN--VDGKIGTASRKAIKAFQLRHGLKANG 405


>gi|298346210|ref|YP_003718897.1| hypothetical protein HMPREF0573_11084 [Mobiluncus curtisii ATCC
           43063]
 gi|298236271|gb|ADI67403.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
          Length = 492

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/217 (9%), Positives = 49/217 (22%), Gaps = 32/217 (14%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   G + + T  A++         +   +    K  +   G+  + V         V+ 
Sbjct: 293 MTKDGYLLTLTKMALDSKKVSNNETIAAEITAALKAGQNYRGVFEMAVQEGKFHDTVVDE 352

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM----MALLRQDPQYL 266
                      G       + +  +     +     P   +   +       +      L
Sbjct: 353 NLPRPPYKAKPGEKFISIDLTNHTVAAWEGDKVVWGPVEAVHGSLPSPTYPGIFHVQTKL 412

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
            + ++   +            W      ++                           H T
Sbjct: 413 VNAHMKNDNAWDGAYDTWS-PWTMYYHGDYAV-------------------------HGT 446

Query: 327 PEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                +       + GCV +   N  +L  W    TP
Sbjct: 447 NTRWNWVQTNYGGSHGCVNLKPANAKELFNWARVGTP 483


>gi|91216210|ref|ZP_01253178.1| hypothetical protein P700755_06014 [Psychroflexus torquis ATCC
           700755]
 gi|91185727|gb|EAS72102.1| hypothetical protein P700755_06014 [Psychroflexus torquis ATCC
           700755]
          Length = 263

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              +  G      +R++E L      D        F    E  V+ FQ  + ++ +G+V+
Sbjct: 18  PGDIKRGRRGPKAKRVQEWLS---FHDFKTSTDGDFGPATELCVRDFQKENKINETGIVN 74

Query: 159 SSTLEAMNVPVDLRIRQL 176
             T EA+  P+   +  L
Sbjct: 75  QITWEALVKPMTDVLTDL 92


>gi|1170043|sp|P45754|GSPA_AERHY RecName: Full=General secretion pathway protein A
 gi|551216|emb|CAA57225.1| ExeA [Aeromonas hydrophila]
          Length = 547

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIP-----IISKETIAQTEKAIAFYQDILSRGGW 94
           +    H  +    D         + +  P     +I  ++     + ++ +        W
Sbjct: 377 LQALQHPALISLTDETGGIYYATLVNLGPDKANLLIGNQSWQVDRQWLSDFWGGSYTLLW 436

Query: 95  PELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
                    +GN++    VQ L   L  +  L         FDA +++ ++ FQ   GL+
Sbjct: 437 RMPKGGVALIGNNAGATQVQWLDNALSRA--LQQPDRKVRRFDAELKNKLQQFQREQGLN 494

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
           P G+  S+TL  +NV     + +L+    R        
Sbjct: 495 PDGIAGSNTLLRLNVMAGEPMPKLEDESQRASTPATPD 532


>gi|120609665|ref|YP_969343.1| peptidoglycan-binding domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120588129|gb|ABM31569.1| Peptidoglycan-binding domain 1 protein [Acidovorax citrulli
           AAC00-1]
          Length = 356

 Score = 44.3 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  + RL   G                 + ++ FQ   GL  +G +D++T +A++ 
Sbjct: 302 VREAQARLNALGY--DVGAPDGGMGPKTANGLRAFQRDKGLPVTGRLDAATTDALSR 356


>gi|28211938|ref|NP_782882.1| spore cortex-lytic enzyme pre-pro-form [Clostridium tetani E88]
 gi|28204381|gb|AAO36819.1| spore cortex-lytic enzyme pre-pro-form [Clostridium tetani E88]
          Length = 450

 Score = 44.3 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGD---LDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +GN    V+ ++  L    D     P   +   + A  +++VK+FQ    L  +
Sbjct: 329 PGYTLTIGNRGRDVRTIQIYLNRIADNYPAIPKVAVDSVYGASTQNSVKIFQGVFSLPQT 388

Query: 155 GMVDSSTLEAMN 166
           G VD +T   ++
Sbjct: 389 GNVDYATWYKIS 400


>gi|65321540|ref|ZP_00394499.1| COG1376: Uncharacterized protein conserved in bacteria [Bacillus
           anthracis str. A2012]
          Length = 90

 Score = 44.3 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
             +H T +P        + + GC+R++       +L    P  ++  I +  K+ +
Sbjct: 13  YGIHGTNQPSSIGK---YISQGCIRMKKND--VEYLFDRIPIGTKVWIVKSKKSFQ 63


>gi|297182413|gb|ADI18577.1| membrane-bound lytic murein transglycosylase b [uncultured
           Oceanospirillales bacterium HF4000_23O15]
          Length = 385

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            S  +V+ L+ERL   G    S            SA++ +Q    L   G      LEA+
Sbjct: 326 MSVANVKELQERLNALGF--NSGEPDGRVGRRTRSAIRSYQGDSDLPMDGYASIQLLEAV 383

Query: 166 N 166
            
Sbjct: 384 R 384


>gi|163850374|ref|YP_001638417.1| N-acetylmuramoyl-L-alanine amidase [Methylobacterium extorquens
           PA1]
 gi|163661979|gb|ABY29346.1| N-acetylmuramoyl-L-alanine amidase family 2 [Methylobacterium
           extorquens PA1]
          Length = 250

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 22/146 (15%)

Query: 46  SIVNDRFDNFLARVDMGI-DSDIPIISKETIAQTEKAIAFYQDILSRGGWPE-------- 96
                +    +A     +    IP      +A ++ A A  +D      W          
Sbjct: 110 PYPEAQIAAVIALARDIVLRHAIP--GPRVLAHSDVAPARKEDPGEDFPWERLAREGVGH 167

Query: 97  -LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            +P  P+       +G++   V+ L+  L + G     + ++  FDA + + V  FQ   
Sbjct: 168 WVPPAPVRDGRFFAMGDTGQPVEALQAMLALYGY---EQPVTGHFDAAMRAVVTAFQRHF 224

Query: 150 G-LDPSGMVDSSTLEAMNVPVDLRIR 174
                 G+ DSST+  +   +  R  
Sbjct: 225 RPARIDGVADSSTITTLRDLIASRPA 250


>gi|218529961|ref|YP_002420777.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218522264|gb|ACK82849.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 264

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 6/51 (11%)

Query: 301 DPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
             G  N +    +            +H T EP          +SGC+R+ N
Sbjct: 163 AGGLGNPLGPRALYLFEGPRDTLYRIHGTTEPQTIGTD---VSSGCIRMFN 210


>gi|311693485|gb|ADP96358.1| peptidoglycan-binding domain 1 protein-like protein [marine
           bacterium HP15]
          Length = 139

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +  L+  L  +G       +S   D    SA+  FQ  +GL  +G +D  T EA+ +
Sbjct: 30  DEIVALKNALYGAGY--DITNVSPQMDDSTRSALTRFQQDNGLQATGNLDDPTKEALGM 86


>gi|167045565|gb|ABZ10215.1| putative peptidoglycan binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG10I20]
          Length = 360

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G        L++ L + G        +  +      A+   Q  H +   G+ +
Sbjct: 281 PESLGIGYRGKEAIWLQKNLRLLGYF--QGREAPLYGPKTVQAMMKLQRNHSIKDDGIFN 338


>gi|328555228|gb|AEB25720.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens TA208]
 gi|328913589|gb|AEB65185.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens LL3]
          Length = 466

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL    +S  V+  +  L   G           F   ++ AV  FQ R+ LD + ++D
Sbjct: 375 KQPLQPDMNSADVKHAQILLKGLGFDPGRA--DGYFSKTMKKAVLAFQDRNKLDKTAVID 432

Query: 159 SSTLEAMNV 167
             T E MN 
Sbjct: 433 KKTAEKMNQ 441


>gi|308175255|ref|YP_003921960.1| carboxy-terminal processing serine protease [Bacillus
           amyloliquefaciens DSM 7]
 gi|307608119|emb|CBI44490.1| carboxy-terminal processing serine protease, cleaves SpoIVFA, this
           results in processing of pro-SigK [Bacillus
           amyloliquefaciens DSM 7]
          Length = 466

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL    +S  V+  +  L   G           F   ++ AV  FQ R+ LD + ++D
Sbjct: 375 KQPLQPDMNSADVKHAQILLKGLGFDPGRA--DGYFSKTMKKAVLAFQDRNKLDKTAVID 432

Query: 159 SSTLEAMNV 167
             T E MN 
Sbjct: 433 KKTAEKMNQ 441


>gi|222147474|ref|YP_002548431.1| hypothetical protein Avi_0601 [Agrobacterium vitis S4]
 gi|221734464|gb|ACM35427.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 1275

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 24/132 (18%)

Query: 51   RFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP------------ 98
             F    ++ D    +      +E +A++ +  A  +   S   W  +P            
Sbjct: 1146 WFALAASQGDKDAAA-----KQEEVARSMQPAALARAKASVQQWQTMPMNADANTVNLPD 1200

Query: 99   ---IRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
                + L  G+     +V+ ++  L  +G    +        A   +A+K FQ   G +P
Sbjct: 1201 EWVGKSLKTGSVDMEKAVRNIQAILNKNGF--NAGEPDGKLGARTVAAIKAFQTSVGQEP 1258

Query: 154  SGMVDSSTLEAM 165
            SG V +  ++A+
Sbjct: 1259 SGKVSNELVKAL 1270


>gi|284028620|ref|YP_003378551.1| NLP/P60 protein [Kribbella flavida DSM 17836]
 gi|283807913|gb|ADB29752.1| NLP/P60 protein [Kribbella flavida DSM 17836]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 8/76 (10%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           +RG  P      L   ++  +V+ +++ L               + +   +AV  FQ R 
Sbjct: 81  ARGNKPIATKPLLRYADAGSAVRYVQKSL--------DVPAGGWYGSATRTAVANFQRRV 132

Query: 150 GLDPSGMVDSSTLEAM 165
           GL  +G +  +T  ++
Sbjct: 133 GLPRTGTMTVNTWRSL 148


>gi|239630835|ref|ZP_04673866.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|301065157|ref|YP_003787180.1| YbfG [Lactobacillus casei str. Zhang]
 gi|239527118|gb|EEQ66119.1| conserved hypothetical protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|300437564|gb|ADK17330.1| YbfG [Lactobacillus casei str. Zhang]
          Length = 716

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 46/166 (27%), Gaps = 28/166 (16%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRG- 92
           DE +            +     V   +    P   +    TI      +     I + G 
Sbjct: 3   DEAVRAVQK-----WLNKTYGSVPGFV--AAPENGQTGWPTIYSLRMGLQHEIGISAIGE 55

Query: 93  GWPELPI-------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G+ +            L  G      Q ++      G        +  F     +AVK  
Sbjct: 56  GFGDTTKNALAPVVGSLKPGYKGNIAQLIQGAFWCKG--ISPVDFNNEFTNNTLNAVKEL 113

Query: 146 QMRHGLDPSGMVDSSTLEA--------MNVPVDLRIRQLQVNLMRI 183
           Q   G+   G V  + + A        +    D ++R +Q  L R 
Sbjct: 114 QQDAGIAADGSVTVAFMAALFDMAAFVLVSSGDAKVRTMQQALNRK 159


>gi|191636854|ref|YP_001986020.1| YbfG [Lactobacillus casei BL23]
 gi|190711156|emb|CAQ65162.1| YbfG [Lactobacillus casei BL23]
 gi|327380894|gb|AEA52370.1| Peptidoglycan-binding protein [Lactobacillus casei LC2W]
 gi|327384058|gb|AEA55532.1| Peptidoglycan-binding protein [Lactobacillus casei BD-II]
          Length = 716

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 46/166 (27%), Gaps = 28/166 (16%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRG- 92
           DE +            +     V   +    P   +    TI      +     I + G 
Sbjct: 3   DEAVRAVQK-----WLNKTYGSVPGFV--AAPENGQTGWPTIYSLRMGLQHEIGISAIGE 55

Query: 93  GWPELPI-------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G+ +            L  G      Q ++      G        +  F     +AVK  
Sbjct: 56  GFGDTTKNALAPVVGSLKPGYKGNIAQLIQGAFWCKG--ISPVDFNNEFTNNTLNAVKEL 113

Query: 146 QMRHGLDPSGMVDSSTLEA--------MNVPVDLRIRQLQVNLMRI 183
           Q   G+   G V  + + A        +    D ++R +Q  L R 
Sbjct: 114 QQDAGIAADGSVTVAFMAALFDMAAFVLVSSGDAKVRTMQQALNRK 159


>gi|23099120|ref|NP_692586.1| hypothetical protein OB1665 [Oceanobacillus iheyensis HTE831]
 gi|22777348|dbj|BAC13621.1| hypothetical protein [Oceanobacillus iheyensis HTE831]
          Length = 279

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 14/101 (13%)

Query: 77  QTEKAIAFYQ---------DILSRGGWPELPIR---PLHLGNSSVSVQRLRERLIISGDL 124
             + AI  YQ         ++   G W +        +  G        L+  L I+G  
Sbjct: 179 TIKAAIKGYQIELNKQFNANLTVDGIWGQKTKSATVTIASGAKGNITWILQAMLYING-- 236

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  KGL   F     +AV+ FQ +  +   G     T E +
Sbjct: 237 EDPKGLDGIFGDNTNNAVRSFQQKESILVDGKAGKVTWEKL 277


>gi|307944914|ref|ZP_07660251.1| N-acetylmuramoyl-L-alanine amidase AmiD [Roseibium sp. TrichSKD4]
 gi|307771838|gb|EFO31062.1| N-acetylmuramoyl-L-alanine amidase AmiD [Roseibium sp. TrichSKD4]
          Length = 254

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)

Query: 95  PELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           PE+  R +    G S   V+ L+  L I G       ++  FDA    AV+ FQ  +  +
Sbjct: 172 PEVTGRGIFMQEGESGQPVEALQSMLAIFGY---RMEVTGQFDATTRLAVEAFQRHYRPE 228

Query: 153 P-SGMVDSSTLE 163
              G+VD ST+E
Sbjct: 229 QVDGIVDQSTIE 240


>gi|167044834|gb|ABZ09501.1| putative peptidoglycan binding domain protein [uncultured marine
           crenarchaeote HF4000_APKG8D22]
          Length = 335

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L +G        L++ L + G        +  +      A+   Q  H +   G+ +
Sbjct: 256 PESLGIGYRGKEAIWLQKNLRLLGYF--QGREAPLYGPKTVQAMMKLQRNHSIKDDGIFN 313


>gi|304390030|ref|ZP_07371984.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326512|gb|EFL93756.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 501

 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/217 (9%), Positives = 49/217 (22%), Gaps = 32/217 (14%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   G + + T  A++         +   +    K  +   G+  + V         V+ 
Sbjct: 302 MTKDGYLLTLTKMALDSKKVSNNETIAAEITAALKAGQNYRGVFEMAVQEGKFHDTVVDE 361

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM----MALLRQDPQYL 266
                      G       + +  +     +     P   +   +       +      L
Sbjct: 362 NLPRPPYKAKPGEKFISIDLTNHTVAAWEGDKVVWGPVEAVHGSLPSPTYPGIFHVQTKL 421

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
            + ++   +            W      ++                           H T
Sbjct: 422 VNAHMKNDNAWDGAYDTWS-PWTMYYHGDYAV-------------------------HGT 455

Query: 327 PEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                +       + GCV +   N  +L  W    TP
Sbjct: 456 NTRWNWVQTNYGGSHGCVNLKPANAKELFNWARVGTP 492


>gi|117926745|ref|YP_867362.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
 gi|117610501|gb|ABK45956.1| ErfK/YbiS/YcfS/YnhG family protein [Magnetococcus sp. MC-1]
          Length = 181

 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 17/55 (30%), Gaps = 13/55 (23%)

Query: 298 FRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
           F Q PG                  Y+H TP            + GCVR+ +   L
Sbjct: 122 FNQGPGVD----------SYERYIYIHGTPHLADLGQP---VSHGCVRMHSAHLL 163


>gi|315654793|ref|ZP_07907698.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii ATCC 51333]
 gi|315490754|gb|EFU80374.1| ErfK/YbiS/YcfS/YnhG family protein [Mobiluncus curtisii ATCC 51333]
          Length = 492

 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/217 (9%), Positives = 49/217 (22%), Gaps = 32/217 (14%)

Query: 151 LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +   G + + T  A++         +   +    K  +   G+  + V         V+ 
Sbjct: 293 MTKDGYLLTLTKMALDSKKVSNNETIAAEITAALKAGQNYRGVFEMAVQEGKFHDTVVDE 352

Query: 211 GKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM----MALLRQDPQYL 266
                      G       + +  +     +     P   +   +       +      L
Sbjct: 353 NLPRPPYKAKPGEKFISIDLTNHTVAAWEGDKVVWGPVEAVHGSLPSPTYPGIFHVQTKL 412

Query: 267 KDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT 326
            + ++   +            W      ++                           H T
Sbjct: 413 VNAHMKNDNAWDGAYDTWS-PWTMYYHGDYAV-------------------------HGT 446

Query: 327 PEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
                +       + GCV +   N  +L  W    TP
Sbjct: 447 NTRWNWVQTNYGGSHGCVNLKPANAKELFNWARVGTP 483


>gi|146278670|ref|YP_001168829.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556911|gb|ABP71524.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 216

 Score = 44.3 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 48/170 (28%)

Query: 183 IKKLLEQK-MGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +        +    VLV+I + +L    E+G+  L     V   +  T    + + + + 
Sbjct: 72  LDWQPYFSSLRNGAVLVDITSRALHYWSEDGQTYLLFPTSVPLSEDLTRRGRTEVVQKVV 131

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++ +        ++P++                                   
Sbjct: 132 APPWRPTPAMKE--------RNPEW-------------------------------PDMV 152

Query: 301 DPG-KINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             G   N + S  +        Y +H T +        R  ++GC+ + N
Sbjct: 153 PGGAPDNPLGSHALYLS--WTYYRIHGTHDTRKIG---RKSSNGCIGLYN 197


>gi|309791236|ref|ZP_07685768.1| Peptidoglycan-binding domain 1 protein [Oscillochloris trichoides
           DG6]
 gi|308226798|gb|EFO80494.1| Peptidoglycan-binding domain 1 protein [Oscillochloris trichoides
           DG6]
          Length = 500

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 7/73 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GW     R    G +      L+ RL   G    +      F     +A++ FQ    L 
Sbjct: 431 GWQPPASRVFSAGAAD-----LQARLNAQGF--AAGTPDGYFGDQTRTALEAFQTSRNLP 483

Query: 153 PSGMVDSSTLEAM 165
            S  +D +T +A+
Sbjct: 484 VSPNLDCATWQAL 496


>gi|254473060|ref|ZP_05086458.1| lytic murein transglycosylase [Pseudovibrio sp. JE062]
 gi|211957781|gb|EEA92983.1| lytic murein transglycosylase [Pseudovibrio sp. JE062]
          Length = 405

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 18/122 (14%)

Query: 43  SYHSIVNDRFDNFLARVDMGI---------DSDIPIISKETIAQTEKAIAFYQDILSRGG 93
                +   +    A     +           +        +      +      ++   
Sbjct: 279 PRGGDMARLYTPAGANGPAFLLLKNFYVIKRYNNSNAYALGVGHLSDRLLGLSGFVAD-- 336

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    RPL         + L++RL   G       +          A++ +Q   GL P
Sbjct: 337 WPR-GDRPLTF----SEKKALQKRLSEMGY--KPGAVDGKIGQRTRQAIQAYQKASGLVP 389

Query: 154 SG 155
            G
Sbjct: 390 DG 391


>gi|145341529|ref|XP_001415859.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576082|gb|ABO94151.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 355

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 35/90 (38%), Gaps = 12/90 (13%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQMRHGLD 152
           WP      L   +  + V +++  L   G     + +    F +   +A+  FQ  + L 
Sbjct: 246 WP-----VLREDDGGMEVHKMQVILSEQGFDSGEEDMEYWYFGSTTSAALLTFQASNRLP 300

Query: 153 PSGMVDSSTLEA------MNVPVDLRIRQL 176
            +G+ D +T  A      +++     + ++
Sbjct: 301 ETGITDLNTWRALLGDELLDISPADALERI 330



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 11/80 (13%)

Query: 90  SRGGWPELPIRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAF-DAYVESAVKLF 145
             G WP +         +   +     +  +L  +G           F     + A+  F
Sbjct: 88  RSGEWPLVKK-------NDDDIYLMTTIHYKLNEAGFWAGEDDEEDMFFGETTKVALLYF 140

Query: 146 QMRHGLDPSGMVDSSTLEAM 165
           Q   G+  +G+VDS T  A+
Sbjct: 141 QANAGIPETGLVDSDTWRAL 160


>gi|310825690|ref|YP_003958047.1| YkuG [Eubacterium limosum KIST612]
 gi|308737424|gb|ADO35084.1| YkuG [Eubacterium limosum KIST612]
          Length = 712

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  L+  L ++G        +  FD  VE+AV  FQ    L+  G V  ST  A+ V 
Sbjct: 218 ALVYLLQYMLYVNGF--NPGSFNGIFDTGVENAVINFQSLMALEADGWVGLSTWAALLVS 275


>gi|297617864|ref|YP_003703023.1| peptidoglycan-binding protein [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145701|gb|ADI02458.1| Peptidoglycan-binding domain 1 protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 167

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 52/165 (31%), Gaps = 25/165 (15%)

Query: 15  FVYLILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKET 74
           F+ L++   L +       S  + ++     +  +              ++  P +    
Sbjct: 8   FLVLMICSALIIGTTLGFISTREYLVPHLSKTYTDTG--TAKTNSADSDENQAPSVPDPN 65

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGN----------SSVSVQRLRERLIISGDL 124
            +      A Y  +   G    +    L   +          +   V+ ++  L   G  
Sbjct: 66  ASSI-AEKASYSALSRYGQPQTV--NSLRSSDAFASTKLLVLTENEVKEVKAMLQNLGYD 122

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
             S          +  AVK FQ ++ L  +G +D+ TL ++   V
Sbjct: 123 ASS----------LPEAVKQFQEKNHLAATGYLDTETLTSIITQV 157


>gi|124007344|ref|ZP_01692051.1| putative peptidoglycan binding domain protein [Microscilla marina
           ATCC 23134]
 gi|123987177|gb|EAY26917.1| putative peptidoglycan binding domain protein [Microscilla marina
           ATCC 23134]
          Length = 338

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 13/136 (9%)

Query: 99  IRPLHLGNSSV-SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
            RPL  G S     ++++E L   G    +      F    E+AVK FQ +     +G+V
Sbjct: 2   KRPLKKGVSGTGETRKVQEFLKALGHYKGALDDD--FGPKTEAAVKEFQQKRF--VTGIV 57

Query: 158 DSSTLEAMNV-------PVDLRIRQLQVNLMRIKKLLEQKMGLRYV-LVNIPAASLEAVE 209
           +  T +A+         P      + +   ++ K      +   +           +  E
Sbjct: 58  NEFTYDALEEAFAEKNPPPVPLTIKEKQTFLKAKGYYLGAIDGMFGPSSKKAEKDFKLAE 117

Query: 210 NGKVGLRSTVIVGRVD 225
                      + + D
Sbjct: 118 GLDARTNMRAALVKPD 133


>gi|84686736|ref|ZP_01014623.1| ErfK/YbiS/YcfS/YnhG family protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665167|gb|EAQ11646.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 160

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 27/84 (32%), Gaps = 5/84 (5%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMH 324
           L       + EK K              P +  R + G   N + +  +    +    +H
Sbjct: 62  LTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPARIEGGDPDNPLGTRALYLSWQY-YRIH 120

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GC+ + N
Sbjct: 121 GTQDTRKIG---RRSSNGCIGLFN 141


>gi|150388024|ref|YP_001318073.1| carboxyl-terminal protease [Alkaliphilus metalliredigens QYMF]
 gi|149947886|gb|ABR46414.1| carboxyl-terminal protease [Alkaliphilus metalliredigens QYMF]
          Length = 467

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            R   +G+    V+  ++RL   G                  A+  FQ   GL P G++D
Sbjct: 370 TRKPQIGDEGSDVEGAQQRLKAMGYTIKDPQ--GVMGESTYQAIYQFQEDAGLYPYGILD 427

Query: 159 SSTLEAMNV 167
            ST  A++ 
Sbjct: 428 FSTQGALDR 436


>gi|163751936|ref|ZP_02159148.1| general secretion pathway protein a [Shewanella benthica KT99]
 gi|161328152|gb|EDP99318.1| general secretion pathway protein a [Shewanella benthica KT99]
          Length = 542

 Score = 44.3 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G   +S  +Q L   L       P       FDA +E  +  FQ  HGL
Sbjct: 453 WQAPISQPREIGQGSNSEQIQWLENSLAQIDHRAPRLVDG--FDAKLEDKLMRFQREHGL 510

Query: 152 DPSGMVDSSTLEAMN 166
               +  S TL  +N
Sbjct: 511 RADAIAGSQTLVQLN 525


>gi|302390711|ref|YP_003826532.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
 gi|302201339|gb|ADL08909.1| Peptidoglycan-binding domain 1 protein [Thermosediminibacter oceani
           DSM 16646]
          Length = 413

 Score = 44.3 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           +          V+RL++ L   G       +   F    E AV++FQ      P+G+   
Sbjct: 14  KKKKPYIRGTDVRRLQQGLKWLGLYC--GRVDGVFGPETERAVRMFQHHFKDKPTGIAGE 71

Query: 160 STLE 163
              +
Sbjct: 72  KFFK 75


>gi|300694252|ref|YP_003750225.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum PSI07]
 gi|299076289|emb|CBJ35602.2| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum PSI07]
          Length = 404

 Score = 44.3 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            +++L++RL   G       +        ++A++ +Q    L   G    S L  +  
Sbjct: 349 DIKQLQQRLADKGY--DPGTIDGLIGDRTQTAIRAYQKDQHLPQDGYASRSLLARLEK 404


>gi|120608777|ref|YP_968455.1| peptidoglycan-binding domain-containing protein [Acidovorax
           citrulli AAC00-1]
 gi|120587241|gb|ABM30681.1| Peptidoglycan-binding domain 1 protein [Acidovorax citrulli
           AAC00-1]
          Length = 346

 Score = 44.3 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  + RL   G                 + ++ FQ   GL  +G +D++T +A++ 
Sbjct: 292 VREAQARLNALGY--DVGAPDGGMGPKTANGLRAFQKDKGLPVTGRLDAATTDALSR 346


>gi|83943814|ref|ZP_00956272.1| peptidoglycan-binding protein, putative [Sulfitobacter sp. EE-36]
 gi|83845494|gb|EAP83373.1| peptidoglycan-binding protein, putative [Sulfitobacter sp. EE-36]
          Length = 375

 Score = 43.9 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D ++ GG  +    P   G +    + L+ERL   G    + G           A+ 
Sbjct: 295 HLSDRIAGGGPIQASFGPDKYGLTIDDRKALQERLTARGF--DTDGTDGVIGPNSRKAIT 352

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            +Q   GL  +G      L  + 
Sbjct: 353 AYQQSQGLPATGDPSRELLARLG 375


>gi|269955325|ref|YP_003325114.1| peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304006|gb|ACZ29556.1| Peptidoglycan-binding domain 1 protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 212

 Score = 43.9 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 97  LPIRPLHLGNSSVSVQRLRERL----IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           + I  +  G++   V+ L+  L               L   F    + A++  Q  H +D
Sbjct: 134 VTIGKVRKGDTGPDVRLLQGVLNVHGAGVAAGVGVLALDDDFGDKTDKALRAHQTAHKID 193

Query: 153 PSGMVDSSTLE 163
             G+  + +  
Sbjct: 194 VDGVAGADSWR 204


>gi|323141957|ref|ZP_08076813.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
 gi|322413571|gb|EFY04434.1| NlpC/P60 family protein [Phascolarctobacterium sp. YIT 12067]
          Length = 306

 Score = 43.9 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +++L + G     +  S        SA+K FQ +H L   G ++ +T + + 
Sbjct: 117 QQKLQVLGF--SDERPSGRMTEATSSALKSFQKQHKLKADGELNDATYQKLT 166


>gi|127511942|ref|YP_001093139.1| peptidoglycan binding domain-containing protein [Shewanella loihica
           PV-4]
 gi|126637237|gb|ABO22880.1| Peptidoglycan-binding domain 1 protein [Shewanella loihica PV-4]
          Length = 587

 Score = 43.9 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 94  WPELPIRPLHLGNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G  S    +Q L   L      +    L   FDA +E ++  FQ +HGL
Sbjct: 488 WQAPSYQPKEIGRGSAPAQIQWLENALAQIQ--NKPARLVDYFDAELEQSLMDFQRQHGL 545

Query: 152 DPSGMVDSSTLEAMNVPVDLRIRQLQ 177
               +  S TL  +N+ +  +  +LQ
Sbjct: 546 RADAIAGSQTLVQLNLYLSDKGPRLQ 571


>gi|163742343|ref|ZP_02149730.1| peptidoglycan-binding protein, putative [Phaeobacter gallaeciensis
           2.10]
 gi|161384293|gb|EDQ08675.1| peptidoglycan-binding protein, putative [Phaeobacter gallaeciensis
           2.10]
          Length = 370

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               +  L++RL   G    + G         E+A++ +Q   GL  +G    + L  + 
Sbjct: 314 KDDRI-LLQKRLTAKGF--DTGGADGVIGPNSETAIRAYQQSRGLPATGTPSPALLRELG 370


>gi|83645456|ref|YP_433891.1| hypothetical protein HCH_02678 [Hahella chejuensis KCTC 2396]
 gi|83633499|gb|ABC29466.1| uncharacterized protein conserved in bacteria [Hahella chejuensis
           KCTC 2396]
          Length = 160

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H TP+           + GC+R+RN
Sbjct: 116 IYLHGTPDSEPMGEPQ---SHGCIRMRN 140


>gi|163739149|ref|ZP_02146561.1| peptidoglycan binding domain protein [Phaeobacter gallaeciensis
           BS107]
 gi|161387549|gb|EDQ11906.1| peptidoglycan binding domain protein [Phaeobacter gallaeciensis
           BS107]
          Length = 391

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               +  L++RL   G    + G         E+A++ +Q   GL  +G    + L  + 
Sbjct: 335 KDDRI-LLQKRLTAKGF--DTGGADGVIGPNSETAIRAYQQSRGLPATGTPSPALLRELG 391


>gi|154687638|ref|YP_001422799.1| YvjB [Bacillus amyloliquefaciens FZB42]
 gi|154353489|gb|ABS75568.1| YvjB [Bacillus amyloliquefaciens FZB42]
          Length = 466

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL    +S  V+  +  L   G           F   ++ AV  FQ R+ LD + ++D
Sbjct: 375 KQPLQPDMNSADVKHAQILLKGLGFDPGRA--DGYFSKTMKKAVLAFQDRYKLDKTAVID 432

Query: 159 SSTLEAMNV 167
             T E MN 
Sbjct: 433 KKTAEKMNQ 441


>gi|83955291|ref|ZP_00963946.1| peptidoglycan-binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
 gi|83840284|gb|EAP79458.1| peptidoglycan-binding protein, putative [Sulfitobacter sp.
           NAS-14.1]
          Length = 372

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D ++ GG  +    P   G +    + L+ERL   G    + G           A+ 
Sbjct: 292 HLSDRIAGGGPIQASFGPDKYGLTIDDRKALQERLTARGF--DTDGTDGVIGPNSRKAIT 349

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            +Q   GL  +G      L  + 
Sbjct: 350 AYQQSQGLPATGDPSRELLARLG 372


>gi|186686453|ref|YP_001869649.1| hypothetical protein Npun_F6437 [Nostoc punctiforme PCC 73102]
 gi|186468905|gb|ACC84706.1| hypothetical protein Npun_F6437 [Nostoc punctiforme PCC 73102]
          Length = 521

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM----RHGLDPSGM--VDSS 160
            S  V+ ++ RL   G        S   D  +  A+KLFQ     R  ++  G   V   
Sbjct: 293 KSADVKAIKGRLYELGYKWVGDPDSADRDRGLFDAIKLFQSIIAGRSTVNGDGRVDVGGI 352

Query: 161 TLEAMNVPVDLRIRQLQVN 179
           T   +      R   +  +
Sbjct: 353 THRWLQAANAPRWELMPKS 371


>gi|146284084|ref|YP_001174237.1| membrane-bound lytic murein transglycosylase, putative [Pseudomonas
           stutzeri A1501]
 gi|145572289|gb|ABP81395.1| membrane-bound lytic murein transglycosylase, putative [Pseudomonas
           stutzeri A1501]
          Length = 446

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G WP    +PL   + S  +  L+ERL+  G             A    A++ FQ R G
Sbjct: 375 AGSWPR-GEQPL---SRSERL-ELQERLVAQGF--DPGTPDGIIGANTRKAIRGFQQRLG 427

Query: 151 LDPSGMVDSSTLEAMNVPV 169
               G      L  +    
Sbjct: 428 WPADGHPTQELLGRLRAQP 446


>gi|110634753|ref|YP_674961.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110285737|gb|ABG63796.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 1557

 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  +P         +  ++  L   G   P+  +     +    A+  FQ   G   +
Sbjct: 60  PTVKKQPRAPAQDRAQIAEIQRLLNELGY--PAGPVDGQMGSKTRQAIANFQRETGQAVT 117

Query: 155 GMVDSSTLEAMN 166
           G  D   L  + 
Sbjct: 118 GQPDPVLLAVLR 129


>gi|295319659|gb|ADG00037.1| putative peptidoglycan-binding protein [Clostridium botulinum F
           str. 230613]
          Length = 46

 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           G    FD      +K FQ    L   G+V   T +A+
Sbjct: 5   GADDVFDNGTVVGIKYFQRDCNLSVDGIVGRETWKAL 41


>gi|291482585|dbj|BAI83660.1| hypothetical protein BSNT_00388 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 732

 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 101 PLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G+S    V  ++  L  +G           +   V SAVK FQ    L  +G  D 
Sbjct: 211 TLTPGDSRTGFVLIVQYALYCNGKSFDPGEFDGKYGVGVVSAVKAFQEFMRLPQTGYADM 270

Query: 160 STLEAMNVPVDL 171
            T++A+      
Sbjct: 271 PTIKALLSSSGD 282



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-------- 164
           L+  L   G      G +  F    E+AVK FQ   GL    G+V +  ++A        
Sbjct: 84  LQGALWCKGF--NPGGFTGVFYEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFK 141

Query: 165 MNVPVDLRIRQLQVNLMR 182
           +    D RIRQ+Q NL R
Sbjct: 142 LVSGGDSRIRQIQQNLNR 159


>gi|327482401|gb|AEA85711.1| membrane-bound lytic murein transglycosylase, putative [Pseudomonas
           stutzeri DSM 4166]
          Length = 444

 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 7/79 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            G WP    +PL   + S  +  L+ERL+  G             A    A++ FQ R G
Sbjct: 373 AGSWPR-GEQPL---SRSERL-ELQERLVAQGF--DPGTPDGIIGANTRKAIRGFQQRLG 425

Query: 151 LDPSGMVDSSTLEAMNVPV 169
               G      L  +    
Sbjct: 426 WPADGHPTQELLGRLRAQP 444


>gi|110678453|ref|YP_681460.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
 gi|109454569|gb|ABG30774.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter denitrificans OCh
           114]
          Length = 196

 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 51/168 (30%), Gaps = 31/168 (18%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPI---------------LHSRINRIMFNPYWVIPRS 249
           +     G V   + V +   D   P                    ++   +  YW +P  
Sbjct: 12  VSVFMGGTVAAHAAVPITLPDYNMPEKFLPREVRLRNDLDPFEIHVDPGQYALYWTLPDK 71

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF-----VEEVDWNSPEPPNFIFRQDPGK 304
              +  + + R    +L ++         KE        E ++ +      F      G 
Sbjct: 72  RAIRYAVGIGR---THLYEHG-EFFVGAKKEWPSWTPTPEMIERDPQSYARFADGMPGGL 127

Query: 305 INAMASTKIEFYSRNN----TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            N + S  +  ++ +       +H T +P       R  ++GC R+ N
Sbjct: 128 NNPLGSRGLYLFTPSRGDTFLRIHGTNDPETIG---RRVSNGCARLIN 172


>gi|283768499|ref|ZP_06341411.1| C-terminal processing peptidase [Bulleidia extructa W1219]
 gi|283104891|gb|EFC06263.1| C-terminal processing peptidase [Bulleidia extructa W1219]
          Length = 506

 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ +   G           F    + AV  FQ + GL+ +G ++  T  A+
Sbjct: 431 QKAMTYLGY--RPGRTDGYFSEQTKKAVLAFQRKEGLEVTGTINQKTYGAL 479


>gi|163846364|ref|YP_001634408.1| peptidoglycan binding domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524129|ref|YP_002568600.1| peptidoglycan-binding domain 1 protein [Chloroflexus sp. Y-400-fl]
 gi|163667653|gb|ABY34019.1| Peptidoglycan-binding domain 1 protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448008|gb|ACM52274.1| Peptidoglycan-binding domain 1 protein [Chloroflexus sp. Y-400-fl]
          Length = 484

 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +V  ++ RL I G           F      AV  F+   GL     +D +  + +
Sbjct: 422 DPAVADIQARLAILGF--DPGPADGLFGPTTARAVHTFRAAAGLPEGETIDCAAWQEL 477


>gi|254559628|ref|YP_003066723.1| N-acetylmuramoyl-L-alanine amidase [Methylobacterium extorquens
           DM4]
 gi|254266906|emb|CAX22705.1| N-acetylmuramoyl-L-alanine amidase (AGR_C_3833p) [Methylobacterium
           extorquens DM4]
          Length = 250

 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 20/143 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--------- 96
                +    +AR+   I     I     +A ++ A A  +D      W           
Sbjct: 110 PYPEVQI-AAVARLARDIVVRRAIPGPRVLAHSDVAPARKEDPGEDFPWERLAREGVGHW 168

Query: 97  LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +P  P+       +G++   V+ L+  L + G     + ++  FDA + + V  FQ    
Sbjct: 169 VPPAPVRDGRFFAMGDTGQPVEALQAMLALYGY---EQPVTGHFDAAMRAVVTAFQRHFR 225

Query: 151 -LDPSGMVDSSTLEAMNVPVDLR 172
                G+ DSST+  +   +  R
Sbjct: 226 PARIDGVADSSTITTLRDLIASR 248


>gi|254560802|ref|YP_003067897.1| hypothetical protein METDI2352 [Methylobacterium extorquens DM4]
 gi|254268080|emb|CAX23954.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family protein
           [Methylobacterium extorquens DM4]
          Length = 230

 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 18/60 (30%), Gaps = 6/60 (10%)

Query: 292 EPPNFIFRQDPGKINAMASTKIEF---YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
               +      G  N +    +            +H T EP          +SGC+R+ N
Sbjct: 120 RNGPWRNGMAGGLGNPLGPRALYLFEGPRDTLYRIHGTTEPQTIGTD---VSSGCIRMFN 176


>gi|229821443|ref|YP_002882969.1| hypothetical protein Bcav_2962 [Beutenbergia cavernae DSM 12333]
 gi|229567356|gb|ACQ81207.1| hypothetical protein Bcav_2962 [Beutenbergia cavernae DSM 12333]
          Length = 547

 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           R L +G S   V +L+  L+  G +DP    S  FD    SAV     R G
Sbjct: 167 RSLRVGTSGPDVLQLKAALVALG-IDPGNADSDVFDGATASAVDALYARAG 216


>gi|196230495|ref|ZP_03129357.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196225425|gb|EDY19933.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 200

 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 3/31 (9%)

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
                Y+H TPE        R  + GC+R+R
Sbjct: 128 YDRGIYIHGTPEEARIG---RPASYGCIRMR 155


>gi|322418720|ref|YP_004197943.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
 gi|320125107|gb|ADW12667.1| ErfK/YbiS/YcfS/YnhG family protein [Geobacter sp. M18]
          Length = 188

 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 55/183 (30%), Gaps = 51/183 (27%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVI---VGRVDRQT---PILHSRINRIMFNPYWV 245
              Y+ ++I    L   E G  G R+ V    VG   R     P+   ++  + F+P+W 
Sbjct: 39  PHYYIEISISGKRLTLFEKGVHGERTEVAAYPVGTALRGLDTYPLGLGKVTAVQFDPWWY 98

Query: 246 IPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-K 304
                         RQ     ++  I +                         +  PG  
Sbjct: 99  P---------TPYARQV---FRERGIEL-----------------------PAKVPPGDP 123

Query: 305 INAMASTKIEFYSR---NNTY-MHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLK 358
           +N M   KI    +      Y +H   +P       R  T GC  + N    DL   +  
Sbjct: 124 LNYMGPFKISLSHKTRKGAIYRIHGNNDPKRVG---RRVTGGCFVMNNAEGIDLAHRIRV 180

Query: 359 DTP 361
            T 
Sbjct: 181 GTE 183


>gi|303287032|ref|XP_003062805.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455441|gb|EEH52744.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 2265

 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           LP R + LG++   V  L+E              +  +D      V  +Q  +GL  SG 
Sbjct: 84  LPTRDMGLGDAGTDVGMLQE--------AFGLPSTGVYDQRTSKKVARWQEANGLPRSGY 135

Query: 157 VDSSTLEAMNVPVDLRIRQ 175
             +++ E       ++ RQ
Sbjct: 136 FGAASRETFARSAQVQARQ 154


>gi|50401100|sp|Q90YC2|MMP21_CYNPY RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|14787103|dbj|BAB62075.1| matrix metalloproteinase-21 [Cynops pyrrhogaster]
          Length = 616

 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S +  A+    +   Q  LS+ GW E P++    G SS +   L        DL      
Sbjct: 37  SPQHQAELVTDLQSAQQFLSKYGWTE-PVKW--EGTSSKNAAELPR--YGDADLMQEGAS 91

Query: 131 SVAFD----------AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
              +                A++ FQ  +GL  +G +D ST+ AMN P
Sbjct: 92  ISRYGQEFPLEPTQAPAFVEALRKFQTLNGLPATGKLDDSTIAAMNKP 139


>gi|218439324|ref|YP_002377653.1| peptidoglycan-binding protein [Cyanothece sp. PCC 7424]
 gi|218172052|gb|ACK70785.1| Peptidoglycan-binding domain 1 protein [Cyanothece sp. PCC 7424]
          Length = 92

 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V+ L+E L   G       ++  F  Y E +V+ FQ + G+  +G+V+  T +A+N 
Sbjct: 24  GENVKHLQEFLSQLGHYKKD--INGYFCVYTEKSVRDFQFQIGIPVNGIVERRTWQAINR 81


>gi|332835329|ref|XP_003312866.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-21-like
           [Pan troglodytes]
          Length = 569

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 29/143 (20%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L       ++L   +   + +   + F +             P+   + IA    A    
Sbjct: 2   LAASIFRPTLLLCWLAAPWPTQPENLFHSRDRSDLEP----SPLRQAKPIADLHAA---- 53

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q  LSR GW  +                        G        +    A +  AV+ F
Sbjct: 54  QRFLSRYGWSGVWA--------------------AWGPSPEGPPETPK-GAALAEAVRRF 92

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  + L  SG +D++TL AMN P
Sbjct: 93  QRANALPASGELDAATLAAMNRP 115


>gi|300697764|ref|YP_003748425.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074488|emb|CBJ54039.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum CFBP2957]
          Length = 390

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +QRL+++L   G       +        + A++ +Q  H L   G    S L  +  
Sbjct: 334 ADIQRLQQKLTDRGY--NPGTIDGIIGDRTQQAIRAYQKDHQLPQDGYASKSLLARLEQ 390


>gi|218288281|ref|ZP_03492580.1| hypothetical protein AaLAA1DRAFT_0165 [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218241640|gb|EED08813.1| hypothetical protein AaLAA1DRAFT_0165 [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 300

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 42/168 (25%), Gaps = 49/168 (29%)

Query: 104 LGNSSVSVQRLRERLIISGDLD-----------------------------------PSK 128
           LG+    +  L   L   G L                                      +
Sbjct: 62  LGDRGEPILVLHVVLAELGYLPCSYHVAVPTDRLYPQDWARAPIGYWTWNSGVPSELARR 121

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                +    + AV  F+  HGL   G         + + + L +          + ++ 
Sbjct: 122 WDPDRYTEITKGAVMRFEADHGLRVDGYTGPRVRRTLELALALHLT----ATQPYRLVMV 177

Query: 189 QKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRI 235
            +        +IP   L   E+G+ V  ++    G     T      I
Sbjct: 178 DQ--------SIPQ-QLRVWEDGRGVIFQTVCSTGVPAAPTQPGAHAI 216


>gi|254420236|ref|ZP_05033960.1| N-acetylmuramoyl-L-alanine amidase domain protein [Brevundimonas
           sp. BAL3]
 gi|196186413|gb|EDX81389.1| N-acetylmuramoyl-L-alanine amidase domain protein [Brevundimonas
           sp. BAL3]
          Length = 253

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMV 157
              L  G+  +    LR  L   G      G    +DA  E+ V+ FQ     D   G+ 
Sbjct: 172 GGLLQKGDQGIGAVVLRAGLHRLGYGLTPGGD---YDAETETTVRAFQRHWRPDRIDGVA 228

Query: 158 DSSTLEAM 165
           D  T   +
Sbjct: 229 DGETRARL 236


>gi|78212228|ref|YP_381007.1| hypothetical protein Syncc9605_0678 [Synechococcus sp. CC9605]
 gi|78196687|gb|ABB34452.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 179

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 5/76 (6%)

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-SRNNT-YMHDTPEPILFNNVVRFETSG 342
           +V+       +   R+  G  + +    + F+ +      +H T  P          + G
Sbjct: 95  KVNPIYVTHKSGQRRELRGPSSPIGDRYMAFHRNGRGEFGIHGTAWPHWVQIRA-AVSLG 153

Query: 343 CVRVRN--IIDLDVWL 356
           CVR+ N  I  L   +
Sbjct: 154 CVRMLNSHIRQLFDAV 169


>gi|95108222|emb|CAD18391.2| putative membrane-bound lytic murein transglycosylase b protein
           [Ralstonia solanacearum GMI1000]
          Length = 427

 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            ++RL++RL   G       +        ++A++ +Q    L   G    S L  +  
Sbjct: 372 DIKRLQQRLADKGY--DPGTIDGLIGDRTQTAIRAYQKDQHLPQDGYASRSLLARLEK 427


>gi|328542952|ref|YP_004303061.1| N-acetylmuramoyl-L-alanine amidase domain protein [polymorphum
           gilvum SL003B-26A1]
 gi|326412698|gb|ADZ69761.1| N-acetylmuramoyl-L-alanine amidase domain protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 253

 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSSTL 162
           G +   V+ L+  L + G       +S  FDA   +AV  FQ     +   G+ D ST+
Sbjct: 184 GEAGQPVEALQSMLALYGY---DVPISGVFDARTRAAVAAFQRHFRPERVDGIADVSTI 239


>gi|227825038|ref|ZP_03989870.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905537|gb|EEH91455.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 224

 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 46/200 (23%), Gaps = 56/200 (28%)

Query: 160 STLEAMNVPVDLRIRQLQVNLM--RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
            T + M           +      R + +        +++V   A  L  +    V    
Sbjct: 50  ETQKQMPQKAPEPAISPEKAKEADRKESISLDASKSYHIIVEKKAHRLSLLLGDTVVRSY 109

Query: 218 TVIVGRV---------DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
              +G+          D  TP+    ++ I     W                  P    D
Sbjct: 110 GCAIGKGGLGQKQRRGDNMTPVGTFTVDEIDDASSW------------------PHDFGD 151

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPE 328
               +    G       +  ++                            +   +H T +
Sbjct: 152 GRGEIAGAYG----PWFISLDTEALS--------------GGAW------DGIGIHGTHD 187

Query: 329 PILFNNVVRFETSGCVRVRN 348
           P          + GC+R+ N
Sbjct: 188 PQSIGTD---ASEGCIRLHN 204


>gi|261408377|ref|YP_003244618.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
 gi|261284840|gb|ACX66811.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus sp. Y412MC10]
          Length = 468

 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/233 (9%), Positives = 59/233 (25%), Gaps = 24/233 (10%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
             +   G      V+++ L+        R  +L  +L  + +                  
Sbjct: 221 RLKRSAGQWADLQVETAVLQEAAKQYKARHGRLPKSLDELTQPYPNNWLSGRSKAMEQMF 280

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
                +  +          +    T            +P++  P  +I       L    
Sbjct: 281 ETLMQQQSQGAGGQGQAGQQPGNSTEEPGYWGTSPNGDPFFEQPLQVIIDRKRHRLAVVS 340

Query: 264 QYLKDNNIHMIDEKGKE------VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             +   N  +     K       +  + V+ N      +             +  ++  +
Sbjct: 341 GGILLRNYAVGLGGAKTPLGDFHINDKVVNPNGTTKGPY------------GTRGMQLSN 388

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
                +H T +           + GC+R+   ++ +L   +   T    R  +
Sbjct: 389 T-LYAIHGTLDVDSIGANE---SEGCIRMLTEDVEELFDLVPMGTVVKIREGV 437


>gi|253580585|ref|ZP_04857849.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847956|gb|EES75922.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 301

 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 21/45 (46%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           L++ G       +   F + + +AVK FQ   GL  SG  D +T 
Sbjct: 252 LLLHGYNPNGVEIPGIFGSGLLTAVKTFQKAQGLTVSGTCDRNTF 296


>gi|76825185|gb|AAI06861.1| Mmp21 protein [Mus musculus]
          Length = 415

 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 45/168 (26%), Gaps = 44/168 (26%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA---IAFYQDILSRGGWP 95
            +     +     F +             P+   + IA    A   +  Y       GW 
Sbjct: 15  WLVAPQPTQPERLFHSRDRSDLEP----SPLSQAKPIADLHDAQSFLLKY-------GWS 63

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+P         S  V          G               +  AV+ FQ  + L  SG
Sbjct: 64  EIPSPK-----ESAGVP--------VGF-------------TLAQAVRRFQKANRLPASG 97

Query: 156 MVDSSTLEAMNVP----VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            +DS TL AMN P     D R+            L    +  R     
Sbjct: 98  ELDSPTLAAMNKPRCGVPDTRLPPRAALPTPPALLTSLGLRPRARQKR 145


>gi|85707459|ref|ZP_01038539.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
 gi|85668047|gb|EAQ22928.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Roseovarius
           sp. 217]
          Length = 203

 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 18/167 (10%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R      + +    V  NI    + + ++    LR+  I+  +D +     S    +   
Sbjct: 29  RGVAQTNEGLATPAVRSNISGFRVASWQDHFDNLRNGAILCDIDSRAVQFWSEDENVYKL 88

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
               +P +              + L       I  K                P +     
Sbjct: 89  YPSSVPLT--------------EELTRRGYTEIVRKVDGPSWRPTPSMKERNPEWPDFVG 134

Query: 302 PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           PG  N + +  +    +    +H T         V   ++GC+R+ N
Sbjct: 135 PGPDNPLGTHALYLSWQY-YRVHGTVTR---ARSVDNPSNGCLRLYN 177


>gi|302541194|ref|ZP_07293536.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces hygroscopicus ATCC
           53653]
 gi|302458812|gb|EFL21905.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 304

 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 7/77 (9%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH----- 149
           P  P   L    +  S   L+  L  +G +  S   S  +    ++AV  F   H     
Sbjct: 222 PAFPTG-LAPNKAKPSAVTLQRALKATGYMSKSVKESPNYGPATQAAVAKFHNAHPQYRA 280

Query: 150 -GLDPSGMVDSSTLEAM 165
            G      +      A+
Sbjct: 281 KGTTHDVKIGPKGWGAL 297


>gi|240139809|ref|YP_002964286.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
 gi|240009783|gb|ACS41009.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
          Length = 413

 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L+ RL   G   P  G          +A++ FQ   GL P G  D++ L+ +      
Sbjct: 356 LQTRLAALGH--PVGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRAANAP 411


>gi|288941347|ref|YP_003443587.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
 gi|288896719|gb|ADC62555.1| ErfK/YbiS/YcfS/YnhG family protein [Allochromatium vinosum DSM 180]
          Length = 463

 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 51/209 (24%), Gaps = 45/209 (21%)

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
           A       + ++L   L   K        +  ++VN            +    STV  G 
Sbjct: 65  AATETPPEQDKKLSGPLYEWKG---DGRKVTRIVVNTNEQKARFYSGDEEIGWSTVATGL 121

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFV 283
               TP    ++   + N    +                           +  KG  V  
Sbjct: 122 PKYPTPTGRFQVTEKVENKRSNL------------------------YGKVYGKGGRVLR 157

Query: 284 EEVDWNSP---EPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFET 340
             V        +   F     P          +     +   +H  P P       +  +
Sbjct: 158 SSVKVGRDPIPDGGRFEGAHMP--------FFMRLT-DDGVGLHAGPIPN----PGQPAS 204

Query: 341 SGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
            GC+R+     +   L +     +   IE
Sbjct: 205 HGCIRM--PTKIAPVLFRHVSNGTPVTIE 231


>gi|302527360|ref|ZP_07279702.1| predicted protein [Streptomyces sp. AA4]
 gi|302436255|gb|EFL08071.1| predicted protein [Streptomyces sp. AA4]
          Length = 246

 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP L       G+ + +++  + R+   G      G    +D    +AV   Q  +G++ 
Sbjct: 174 WPGL---VYAYGDCAPALRTFQLRMNAFGY--GFSGTGCYYD-KTRTAVLDLQRANGIND 227

Query: 154 SGMVDSSTLEAMNVPVDLR 172
           SG +   T +A       R
Sbjct: 228 SGRLGPKTWKAAWEGKAPR 246


>gi|157693918|ref|YP_001488380.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157682676|gb|ABV63820.1| S41A subfamily peptidase [Bacillus pumilus SAFR-032]
          Length = 482

 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL L  ++  V++ +  L   G       +   FD   + AV  FQ  + LD SG++D
Sbjct: 390 KEPLQLDMNNEEVRQAQTLLK--GLSFDPGRVDGYFDEETKKAVLAFQSTYNLDKSGVID 447

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKK 185
             T + MN  VD  ++  + N ++++ 
Sbjct: 448 LKTAKMMNKMVDE-VKSYEKNDLQLQT 473


>gi|84684354|ref|ZP_01012255.1| hypothetical protein 1099457000260_RB2654_12054 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667333|gb|EAQ13802.1| hypothetical protein RB2654_12054 [Rhodobacterales bacterium
           HTCC2654]
          Length = 548

 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 57/172 (33%), Gaps = 7/172 (4%)

Query: 31  IHASVLDEIINESYHSIVNDRFDNFLARVD-MGIDSDIPIISKETIAQTEKAIAFYQDIL 89
           + A     ++ E      +D F      +D     S          A  ++A A  + I 
Sbjct: 218 LPAGDEGRVVIERTEQSPDDAFWVVARTMDDEEGYSLYLEYFPRG-AHNQEARAALRQIE 276

Query: 90  SRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                 +      L+L  ++    +++  L + G     KG+   F     +A++ +Q  
Sbjct: 277 DNRANRDETAEAALNLNQAARR--QVQRNLALLGH--DPKGIDGIFGPATRAAIRSYQSA 332

Query: 149 HGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +    +G +    L  M    D R  QL+      +   E++    +  +  
Sbjct: 333 NDFTVTGYLSRDMLARMTAQADDRAEQLEREAAERQARQEREDRRYWEQIGQ 384



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 36/142 (25%), Gaps = 12/142 (8%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFD----NFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
             +    LD+I             D               + +        A  ++A A 
Sbjct: 404 SEVAQDRLDDIEAAKRSEAQAQERDFWDRVRNEDKPGSYRAYLDRYPNGLFA--QEARAR 461

Query: 85  YQDILSRGGWPELPIRPLHLGNS--SVSVQRL--RERLIISGDLDPSKGLSVAFDAYVES 140
              +                  +     V RL    RL+  G       +   F      
Sbjct: 462 LDQLSQNQQNEAQMAAAEREEQTVAGNQVTRLLVENRLVSLGF--DIPEVDGVFGPTARR 519

Query: 141 AVKLFQMRHGLDPSGMVDSSTL 162
           A++ FQ   GL  +G V   T+
Sbjct: 520 AIRRFQSSRGLPVTGFVTQETM 541


>gi|110635074|ref|YP_675282.1| lytic murein transglycosylase [Mesorhizobium sp. BNC1]
 gi|110286058|gb|ABG64117.1| lytic murein transglycosylase [Chelativorans sp. BNC1]
          Length = 407

 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++RL   G       +          A++ FQ R GL   G      L  + 
Sbjct: 354 ELQKRLGTLGYY--EGEIDGKVGQASREAIRAFQSRMGLAQDGHPSKEVLNVLR 405


>gi|171702397|dbj|BAG16271.1| matrix metalloproteinase 9 [Rhabdophis tigrinus tigrinus]
          Length = 677

 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 98  PIRPLHLGNSSVSVQRLRER------LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  P+ +     ++  L +R      L   G L  S          +E+ +K  Q + GL
Sbjct: 28  PKGPVVVNFPGDALSLLTDRELAARYLQRYGYLTASNPGGQV---KLETPLKAMQKQLGL 84

Query: 152 DPSGMVDSSTLEAMNVP 168
             +G +D+STL AM  P
Sbjct: 85  PETGELDASTLAAMRAP 101


>gi|296330269|ref|ZP_06872750.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305676126|ref|YP_003867798.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296152537|gb|EFG93405.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305414370|gb|ADM39489.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 480

 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +  ++  V+  +  L   G           F   ++ AV  FQ ++ LD +G++D
Sbjct: 389 KEPLKVDMNNEDVKHAQVLLK--GLSFDPGRDDGYFSKDMKKAVMAFQDQNKLDKTGVID 446

Query: 159 SSTLEAMNVPVDLR 172
           + T EA+N  V+ +
Sbjct: 447 TRTAEALNQLVEKK 460


>gi|256389541|ref|YP_003111105.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256355767|gb|ACU69264.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 360

 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)

Query: 95  PELPIRPLHLGNSS------VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           P LP  PL  G+          V+RL++ L ++  L+ +   +  FD     AV  +Q  
Sbjct: 280 PNLPGGPLG-GDKHHRGNNPADVKRLQQALAVA--LNTNLKATGQFDLDTFGAVVQYQGA 336

Query: 149 HGLDPSGMVDSSTLEAMNV 167
             + P G+V+ +   A+  
Sbjct: 337 MHMTPDGLVNGTVWAALQQ 355


>gi|163761080|ref|ZP_02168157.1| putative amidase (ampd protein) [Hoeflea phototrophica DFL-43]
 gi|162281631|gb|EDQ31925.1| putative amidase (ampd protein) [Hoeflea phototrophica DFL-43]
          Length = 259

 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 85  YQDILSRGGW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           Y++ +  G W    P    R    G+S   V+ L+  L + G       +   + A   +
Sbjct: 168 YREGI--GHWVEPLPVGGGRFFQEGDSGQPVEALQTMLALYGY---GLEVDGVYSAQTAA 222

Query: 141 AVKLFQMRHG-LDPSGMVDSSTL 162
            V+ FQ         G+ D+ST+
Sbjct: 223 VVRAFQRHFRPARVDGIADASTI 245


>gi|89071137|ref|ZP_01158335.1| hypothetical protein OG2516_13961 [Oceanicola granulosus HTCC2516]
 gi|89043322|gb|EAR49545.1| hypothetical protein OG2516_13961 [Oceanicola granulosus HTCC2516]
          Length = 255

 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 9/91 (9%)

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY--MHDTPEPILFNNVVRF 338
              ++    +   +      G  N + +  +      R +TY  +H T +P         
Sbjct: 105 PGMIEREPEKYQQYADGMPGGPGNPLGARALYLFQPERGDTYLRIHGTDKPETIKQD--- 161

Query: 339 ETSGCVRV--RNIIDLDVWLLKDTPTWSRYH 367
            ++GC R+  R II+L   +  DT  +    
Sbjct: 162 VSNGCARLVDRQIIELYDRVPLDTKVYLYEK 192


>gi|328884149|emb|CCA57388.1| hypothetical protein SVEN_4102 [Streptomyces venezuelae ATCC 10712]
          Length = 122

 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +G           F    + A++ FQ   GL P G+V  +T
Sbjct: 60  WKTGY--HPIAEDRIFGPDTDGAIRAFQQWKGLRPDGIVGPAT 100


>gi|13475412|ref|NP_106976.1| hypothetical protein mll6473 [Mesorhizobium loti MAFF303099]
 gi|14026164|dbj|BAB52762.1| mll6473 [Mesorhizobium loti MAFF303099]
          Length = 196

 Score = 43.5 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 8/77 (10%)

Query: 290 SPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
               P        G  N + +  +      R+  Y +H T +P          TSGC R+
Sbjct: 119 RARQPELPELVPSGPYNPLGARALYLLRDGRDTLYRIHGTNDPSGVGFDG---TSGCFRL 175

Query: 347 RN--IIDLDVWLLKDTP 361
            N  +IDL   +   T 
Sbjct: 176 TNTDVIDLFKRVPVGTK 192


>gi|288962623|ref|YP_003452917.1| plasma membrane H+-transporting two-sector ATPase [Azospirillum sp.
           B510]
 gi|288914889|dbj|BAI76373.1| plasma membrane H+-transporting two-sector ATPase [Azospirillum sp.
           B510]
          Length = 1139

 Score = 43.5 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  V++ +E L   G    S           + AV+ FQ   GL P+G +D+ TL  + +
Sbjct: 57  SAEVRQAQEALRGKGFDVGSSDGQP--GERTQRAVRAFQRGQGLTPTGTLDAETLRRLGI 114

Query: 168 PVDLRIRQLQ 177
                  Q  
Sbjct: 115 GDSAPASQPA 124


>gi|158423847|ref|YP_001525139.1| lytic murein transglycosylase [Azorhizobium caulinodans ORS 571]
 gi|158330736|dbj|BAF88221.1| lytic murein transglycosylase [Azorhizobium caulinodans ORS 571]
          Length = 421

 Score = 43.5 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMN 166
             +Q +++RL   G    + G           AVK FQ R GL    G      L A+ 
Sbjct: 362 AELQEIQQRLTRLGF--DTGGTDGRVGNDTMRAVKAFQQRAGLTPADGYPGLQVLTALR 418


>gi|163852472|ref|YP_001640515.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
 gi|163664077|gb|ABY31444.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
          Length = 413

 Score = 43.5 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L+ RL   G   P  G          +A++ FQ   GL P G  D++ L+ +  
Sbjct: 356 LQTRLAALGH--PVGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRA 407


>gi|91977869|ref|YP_570528.1| N-acetylmuramoyl-L-alanine amidase [Rhodopseudomonas palustris
           BisB5]
 gi|91684325|gb|ABE40627.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Rhodopseudomonas
           palustris BisB5]
          Length = 288

 Score = 43.5 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 10/85 (11%)

Query: 86  QDILSRG--GW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + + G   W    P        LG     ++ +++ L   G        +  +D    
Sbjct: 187 RSLAASGVGHWVEPAPIEAGAGFRLGAEGEQIRVMQQALADYGY---GISATGKYDPATV 243

Query: 140 SAVKLFQMRHG-LDPSGMVDSSTLE 163
             V  FQ         G+ D STL 
Sbjct: 244 EVVSAFQRHFRPEKVDGVADGSTLA 268


>gi|86743131|ref|YP_483531.1| peptidoglycan binding domain-containing protein [Frankia sp. CcI3]
 gi|86569993|gb|ABD13802.1| Peptidoglycan-binding domain 1 [Frankia sp. CcI3]
          Length = 266

 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 22/78 (28%), Gaps = 13/78 (16%)

Query: 101 PLHLGNSSVSVQRLRERLII-------SGDLDPSKGLSVAFDAYVESAVKLFQM----RH 149
            L  G+    V  L+  L I       +GD          +     + V   Q       
Sbjct: 180 TLREGSRGPDVVELQNALNIIFGHEAPTGD-PNRITPDGVYGPRTTARVASLQRYAAPWF 238

Query: 150 G-LDPSGMVDSSTLEAMN 166
           G +   G+   +T   + 
Sbjct: 239 GRIPDDGVCGPNTWRKIG 256


>gi|146278312|ref|YP_001168471.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556553|gb|ABP71166.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 182

 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 40/151 (26%), Gaps = 44/151 (29%)

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
           L   E+G V  R    V      + +  +RI R +  P W    ++ ++D          
Sbjct: 63  LFWSEDGTVHRRFPAAVPAARDLSRVGLTRIIRKVEGPTWRPTPAMRERD---------- 112

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
                                        P       PG  N   +  +     +   +H
Sbjct: 113 -----------------------------PGLPASLPPGPGNPFGTHALCLEWDH-FRIH 142

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
              +P L          GC+ + N  D+   
Sbjct: 143 GISDPALLGGE---VAHGCIGLHNA-DIAEL 169


>gi|163794075|ref|ZP_02188048.1| hypothetical protein BAL199_01639 [alpha proteobacterium BAL199]
 gi|159180689|gb|EDP65208.1| hypothetical protein BAL199_01639 [alpha proteobacterium BAL199]
          Length = 493

 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++ ++  L   G                 +A++ +Q   GL   G+ D++ L +++ P
Sbjct: 207 IRLIQATLTERGY--QPGPSDGVMGQATINAIRTYQTDAGLPVDGVADAALLASLDKP 262


>gi|149376588|ref|ZP_01894348.1| ErfK/YbiS/YcfS/YnhG [Marinobacter algicola DG893]
 gi|149359106|gb|EDM47570.1| ErfK/YbiS/YcfS/YnhG [Marinobacter algicola DG893]
          Length = 145

 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H TP+           + GC+R+RN
Sbjct: 102 IYIHGTPDTEPMGVPR---SHGCIRMRN 126


>gi|109392314|ref|YP_655544.1| gp27 [Mycobacterium phage Halo]
 gi|189043114|ref|YP_001936055.1| hypothetical protein BPs1_27 [Mycobacterium phage BPs]
 gi|239590038|ref|YP_002941885.1| gp27 [Mycobacterium phage Angel]
 gi|91980564|gb|ABE67284.1| hypothetical protein Halo27 [Mycobacterium phage Halo]
 gi|171909229|gb|ACB58186.1| hypothetical protein BPs1_27 [Mycobacterium phage BPs]
 gi|238890570|gb|ACR77559.1| gp27 [Mycobacterium phage Angel]
 gi|255927871|gb|ACU41491.1| gp27 [Mycobacterium phage Hope]
          Length = 438

 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 4/65 (6%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSST 161
             G     V+ L+ RL  +        +   F  + E+ V+ +Q  H  L   G+V  +T
Sbjct: 374 RPGQDPRQVRVLQTRLKRA---YSKLDVDGIFGPHTEACVRDYQHLHPPLVADGIVGPAT 430

Query: 162 LEAMN 166
             A+ 
Sbjct: 431 AAALG 435


>gi|269128526|ref|YP_003301896.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268313484|gb|ACY99858.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 440

 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           R L  G+    V++L   L   G       L   +D   E AV+ +  +HG +P+G
Sbjct: 134 RTLGPGDKGEDVEQLERALARLGF--DPGRLDGRYDGATERAVEKWYGKHGYEPAG 187


>gi|295688551|ref|YP_003592244.1| N-acetylmuramyl-L-alanine amidase [Caulobacter segnis ATCC 21756]
 gi|295430454|gb|ADG09626.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Caulobacter segnis ATCC 21756]
          Length = 242

 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 90  SRGGW---PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
             G W   P  P  PL  G     V  L+  L   G        +  +D +  + V  FQ
Sbjct: 157 GHGLWIEPPPSPGAPLGQGEEGTGVFALQAGLTRLGF---DCAPTGKYDEWTTTVVAAFQ 213

Query: 147 MRHGLDP--SGMVDSSTLEAM 165
            RH L     G+ D  T   +
Sbjct: 214 -RHWLQSRFDGIADGETRARL 233


>gi|255648146|gb|ACU24527.1| unknown [Glycine max]
          Length = 388

 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 17/107 (15%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   G ++ S+  + +FD    SA+K +Q    L  +G+ +   ++ M     LR     
Sbjct: 97  LSEYGYIESSRPFNNSFDQETMSAIKTYQKFSNLPVTGVPNKQLIQQML---SLRCGVPD 153

Query: 178 VNLMR-------------IKKLLEQKMGLRYV-LVNIPAASLEAVEN 210
           VN                 +    + +   ++    IP    +   +
Sbjct: 154 VNFDYNFTDDNTSYPKAGHRWFPNRNLTYGFLPENQIPDNMTKVFRD 200


>gi|254562224|ref|YP_003069319.1| membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
 gi|254269502|emb|CAX25468.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
          Length = 413

 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L+ RL   G   P  G          +A++ FQ   GL P G  D++ L+ +  
Sbjct: 356 LQTRLAALGH--PVGGADGKIGPKTRAAIRAFQEAKGLVPDGYADAALLDRVRA 407


>gi|311694519|gb|ADP97392.1| peptidoglycan-binding domain 1 protein-like protein [marine
           bacterium HP15]
          Length = 373

 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 25/45 (55%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           D  + +A++ +Q ++GL  +G +D++TL+A+ V           +
Sbjct: 60  DEQLRAAIRAYQAQNGLQTNGNLDTATLKALGVTKTSSATITANS 104


>gi|227534613|ref|ZP_03964662.1| peptidoglycan-binding protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227187753|gb|EEI67820.1| peptidoglycan-binding protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 716

 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 46/166 (27%), Gaps = 28/166 (16%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRG- 92
           DE +            +     V   +    P   +    TI      +     I + G 
Sbjct: 3   DEAVRAVQK-----WLNKTYGSVPGFV--AAPENGQTGWPTIYSLRMGLQHEIGISAIGE 55

Query: 93  GWPELPI-------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G+ E            L  G      Q ++      G        +  F     +AVK  
Sbjct: 56  GFGETTKNALAPVVGSLKPGYKGNIAQLIQGAFWCKG--ISPVDFNNEFTNNTLNAVKEL 113

Query: 146 QMRHGLDPSGMVDSSTLEA--------MNVPVDLRIRQLQVNLMRI 183
           Q   G+   G V  + + A        +    D ++R +Q  L R 
Sbjct: 114 QQDAGIAADGSVTVAFMAALFDMAAFVLVSNGDAKVRTMQQALNRK 159


>gi|291520973|emb|CBK79266.1| Cell wall-associated hydrolases (invasion-associated proteins)
           [Coprococcus catus GD/7]
          Length = 331

 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
              G  +        + + +   V  FQ +HGLD +G VD +T  AM +  + 
Sbjct: 122 QTLGLGNAVGMNGALYTSEIADTVADFQAQHGLDATGTVDLTTWLAMGLSEED 174


>gi|226526936|ref|YP_002790956.1| hypothetical protein pLB925A03_p3 [Lactobacillus brevis]
 gi|226442528|dbj|BAH56399.1| hypothetical protein [Lactobacillus brevis]
          Length = 716

 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 46/166 (27%), Gaps = 28/166 (16%)

Query: 37  DEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRG- 92
           DE +            +     V   +    P   +    TI      +     I + G 
Sbjct: 3   DEAVRAVQK-----WLNKTYGSVPGFV--AAPENGQTGWPTIYSLRMGLQHEIGISAIGE 55

Query: 93  GWPELPI-------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           G+ +            L  G      Q ++      G        +  F     +AVK  
Sbjct: 56  GFGDTTKNALAPVVGNLKPGYKGNIAQLIQGAFWCKG--ISPVDFNNEFTNNTLNAVKEL 113

Query: 146 QMRHGLDPSGMVDSSTLEA--------MNVPVDLRIRQLQVNLMRI 183
           Q   G+   G V  + + A        +    D ++R +Q  L R 
Sbjct: 114 QQDAGIAADGSVTVAFMAALFDMAAFVLVSSGDAKVRTMQQALNRK 159


>gi|92114190|ref|YP_574118.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
 gi|91797280|gb|ABE59419.1| ErfK/YbiS/YcfS/YnhG [Chromohalobacter salexigens DSM 3043]
          Length = 173

 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 5/50 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLK--DTPTW 363
             R   Y+H TP+           + GC+R+R+   L V+      TP W
Sbjct: 124 SQRRYIYLHGTPDDQPMGVP---ASHGCIRLRDAALLSVFAAAPPGTPVW 170


>gi|312113681|ref|YP_004011277.1| lytic murein transglycosylase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218810|gb|ADP70178.1| lytic murein transglycosylase [Rhodomicrobium vannielii ATCC 17100]
          Length = 415

 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 13/111 (11%)

Query: 61  MGIDSDIPIISKETIAQTEKAIAFY-QDILSRGGW-PELPIRPLHLGNSSVSVQRLRERL 118
             I S  P     T A    AIA     +   G +  + P        +   VQ L++RL
Sbjct: 313 DAIKSYNPA---NTYAL---AIAHLGDRLKGEGPFVQQFPGGERAP--TLAEVQELQKRL 364

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNVP 168
             +G    + G           A++ FQ++ G+    G      L  +   
Sbjct: 365 TAAGF--DTDGTDGRVGKDTMKAIRDFQLKVGMQPADGYAGLKVLARLRAS 413


>gi|23308683|ref|NP_694423.1| matrix metalloproteinase-21 precursor [Mus musculus]
 gi|50401063|sp|Q8K3F2|MMP21_MOUSE RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|22252944|gb|AAM94032.1| matrix metalloproteinase-21 [Mus musculus]
 gi|22854900|gb|AAN09805.1| matrix metalloproteinase 21 [Mus musculus]
 gi|76827853|gb|AAI06862.1| Matrix metallopeptidase 21 [Mus musculus]
 gi|148685821|gb|EDL17768.1| matrix metallopeptidase 21 [Mus musculus]
          Length = 568

 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 45/168 (26%), Gaps = 44/168 (26%)

Query: 39  IINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKA---IAFYQDILSRGGWP 95
            +     +     F +             P+   + IA    A   +  Y       GW 
Sbjct: 15  WLVAPQPTQPERLFHSRDRSDLEP----SPLSQAKPIADLHDAQSFLLKY-------GWS 63

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           E+P         S  V          G               +  AV+ FQ  + L  SG
Sbjct: 64  EIPSPK-----ESAGVP--------VGF-------------TLAQAVRRFQKANRLPASG 97

Query: 156 MVDSSTLEAMNVP----VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            +DS TL AMN P     D R+            L    +  R     
Sbjct: 98  ELDSPTLAAMNKPRCGVPDTRLPPRAALPTPPALLTSLGLRPRARQKR 145


>gi|332710465|ref|ZP_08430412.1| opcA protein [Lyngbya majuscula 3L]
 gi|332350796|gb|EGJ30389.1| opcA protein [Lyngbya majuscula 3L]
          Length = 451

 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ++ L   G       +       + +A+K  Q  +GL  +G  D +T   +    +  ++
Sbjct: 59  QQLLAALGYYS--GPIDGILGPRMVAALKAAQKAYGLARTGKADEATKAKLREEYNESLQ 116

Query: 175 --QLQVNLM 181
             Q Q NL 
Sbjct: 117 KGQRQKNLQ 125


>gi|239832320|ref|ZP_04680649.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum intermedium LMG
           3301]
 gi|239824587|gb|EEQ96155.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum intermedium LMG
           3301]
          Length = 268

 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           E  IA Y +       P    R L  G +   V+ L+  L + G       ++  FD   
Sbjct: 177 EAGIAHYIE-----PTPIRGGRFLARGENGQPVEALQSMLALYGY---GIAITGIFDEDT 228

Query: 139 ESAVKLFQMRHG-LDPSGMVDSSTLE 163
           E+ +K FQ      +  G+ D ST++
Sbjct: 229 ETVIKAFQRHFRPQNVDGVADVSTID 254


>gi|304319699|ref|YP_003853342.1| plasma membrane H+-transporting two-sector ATPase, C subunit
           [Parvularcula bermudensis HTCC2503]
 gi|303298602|gb|ADM08201.1| plasma membrane H+-transporting two-sector ATPase, C subunit
           [Parvularcula bermudensis HTCC2503]
          Length = 924

 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 2/76 (2%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               +++  +E+L+  G                 SA++ FQ    L  SG +D  T+  +
Sbjct: 7   AQDPAIRSAQEQLLERGY--EPGPADGFSGPRTVSAIEAFQRDQDLVVSGELDDQTVARL 64

Query: 166 NVPVDLRIRQLQVNLM 181
           + P         ++  
Sbjct: 65  SAPSVAPAPLPDIDYE 80


>gi|83745679|ref|ZP_00942737.1| Membrane-bound lytic murein transglycosylase B [Ralstonia
           solanacearum UW551]
 gi|83727756|gb|EAP74876.1| Membrane-bound lytic murein transglycosylase B [Ralstonia
           solanacearum UW551]
          Length = 427

 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +QRL+++L   G       +        + A++ +Q  H L   G    S L  +  
Sbjct: 371 ADIQRLQQKLTDRGY--DPGTIDGIIGDRTQQAIRAYQKDHQLPQDGYASRSLLARLEQ 427


>gi|328871173|gb|EGG19544.1| hypothetical protein DFA_00122 [Dictyostelium fasciculatum]
          Length = 971

 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 12/98 (12%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ----MRHGL----DPSGMVDSSTL 162
           V+ L+  L     L     +   +D    +AVK FQ     ++G+    +  G +D  T 
Sbjct: 382 VKELQAALSHLNYLPLLTRIDGQYDQKTINAVKAFQIDNNRKNGISNSKEVEGYIDQFTF 441

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           +     +   I  L+  L  +           Y+  N 
Sbjct: 442 K----GIAEDINNLKRKLESLGYKPPNHPIKDYMSFNE 475


>gi|196234069|ref|ZP_03132903.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196221818|gb|EDY16354.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 198

 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 39/168 (23%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
               + +++       +++GKV   S +  GR    TP    ++                
Sbjct: 19  APLAIDIDLGLQKAFLLQDGKVVYESPICSGRPGHLTPTGDFQV---------------- 62

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                  L +D  +L      ++D  GK +  +  D +   P    F Q P         
Sbjct: 63  -------LEKDENHLSSLYGRIVDTNGKTLVRDA-DADMSVPKGAKFVQAP--------M 106

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII-DLDVWLLK 358
           K        T +H    P          + GCVR+  +  +L   + +
Sbjct: 107 KHFLRFDGATGLHSGYLPGY------PASHGCVRMPEVKAELFYSIAE 148


>gi|310828762|ref|YP_003961119.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
 gi|308740496|gb|ADO38156.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
          Length = 330

 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 110 SVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V R++E L   G D+    G          +A+K FQ ++GL+  G+    T  A+ +
Sbjct: 276 EVARIQEALKRHGHDIPVDGGAGPI----TFAALKDFQAKNGLEADGICGDLTRAALGI 330


>gi|297205125|ref|ZP_06922521.1| periplasmic protease [Lactobacillus jensenii JV-V16]
 gi|297149703|gb|EFH30000.1| periplasmic protease [Lactobacillus jensenii JV-V16]
          Length = 638

 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           Y  +      P +     +LG +   V+   +  RL   G           ++    +AV
Sbjct: 399 YYQVQYNQIQPSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNAV 451

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
           K FQ  HGL+P+G+VD +T 
Sbjct: 452 KNFQASHGLNPTGIVDLATW 471


>gi|310816330|ref|YP_003964294.1| peptidoglycan-binding domain 1 protein [Ketogulonicigenium vulgare
           Y25]
 gi|308755065|gb|ADO42994.1| peptidoglycan-binding domain 1 protein [Ketogulonicigenium vulgare
           Y25]
          Length = 272

 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 14/101 (13%)

Query: 84  FYQDILSRGGW--------PELPIRPLH---LGNSSVSVQRLRERLIISGDLDPSKGLSV 132
             Q I ++GG         P +         LG +    + ++ RL   G    ++G   
Sbjct: 174 QVQQIAAQGGNVTPTPTPNPNVATDQQEEQLLGLTLAERREIQTRLTALGY--NTRGADG 231

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-VPVDLR 172
            F     +A+  FQ  +    +G + +  L A+      +R
Sbjct: 232 VFGQNTRNAIAGFQRDNSASITGYITADQLRALRSQTPSVR 272


>gi|294506301|ref|YP_003570359.1| conserved hypothetical protein containing ErfK/YbiS/YcfS/YnhG
           [Salinibacter ruber M8]
 gi|294342629|emb|CBH23407.1| conserved hypothetical protein containing ErfK/YbiS/YcfS/YnhG
           [Salinibacter ruber M8]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 29/112 (25%), Gaps = 9/112 (8%)

Query: 266 LKDNNIHMIDEKGKEVFVE-EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           L    I                ++N  E         PG+   M      F++    ++H
Sbjct: 157 LARWGIVNTGNPDSTATPTGRFNFNWKEKKRVSTMSPPGEEWTM-RWVFNFHAARGIHIH 215

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
               P          + GCVR+ +      W+      W          + +
Sbjct: 216 QYSMP-----TGGPTSHGCVRLVDAD--AEWIYDWAEPWQTTKGHMGPSSGR 260


>gi|282931884|ref|ZP_06337363.1| NlpC/P60 family protein [Lactobacillus jensenii 208-1]
 gi|281303995|gb|EFA96118.1| NlpC/P60 family protein [Lactobacillus jensenii 208-1]
          Length = 736

 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           Y  +      P +     +LG +   V+   +  RL   G           ++    +AV
Sbjct: 497 YYQVQYNQIQPSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNAV 549

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
           K FQ  HGL+P+G+VD +T 
Sbjct: 550 KNFQASHGLNPTGIVDLATW 569


>gi|83956108|ref|ZP_00964590.1| hypothetical protein NAS141_02906 [Sulfitobacter sp. NAS-14.1]
 gi|83839674|gb|EAP78853.1| hypothetical protein NAS141_02906 [Sulfitobacter sp. NAS-14.1]
          Length = 193

 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 42/126 (33%), Gaps = 14/126 (11%)

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHM-IDEKGKEVFVEEVDWNSPEPPNFIFR--Q 300
           W  P +   +  + + R  P   +    ++   ++                     R   
Sbjct: 63  WTQPNNTAIRYTVGIGR--PGLYEAGEFYVGAKKEWPSWTPTPGMLRREPQKYGPLRNGM 120

Query: 301 DPGKINAMASTKIEF--YSRNNTYM--HDTPEPILFNNVVRFETSGCVRVRN--IIDLDV 354
             G  N + +  +      R +T++  H T +P       R  ++GC R+ N  II L  
Sbjct: 121 PGGLSNPLGARALYLFQPGRGDTFLRVHGTNDPTTIG---RAVSNGCARLVNNQIIQLFN 177

Query: 355 WLLKDT 360
            +  DT
Sbjct: 178 QVPLDT 183


>gi|83814190|ref|YP_444553.1| ErfK/YbiS/YcfS/YnhG family protein [Salinibacter ruber DSM 13855]
 gi|83755584|gb|ABC43697.1| ErfK/YbiS/YcfS/YnhG family [Salinibacter ruber DSM 13855]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 29/112 (25%), Gaps = 9/112 (8%)

Query: 266 LKDNNIHMIDEKGKEVFVE-EVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMH 324
           L    I                ++N  E         PG+   M      F++    ++H
Sbjct: 157 LARWGIVNTGNPDSTATPTGRFNFNWKEKKRVSTMSPPGEEWTM-RWVFNFHAARGIHIH 215

Query: 325 DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRK 376
               P          + GCVR+ +      W+      W          + +
Sbjct: 216 QYSMP-----TGGPTSHGCVRLVDAD--AEWIYDWAEPWQTTKGHMGPSSGR 260


>gi|17549461|ref|NP_522801.1| putative transglycosylase protein [Ralstonia solanacearum GMI1000]
          Length = 390

 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            ++RL++RL   G       +        ++A++ +Q    L   G    S L  +  
Sbjct: 335 DIKRLQQRLADKGY--DPGTIDGLIGDRTQTAIRAYQKDQHLPQDGYASRSLLARLEK 390


>gi|291441824|ref|ZP_06581214.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344719|gb|EFE71675.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 256

 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 108 SVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
             SV   + R+  + G    S  +   +    +SA + FQ   GL   G+V  +T  A
Sbjct: 199 HASVATWQYRMNSAHGY---SLAVDGRYGPGSDSACRSFQSSKGLSVDGIVGPATWGA 253


>gi|239933456|ref|ZP_04690409.1| N-acetylmuramoyl-L-alanine amidase [Streptomyces ghanaensis ATCC
           14672]
          Length = 246

 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 4/58 (6%)

Query: 108 SVSVQRLRERLIIS-GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
             SV   + R+  + G    S  +   +    +SA + FQ   GL   G+V  +T  A
Sbjct: 189 HASVATWQYRMNSAHGY---SLAVDGRYGPGSDSACRSFQSSKGLSVDGIVGPATWGA 243


>gi|319408149|emb|CBI81802.1| peptidoglycan-binding protein [Bartonella schoenbuchensis R1]
          Length = 418

 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L+ RL   GD      +        + A+K FQ+RHGL+ +G
Sbjct: 365 ELQSRLAALGDYKGE--IDGKIGTASKQAIKSFQLRHGLEANG 405


>gi|197105879|ref|YP_002131256.1| hypothetical protein PHZ_c2418 [Phenylobacterium zucineum HLK1]
 gi|196479299|gb|ACG78827.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 213

 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 92  GGWPELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           G  P        LG    +  VQR++  LII G        +    +  + A++ FQ   
Sbjct: 136 GADPSTAAPAERLGQDEITSFVQRVQIALIIKGY--DPGPANGVLSSKTKEALRAFQAAT 193

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL  +G +D  TL A+ V
Sbjct: 194 GLTATGAMDMDTLNALGV 211


>gi|153004608|ref|YP_001378933.1| peptidoglycan binding domain-containing protein [Anaeromyxobacter
           sp. Fw109-5]
 gi|152028181|gb|ABS25949.1| Peptidoglycan-binding domain 1 protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 146

 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 95  PELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P +P  P   L  G    +V+ L+  L   G L      +   D     A++ FQ    L
Sbjct: 62  PRIPASPEALLAPG----AVKDLQRALTDRGLL--GTHRAGELDDATSRAIRRFQESEQL 115

Query: 152 DPSGMVDSSTLEAMNVPVD 170
             +G  D  TL+ + +  D
Sbjct: 116 AATGFPDRETLQRLGLDPD 134


>gi|16126805|ref|NP_421369.1| N-acetylmuramoyl-L-alanine amidase [Caulobacter crescentus CB15]
 gi|221235586|ref|YP_002518023.1| anhydro-N-acetylmuramyl-tripeptide amidase [Caulobacter crescentus
           NA1000]
 gi|13424135|gb|AAK24537.1| N-acetylmuramoyl-L-alanine amidase [Caulobacter crescentus CB15]
 gi|220964759|gb|ACL96115.1| anhydro-N-acetylmuramyl-tripeptide amidase [Caulobacter crescentus
           NA1000]
          Length = 242

 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 90  SRGGWPEL---PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
             G W E    P  PL  G     V  L+  L   G        S  +D +  + V  FQ
Sbjct: 157 GHGLWIEPAPSPGAPLGQGEEGTGVFALQAGLTRLGY---DCAPSGKYDEWTATVVSAFQ 213

Query: 147 MRHGLDP--SGMVDSSTLEAM 165
            RH L     G+ D  T   +
Sbjct: 214 -RHWLQSRFDGIADGETRARL 233


>gi|159901130|ref|YP_001547377.1| ErfK/YbiS/YcfS/YnhG family protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894169|gb|ABX07249.1| ErfK/YbiS/YcfS/YnhG family protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 370

 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 9/54 (16%)

Query: 309 ASTKIEFYSRNNTY------MHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             T +     +  Y      +H T    LF +  R  + GCV +   +D   WL
Sbjct: 306 GETWVVPNVPHAMYFNGSVALHGTYWHNLFGSGTR-ISHGCVNL--PLDAAAWL 356


>gi|260434937|ref|ZP_05788907.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Synechococcus sp. WH 8109]
 gi|260412811|gb|EEX06107.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Synechococcus sp. WH 8109]
          Length = 55

 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 3/57 (5%)

Query: 315 FYSRNNTYMHDTPEPILFNNVVR-FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             +     +H TP             + GCVR+   +    WL  +TP  +   ++ 
Sbjct: 1   MSANEAICLHATPWQENTGKPFGVPRSHGCVRM--PMKHARWLFHNTPKGTPITMQA 55


>gi|312197181|ref|YP_004017242.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311228517|gb|ADP81372.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 251

 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 17/95 (17%)

Query: 73  ETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKG--- 129
           +     ++ I    D+ + G +P++             V  L+  L I    +  +    
Sbjct: 159 QVFPTVQQGI---HDLGATGTFPDIA---------HP-VGTLQNALNIVNHKEAPQPGAL 205

Query: 130 -LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                F     +AV+ FQ    L    +V   T  
Sbjct: 206 SPDGVFGGMTANAVRAFQTAESLAADSVVGQRTWA 240


>gi|124514746|gb|EAY56258.1| protein of unknown function [Leptospirillum rubarum]
 gi|206602459|gb|EDZ38940.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 117

 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V ++++ L+  G           F      A+  FQ  H L  +G VD++T +A+ 
Sbjct: 64  VMKVQKALVAKG---AKIKADGFFGPMTRKAIMAFQKTHKLKVTGHVDAATKKALG 116


>gi|163732765|ref|ZP_02140210.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161394125|gb|EDQ18449.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 196

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 16/135 (11%)

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R+          ++   +  YW +P     +  + + R     L ++         KE  
Sbjct: 45  RLRNDLEPFEIHVDPGQYALYWTLPDKKAIRYAVGIGRTQ---LYEHG-EFFVGAKKEWP 100

Query: 283 -----VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN----TYMHDTPEPILFN 333
                 E ++ +      F      G  N + S  +  ++ +       +H T +P    
Sbjct: 101 SWTPTPEMIERDPQSYARFADGMPGGINNPLGSRGLYLFTPSRGDTFLRIHGTNDPETIG 160

Query: 334 NVVRFETSGCVRVRN 348
              R  ++GC R+ N
Sbjct: 161 ---RRVSNGCARLIN 172


>gi|152983342|ref|YP_001352705.1| hypothetical protein mma_1015 [Janthinobacterium sp. Marseille]
 gi|151283419|gb|ABR91829.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 199

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              +    +   + A+K FQM  GL  +G + +STL A+ +P 
Sbjct: 155 DGQIDGVMNEDTKIALKRFQMIKGLPETGTMGTSTLNALGLPA 197


>gi|149640756|ref|XP_001508107.1| PREDICTED: similar to membrane-type matrix metalloproteinase 2
           [Ornithorhynchus anatinus]
          Length = 920

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 14/108 (12%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRER--------LIISGDLDPSKGLSVAFDAY--VES 140
            G  P  P R      S+ +V    +R        L + G L           +   + S
Sbjct: 395 DGKCPVGPSRSQSPRASTPTVLATSKRPDTPELSWLRLYGYLPQPSRQMSTMRSAQILAS 454

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIK 184
           A+   Q  +G+  +G++D  T + M  P     D    +++ N+ R +
Sbjct: 455 AISEMQRFYGITVTGVLDEETKDWMKRPRCGVPDQFGVRVKANMRRKR 502


>gi|228984101|ref|ZP_04144287.1| hypothetical protein bthur0001_8130 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228775629|gb|EEM24009.1| hypothetical protein bthur0001_8130 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 746

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 44/141 (31%), Gaps = 16/141 (11%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPI---ISKETIAQTEKAIAFYQDI---LSRGGWPELPI 99
             +    +N            +P     S++       AI + + +    + G +     
Sbjct: 151 RKIQQWLNNKYINRADF--FYMPCDGHYSRDVQKALMFAIQYEEGLKDGTANGYFGPTTQ 208

Query: 100 RPLHL-----GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             +       G++   V   +  LI +            F  ++ + +K FQ    L  +
Sbjct: 209 EKIKPVVLKEGSTGTFVYLFQAALIFNDY---DVPFDGTFSTFMTTQLKQFQKFALLKAT 265

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G+ D  T  ++ V      RQ
Sbjct: 266 GVSDFQTWASLLVSTGDPERQ 286


>gi|254450592|ref|ZP_05064029.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
 gi|198264998|gb|EDY89268.1| ErfK/YbiS/YcfS/YnhG family protein [Octadecabacter antarcticus 238]
          Length = 75

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 6/58 (10%)

Query: 292 EPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             P +     PG  N + +  +        Y +H T +        R  ++GC+ + N
Sbjct: 4   RNPEWPEFVGPGPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RRSSNGCIGLYN 56


>gi|126732715|ref|ZP_01748511.1| peptidoglycan binding domain protein [Sagittula stellata E-37]
 gi|126706845|gb|EBA05915.1| peptidoglycan binding domain protein [Sagittula stellata E-37]
          Length = 466

 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP    RPL    +S   + L+ RL  +G    +KG+          A++ +Q R G
Sbjct: 398 QGSWPR-DNRPL----TSSERKELQTRLTQAGY--DTKGVDGRIGPMTLQAIRGYQRRAG 450

Query: 151 LDPSGMVDSSTLEAMN 166
           L P G      L+ + 
Sbjct: 451 LVPDGYASMELLKKLR 466


>gi|311070871|ref|YP_003975794.1| YbfG protein [Bacillus atrophaeus 1942]
 gi|310871388|gb|ADP34863.1| YbfG [Bacillus atrophaeus 1942]
          Length = 725

 Score = 43.1 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 51/164 (31%), Gaps = 20/164 (12%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIP---IISKET 74
           LI+   L +    +           S    +    +             +P   + +++T
Sbjct: 128 LIMKALLDMSAFRLVPG------GNSRVRQIQQNLNRDYNDYIG----LMPCDGLYARDT 177

Query: 75  IAQTEKAIAFYQDI---LSRGGWPELPIR---PLHLGNSSVS-VQRLRERLIISGDLDPS 127
                 A+   + +   ++ G +          L  G+S    V  ++  L  +G     
Sbjct: 178 NKALIYALQKEEGMSTSVANGFFGNGTTNLCPTLTPGDSRTGFVLIVQYALYCNGKSFDP 237

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
                 +   V SAVK FQ    L  +G  D  T++A+      
Sbjct: 238 GEFDGKYGVGVVSAVKAFQEFMCLPQTGYADMPTIKALLSSSGD 281



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 11/132 (8%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-------- 164
           L+  L   G      G +  F    E+AVK FQ   GL    G+V +  ++A        
Sbjct: 83  LQGALWCKGF--SPGGFTGVFFEQTENAVKKFQKAAGLTTQDGVVTALIMKALLDMSAFR 140

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
           +    + R+RQ+Q NL R        M    +       +L      + G+ ++V  G  
Sbjct: 141 LVPGGNSRVRQIQQNLNRDYNDYIGLMPCDGLYARDTNKALIYALQKEEGMSTSVANGFF 200

Query: 225 DRQTPILHSRIN 236
              T  L   + 
Sbjct: 201 GNGTTNLCPTLT 212


>gi|145297589|ref|YP_001140430.1| general secretion pathway protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850361|gb|ABO88682.1| general secretion pathway protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 547

 Score = 43.1 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 40  INESYHSIVNDRFDNFLARVDMGIDSDIP-----IISKETIAQTEKAIAFYQDILSRGGW 94
           +    H  +    D         + S  P     +I  ++     + ++ +        W
Sbjct: 377 LQPLQHPALISLTDETGGIYYATLVSLGPDKANLLIGNQSWQVDRQWLSDFWGGSYTLLW 436

Query: 95  PELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
                    +GN++    VQ L   L  +  L         FDA +++ ++ FQ   GL+
Sbjct: 437 RMPKGGVALIGNNAGATQVQWLDNALSRA--LQQPDRKVRRFDAELKNKLQQFQREQGLN 494

Query: 153 PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           P G+  S+TL  +NV     + +L+    R     +        +V +
Sbjct: 495 PDGIAGSNTLLRLNVMAGEPMPRLEDESKRTGTPAKLDAMDDESMVTL 542


>gi|150397314|ref|YP_001327781.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
 gi|150028829|gb|ABR60946.1| lytic murein transglycosylase [Sinorhizobium medicae WSM419]
          Length = 405

 Score = 43.1 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 42/147 (28%), Gaps = 13/147 (8%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
              +G++  +     S L+  +                  + +  +      +      T
Sbjct: 272 WFALGVTPRDGNTSNSALEASLVLPQGRKGAAFLTYPNFNIYLEWNQSFIYTTSAAYFAT 331

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             A           G P         G     ++ L+ RL   G       +     +  
Sbjct: 332 RLA-----------GAPPYQQGNPEPGLGDAEMKALQTRLQALGH--DVGKIDGILGSGT 378

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +A++  Q++ GL   G    + LEA+
Sbjct: 379 RAALQKEQLKLGLPADGWATQNLLEAL 405


>gi|295445967|gb|ADG21911.1| amidase [Alcaligenes sp. WRB10]
          Length = 254

 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 10/101 (9%)

Query: 17  YLILPMGLSLVEKPIHASVLDEIINESYHS---IVNDRFDNFLARVDMGIDSDIPIISKE 73
           YL     + +       S     +     S         D    ++   +    P   + 
Sbjct: 160 YLHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQQALDK--GQLPTFVAGLAPQHPQ- 216

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIR-PLHLGNSSVSVQR 113
             A   +++     +     WP+L  +  L  G  S  V  
Sbjct: 217 -YAVMHESLLAL--LSDTKPWPQLTGKATLRPGQWSNDVPA 254


>gi|163867469|ref|YP_001608668.1| peptidoglycan-binding protein [Bartonella tribocorum CIP 105476]
 gi|161017115|emb|CAK00673.1| peptidoglycan-binding protein [Bartonella tribocorum CIP 105476]
          Length = 418

 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + L+ RL   G    +  +          A+K FQ+ HGL  +G
Sbjct: 364 KELQSRLSALGYYKGN--VDGKIGTASRKAIKAFQLHHGLKANG 405


>gi|114704914|ref|ZP_01437822.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
 gi|114539699|gb|EAU42819.1| hypothetical protein FP2506_08256 [Fulvimarina pelagi HTCC2506]
          Length = 1293

 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  L   G    +            +A+K FQ   GL  +G +D + + A+
Sbjct: 1234 AIRNIQAILGNLGY--DAGPPDGVIGDLTRTAIKDFQSDAGLASTGEIDEALIRAL 1287


>gi|322383009|ref|ZP_08056839.1| PDZ-containing carboxyl-terminal protease processing protease-like
           protein [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153032|gb|EFX45492.1| PDZ-containing carboxyl-terminal protease processing protease-like
           protein [Paenibacillus larvae subsp. larvae B-3650]
          Length = 467

 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L    +   ++  +  L  +G           F A  E +VK FQ   GL  S
Sbjct: 374 PLSKKSVLKRDENGEDIKNAQLMLTAAGF--KPDRTDGYFSAATEESVKAFQKAKGLTVS 431

Query: 155 GMVD--------SSTLEAMNVPVDLRIRQLQV 178
           G +D         +T+EA+  P +    Q  +
Sbjct: 432 GQIDENTASKLERATIEAIKDPANDTQLQAAL 463


>gi|167463457|ref|ZP_02328546.1| Putative protease [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 481

 Score = 43.1 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 10/92 (10%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P      L    +   ++  +  L  +G           F A  E +VK FQ   GL  S
Sbjct: 388 PLSKKSVLKRDENGEDIKNAQLMLTAAGF--KPDRTDGYFSAATEESVKAFQKAKGLTVS 445

Query: 155 GMVD--------SSTLEAMNVPVDLRIRQLQV 178
           G +D         +T+EA+  P +    Q  +
Sbjct: 446 GQIDENTASKLERATIEAIKDPANDTQLQAAL 477


>gi|293604157|ref|ZP_06686565.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
 gi|292817382|gb|EFF76455.1| type III effector HopAJ2 [Achromobacter piechaudii ATCC 43553]
          Length = 411

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 21/69 (30%), Gaps = 2/69 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + L+  LI  G             A    A+K  Q   GL   G      L+
Sbjct: 345 PGLSRAERRELQSLLIAKGY--EVGEPDGMVGARTRQALKAAQESLGLPADGRAGQKALQ 402

Query: 164 AMNVPVDLR 172
           A+      R
Sbjct: 403 ALRASSAPR 411


>gi|254468530|ref|ZP_05081936.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
 gi|207087340|gb|EDZ64623.1| ErfK/YbiS/YcfS/YnhG [beta proteobacterium KB13]
          Length = 155

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 5/38 (13%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            Y+H T +     +     + GC+R++N  +I L   +
Sbjct: 111 IYIHGTHDEENIGHP---VSHGCIRMKNKDVISLFDLV 145


>gi|207724810|ref|YP_002255207.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum MolK2]
 gi|206590035|emb|CAQ36996.1| membrane-bound lytic murein transglycosylase b protein [Ralstonia
           solanacearum MolK2]
          Length = 390

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +QRL+++L   G       +        + A++ +Q  H L   G    S L  +  
Sbjct: 334 ADIQRLQQKLTDRGY--DPGTIDGIIGDRTQQAIRAYQKDHQLPQDGYASRSLLARLEQ 390


>gi|91775566|ref|YP_545322.1| lytic murein transglycosylase [Methylobacillus flagellatus KT]
 gi|91709553|gb|ABE49481.1| Lytic murein transglycosylase [Methylobacillus flagellatus KT]
          Length = 417

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            +V+RL+++L   G    + G         ++A++ +Q  H L   G    S L+ +   
Sbjct: 341 DAVKRLQQQLTELGF--DTGGSDGLPGPRTQAAIRGYQFAHALPADGYASPSLLQHVATT 398

Query: 169 VDLRIR 174
           +  +  
Sbjct: 399 LASQAE 404


>gi|46205977|ref|ZP_00210118.1| COG2951: Membrane-bound lytic murein transglycosylase B
           [Magnetospirillum magnetotacticum MS-1]
          Length = 167

 Score = 43.1 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L+ RL   G      G          +A++ FQ   GL P G  D+  L+ +    + 
Sbjct: 110 LQTRLAGLGY--AVGGADGKVGPKTRAAIRAFQTATGLVPDGYADAGLLDRIRATGEA 165


>gi|294812816|ref|ZP_06771459.1| Membrane protein [Streptomyces clavuligerus ATCC 27064]
 gi|294325415|gb|EFG07058.1| Membrane protein [Streptomyces clavuligerus ATCC 27064]
          Length = 542

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G  S SV RL ERL   G                D     A +  Q   G +  G  
Sbjct: 411 FRPGAVSPSVTRLGERLRQLGYGRHYTSGPGPDWGEADRRNVEAFQRAQGWSGTEADGYP 470

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 471 GPHTWRRL 478


>gi|285018691|ref|YP_003376402.1| lytic murein transglycosylase precursor transmembrane protein
           [Xanthomonas albilineans GPE PC73]
 gi|283473909|emb|CBA16410.1| probable lytic murein transglycosylase precursor transmembrane
           protein [Xanthomonas albilineans]
          Length = 425

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +  L++RL   G       +          A++ FQ    L   G   +S L  +  
Sbjct: 368 AEITELQKRLNEKGF--DVGSVDGTLGPRTRQAIRAFQRSQQLPQDGYASTSLLARLRA 424


>gi|163735687|ref|ZP_02143118.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161391115|gb|EDQ15453.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 190

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 5/84 (5%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMH 324
           L       + EK +              P +      G   N + +  +    +    +H
Sbjct: 92  LTRLGYTEVVEKRENPSWAPTPSMRERNPEWPAVIPGGDPANPLGTRALYLSWQY-YRIH 150

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GC+ + N
Sbjct: 151 GTQDTRKIG---RRSSNGCIGLYN 171


>gi|260576429|ref|ZP_05844419.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
 gi|259021312|gb|EEW24618.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sp. SW2]
          Length = 238

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 45/195 (23%)

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV 224
             +    R    + N  R+         +  V+V+  A  L  V   +  LR  + VG  
Sbjct: 45  FAMAAVPRAYLTERN-RRVTVAYTGPEPVGTVVVDPYARYLYLVTGPQRALRYGIAVGEQ 103

Query: 225 DRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVE 284
            R      + + R    P W    ++I+         +P+                    
Sbjct: 104 GRN-FSGSAVVRRKQHWPSWTPTPNMIRT--------NPELYA----------------- 137

Query: 285 EVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETS 341
                      +      G  N M +  +      R+  Y +H T E             
Sbjct: 138 ----------PYARGLPGGPPNPMGARALYLYQGGRDTFYRIHGTQESSAVGKATVA--- 184

Query: 342 GCVRV--RNIIDLDV 354
           GC+R+  ++ IDL  
Sbjct: 185 GCIRLFNQDAIDLFD 199


>gi|221640695|ref|YP_002526957.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides KD131]
 gi|332559673|ref|ZP_08413995.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides WS8N]
 gi|221161476|gb|ACM02456.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|332277385|gb|EGJ22700.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides WS8N]
          Length = 176

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 48/170 (28%)

Query: 183 IKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +        +    VLV+I + +L    E+G+  L     V   D  T    + + + + 
Sbjct: 32  LDWQPYFSNLRNGAVLVDITSRALHFWSEDGQTYLLFPTSVPLSDDLTRRGRTEVVQKVV 91

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++ +        ++P++                                   
Sbjct: 92  APPWRPTPAMKE--------RNPEW-------------------------------PDMV 112

Query: 301 DPG-KINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             G   N + +  +        Y +H T +        R  ++GC+ + N
Sbjct: 113 PGGAPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RKSSNGCIGLYN 157


>gi|163761303|ref|ZP_02168378.1| putative hemagglutinin protein [Hoeflea phototrophica DFL-43]
 gi|162281460|gb|EDQ31756.1| putative hemagglutinin protein [Hoeflea phototrophica DFL-43]
          Length = 1297

 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 41/117 (35%), Gaps = 9/117 (7%)

Query: 49   NDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSS 108
            ++ F+             +   + + I     A+   +   + GG            +  
Sbjct: 1185 DEVFNALRPEQAEAAREAVANWTAQPINAEANAV---EIPAAWGGDSTETASV----DMG 1237

Query: 109  VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             +++ ++  L  +G    +            +A+K FQ   G++P+G +D   ++ +
Sbjct: 1238 KAIRNIQAILNNNGF--DAGAPDGVMGKRTVAAIKAFQSSIGMEPTGEIDDRLVKEL 1292


>gi|326441234|ref|ZP_08215968.1| hypothetical protein SclaA2_09211 [Streptomyces clavuligerus ATCC
           27064]
          Length = 525

 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              G  S SV RL ERL   G                D     A +  Q   G +  G  
Sbjct: 394 FRPGAVSPSVTRLGERLRQLGYGRHYTSGPGPDWGEADRRNVEAFQRAQGWSGTEADGYP 453

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 454 GPHTWRRL 461


>gi|299133806|ref|ZP_07027000.1| lytic murein transglycosylase [Afipia sp. 1NLS2]
 gi|298591642|gb|EFI51843.1| lytic murein transglycosylase [Afipia sp. 1NLS2]
          Length = 407

 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             +Q ++ RL  +G    + G           AVK FQ + GL   G    + L  + 
Sbjct: 350 AEIQEVQTRLTRAGF--NTGGTDGRVGNDTMKAVKDFQTKVGLPADGYAGLTVLARLR 405


>gi|212638261|ref|YP_002314781.1| N-acetylmuramoyl-L-alanine amidase fused to LysM and peptidoglycan
           binding domain [Anoxybacillus flavithermus WK1]
 gi|212559741|gb|ACJ32796.1| N-acetylmuramoyl-L-alanine amidase fused to LysM and peptidoglycan
           binding domain [Anoxybacillus flavithermus WK1]
          Length = 396

 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPS 154
           +LP + L  G+    V+ L++ L               F      AVK   +   G + +
Sbjct: 319 KLPNKVLRYGDRGEDVRILQQALNEIHF--KCGEEDGVFGKKTLDAVKRVNLMFSGGNKN 376

Query: 155 GMVDSSTLEAMNVPVDLRIR 174
           G+ D  T   +   +  +++
Sbjct: 377 GIYDEKTKNYIISKLKEKMK 396


>gi|153955852|ref|YP_001396617.1| glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219856212|ref|YP_002473334.1| hypothetical protein CKR_2869 [Clostridium kluyveri NBRC 12016]
 gi|146348710|gb|EDK35246.1| Predicted glycosyl hydrolase [Clostridium kluyveri DSM 555]
 gi|219569936|dbj|BAH07920.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 306

 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 21/59 (35%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           G+ S  V  ++++L     L  +    + +D     AV   Q        G++   T  
Sbjct: 243 GHKSHVVLWIQQKLEQYEYLKENSYTQMLYDEPTFQAVTELQKNWERPTDGVLKIETWN 301


>gi|298290683|ref|YP_003692622.1| peptidoglycan-binding protein [Starkeya novella DSM 506]
 gi|296927194|gb|ADH88003.1| Peptidoglycan-binding domain 1 protein [Starkeya novella DSM 506]
          Length = 225

 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 4/71 (5%)

Query: 99  IRPLHLGNS--SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
              L  G    S  +  +++ L   G       +        + A++ F+    L  +G 
Sbjct: 150 ASLLPPGEVPVSPRIVEIQKALARLGY--GPLRVDGRTGEATKQAIERFERDRRLPVTGD 207

Query: 157 VDSSTLEAMNV 167
           V    +  +N 
Sbjct: 208 VSDRLIRELNA 218


>gi|326314908|ref|YP_004232580.1| peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323371744|gb|ADX44013.1| Peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 346

 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  + RL   G                 + ++ FQ   GL  +G +DS+T +A++ 
Sbjct: 292 VREAQARLNALGY--DVGAPDGGMGPKTTNGLRAFQKDKGLPVTGRLDSATTDALSR 346


>gi|326315762|ref|YP_004233434.1| peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372598|gb|ADX44867.1| Peptidoglycan-binding domain 1 protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 356

 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  + RL   G                 + ++ FQ   GL  +G +DS+T +A++ 
Sbjct: 302 VREAQARLNALGY--DVGAPDGGMGPKTTNGLRAFQKDKGLPVTGRLDSATTDALSR 356


>gi|225452580|ref|XP_002280833.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147807820|emb|CAN73129.1| hypothetical protein VITISV_030257 [Vitis vinifera]
          Length = 319

 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY------VESAVKLFQMRHGLDPSGMVD 158
           G+    +Q+L++ L   G L  S+  +            +ESA+K +Q  + L+ +G +D
Sbjct: 52  GDEVNGIQKLKKYLEQFGYLSYSRSKNQTHADDDDFDDLLESAIKTYQANYHLEATGDLD 111

Query: 159 SSTLEAMNVP 168
           S T+  M  P
Sbjct: 112 SETVSEMVKP 121


>gi|22218341|ref|NP_671724.1| matrix metalloproteinase-21 preproprotein [Homo sapiens]
 gi|317373390|sp|Q8N119|MMP21_HUMAN RecName: Full=Matrix metalloproteinase-21; Short=MMP-21; Flags:
           Precursor
 gi|22134532|gb|AAM92903.1|AF331526_1 putative matrix metalloproteinase [Homo sapiens]
 gi|55661689|emb|CAH73211.1| matrix metallopeptidase 21 [Homo sapiens]
 gi|55959618|emb|CAI12086.1| matrix metallopeptidase 21 [Homo sapiens]
 gi|162318546|gb|AAI56369.1| Matrix metallopeptidase 21 [synthetic construct]
 gi|225000648|gb|AAI72493.1| Matrix metallopeptidase 21 [synthetic construct]
          Length = 569

 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 29/143 (20%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L       ++L   +   + +     F +             P+   + IA    A    
Sbjct: 2   LAASIFRPTLLLCWLAAPWPTQPESLFHSRDRSDLEP----SPLRQAKPIADLHAA---- 53

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q  LSR GW  +                        G        +    A +  AV+ F
Sbjct: 54  QRFLSRYGWSGVWA--------------------AWGPSPEGPPETPK-GAALAEAVRRF 92

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  + L  SG +D++TL AMN P
Sbjct: 93  QRANALPASGELDAATLAAMNRP 115


>gi|304409318|ref|ZP_07390938.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS183]
 gi|307303676|ref|ZP_07583429.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica BA175]
 gi|304351836|gb|EFM16234.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS183]
 gi|306912574|gb|EFN42997.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica BA175]
          Length = 557

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            +      FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N  R
Sbjct: 500 RNARRVNQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGAR 556


>gi|288916296|ref|ZP_06410675.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288352275|gb|EFC86473.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 263

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 27/94 (28%), Gaps = 22/94 (23%)

Query: 87  DILSRGGWPELP-------------IRPLHLGNSSVS------VQRLRERLIISGDLDPS 127
            ++    W  +                 L  G           V  ++ RLI        
Sbjct: 168 GLIDASKWGSVAPASTGATYDEPPMAYTLWEGAKDPVQGKYSFVHWVQARLI---HHTLR 224

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
             +   F A    AVK FQ+  GL P G+    T
Sbjct: 225 ITVDGDFGAKTTEAVKTFQVSRGLKPDGVFGPVT 258


>gi|217974314|ref|YP_002359065.1| peptidoglycan-binding domain 1 protein [Shewanella baltica OS223]
 gi|217499449|gb|ACK47642.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS223]
          Length = 557

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
            +      FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N  R
Sbjct: 500 RNARRVNQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGAR 556


>gi|281357530|ref|ZP_06244018.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281316133|gb|EFB00159.1| ErfK/YbiS/YcfS/YnhG family protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 422

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 66/214 (30%), Gaps = 57/214 (26%)

Query: 161 TLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE----NGKVGLR 216
           T++A+ +   +    L  N++ + K L    G   + V   A  L+        G++   
Sbjct: 258 TIDAIKISSRMP---LANNILPLGKRLVIYPGPWKIKVEKSARLLKLYNEFPAGGRLYAV 314

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
             + +GR+ R TP     I+  + NP W  P             +  +Y    N+     
Sbjct: 315 FDIGIGRLGR-TPSADFVISTKLKNPDWYTPEG-----------RVIKYGDPENML---- 358

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPG--KINAMASTKIEFYSRNNTYMHDTPEPILFNN 334
                             ++  +  P       +              +H T +      
Sbjct: 359 -----------------GDYFLKLAPTGTPDKPL----------LGYGIHGTRDDASVTK 391

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
                ++GC+R+ N       L +  P+ +   I
Sbjct: 392 SQ---SNGCIRMHNAD--VETLYRIVPSRTPVEI 420


>gi|21693575|gb|AAM75352.1|AF520613_1 matrix metalloproteinase-21 [Homo sapiens]
 gi|21928002|gb|AAM78033.1| MMP21 protein [Homo sapiens]
 gi|58003496|gb|AAW62254.1| matrix metalloproteinase 21 [Homo sapiens]
          Length = 569

 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 29/143 (20%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L       ++L   +   + +     F +             P+   + IA    A    
Sbjct: 2   LAASIFRPTLLLCWLAAPWPTQPESLFHSRDRSDLEP----SPLRQAKPIADLHAA---- 53

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q  LSR GW  +                        G        +    A +  AV+ F
Sbjct: 54  QRFLSRYGWSGVWA--------------------AWGPSPEGPPETPK-GAALAEAVRRF 92

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  + L  SG +D++TL AMN P
Sbjct: 93  QRANALPASGELDAATLAAMNRP 115


>gi|312880800|ref|ZP_07740600.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
           12260]
 gi|310784091|gb|EFQ24489.1| ErfK/YbiS/YcfS/YnhG family protein [Aminomonas paucivorans DSM
           12260]
          Length = 156

 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 43/172 (25%), Gaps = 61/172 (35%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG--------RVDRQTPILHSRINRIM 239
            +  G  ++ +      L       V     V +G        R DR+TP     + RI 
Sbjct: 19  AEPAGEVWLKIEKGQHRLVVFRGQAVWDAFPVALGSNPGQKQRRGDRRTPEGEFSVVRIQ 78

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            +  W                              D KG+                    
Sbjct: 79  DSRAWTH-------------------------DFRDGKGEI------------------- 94

Query: 300 QDPGKINAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
             PG   A     I   +      +H T +P          T GC+R+RN  
Sbjct: 95  --PG---AYGPWFIRLKTGWDGIGIHGTHDPSSVGKD---VTEGCIRLRNAD 138


>gi|160874352|ref|YP_001553668.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS195]
 gi|160859874|gb|ABX48408.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS195]
 gi|315266587|gb|ADT93440.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS678]
          Length = 557

 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N  R
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGAR 556


>gi|157278505|ref|NP_001098354.1| membrane-type matrix metalloproteinase [Oryzias latipes]
 gi|46359591|dbj|BAD15298.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 607

 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L + G L P+        +   ++SA+   Q R+GL+ +G +DS+T+E M  P
Sbjct: 45  LQMYGYLPPADPRMAVLRSAKVMQSAIAAMQRRYGLNVTGTLDSNTIEWMRQP 97


>gi|126173395|ref|YP_001049544.1| peptidoglycan binding domain-containing protein [Shewanella baltica
           OS155]
 gi|125996600|gb|ABN60675.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS155]
          Length = 557

 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N  R
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGAR 556


>gi|85707010|ref|ZP_01038099.1| hypothetical protein ROS217_03105 [Roseovarius sp. 217]
 gi|85668451|gb|EAQ23323.1| hypothetical protein ROS217_03105 [Roseovarius sp. 217]
          Length = 191

 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 63/209 (30%), Gaps = 47/209 (22%)

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIP-AA 203
           + R  L  +G V +  L +  V   + + +  +    + +++    G   Y +   P   
Sbjct: 2   KRRKFLFATGAVGA--LCSQPVSAHVVLPKYDLPPEYLPQVVSIPGGADPYEIHVFPSQF 59

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
           +L   +     +R TV +GR           +      P W     +++++         
Sbjct: 60  ALFWTQPDNTAIRYTVGIGRPSLY-EAGEFYVGAKKEWPSWTPTPGMLRREP-------- 110

Query: 264 QYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNT 321
                                       +          G  N + +  +      R +T
Sbjct: 111 ---------------------------QKYGPLRNGMPGGLSNPLGARALYLFQPGRGDT 143

Query: 322 YM--HDTPEPILFNNVVRFETSGCVRVRN 348
           ++  H T +P       R  ++GC R+ N
Sbjct: 144 FLRVHGTNDPTTIG---RAVSNGCARLVN 169


>gi|194015385|ref|ZP_03054001.1| S41A subfamily peptidase [Bacillus pumilus ATCC 7061]
 gi|194012789|gb|EDW22355.1| S41A subfamily peptidase [Bacillus pumilus ATCC 7061]
          Length = 482

 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL L  ++  V++ +  L   G       +   FD   + AV  FQ  + LD SG++D
Sbjct: 390 KEPLQLDMNNEEVRQAQTLLK--GLSFDPGRVDGYFDEETKKAVLAFQSTYNLDKSGVID 447

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            +T + MN  VD  ++  + N ++++ 
Sbjct: 448 LNTAKMMNKMVDE-VKSYEKNDLQLQT 473


>gi|222087083|ref|YP_002545618.1| membrane-bound lytic murein transglycosylase protein [Agrobacterium
           radiobacter K84]
 gi|221724531|gb|ACM27687.1| membrane-bound lytic murein transglycosylase protein [Agrobacterium
           radiobacter K84]
          Length = 407

 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            +   GG    WP  P   L +         L+ RL   G  D    +   F +  ++A+
Sbjct: 330 QLAGYGGMQQSWPR-PSGTLDVKQK----FELQTRLKELGYYD--GVVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+D  G    S L A+  
Sbjct: 383 AAVQQRIGMDADGEPSMSLLNALRK 407


>gi|254488538|ref|ZP_05101743.1| peptidoglycan-binding domain 1 protein [Roseobacter sp. GAI101]
 gi|214045407|gb|EEB86045.1| peptidoglycan-binding domain 1 protein [Roseobacter sp. GAI101]
          Length = 496

 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG +      L+ RL+  G    S      F +    AV  +Q R G   +G + +  + 
Sbjct: 431 LGLTRAERVDLQRRLVRLGY--KSSPTDGIFSSETRRAVAEWQAREGETATGYLTADQVR 488

Query: 164 AMNV 167
            + V
Sbjct: 489 LIRV 492


>gi|157374224|ref|YP_001472824.1| peptidoglycan binding domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316598|gb|ABV35696.1| peptidoglycan-binding domain 1 protein [Shewanella sediminis
           HAW-EB3]
          Length = 541

 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 94  WPELPIRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W     +P  +G  +    +Q L   L    +  P       FD+ +E  +K FQ  HGL
Sbjct: 448 WQAPSDQPREIGQGANPAQIQWLENSLAHIDNTVPRLV--NRFDSQLEEQLKRFQREHGL 505

Query: 152 DPSGMVDSSTLEAMN 166
               +  S TL  +N
Sbjct: 506 RADAIAGSQTLVQLN 520


>gi|302383894|ref|YP_003819717.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302194522|gb|ADL02094.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 253

 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 20/66 (30%), Gaps = 4/66 (6%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMV 157
             PL +G+  + V  L+  L   G           +       V+ FQ         G+ 
Sbjct: 172 GPPLTIGDEGLGVHVLQAGLHRLGY---EPLPDGRYTDETRITVEAFQRHWRPSKVDGIA 228

Query: 158 DSSTLE 163
           D  T  
Sbjct: 229 DGETRA 234


>gi|332969801|gb|EGK08812.1| type III effector HopAJ2 [Psychrobacter sp. 1501(2011)]
          Length = 466

 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 9/110 (8%)

Query: 75  IAQTEKAIAFYQDILS-RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           IA   + I      +     WP         G S    + ++E L + G           
Sbjct: 307 IAHLSQQIEKKDTHVDFATPWPTDD-----PGLSRKESRDVQEALNLLGY--DIGEADGI 359

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSS-TLEAMNVPVDLRIRQLQVNLMR 182
                  A++ +Q  +GL+P G          M+   +L+  Q + +   
Sbjct: 360 IGDDTRRAIQKYQADNGLEPDGKAGKKIHQHLMDKSAELKQAQSEQSTED 409


>gi|16901508|gb|AAL27029.1| matrix metalloproteinase MMP2 [Glycine max]
          Length = 357

 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE-SAVKLFQMRHGLDPSGMVDSSTLEAM 165
           S+  V  +++ L   G ++ S  LS + D     SA+K +Q  + L P+G +++ TL+ M
Sbjct: 74  SAPPVSLIKDYLSNYGYIESSGPLSNSMDQETIISAIKTYQQYYCLQPTGKLNNETLQQM 133

Query: 166 N-VPVDLRIRQLQVNLMRI---------KKLLEQKMGLRYV-LVNIPAASLEAVEN 210
           + +   +    +  N             +      +   ++    IPA   +   +
Sbjct: 134 SFLRCGVPDINIDYNFTDDNMSYPKAGHRWFPHTNLTYGFLPENQIPANMTKVFRD 189


>gi|255263712|ref|ZP_05343054.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62]
 gi|255106047|gb|EET48721.1| ErfK/YbiS/YcfS/YnhG family protein [Thalassiobium sp. R2A62]
          Length = 193

 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 6/68 (8%)

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFET 340
                       P +     PG  N + S  +        Y +H T +        R  +
Sbjct: 112 SWRPTPAMRKRNPEWPEFVGPGPDNPLGSHALYLS--WTYYRIHGTHDTRKIG---RRSS 166

Query: 341 SGCVRVRN 348
           +GC+ + N
Sbjct: 167 NGCIGLYN 174


>gi|182415294|ref|YP_001820360.1| ErfK/YbiS/YcfS/YnhG family protein [Opitutus terrae PB90-1]
 gi|177842508|gb|ACB76760.1| ErfK/YbiS/YcfS/YnhG family protein [Opitutus terrae PB90-1]
          Length = 156

 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 52/172 (30%), Gaps = 28/172 (16%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH----SRINRIMFNPYWVIPRSI 250
            ++V I   +L+    G +     V   R             + ++ I        P  +
Sbjct: 1   MLVVRIGTGTLQFYRAGVMVRSYAVSTSRRPSSNIKGSLGTPTGLHEIAERIGAGQPPGM 60

Query: 251 IQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAS 310
           + K  +   R   ++ +          G+ +    + W              G++++   
Sbjct: 61  VFKSRIPTGRHFSEFAESE------AAGQLIT-SRILWLR---GLEPGVNRGGEVDS--- 107

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                      Y+H T         +   ++GC+ +RN  +I+L   +    
Sbjct: 108 ------YDRYIYVHGTNHEDRIGEPM---SAGCIEMRNMDVIELFEEVRAGD 150


>gi|120556504|ref|YP_960855.1| lytic murein transglycosylase [Marinobacter aquaeolei VT8]
 gi|120326353|gb|ABM20668.1| lytic murein transglycosylase [Marinobacter aquaeolei VT8]
          Length = 410

 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V  L++ L   G   PS        +    A++ +Q   GL   G      L A+ V
Sbjct: 351 QVLELQQALNDKGY--PSGEPDGILGSNTRKAIRAYQKAEGLVADGFPSEQVLAALGV 406


>gi|332968027|gb|EGK07114.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 147

 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)

Query: 105 GNSSVSVQRLRERLIISG-DLDPSKGLSVAFDAYVESAVKLFQMRHG---LDPSGMVDSS 160
           G S  +V  + +RL+  G D     G    F       V+ FQ   G    D  G     
Sbjct: 74  GKSHPAVTLMGKRLVAHGFDKHYKVGPGPTFSEADRKNVQDFQKAQGWTGSDADGYPGPE 133

Query: 161 TLEAMNVPVD 170
           T + +   V 
Sbjct: 134 TWKRLMATVK 143


>gi|159037243|ref|YP_001536496.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157916078|gb|ABV97505.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
          Length = 270

 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 14/46 (30%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                G    +       +K FQ   GL   G++   T +A     
Sbjct: 223 YLRKAGHDGRYGPEHRELIKAFQTDQGLSRDGLLGRKTWDAAYRNP 268


>gi|160879586|ref|YP_001558554.1| peptidoglycan binding domain-containing protein [Clostridium
           phytofermentans ISDg]
 gi|160428252|gb|ABX41815.1| Peptidoglycan-binding domain 1 protein [Clostridium phytofermentans
           ISDg]
          Length = 275

 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ ++E+L  +G           F +  +S V+ FQ  + L   G    +TL  ++ 
Sbjct: 33  DGVKTMQEKLNKAGY--NCGTADGKFGSTTDSKVRSFQTANSLTVDGCAGKNTLTKLDA 89


>gi|23010179|ref|ZP_00050958.1| COG1376: Uncharacterized protein conserved in bacteria
           [Magnetospirillum magnetotacticum MS-1]
          Length = 192

 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 12/78 (15%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T +      + R  + GCVR+  RN   L   + +
Sbjct: 74  FSREWDNAPMPHAIFFTQVGHAIHGTTQTR---RLGRAASHGCVRLSQRNAATLFALVKQ 130

Query: 359 DTPTWSRYHIEEVVKTRK 376
            T   +R  IE   +  +
Sbjct: 131 QTMARTRVVIEGSGEAGE 148


>gi|39933165|ref|NP_945441.1| peptidoglycan-binding domain 1 [Rhodopseudomonas palustris CGA009]
 gi|39652790|emb|CAE25529.1| unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 447

 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
             + L  G+     Q ++  L  +GD   +  ++      + +A+K FQ   G  P+G++
Sbjct: 42  TAKTLAQGDR----QAIQSDLAWTGDY--NGLINGEVSDRMIAAIKQFQTNQGHKPTGVL 95

Query: 158 DSS 160
           +  
Sbjct: 96  NPQ 98


>gi|222874548|gb|EEF11679.1| predicted protein [Populus trichocarpa]
          Length = 238

 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +++L   G    +     +     ++A++ FQ    L  +G +D +T +A+  
Sbjct: 187 QQKLNALGY--TAGTPDGSMGKNTQNALREFQRDQSLPQTGRLDRATSQALQQ 237


>gi|160895502|ref|YP_001561084.1| peptidoglycan-binding domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160361086|gb|ABX32699.1| Peptidoglycan-binding domain 1 protein [Delftia acidovorans SPH-1]
          Length = 344

 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +++L   G    +     +     ++A++ FQ    L  +G +D +T +A+  
Sbjct: 293 QQKLNALGY--TAGTPDGSMGKNTQNALREFQRDQSLPQTGRLDRATSQALQQ 343


>gi|332519371|ref|ZP_08395838.1| Peptidoglycan-binding domain 1 protein [Lacinutrix algicola
           5H-3-7-4]
 gi|332045219|gb|EGI81412.1| Peptidoglycan-binding domain 1 protein [Lacinutrix algicola
           5H-3-7-4]
          Length = 219

 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            LP + L+ G  S  +  +++ L+  G    +  +   ++    +A++ F+ ++ L P G
Sbjct: 151 MLPQKALYFGEKSAFIFEMQKLLLAKGY---NIPVDGVYEKKTSNALQAFETKNNLYPDG 207

Query: 156 MVDSSTLE 163
            +D  +L 
Sbjct: 208 KIDKMSLN 215


>gi|328544294|ref|YP_004304403.1| Lytic murein transglycosylase subfamily [polymorphum gilvum
           SL003B-26A1]
 gi|326414036|gb|ADZ71099.1| Lytic murein transglycosylase subfamily [Polymorphum gilvum
           SL003B-26A1]
          Length = 379

 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 19/140 (13%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI---DSDIPIISKETI 75
              +G++     +    L   +                    + +    S +   S   +
Sbjct: 246 WARLGVTARAGSLPPGALAASLILPQGRKGPKFL--AYPNFAVYLKWNQSFVYTTSAAYL 303

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           A      A Y                   G +   ++ L+++L   G       +     
Sbjct: 304 ATRLAGAAPYD------------AGSPEPGLADAEMRLLQQKLQARGH--DVGKIDGILG 349

Query: 136 AYVESAVKLFQMRHGLDPSG 155
           +   +AV+  Q+R GL   G
Sbjct: 350 SGTRAAVRAEQLRLGLPADG 369


>gi|304403864|ref|ZP_07385526.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304346842|gb|EFM12674.1| ErfK/YbiS/YcfS/YnhG family protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 469

 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 34/118 (28%), Gaps = 12/118 (10%)

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
             P  II    +  L      +   +  +    G+    E       E PN         
Sbjct: 323 NEPLRIIVDKSVHRLAVVSGDVLVRSYKIGLGGGRTPEGEFNISEKVENPNGR------S 376

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
                S  +   +     +H T EP          + GC+R+   ++ +L   +   T
Sbjct: 377 DGPFGSRGMTLSNTR-YAIHGTDEPQSLGGDE---SLGCIRMSREDVEELYDLVPLGT 430


>gi|302381169|ref|YP_003816992.1| peptidoglycan-binding protein [Brevundimonas subvibrioides ATCC
           15264]
 gi|302191797|gb|ADK99368.1| Peptidoglycan-binding domain 1 protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 269

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V+ L+  L+  G       +        E+A+K +Q    L P  ++   T +A+  
Sbjct: 2   DVRALQRLLLAQGF--DPGPIDGQIGKKTEAALKAWQAARRLLPDAVIGPRTRDALAA 57


>gi|226941433|ref|YP_002796507.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
 gi|226716360|gb|ACO75498.1| ErfK/YbiS/YcfS/YnhG family protein [Laribacter hongkongensis HLHK9]
          Length = 218

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 51/179 (28%), Gaps = 13/179 (7%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
             +  G  ++ V + + +L   +      R  VI    +       S      ++     
Sbjct: 46  NPRHPGEPWIRVGVGSQTLTLFDGDGTPRRHWVISTAKNGVGEQFGSYQTPRGWHTVCDK 105

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
             +    D +   RQD  +     +   +   K+  +  + W         F Q      
Sbjct: 106 IGADAAPDAIFYRRQDTGWRYSAEL-ARENPDKDWILTRILW--LCGAEPGFNQGELPDG 162

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPTW 363
            +         +   Y+H     + F       + GCVR+      DL   +   T  W
Sbjct: 163 TLVD-----SYQRGIYIHGGGAHVPFGTPT---SKGCVRMTTPSVIDLFELVPTGTDVW 213


>gi|153009062|ref|YP_001370277.1| N-acetylmuramoyl-L-alanine amidase [Ochrobactrum anthropi ATCC
           49188]
 gi|151560950|gb|ABS14448.1| N-acetylmuramoyl-L-alanine amidase family 2 [Ochrobactrum anthropi
           ATCC 49188]
          Length = 268

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G +   V+ L+  L + G       ++  FD   E+ +K FQ      +  G+ D S
Sbjct: 195 LARGENGQPVEALQSMLALYGY---EIAITGVFDEGTETVIKAFQRHFRTQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|332716513|ref|YP_004443979.1| putative membrane-bound lytic murein transglycosylase
           [Agrobacterium sp. H13-3]
 gi|325063198|gb|ADY66888.1| putative membrane-bound lytic murein transglycosylase
           [Agrobacterium sp. H13-3]
          Length = 423

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 11/84 (13%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           +I   GG    WP  P   L +         L+ R+   G  D    +   F +  ++A+
Sbjct: 346 EIAGYGGMQQKWPR-PDGTLDIREK----FELQTRMKELGYYDGE--VDGNFGSGSKAAI 398

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN 166
              Q R GL+  G      L A+ 
Sbjct: 399 SAIQSRMGLETDGQPSQRLLRALR 422


>gi|121602044|ref|YP_989279.1| ErfK/YbiS/YcfS/YnhG family protein [Bartonella bacilliformis KC583]
 gi|120614221|gb|ABM44822.1| ErfK/YbiS/YcfS/YnhG family protein [Bartonella bacilliformis KC583]
          Length = 232

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 54/197 (27%), Gaps = 44/197 (22%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + +  +     R +   E       ++++     L  +      LR  + VG+     
Sbjct: 57  PAIDLTTIHPKFWRQQVDYETTYPPGTLVIDTEKCFLYLIRENGKALRYGIGVGKEG-LA 115

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
                 I      P W    +++ ++                                  
Sbjct: 116 FQGTGVIQYKRQWPSWRPTAAMMAREP--------------------------------- 142

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVR 345
                 +       G  N + +  +      ++  + +H + E           +SGC+R
Sbjct: 143 --ERYGHLGEGMPAGPENPLGARALYLFQDGKDTLFRIHGSHETWSIGQ---AISSGCIR 197

Query: 346 V--RNIIDLDVWLLKDT 360
           +  ++IIDL   +   +
Sbjct: 198 LLNQDIIDLYDRVPNGS 214


>gi|331699437|ref|YP_004335676.1| peptidoglycan-binding domain 1 protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326954126|gb|AEA27823.1| Peptidoglycan-binding domain 1 protein [Pseudonocardia
           dioxanivorans CB1190]
          Length = 171

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P++P+     S +++ L++ L           ++   +A    A+   Q    L  +G +
Sbjct: 93  PVKPVTPVAPSAAIETLQKELGQLNYY--EGPVTGVMNAQTTQAITYLQRDAHLPQTGTM 150

Query: 158 DSSTLEAMN 166
           +++T  A+ 
Sbjct: 151 NAATQAALA 159


>gi|321469983|gb|EFX80961.1| hypothetical protein DAPPUDRAFT_303785 [Daphnia pulex]
          Length = 559

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 15/82 (18%)

Query: 118 LIISGDLDPSKGLSV----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G LDP+              V  A+  FQ   GL+ +G++D  T   M+ P     
Sbjct: 3   LARFGYLDPALQNPSSGALISGDSVRRAIIDFQSFAGLNQTGILDPETSTWMSKPRCGVR 62

Query: 169 ------VDLRIRQLQVNLMRIK 184
                    R ++  +   R +
Sbjct: 63  DRVGAGSSARRKRYALQGARWR 84


>gi|77464778|ref|YP_354282.1| hypothetical protein RSP_1199 [Rhodobacter sphaeroides 2.4.1]
 gi|126463620|ref|YP_001044734.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|77389196|gb|ABA80381.1| secreted conserved hypothetical protein [Rhodobacter sphaeroides
           2.4.1]
 gi|126105284|gb|ABN77962.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 200

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 50/170 (29%), Gaps = 48/170 (28%)

Query: 183 IKKLLEQ-KMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +        +    VLV+I + +L    E+G+  L     V   D  T    + + + + 
Sbjct: 56  LDWQPYFSNLRNGAVLVDITSRALHFWSEDGQTYLLFPTSVPLSDDLTRRGRTEVVQKVV 115

Query: 241 NPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ 300
            P W    ++ +        ++P++                                   
Sbjct: 116 APPWRPTPAMKE--------RNPEW-------------------------------PDMV 136

Query: 301 DPG-KINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
             G   N + +  +        Y +H T +        R  ++GC+ + N
Sbjct: 137 PGGAPDNPLGTHALYLS--WTYYRIHGTHDTRKIG---RKSSNGCIGLYN 181


>gi|146339031|ref|YP_001204079.1| hypothetical protein BRADO1982 [Bradyrhizobium sp. ORS278]
 gi|146191837|emb|CAL75842.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 273

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPT 362
            + M    I F++      H +      + +    + GCVR+   +   L   +L++ P 
Sbjct: 95  NSPM-PYAIFFHNGYAI--HGS---YAIDRLGGPASHGCVRLHPHHAARLFDLVLQEGPE 148

Query: 363 WSRYHIEEVVKTRKTTP 379
            +   + +  +    TP
Sbjct: 149 HTTIEVTDAPRPDDPTP 165


>gi|83859898|ref|ZP_00953418.1| membrane-bound lytic murein transglycosylase, putative
           [Oceanicaulis alexandrii HTCC2633]
 gi|83852257|gb|EAP90111.1| membrane-bound lytic murein transglycosylase, putative
           [Oceanicaulis alexandrii HTCC2633]
          Length = 402

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 9/116 (7%)

Query: 55  FLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
                D+ +  +        ++   K ++    +   G WP+               + L
Sbjct: 296 AFTNFDVIMRYNNSTAYALGVSYLAKRLSGLDALP--GDWPQDNPPITR-----SQAREL 348

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           ++ L   G      G+   F A   +A+K FQ  +GL P G       EA+     
Sbjct: 349 QQTLTDLGHDTR--GVDGIFGANSRAALKSFQAANGLTPDGYAGRLAYEAVMARAQ 402


>gi|298291066|ref|YP_003693005.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296927577|gb|ADH88386.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 222

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 45/146 (30%), Gaps = 10/146 (6%)

Query: 224 VDRQTPILHSRINRIMFNPYWVI--PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEV 281
              Q+ ++ + I  I+      +  PRSI+ +  ++  R +                +  
Sbjct: 78  AATQSALMPAGIAPIVVPLPEPVVIPRSIVAQINLSRQRMEVTVDGVPRYSWPISTARRG 137

Query: 282 FVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
           +   V    P+     +         M    I F        H T +      + R  + 
Sbjct: 138 YRTPVGSYRPQRMYRRYFSRKYDNAPM-PYSIFFNGGYAI--HGTTD---LKRLGRPASH 191

Query: 342 GCVRVR--NIIDLDVWLLKDTPTWSR 365
           GCVR+   N   L   + +     +R
Sbjct: 192 GCVRLHPSNAATLFALVKEYGAGNTR 217


>gi|114777595|ref|ZP_01452576.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1]
 gi|114552066|gb|EAU54583.1| hypothetical protein SPV1_07806 [Mariprofundus ferrooxydans PV-1]
          Length = 154

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDT 360
            Y+H T    L        + GC+R+RN    +L   +  + 
Sbjct: 110 IYIHGTHAEALAGTP---ASHGCIRMRNADIIELFAHVRINE 148


>gi|121997021|ref|YP_001001808.1| lytic murein transglycosylase [Halorhodospira halophila SL1]
 gi|121588426|gb|ABM61006.1| lytic murein transglycosylase [Halorhodospira halophila SL1]
          Length = 395

 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 8/78 (10%)

Query: 99  IRPLHLG---NSSVSVQRLRER---LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             PL  G   + +     LR+    L   G    +            +A++ +Q   GL 
Sbjct: 320 APPLRAGFPDDPAPRRSELRQAQEVLNELGF--DAGTPDGLLGPRTRAALRAYQQDQGLP 377

Query: 153 PSGMVDSSTLEAMNVPVD 170
             G  D   LE +    +
Sbjct: 378 ADGYPDPKILERLQEKAE 395


>gi|154248430|ref|YP_001419388.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154162515|gb|ABS69731.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 398

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 41/138 (29%), Gaps = 11/138 (7%)

Query: 38  EIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPEL 97
            +++E         F            +           + E+ +A        G    L
Sbjct: 159 GLVDELQRQDW-VGFAIRY-NGPGYAKNQYDTKLAGAFRRWERWLAA----AGAGTANPL 212

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P     L      ++ ++++LI  G       +   +      AV  FQ   GL  +G  
Sbjct: 213 PQHT-RLTKR--EIEAVQQQLIDLGY-PKIGLVDGKWGPDTTGAVSAFQAFEGLPTTGDY 268

Query: 158 DSSTLEAMNVPVDLRIRQ 175
           D +T +A+      R   
Sbjct: 269 DDATRQALAE-ATPRAVS 285


>gi|297563702|ref|YP_003682676.1| peptidoglycan-binding protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296848150|gb|ADH70170.1| Peptidoglycan-binding domain 1 protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 3/66 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR-HGLDPSGM 156
             RPL  G+S   V++    L   G       +   +      AV+ +Q    G++ +G 
Sbjct: 131 AYRPLEPGSSGEDVRQFERALAELGY--SGFTVDDEYTWLTAEAVRRWQDDTEGMEVTGE 188

Query: 157 VDSSTL 162
           V  S +
Sbjct: 189 VHPSQI 194


>gi|307317848|ref|ZP_07597286.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
 gi|306896610|gb|EFN27358.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium meliloti AK83]
          Length = 405

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 10/137 (7%)

Query: 35  VLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSR 91
           V+ +             F    +R      SD+P+         +  E A+   +     
Sbjct: 136 VISDRQIAPVEVASEMLFQPSESRPQGPALSDVPLRPAIGEFNQSAVEVAMTDKRPSPVA 195

Query: 92  GGWPELPIRPL--HLGNSSVSVQRLRERLIISGDLDPSKGLSVAF-DAYVESAVKLFQMR 148
               ++PIR L    G    SV+ L+  L   G      GL   F      +A++ FQ  
Sbjct: 196 SDEEKVPIRILITRRGTQ-ESVRDLQTLLNTLGY---DAGLPDGFSGPATAAAIEAFQRA 251

Query: 149 HGLDPSGMVDSSTLEAM 165
             L   G V    +EA+
Sbjct: 252 EALPVEGKVTPELIEAV 268


>gi|325292881|ref|YP_004278745.1| Lysozyme [Agrobacterium sp. H13-3]
 gi|325060734|gb|ADY64425.1| Lysozyme [Agrobacterium sp. H13-3]
          Length = 307

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 3/65 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMN 166
              V+  +E L  +G       +     A  ++AV  +Q  H  L   G++  +T+  + 
Sbjct: 182 DPVVKEAQELLTTAGL--NPGAIDGWMGAKTKAAVIAYQKAHPHLIADGIIGPATIAQLR 239

Query: 167 VPVDL 171
                
Sbjct: 240 RDASA 244


>gi|260432642|ref|ZP_05786613.1| membrane-bound lytic murein transglycosylase B [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416470|gb|EEX09729.1| membrane-bound lytic murein transglycosylase B [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 374

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 17/139 (12%)

Query: 43  SYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE--KAIAFYQD----------ILS 90
                      +  A     +    P      IA     + I  Y +          +  
Sbjct: 237 VRGQPWGGEVGSPAASSGTPVAILQPQKPGPRIAVFRNFQVIKRYNNSDSYAIGVGHLAD 296

Query: 91  R--GGWP-ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           R  GG P      P   G +    + L+ RL  +G    ++G         ++A+  +Q 
Sbjct: 297 RIAGGPPFRASFGPDENGLTLEDRKALQRRLTAAGY--DTQGADGVIGNNTKAAISAYQR 354

Query: 148 RHGLDPSGMVDSSTLEAMN 166
            +GL  +G    S L A+ 
Sbjct: 355 ANGLPVTGEPSVSLLRALG 373


>gi|206972916|ref|ZP_03233838.1| cell wall biogenesis enzyme [Bacillus cereus AH1134]
 gi|206731800|gb|EDZ49000.1| cell wall biogenesis enzyme [Bacillus cereus AH1134]
          Length = 277

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 38/78 (48%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + LG++   V  L+  L   G       ++  FD       K+FQ +  L+P+G+V+ +
Sbjct: 6   TIKLGSTGYYVTILQLNLSGLGVYYEKLAITGFFDEKTNKCTKIFQEKTKLNPNGIVEVN 65

Query: 161 TLEAMNVPVDLRIRQLQV 178
           T +++   V L  ++LQ 
Sbjct: 66  TWKSLFENVILIQKKLQT 83


>gi|89069939|ref|ZP_01157272.1| peptidoglycan binding domain protein [Oceanicola granulosus
           HTCC2516]
 gi|89044493|gb|EAR50621.1| peptidoglycan binding domain protein [Oceanicola granulosus
           HTCC2516]
          Length = 375

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 7/64 (10%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP    R L         + L+ERL  +G                 +AV+ +Q+ HGL
Sbjct: 308 GTWPR-QARVLETQER----RELQERLTSAGFCTRGA--DGLIGPDTVAAVRAYQLAHGL 360

Query: 152 DPSG 155
            P G
Sbjct: 361 RPDG 364


>gi|21264235|ref|NP_644735.1| lytic murein transglycosylase [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21110871|gb|AAM39253.1| lytic murein transglycosylase [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 425

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNVP 168
            +  P
Sbjct: 421 RLRAP 425


>gi|158336019|ref|YP_001517193.1| OpcA protein [Acaryochloris marina MBIC11017]
 gi|158306260|gb|ABW27877.1| OpcA protein [Acaryochloris marina MBIC11017]
          Length = 450

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++ L   G    +  +   +   +E+A++  Q + GL  +G  +S TL  +  
Sbjct: 62  QQLLAALGFY--TGPVDGIYGPRMEAALRSAQTKFGLAETGKPNSETLAKLRQ 112


>gi|156743429|ref|YP_001433558.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156234757|gb|ABU59540.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 397

 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 9/66 (13%)

Query: 309 ASTKIEFYSRN------NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
               +     +         +H T    LF    R  + GCV +   +    WL +  P 
Sbjct: 333 GKYWVVPNVPHVMYFYGGVALHGTYWHNLFGTGARP-SHGCVNL--PLKSAAWLYEWAPI 389

Query: 363 WSRYHI 368
            +   +
Sbjct: 390 GTPVRV 395


>gi|317419770|emb|CBN81806.1| Matrix metalloproteinase-16 [Dicentrarchus labrax]
          Length = 591

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L  +        +   ++SA+   Q R+GL+ +G +DS+T+E M  P
Sbjct: 29  LQRYGYLPSADPRMSVLRSARVMQSAIAAMQRRYGLNVTGTLDSNTIEWMKRP 81


>gi|284048918|ref|YP_003399257.1| 3D domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283953139|gb|ADB47942.1| 3D domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 194

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 3/102 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           LG+    V+ ++  L        +  +   +    +SAVK FQ ++    +G V  S   
Sbjct: 33  LGSKGQKVEEVQAMLSRLHYY--NGDIDGEYGTGTQSAVKKFQQKNRKPQTGEVTWSIYN 90

Query: 164 AMNVPVDLRIRQLQVN-LMRIKKLLEQKMGLRYVLVNIPAAS 204
            M+    L     +   +M       Q  G+  V        
Sbjct: 91  LMSKQSGLSFGHFRKTWIMEATGYSPQDPGVTGVTYTGAMMR 132


>gi|296136686|ref|YP_003643928.1| Peptidoglycan-binding domain 1 protein [Thiomonas intermedia K12]
 gi|295796808|gb|ADG31598.1| Peptidoglycan-binding domain 1 protein [Thiomonas intermedia K12]
          Length = 343

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           +E+L   G   P             + +K FQ   GL  SG++D +T+ A N 
Sbjct: 293 QEKLNAQGF--PVGTPDGVMGPRTRAELKRFQNSRGLPESGVLDQATIAAFNQ 343


>gi|163733182|ref|ZP_02140626.1| transglycosylase, putative [Roseobacter litoralis Och 149]
 gi|161393717|gb|EDQ18042.1| transglycosylase, putative [Roseobacter litoralis Och 149]
          Length = 451

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + +++RL  +G    ++G+          A++ FQ   GL P G   S+ L+ + 
Sbjct: 399 KEIQQRLTRAGF--NTQGVDGRIGPNTIDAIRAFQRNRGLVPDGYASSALLQKLR 451


>gi|312876406|ref|ZP_07736390.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796764|gb|EFR13109.1| ErfK/YbiS/YcfS/YnhG family protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 190

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 16/124 (12%)

Query: 258 LLRQDPQYLKDNNIHMID---EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIE 314
            +     Y+    I         GK      V        ++      G+        + 
Sbjct: 39  SIDDSRLYVFKEGILYKSYPISPGKPSTPTPVGTFKIISKDYW-----GEG--FGGRWMG 91

Query: 315 FYSRNN-TYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHIEEV 371
              R     +H T             + GCVR+  +++ +L  ++   T       +   
Sbjct: 92  LNVRYGKYGIHGTIYESYIGA---HVSKGCVRMLNKDVKELFSYIPIGTTVIVSEGLYGE 148

Query: 372 VKTR 375
            +  
Sbjct: 149 FRNG 152


>gi|288920824|ref|ZP_06415122.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
 gi|288347783|gb|EFC82062.1| ErfK/YbiS/YcfS/YnhG family protein [Frankia sp. EUN1f]
          Length = 257

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 18/68 (26%), Gaps = 15/68 (22%)

Query: 300 QDPGKINAMASTKIEFYS-----------RNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +                                 +H T  P L  +     + GC+R+RN
Sbjct: 181 RPADPNGPWGPFAFGLSGFSDVITQFNGADGIIGLHGTNRPDLVGSD---VSMGCIRLRN 237

Query: 349 IIDLDVWL 356
             DL   +
Sbjct: 238 -DDLLRLV 244


>gi|120599845|ref|YP_964419.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           W3-18-1]
 gi|120559938|gb|ABM25865.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. W3-18-1]
          Length = 559

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            +      FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N
Sbjct: 502 RNARRVTHFDLKLENDLKAFQSQHGLKADGIAGNQTLVRLNLYLSEQGPRLTDN 555


>gi|146292219|ref|YP_001182643.1| peptidoglycan binding domain-containing protein [Shewanella
           putrefaciens CN-32]
 gi|145563909|gb|ABP74844.1| Peptidoglycan-binding domain 1 protein [Shewanella putrefaciens
           CN-32]
 gi|319425519|gb|ADV53593.1| type II general secretion pathway protein A, GspA [Shewanella
           putrefaciens 200]
          Length = 559

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
            +      FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N
Sbjct: 502 RNARRVTHFDLKLENDLKAFQSQHGLKADGIAGNQTLVRLNLYLSEQGPRLTDN 555


>gi|297182496|gb|ADI18658.1| hypothetical protein [uncultured Acidobacteria bacterium
           HF4000_26D02]
          Length = 349

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 39/131 (29%), Gaps = 4/131 (3%)

Query: 224 VDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF- 282
             R +  LHS  +  + +     P S+ +   +    + P    +    +     +    
Sbjct: 42  PGRASARLHSTASLRIPSLLQNGPPSLTRPTGLPAAARSPVTASEGWWRIPGSNRRPPDC 101

Query: 283 -VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETS 341
               +            R  PG  +   +      +  +  +   P+  +F+  +   ++
Sbjct: 102 KPGALPAELIPHHARPRRCVPGTSS--GNRWPRLAAPLSVPLSHGPQRGVFDASLGEGSA 159

Query: 342 GCVRVRNIIDL 352
           G +R      L
Sbjct: 160 GGIRALGPFRL 170


>gi|254561960|ref|YP_003069055.1| hypothetical protein METDI3562 [Methylobacterium extorquens DM4]
 gi|254269238|emb|CAX25204.1| Conserved hypothetical protein; putative exported protein, putative
           ErfK/YbiS/YcfS/YnhG domain [Methylobacterium extorquens
           DM4]
          Length = 211

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 12/71 (16%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T        + R  + GC+R+  RN   L   + +
Sbjct: 74  FSREWDNAPMPHAIFFTQVGHAIHGTTHTR---RLGRAASHGCIRLSQRNAATLFTLVKQ 130

Query: 359 DTPTWSRYHIE 369
                +R  IE
Sbjct: 131 QKMANTRVVIE 141


>gi|15965950|ref|NP_386303.1| putative transglycosylase transmembrane protein [Sinorhizobium
           meliloti 1021]
 gi|307308261|ref|ZP_07587970.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
 gi|15075219|emb|CAC46776.1| Membrane-bound lytic murein transglycosylase B [Sinorhizobium
           meliloti 1021]
 gi|306901259|gb|EFN31865.1| lytic murein transglycosylase [Sinorhizobium meliloti BL225C]
          Length = 405

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G     ++ L+ RL   G       +     +   +A++  Q++ G+ 
Sbjct: 335 GAPPYQQGNPEPGLGDAEMKALQTRLQALGH--DVGKIDGILGSGTRAALQKEQLKLGIP 392

Query: 153 PSGMVDSSTLEAM 165
             G      LEA+
Sbjct: 393 ADGWATPGLLEAL 405


>gi|307319728|ref|ZP_07599153.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
 gi|306894659|gb|EFN25420.1| lytic murein transglycosylase [Sinorhizobium meliloti AK83]
          Length = 405

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G     ++ L+ RL   G       +     +   +A++  Q++ G+ 
Sbjct: 335 GAPPYQQGNPEPGLGDAEMKALQTRLQALGH--DVGKIDGILGSGTRAALQKEQLKLGIP 392

Query: 153 PSGMVDSSTLEAM 165
             G      LEA+
Sbjct: 393 ADGWATPGLLEAL 405


>gi|291568104|dbj|BAI90376.1| peptidoglycan-binding domain 1 protein [Arthrospira platensis
           NIES-39]
          Length = 606

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +++ RLI  G L P   +   F     +A + FQ    +  SG++DS T + +     +R
Sbjct: 114 QIQTRLIDLGLLAP--PVDGIFGPLSRAAFRRFQELINISESGVLDSETAQKLIDTTTIR 171

Query: 173 IRQLQVN 179
              +++ 
Sbjct: 172 RENMRLQ 178



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           +++ RLI  G L+P   +   F     +A + FQ    +  SG++ S T + +     +R
Sbjct: 27  QIQTRLIDLGLLNP--PVDGIFGPLSTAAFRRFQELMNISESGILASETAQKLLETTTMR 84

Query: 173 IRQLQV 178
              +++
Sbjct: 85  PPNMRL 90


>gi|152999733|ref|YP_001365414.1| peptidoglycan-binding domain-containing protein [Shewanella baltica
           OS185]
 gi|151364351|gb|ABS07351.1| Peptidoglycan-binding domain 1 protein [Shewanella baltica OS185]
          Length = 557

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N +R
Sbjct: 506 NQFDVQLENDLKSFQSQHGLKADGIAGNQTLVRLNLYLSQQGPRLTDNGVR 556


>gi|255010410|ref|ZP_05282536.1| putative phage-related protein [Bacteroides fragilis 3_1_12]
 gi|313148212|ref|ZP_07810405.1| peptidoglycan-binding domain 1 protein [Bacteroides fragilis
           3_1_12]
 gi|313136979|gb|EFR54339.1| peptidoglycan-binding domain 1 protein [Bacteroides fragilis
           3_1_12]
          Length = 264

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + + L         L + L  +G    S   S  F   ++ +V  FQ +  LD  G+V  
Sbjct: 2   KTIKLDYEGEEALLLCQGLKRNGY---SVNESRIFTQEMKESVVDFQRKSQLDADGIVGY 58

Query: 160 STLEAM---NVPVDLRIR 174
            T E++     P   R+ 
Sbjct: 59  RTWESLFFTGRPTTERLT 76


>gi|126733793|ref|ZP_01749540.1| hypothetical protein RCCS2_06539 [Roseobacter sp. CCS2]
 gi|126716659|gb|EBA13523.1| hypothetical protein RCCS2_06539 [Roseobacter sp. CCS2]
          Length = 250

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 42/170 (24%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFN 241
           R   +   + G   + V+  A  L  V       R  V VGR  R +    + +  +   
Sbjct: 55  RRSGIYNGEAGPNTLDVDPYAKFLYHVREDGTTTRYPVGVGRAGR-SIRGTTTMKFMRQW 113

Query: 242 PYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD 301
           P W   +++++ +                  +                      F     
Sbjct: 114 PGWTPTQNMLRTEP----------------EVY-------------------GPFRAGIP 138

Query: 302 PGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
            G  + + +  +     SR+  Y +H T +     N     ++GC+R+ N
Sbjct: 139 GGLRSPLGARALYLFRGSRDTHYRIHGTNDLESIGNSG---SAGCIRMFN 185


>gi|254413372|ref|ZP_05027143.1| opcA protein [Microcoleus chthonoplastes PCC 7420]
 gi|196179992|gb|EDX74985.1| opcA protein [Microcoleus chthonoplastes PCC 7420]
          Length = 455

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 3/87 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-L 176
           L   G       +       + +A+K  Q  +GL  +G  D  T E +    + R +Q +
Sbjct: 64  LSALGYYS--GPIDGIIGPRMFAAIKAAQKTYGLPRTGKADDKTKEKLREEYNERHQQEV 121

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAA 203
             N    ++     +    +   I AA
Sbjct: 122 NGNGQTRRQTYSADIEGSGIADAIAAA 148


>gi|163758707|ref|ZP_02165794.1| hypothetical protein HPDFL43_14827 [Hoeflea phototrophica DFL-43]
 gi|162283997|gb|EDQ34281.1| hypothetical protein HPDFL43_14827 [Hoeflea phototrophica DFL-43]
          Length = 319

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMNV 167
           LI  G L  +    +     V SAV+ FQ  H  L   G++  +TL+ +  
Sbjct: 196 LIKLGYLADAARGDM---KRVRSAVRRFQEAHPQLSNDGVMGRATLDQLQR 243


>gi|307942634|ref|ZP_07657982.1| protein ErfK/srfK [Roseibium sp. TrichSKD4]
 gi|307774273|gb|EFO33486.1| protein ErfK/srfK [Roseibium sp. TrichSKD4]
          Length = 53

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/57 (12%), Positives = 15/57 (26%), Gaps = 6/57 (10%)

Query: 286 VDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETS 341
           +     +          G  N + +  +   +    Y +H T E           +S
Sbjct: 2   IARERKKGRKLPAYMPGGPKNPLGARALYLGN--TIYRIHGTNEDWSIGQ---AVSS 53


>gi|237809403|ref|YP_002893843.1| Peptidoglycan-binding domain 1 protein [Tolumonas auensis DSM 9187]
 gi|237501664|gb|ACQ94257.1| Peptidoglycan-binding domain 1 protein [Tolumonas auensis DSM 9187]
          Length = 542

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V+ L   +  +  L     +S  FDA +   V+ FQ + GL   G+    TL  + + 
Sbjct: 453 ADVRWLEAAVSQALRLPVRNKVS-RFDAQLTDKVRQFQKQEGLVEDGVAGEQTLLRLVIR 511

Query: 169 VDLRIRQL 176
               + +L
Sbjct: 512 SQKAVPRL 519


>gi|163852687|ref|YP_001640730.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
 gi|163664292|gb|ABY31659.1| lytic murein transglycosylase [Methylobacterium extorquens PA1]
          Length = 393

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                WP    R          ++RL+  L   G               +  AV+ +Q+R
Sbjct: 320 ALAAPWPNGAARL-----DGPGLKRLQAGLAAKGLYAGE--QDGRAGPKLREAVRQYQIR 372

Query: 149 HGLDPSGMVDSSTLEAMNVPV 169
            GL   G    + LE +    
Sbjct: 373 EGLPADGYARPALLERLEGRP 393


>gi|163849538|ref|YP_001637581.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163661143|gb|ABY28510.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 368

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 19/107 (17%)

Query: 289 NSPEPPNFIFRQDPGKINAM-------ASTKIEFYSRNNTY-------MHDTPEPILFNN 334
            +       ++   G            +    +     + +       +H +        
Sbjct: 232 WAVSTGRAPYKTPAGTFRPFRLEKEHYSREWDDAPMPYSIFFTAAGHAIHASNATRQLG- 290

Query: 335 VVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             R  + GCVR+   +   L   +  + P  ++  I       +T  
Sbjct: 291 --RPASHGCVRLAPSHAAALFTLVRAEGPGATKVTITNGASAGRTAR 335


>gi|91793495|ref|YP_563146.1| lytic murein transglycosylase [Shewanella denitrificans OS217]
 gi|91715497|gb|ABE55423.1| Lytic murein transglycosylase [Shewanella denitrificans OS217]
          Length = 437

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++ L+E+L   G                 + ++ FQ   GL   G    ST  A+ +P
Sbjct: 380 IKALQEKLNQLGF--DVGEPDGVLGRNSMAGLQAFQRSKGLIADGYPGQSTFNALGLP 435


>gi|259418047|ref|ZP_05741966.1| lytic murein transglycosylase [Silicibacter sp. TrichCH4B]
 gi|259346953|gb|EEW58767.1| lytic murein transglycosylase [Silicibacter sp. TrichCH4B]
          Length = 455

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 13/68 (19%)

Query: 91  RGGWPELPIRPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +G WP         G+ +      + L++RL  +G    + G+         +AV+ +Q 
Sbjct: 387 KGSWPR--------GDRALTFSERKELQQRLTRAGF--STDGVDGRIGPNTVAAVRAYQS 436

Query: 148 RHGLDPSG 155
             GL P G
Sbjct: 437 AKGLMPDG 444


>gi|53803821|ref|YP_114311.1| hypothetical protein MCA1874 [Methylococcus capsulatus str. Bath]
 gi|53757582|gb|AAU91873.1| conserved domain protein [Methylococcus capsulatus str. Bath]
          Length = 241

 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 59/217 (27%), Gaps = 54/217 (24%)

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
           G +              R  +        + +   +    ++ +++P   LE +E GKV 
Sbjct: 48  GRIARHDWARRGPSKPARPAKPGH-----RNMTAPENVADFLHISVPRQRLELIEAGKVV 102

Query: 215 LRSTVIVGRVDRQ-------TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLK 267
               V   +           TP    R+   +      +P   +              L 
Sbjct: 103 AHYRVSTAKNGVGEKRGSECTPRGWHRVRAKI---GAGLPAGAVLVGRRPTGEIYTPLLA 159

Query: 268 DNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNN------- 320
             +       G++  +  + W                   +   +  F +R         
Sbjct: 160 ARH------PGRDWILSRILW-------------------LGGLQPGF-NRYGEVDTAWR 193

Query: 321 -TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV 354
             Y+H +P+          ++ GC+R+ +    DL  
Sbjct: 194 YIYIHGSPDD---GVDGTPQSHGCIRLTSADVIDLFD 227


>gi|149921154|ref|ZP_01909612.1| hypothetical protein PPSIR1_24989 [Plesiocystis pacifica SIR-1]
 gi|149818041|gb|EDM77500.1| hypothetical protein PPSIR1_24989 [Plesiocystis pacifica SIR-1]
          Length = 335

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                ++ A++     AVK +Q RHGL   GMV + T  
Sbjct: 29  ATGTSVTGAWNDETVEAVKQWQGRHGLKADGMVGAGTYA 67


>gi|212635639|ref|YP_002312164.1| membrane-bound lytic transglycolase-like protein [Shewanella
           piezotolerans WP3]
 gi|212557123|gb|ACJ29577.1| Membrane-bound lytic transglycolase-like protein [Shewanella
           piezotolerans WP3]
          Length = 396

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+ +L   G             +     ++ FQ  +GL   G  + +T +A+ V
Sbjct: 339 ARVKALQSQLNALGF--DVGKPDGILGSKSLKGLQAFQKGNGLVADGYPNEATFKALGV 395


>gi|317052071|ref|YP_004113187.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
 gi|316947155|gb|ADU66631.1| ErfK/YbiS/YcfS/YnhG family protein [Desulfurispirillum indicum S5]
          Length = 350

 Score = 42.3 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 16/126 (12%)

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW----NSPEPPNFIFRQDPGKI-- 305
           + + M   +    Y  +   + +    K    + ++W    +  +   +      G+   
Sbjct: 231 RDECMPREQGGNCYFTEPGEYAVR--WKIYEPDGIEWCIPPSMEKEERYAADIAAGQRCF 288

Query: 306 -NAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
              + +  +          H T         +   +SGC+R  N  D+   L K      
Sbjct: 289 PGVLGNFALNIGKTYAI--HGTRNLDSIGQRM---SSGCIRTHN--DVAEQLYKLMREGD 341

Query: 365 RYHIEE 370
           R  I+E
Sbjct: 342 RVVIQE 347


>gi|240140021|ref|YP_002964498.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
 gi|240009995|gb|ACS41221.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens AM1]
          Length = 393

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                WP    R          ++RL+  L   G               +  AV+ +Q+R
Sbjct: 320 ALAAPWPNGAARL-----DGPGLKRLQAGLAAKGLY--GGEQDGRAGPKLREAVRQYQIR 372

Query: 149 HGLDPSGMVDSSTLEAMNVPV 169
            GL   G    + LE +    
Sbjct: 373 EGLPADGYARPALLERLEGRP 393


>gi|148927471|ref|ZP_01810974.1| Peptidoglycan-binding domain 1 protein [candidate division TM7
           genomosp. GTL1]
 gi|147887195|gb|EDK72662.1| Peptidoglycan-binding domain 1 protein [candidate division TM7
           genomosp. GTL1]
          Length = 194

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G++   V+ ++ RL+ S  L  +  +   F +      + FQ +  +   G+V   T   
Sbjct: 110 GSTGTCVKYIQ-RLLNSFPLAGTLAVDGIFGSKTRGTTRSFQSKEHIRVDGIVGPQTWRH 168

Query: 165 MNVP 168
           +   
Sbjct: 169 LCAS 172


>gi|110632387|ref|YP_672595.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
            BNC1]
 gi|110283371|gb|ABG61430.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 1261

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++  ++  L   G                 SA++ FQ ++GL+ +G +D   + A+
Sbjct: 1200 AISNVQLILTRIGY--DPGPADGVMGEKTRSAIRSFQKQNGLEETGEIDEPLVRAL 1253


>gi|154250914|ref|YP_001411738.1| peptidoglycan-binding domain-containing protein [Parvibaculum
            lavamentivorans DS-1]
 gi|154154864|gb|ABS62081.1| Peptidoglycan-binding domain 1 protein [Parvibaculum lavamentivorans
            DS-1]
          Length = 1012

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 24/104 (23%)

Query: 86   QDILSRGGWPELPIRPLHLGNSS----------------------VSVQRLRERLIISGD 123
            +  ++ G W      P+  G+                          V R++E L   G 
Sbjct: 908  RAKIASGTWRAKKPEPVANGDMGTLKRWDISSMEGATSASAPVTRADVARVQELLNRLGY 967

Query: 124  LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
               +             A+  +Q+  GL+ +G     TL ++  
Sbjct: 968  --NAGSPDGLMGPRTRDAILEYQLTEGLETTGTATRETLTSLEA 1009


>gi|119385237|ref|YP_916293.1| lytic murein transglycosylase [Paracoccus denitrificans PD1222]
 gi|119375004|gb|ABL70597.1| lytic murein transglycosylase [Paracoccus denitrificans PD1222]
          Length = 417

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 15/95 (15%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGN---SSVSVQRLRERLIISGDLDPSKGLS 131
           +A   +AIA  + I  +G WP         G+   S+     ++  L+  G    + G+ 
Sbjct: 334 VAYLGEAIAGRRGI--QGNWPR--------GDRTLSNNEKAEIQRLLMARGF--DTGGVD 381

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                    A++ FQ   G+ P G  D+  L  + 
Sbjct: 382 GKLGGQSTEAIRAFQRSRGVTPDGYADTRLLAMLR 416


>gi|24372876|ref|NP_716918.1| general secretion pathway protein a [Shewanella oneidensis MR-1]
 gi|24346991|gb|AAN54363.1|AE015573_10 general secretion pathway protein a [Shewanella oneidensis MR-1]
          Length = 554

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N
Sbjct: 505 FDLKLENDLKAFQSQHGLKADGIAGNQTLVRLNLYLSDQGPRLTDN 550


>gi|113971231|ref|YP_735024.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885915|gb|ABI39967.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-4]
          Length = 562

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N
Sbjct: 513 FDLKLENDLKAFQSQHGLKADGIAGNQTLVRLNLYLSDQGPRLTDN 558


>gi|148273399|ref|YP_001222960.1| hypothetical protein CMM_2215 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831329|emb|CAN02285.1| hypothetical protein with peptidoglycan binding domain [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 148

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 102 LHLGNSSVSVQRLRERLIISGD-LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           L +GN S +V RL++ L    D       +   F   +++A++  Q   G+   G+  S 
Sbjct: 69  LEIGNQSPAVTRLQQELKDGCDSAPQDIAVDGQFGRAIKAALQSAQSTLGITADGIYGSQ 128

Query: 161 T 161
           T
Sbjct: 129 T 129


>gi|114048469|ref|YP_739019.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889911|gb|ABI43962.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. MR-7]
          Length = 562

 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVN 179
           FD  +E+ +K FQ +HGL   G+  + TL  +N+ +  +  +L  N
Sbjct: 513 FDLKLENDLKAFQSQHGLKADGIAGNQTLVRLNLYLSDQGPRLTDN 558


>gi|237735561|ref|ZP_04566042.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229381306|gb|EEO31397.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 44

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 130 LSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +   F    + A+ +FQ   GL   G+V S+T + +
Sbjct: 3   VDGDFGKKTKEAIIVFQRNRGLVQDGVVGSNTWDWL 38


>gi|254284845|ref|ZP_04959812.1| VgrG protein [Vibrio cholerae AM-19226]
 gi|150425630|gb|EDN17406.1| VgrG protein [Vibrio cholerae AM-19226]
          Length = 108

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 4/73 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM----RHGLDPS 154
                 GN S  V+ L+E LI  G      G    F +  ++A++ FQ      H   PS
Sbjct: 32  ASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPS 91

Query: 155 GMVDSSTLEAMNV 167
             + + T+ +  V
Sbjct: 92  YSIGAVTVLSAKV 104


>gi|254500718|ref|ZP_05112869.1| N-acetylmuramoyl-L-alanine amidase domain protein [Labrenzia
           alexandrii DFL-11]
 gi|222436789|gb|EEE43468.1| N-acetylmuramoyl-L-alanine amidase domain protein [Labrenzia
           alexandrii DFL-11]
          Length = 263

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLE 163
           G     V+ L+  L + G       ++  FD      V  FQ         G+VD+ST+E
Sbjct: 194 GEEGQPVEALQSMLALYGY---EVDINGRFDRRTSEVVTAFQRHFRPEKVDGVVDASTIE 250


>gi|15223067|ref|NP_177174.1| MMP (MATRIX METALLOPROTEINASE); metalloendopeptidase/
           metallopeptidase [Arabidopsis thaliana]
 gi|2194124|gb|AAB61099.1| Similar to Glycine metalloendoproteinase (gb|U63725) [Arabidopsis
           thaliana]
 gi|332196906|gb|AEE35027.1| matrix metalloproteinase [Arabidopsis thaliana]
          Length = 378

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +   + R+++     G +    S   +  FD  +++AV+L+Q    L+ +G +D+ T+
Sbjct: 53  GQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTGELDALTI 112

Query: 163 EAMNVP 168
           + + +P
Sbjct: 113 QHIVIP 118


>gi|291567853|dbj|BAI90125.1| two-component hybrid sensor and regulator [Arthrospira platensis
           NIES-39]
          Length = 1082

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 10/82 (12%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN- 166
           S ++  ++  L   G    +  +   +    E+A++  Q  +GL  +G  D +TL+ +  
Sbjct: 196 SDNIIAIQTLLANGGFY--NGSIDNIWGVETETAIQDAQNAYGLPVTGQPDRATLQQLVQ 253

Query: 167 -------VPVDLRIRQLQVNLM 181
                   P + RI  + ++L 
Sbjct: 254 STNNINLTPENQRIAVIAIDLN 275


>gi|189520793|ref|XP_699803.3| PREDICTED: matrix metalloproteinase-24 [Danio rerio]
          Length = 608

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  L+  L   G L P       +  +  ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 40  IVELQTWLKNYGYLLPHDIRTSDLRSEKAMQSAVAAMQRFYGIPVTGILDQTTIEWMRKP 99


>gi|110741618|dbj|BAE98757.1| predicted GPI-anchored protein [Arabidopsis thaliana]
          Length = 378

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +   + R+++     G +    S   +  FD  +++AV+L+Q    L+ +G +D+ T+
Sbjct: 53  GQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTGELDALTI 112

Query: 163 EAMNVP 168
           + + +P
Sbjct: 113 QHIVIP 118


>gi|73669458|ref|YP_305473.1| hypothetical protein Mbar_A1955 [Methanosarcina barkeri str. Fusaro]
 gi|72396620|gb|AAZ70893.1| hypothetical protein Mbar_A1955 [Methanosarcina barkeri str. Fusaro]
          Length = 1282

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 6/96 (6%)

Query: 68   PIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
            P    E  A T  ++++ Q  ++    P         G +   V+ +   L+  G LD +
Sbjct: 917  PTKDTEISASTSVSLSYLQ--VAAESDPARSQGKTTPGATDS-VKIVEAALVEEGYLDDA 973

Query: 128  KGLSVAFDAYVESAVKLFQMRHGLD---PSGMVDSS 160
                 A+ +   +A K +Q   G       G+    
Sbjct: 974  YAYDGAYGSATINAYKQWQESLGSPAKYCDGIPGKK 1009


>gi|291486076|dbj|BAI87151.1| hypothetical protein BSNT_05362 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 480

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +  ++  V+  +  L   G           F   ++ AV  FQ ++ L+ +G++D
Sbjct: 389 KEPLKVDMNNEDVKHAQVLLK--GLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVID 446

Query: 159 SSTLEAMNVPVDLR 172
           + T E +N  ++ +
Sbjct: 447 TRTAETLNRQIEKK 460


>gi|110833878|ref|YP_692737.1| hypothetical protein ABO_1017 [Alcanivorax borkumensis SK2]
 gi|110646989|emb|CAL16465.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 122

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H TP+           + GC+R+RN
Sbjct: 78  IYIHGTPDYEPMGTP---ASHGCIRMRN 102


>gi|297838805|ref|XP_002887284.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333125|gb|EFH63543.1| hypothetical protein ARALYDRAFT_476141 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 378

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDP--SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +   + R+++     G +    S   +  FD  +++AV+L+Q    L+ +G +D+ T+
Sbjct: 53  GQNVEGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKTAVELYQRNFKLNVTGELDAMTI 112

Query: 163 EAMNVP 168
           + + +P
Sbjct: 113 KHIVIP 118


>gi|268609047|ref|ZP_06142774.1| spore cortex-lytic enzyme, pre-pro-form [Ruminococcus flavefaciens
           FD-1]
          Length = 169

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
             +++    AV+ FQ  +GL  +G  DS T + +       I +L 
Sbjct: 36  GQYNSETAEAVRKFQQIYGLPQTGETDSDTWDMIVSVYRDSIDELP 81



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%), Gaps = 7/68 (10%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVA-----FDAYVESAVKLFQMRHGLDPSGMVDS 159
           G+    V  ++  L  SG       +        FD+    AV+  Q + GL  SG V+ 
Sbjct: 97  GDHGQLVYIIQAML--SGLCSAYDNMPDVAVCGDFDSETAEAVRAVQKKTGLPESGEVNC 154

Query: 160 STLEAMNV 167
            T   +  
Sbjct: 155 HTWNMLVK 162


>gi|160898818|ref|YP_001564400.1| peptidoglycan-binding domain-containing protein [Delftia
           acidovorans SPH-1]
 gi|160364402|gb|ABX36015.1| Peptidoglycan-binding domain 1 protein [Delftia acidovorans SPH-1]
          Length = 586

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 51/173 (29%), Gaps = 29/173 (16%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQ-----------------RLRERLIIS 121
           + +     I   G W  LP  + L L  +    Q                  +R+ LI  
Sbjct: 282 RTLVELGMIELLGKWSRLPYWQCLTLDQTHPDFQRQLRDWYEEGEAGIHQELVRQSLISK 341

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD-----SSTLEAMNVPVDLRIRQL 176
           G L P      A +     A+  FQ   G+  SG+VD      +  + + V  D  I ++
Sbjct: 342 GYLPPDAPAFTAGNPQWREAIGRFQADSGMVVSGVVDFNTYERALRDFVAVGADGHITRI 401

Query: 177 QVNLMRIKKLLEQK------MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR 223
             N      +           G        P   L+         R++   G 
Sbjct: 402 GWNTKSAAPVTTASENVAVGTGDYRYGAPAPDRKLDLWVENITPTRTSFETGE 454


>gi|185134733|ref|NP_001117842.1| matrix metalloproteinase-9 [Oncorhynchus mykiss]
 gi|20160306|emb|CAC85923.1| matrix metalloproteinase 9 [Oncorhynchus mykiss]
          Length = 675

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             P   L    +   +      L   G +D          A    A+   Q + GL+ +G
Sbjct: 29  TFPGDVLK-NMTDTELAN--SYLQRFGYMDVQHRSGFQSMASTSKALMRMQRQMGLEETG 85

Query: 156 MVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN-IPAASLEAVEN 210
            +D ST+ AM  P      +R  Q     +K        + Y ++N  P      +++
Sbjct: 86  TLDKSTVAAMKAPRCGVPDVRSYQTFQGDLKW---DHHDITYRILNYSPDMGASLIDD 140


>gi|16080577|ref|NP_391404.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|221311474|ref|ZP_03593321.1| hypothetical protein Bsubs1_19066 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315801|ref|ZP_03597606.1| hypothetical protein BsubsN3_18982 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320716|ref|ZP_03602010.1| hypothetical protein BsubsJ_18945 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325001|ref|ZP_03606295.1| hypothetical protein BsubsS_19101 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313070|ref|YP_004205357.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis BSn5]
 gi|81669165|sp|O35002|CTPB_BACSU RecName: Full=Carboxy-terminal processing protease CtpB;
           Short=C-terminal processing protease; Flags: Precursor
 gi|2618834|gb|AAC67263.1| putative protease [Bacillus subtilis]
 gi|2636050|emb|CAB15541.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis subsp. subtilis str. 168]
 gi|148356709|dbj|BAF63027.1| serine protease [Bacillus subtilis subsp. natto]
 gi|320019344|gb|ADV94330.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus subtilis BSn5]
          Length = 480

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 2/74 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             PL +  ++  V+  +  L   G           F   ++ AV  FQ ++ L+ +G++D
Sbjct: 389 KEPLKVDMNNEDVKHAQVLLK--GLSFDPGREDGYFSKDMKKAVMAFQDQNKLNKTGVID 446

Query: 159 SSTLEAMNVPVDLR 172
           + T E +N  ++ +
Sbjct: 447 TRTAETLNQQIEKK 460


>gi|170749757|ref|YP_001756017.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
 gi|170656279|gb|ACB25334.1| lytic murein transglycosylase [Methylobacterium radiotolerans JCM
           2831]
          Length = 430

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           L+ RL   G    + G+         +A++ FQ   GL P G  D++ L+ +    
Sbjct: 377 LQTRLTERGF--ATGGVDGKIGPKTRAALRAFQGSVGLPPDGYADAALLDRVRAAP 430


>gi|110678455|ref|YP_681462.1| peptidoglycan binding domain-containing protein [Roseobacter
           denitrificans OCh 114]
 gi|109454571|gb|ABG30776.1| peptidoglycan binding domain protein [Roseobacter denitrificans OCh
           114]
          Length = 377

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               +  L+ RL  SG    ++G         ++A++ +Q   GL  +G+     L+ + 
Sbjct: 321 KDDRI-ALQIRLTASGF--DTQGADGVIGPNSQAAIRAYQASQGLPVTGVPSPQLLDRLQ 377


>gi|86139891|ref|ZP_01058457.1| hypothetical protein MED193_12698 [Roseobacter sp. MED193]
 gi|85823520|gb|EAQ43729.1| hypothetical protein MED193_12698 [Roseobacter sp. MED193]
          Length = 431

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           + I    GW  L +            + ++  L   G    +      +     +A++ F
Sbjct: 355 EAIAGACGWSTLDLSR-------DDYRAIQTMLNAGGF--DAGTPDGVWGNGSRNAMRTF 405

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPVDL 171
           Q ++GL P+G  D +TLEA+ +    
Sbjct: 406 QEQNGLAPTGAPDRATLEALGIQASD 431


>gi|307946177|ref|ZP_07661512.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307769841|gb|EFO29067.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 255

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               +  ++  L   G    +             A++ F++  GL  +G      ++ + 
Sbjct: 189 RDARLANIQRLLADLGYGPLAA--DGVMGENTSIAIRRFELDRGLPLTGEPSPDVIQRLE 246

Query: 167 VPVDLRI 173
                RI
Sbjct: 247 KVSGQRI 253


>gi|296444538|ref|ZP_06886502.1| lytic murein transglycosylase [Methylosinus trichosporium OB3b]
 gi|296257806|gb|EFH04869.1| lytic murein transglycosylase [Methylosinus trichosporium OB3b]
          Length = 392

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 23/76 (30%), Gaps = 7/76 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP         G S    + ++  L   G                  A+  FQ R G
Sbjct: 322 QGAWPTDD-----PGLSRAERREVQALLSRHGY--EVGEPDGVIGTRTMQAIADFQGRAG 374

Query: 151 LDPSGMVDSSTLEAMN 166
           +   G     TL A+ 
Sbjct: 375 MRADGRAGRKTLNALR 390


>gi|312114874|ref|YP_004012470.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220003|gb|ADP71371.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodomicrobium vannielii ATCC
           17100]
          Length = 139

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 5/48 (10%)

Query: 314 EFYSRNNTYMHDTPEPIL---FNNVVRFETSGCVRV--RNIIDLDVWL 356
                 + + H            N+ R  + GC+R+   +  +L   +
Sbjct: 80  NSPMPYSIFFHGGYAIHGSYDIGNLGRPVSHGCIRLHPEDARELYGLV 127


>gi|150396530|ref|YP_001326997.1| peptidoglycan binding domain-containing protein [Sinorhizobium
           medicae WSM419]
 gi|150028045|gb|ABR60162.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae
           WSM419]
          Length = 307

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 3/69 (4%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTL 162
                  V+  +E L   G       +          A+  +Q  H  L+  G++  +TL
Sbjct: 178 PRKPDALVKEAQEILTSKGF--NPGAIDGWMGEKTRDAIIAYQKAHPHLEADGILGPATL 235

Query: 163 EAMNVPVDL 171
             +      
Sbjct: 236 SQLRRDAKA 244


>gi|302551078|ref|ZP_07303420.1| peptidoglycan-binding membrane protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302468696|gb|EFL31789.1| peptidoglycan-binding membrane protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 319

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 4/74 (5%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L LG+    V  L+    +       +     +D  +E AV+ +Q   G+     G+  
Sbjct: 248 TLRLGDRGPEVTELQL--RLRQLSLYVEDDDGTYDEGLEDAVRTYQWSRGIQDDDLGVYG 305

Query: 159 SSTLEAMNVPVDLR 172
             T   +       
Sbjct: 306 RGTRTRLESETKEP 319


>gi|47215834|emb|CAG00689.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 618

 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +        +   + SAV   Q  +GL+ +G +D  T+ AM  P     D 
Sbjct: 4   LRMYGYLPQASRQMSTMRSAQILSSAVSDMQRFYGLEVTGKMDPETISAMKRPRCGVPDK 63

Query: 172 RIRQLQVNLMRIK 184
              Q++ N+ R +
Sbjct: 64  FGGQIKTNVRRKR 76


>gi|307138337|ref|ZP_07497693.1| hypothetical protein EcolH7_09430 [Escherichia coli H736]
 gi|331642276|ref|ZP_08343411.1| putative LysM domain protein [Escherichia coli H736]
 gi|331039074|gb|EGI11294.1| putative LysM domain protein [Escherichia coli H736]
          Length = 177

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 36/125 (28%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                I Q+ +                                               G 
Sbjct: 148 TPTAGIRQRSL-----------------------------------ERGIKLPPVVPAGP 172

Query: 305 INAMA 309
            N + 
Sbjct: 173 NNPLG 177


>gi|90418209|ref|ZP_01226121.1| putative N-acetylmuramoyl-L-alanine amidase [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337881|gb|EAS51532.1| putative N-acetylmuramoyl-L-alanine amidase [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 262

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 37/112 (33%), Gaps = 19/112 (16%)

Query: 68  PIISKETIAQTEKAIAFYQDILSRGGWPE---------LPIRPLH------LGNSSVSVQ 112
           PI  +  +A ++ A A   D   +  W +         +   PL       LG+    V 
Sbjct: 130 PIRPEFVLAHSDVAPARKSDPGEKFPWLQLFSAGIGHAVDPAPLRGGRYFSLGDRGEPVA 189

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSSTLE 163
             +  L   G           FD     A   FQ     +   G+ D+ST+E
Sbjct: 190 AYQSLLAAYGY---GVPCDGTFDDTTRQATVAFQRHFRQERVDGIADASTIE 238


>gi|164687240|ref|ZP_02211268.1| hypothetical protein CLOBAR_00881 [Clostridium bartlettii DSM
           16795]
 gi|164603664|gb|EDQ97129.1| hypothetical protein CLOBAR_00881 [Clostridium bartlettii DSM
           16795]
          Length = 370

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L  G+  + V++++++L +      SK           S +K FQ ++GL  +G VD  T
Sbjct: 150 LKKGSMGLKVRKVQQKLGM------SKTYKAIVGPVTISKIKAFQKKNGLKQTGEVDYKT 203

Query: 162 LEAMNVPVDL 171
            + M +  D 
Sbjct: 204 WKKMGLSDDD 213


>gi|121592469|ref|YP_984365.1| peptidoglycan-binding domain-containing protein [Acidovorax sp.
           JS42]
 gi|120604549|gb|ABM40289.1| Peptidoglycan-binding domain 1 protein [Acidovorax sp. JS42]
          Length = 346

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+  +E L   G    +   S         A++ FQ   GL  +G +D++T  A++ 
Sbjct: 292 VREAQESLNAMGYNVGTPDGSA--GPKTAKALREFQQSQGLPVTGRLDTATAGALSR 346


>gi|163852214|ref|YP_001640257.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163663819|gb|ABY31186.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 214

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 12/71 (16%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T        + R  + GCVR+  RN   L   + +
Sbjct: 77  FSREWDNAPMPHAIFFTQVGHAIHGTTHTR---RLGRAASHGCVRLSQRNAATLFTLVKQ 133

Query: 359 DTPTWSRYHIE 369
                +R  IE
Sbjct: 134 QKMANTRVVIE 144


>gi|82702355|ref|YP_411921.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
 gi|82410420|gb|ABB74529.1| ErfK/YbiS/YcfS/YnhG [Nitrosospira multiformis ATCC 25196]
          Length = 159

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 41/181 (22%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ-------TPILHSRINRIM----FNPYW 244
           + V IP+ +L+  +   V  R  +   +           TP+    I   +         
Sbjct: 3   IEVGIPSQTLDLHDKNAVVRRYRISSAKNGVGQENGSFCTPLGRHIIRAKIGTDQPVNTV 62

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            + R    +        +       +  +            + W S   P F        
Sbjct: 63  FVKRRPTGEIYTPEFAAN---FPRRDWILTR----------ILWLSGCEPGF-------- 101

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPT 362
            N +         R   Y+H TP+ +         + GC+R+RN    +L   +   T  
Sbjct: 102 -NRLGKVDTM---RRYIYIHGTPDSVEMGKPG---SIGCIRMRNQDLLELFDLVEAGTEV 154

Query: 363 W 363
            
Sbjct: 155 D 155


>gi|329929360|ref|ZP_08283108.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
 gi|328936447|gb|EGG32892.1| ErfK/YbiS/YcfS/YnhG [Paenibacillus sp. HGF5]
          Length = 468

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/233 (9%), Positives = 58/233 (24%), Gaps = 24/233 (10%)

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
             +   G      V+++ L+        R  +L  +L  + +                  
Sbjct: 221 RLKRSAGQWADLQVETAVLQEAAKQYKARHGRLPKSLDELTQPYPNNWLSGRSKAMEQMF 280

Query: 204 SLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDP 263
                +  +          +    T            +P++  P  +I       L    
Sbjct: 281 ETLMQQQSQGAGGQGQAGQQPGNSTEEPGYWGTSPSGDPFFEQPLQVIIDRKRHRLAVVS 340

Query: 264 QYLKDNNIHMIDEKGKE------VFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             +   N  +     K       +  + V+ N      +             +  ++   
Sbjct: 341 GGILLRNYEVGLGGAKTPLGDFHINDKVVNPNGTTKGPY------------GTRGMQLSD 388

Query: 318 RNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTPTWSRYHI 368
                +H T +           + GC+R+   ++ +L   +   T    R  +
Sbjct: 389 T-LYAIHGTLDMDSIGANE---SEGCIRMLTEDVEELFDLVPMGTAVKIREGV 437


>gi|294944769|ref|XP_002784421.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239897455|gb|EER16217.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1445

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 20/42 (47%)

Query: 136  AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
                 A+K FQ  H L   G +D  T + +   ++ R ++++
Sbjct: 1012 PGTVDAIKGFQEYHSLPVDGNMDDRTWQLLVDSLETRRQKIE 1053


>gi|220934434|ref|YP_002513333.1| ErfK/YbiS/YcfS/YnhG family protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995744|gb|ACL72346.1| ErfK/YbiS/YcfS/YnhG family protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 220

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNI--IDLDVWLLKDT 360
            Y+H T E  L        + GCVR+ N   I+L   +   T
Sbjct: 176 IYIHGTDEEGLIGQP---ASDGCVRMTNAAVIELFDQVPLGT 214


>gi|114705232|ref|ZP_01438140.1| hypothetical protein FP2506_09846 [Fulvimarina pelagi HTCC2506]
 gi|114540017|gb|EAU43137.1| hypothetical protein FP2506_09846 [Fulvimarina pelagi HTCC2506]
          Length = 143

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYHIEE 370
              +H T      + + R  + GCVR+   N       + +     +R  ++ 
Sbjct: 94  GYAIHGT---GAISRLGRPASHGCVRLHPANAKAFYNLVRRHGMGNTRVVVQR 143


>gi|15891172|ref|NP_356844.1| lytic murein transglycosylase [Agrobacterium tumefaciens str. C58]
 gi|15159526|gb|AAK89629.1| lytic murein transglycosylase [Agrobacterium tumefaciens str. C58]
          Length = 406

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 11/84 (13%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           +I   GG    WP  P   L +         L+ R+   G  D    +   F +  ++A+
Sbjct: 329 EIAGYGGMQQKWPR-PDGTLDIREK----FELQTRMKELGYYDGE--IDGNFGSGSKAAI 381

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMN 166
              Q R G+   G      L A+ 
Sbjct: 382 SAIQSRMGMQNDGEPSQRLLRALR 405


>gi|328544242|ref|YP_004304351.1| ErfK/YbiS/YcfS/YnhG [polymorphum gilvum SL003B-26A1]
 gi|326413984|gb|ADZ71047.1| ErfK/YbiS/YcfS/YnhG [Polymorphum gilvum SL003B-26A1]
          Length = 141

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 20/107 (18%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF-----YSRNN 320
           L D  + +    G+ V    V            R  P +   +A               +
Sbjct: 31  LSDQEMQV-SVGGRLVHTWPVSTARRGYRTPTGRYRPTR---LARVWYSTIYDYAPMPYS 86

Query: 321 TY------MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKD 359
            +      +H T E     N+ R  + GCVR+   N   L   +  +
Sbjct: 87  IFFKGGYAIHGTTE---IRNLGRPASHGCVRLHPDNARALFELIEAN 130


>gi|298249255|ref|ZP_06973059.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297547259|gb|EFH81126.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 202

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +   F    + AV  FQ  +GLDP G+V   T  A+ 
Sbjct: 163 AVDGQFGVLTQQAVFDFQDYYGLDPDGIVGPRTWHALG 200


>gi|84684732|ref|ZP_01012632.1| hypothetical protein 1099457000245_RB2654_02449 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667067|gb|EAQ13537.1| hypothetical protein RB2654_02449 [Rhodobacterales bacterium
           HTCC2654]
          Length = 222

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 10/164 (6%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKV-GLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPR 248
            +   Y  +      + AVE G V        V       P     ++      Y+V   
Sbjct: 30  PLPDFYGPITDEPYPIPAVEEGVVHPSLWRQEVANPWPNRPRGTIVVDPNEARLYFVDTP 89

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQ---DPGKI 305
               +  +++      +     +    +  +    + +    PE   + +R+   +PG  
Sbjct: 90  ETATRYGVSVGAAGFAWAGIARLQFWRDWPRWKVPDAMIERKPELAQYSWRKGGMEPGPG 149

Query: 306 NAMASTKIEFYSR--NNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           N M +  +  +    +  Y +H               +SGC+R+
Sbjct: 150 NPMGARALYLFDDGVDTLYRIHGDASARELGQ---AVSSGCIRM 190


>gi|219848318|ref|YP_002462751.1| peptidoglycan-binding domain 1 protein [Chloroflexus aggregans DSM
           9485]
 gi|219542577|gb|ACL24315.1| Peptidoglycan-binding domain 1 protein [Chloroflexus aggregans DSM
           9485]
          Length = 478

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G+  +  +P +      +V  L+ RL   G       +   F     +AV+ F++  GL 
Sbjct: 401 GFATISPQPANHRQFDPAVADLQGRLATLGF--DPGPIDGLFGPTTATAVQAFRIATGLP 458

Query: 153 PSGMVD 158
               +D
Sbjct: 459 AGDSID 464


>gi|310826913|ref|YP_003959270.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
 gi|308738647|gb|ADO36307.1| Peptidoglycan-binding lysin domain protein [Eubacterium limosum
           KIST612]
          Length = 331

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            + +++E L   G       +         +A+K FQ ++GL+  G+    T  A+ +
Sbjct: 277 EIAQIQETLKRQGY---DIAIDGGAGPISIAALKDFQTKNGLEADGICGDLTRAALGI 331


>gi|255541150|ref|XP_002511639.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
 gi|223548819|gb|EEF50308.1| Metalloendoproteinase 1 precursor, putative [Ricinus communis]
          Length = 363

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
             G+    + +L+      G L       ++  FD  +ESAV  +Q + GL  +G +D +
Sbjct: 59  RRGSHVSGMSQLKRYFHHFGYLPLRDFDNITDTFDVPLESAVFRYQAKLGLPITGELDFN 118

Query: 161 TLEAMNVP 168
           T+  +  P
Sbjct: 119 TVSQLMAP 126


>gi|213616032|ref|ZP_03371858.1| hypothetical protein SentesTyp_16804 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 75

 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 4/37 (10%)

Query: 313 IEFYSRNNTYM-HDTPEPILFNNVVRFETSGCVRVRN 348
           +   +    Y+ H T     F   +R  +SGC+R+R+
Sbjct: 1   MRLAAYGGVYLLHGTNA--GFGIGMR-VSSGCIRLRD 34


>gi|16077289|ref|NP_388102.1| pepdidoglycan binding protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308033|ref|ZP_03589880.1| hypothetical protein Bsubs1_01223 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312356|ref|ZP_03594161.1| hypothetical protein BsubsN3_01226 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317289|ref|ZP_03598583.1| hypothetical protein BsubsJ_01228 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321553|ref|ZP_03602847.1| hypothetical protein BsubsS_01249 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81555893|sp|O31447|YBFG_BACSU RecName: Full=Uncharacterized protein ybfG
 gi|2632506|emb|CAB12014.1| putative pepdidoglycan binding protein [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|3599642|dbj|BAA33117.1| ybfG [Bacillus subtilis]
          Length = 732

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)

Query: 101 PLHLGNSSVS-VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
            L  G+S    V  ++  L  +G           +   V SAVK FQ    L  +G  D 
Sbjct: 211 TLTPGDSRTGFVLIVQYALYCNGKSFDPGEFDGKYGVGVVSAVKAFQEFMCLPQTGYADM 270

Query: 160 STLEAMNVPVDL 171
            T++A+      
Sbjct: 271 PTIKALLSSSGD 282



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA-------- 164
           L+  L   G      G +  F    E+AVK FQ   GL    G+V +  ++A        
Sbjct: 84  LQGALWCKGF--NPGGFTGVFYEKTENAVKEFQKAAGLTTQDGIVTTLIMKALLDMSAFK 141

Query: 165 MNVPVDLRIRQLQVNLMR 182
           +    D RIRQ+Q NL R
Sbjct: 142 LVSGGDSRIRQIQQNLNR 159


>gi|301627877|ref|XP_002943093.1| PREDICTED: matrix metalloproteinase-17, partial [Xenopus (Silurana)
           tropicalis]
          Length = 518

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P    S        +  AVK  Q   GL  +G +D +T+  MN P       
Sbjct: 3   LTRYGYLPPPDPFSARQQTLEGLREAVKAMQRVAGLPETGELDDATVRMMNKPRCSLPDI 62

Query: 176 LQVNLMRIK 184
           +     R +
Sbjct: 63  IMRPEGRSR 71


>gi|260683966|ref|YP_003215251.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile CD196]
 gi|260687626|ref|YP_003218760.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile R20291]
 gi|260210129|emb|CBA64277.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile CD196]
 gi|260213643|emb|CBE05474.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile R20291]
          Length = 175

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            S      F     +AVK  Q R GL   G+V  ST +A   
Sbjct: 132 SSIDDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDAAGR 173


>gi|254975977|ref|ZP_05272449.1| hypothetical protein CdifQC_11719 [Clostridium difficile QCD-66c26]
 gi|255093365|ref|ZP_05322843.1| hypothetical protein CdifC_12004 [Clostridium difficile CIP 107932]
 gi|255101545|ref|ZP_05330522.1| hypothetical protein CdifQCD-6_12099 [Clostridium difficile
           QCD-63q42]
 gi|255315110|ref|ZP_05356693.1| hypothetical protein CdifQCD-7_12197 [Clostridium difficile
           QCD-76w55]
 gi|255517780|ref|ZP_05385456.1| hypothetical protein CdifQCD-_11761 [Clostridium difficile
           QCD-97b34]
 gi|255650895|ref|ZP_05397797.1| hypothetical protein CdifQCD_11961 [Clostridium difficile
           QCD-37x79]
 gi|306520782|ref|ZP_07407129.1| putative peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile QCD-32g58]
          Length = 195

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            S      F     +AVK  Q R GL   G+V  ST +A   
Sbjct: 152 SSIDDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDAAGR 193


>gi|294139662|ref|YP_003555640.1| general secretion pathway protein A [Shewanella violacea DSS12]
 gi|293326131|dbj|BAJ00862.1| general secretion pathway protein A [Shewanella violacea DSS12]
          Length = 531

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   +  +  G++   +Q L   L        +  L   FD+ +E+ +K FQ +HGL   
Sbjct: 445 PTDQLGEIDKGSAQSQIQWLENSLAQVD--SRTPRLLNDFDSQLETKLKHFQRQHGLRAD 502

Query: 155 GMVDSSTLEAMN 166
            +  S TL  +N
Sbjct: 503 AIAGSQTLVQLN 514


>gi|146339385|ref|YP_001204433.1| hypothetical protein BRADO2369 [Bradyrhizobium sp. ORS278]
 gi|146192191|emb|CAL76196.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 453

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 12/67 (17%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N   +H  P P          + GCVR+         L   T  W    +  ++      
Sbjct: 67  NGVALHGGPLPGY------AASHGCVRM--PYGFAEKLFDRT--WIGMRV--IIAPGDPV 114

Query: 379 PVKLATE 385
           PV+ +  
Sbjct: 115 PVEFSHP 121


>gi|148653769|ref|YP_001280862.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
 gi|148572853|gb|ABQ94912.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
          Length = 486

 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 20/57 (35%), Gaps = 2/57 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            G S    + L++ L + G       +          A++ +Q  +GL P G     
Sbjct: 351 PGLSRKQSRELQQALNLLGY--DIGEVDGIIGDGTRRAIQQYQTDNGLTPDGRAGKK 405


>gi|188581913|ref|YP_001925358.1| peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
 gi|179345411|gb|ACB80823.1| Peptidoglycan-binding domain 1 protein [Methylobacterium populi
           BJ001]
          Length = 224

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVDSSTLEAMNVPV 169
           ++++E L+  G      G           A+ LFQ    L+    G +   T+ A+ +  
Sbjct: 4   KQIQEALLARGHDLGPTGADGVLGRRTIEAITLFQKAEKLEIRFPGTIGPKTIAALGISA 63

Query: 170 DLRIRQ 175
              +  
Sbjct: 64  AEPMAP 69


>gi|297850892|ref|XP_002893327.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339169|gb|EFH69586.1| hypothetical protein ARALYDRAFT_889959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 387

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     + +L++     G +     S   +  FD  +++AV+++Q    L+ +G++D  T
Sbjct: 55  GKKYDGLYKLKQYFQHFGYIPETDLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELT 114

Query: 162 LEAMNVP 168
           L+ + +P
Sbjct: 115 LKHVVIP 121


>gi|156741206|ref|YP_001431335.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156232534|gb|ABU57317.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 413

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 69/244 (28%), Gaps = 37/244 (15%)

Query: 142 VKLFQMRHGLDPSGM-VDSSTLEAMNVPVDLRIRQLQVNLMRIKK-LLEQKMGLRYVLVN 199
           +K +Q R GL   G  +     E   +   +RI Q      R +     +K+   Y  + 
Sbjct: 188 LKFWQKRGGLRIFGYPISEPFEEISPIDGQVRITQY---FERARFEYHPEKLPAFYRQME 244

Query: 200 IPA-------ASLEAVENGKVGL--------RSTVIVGRVDRQTPILHSRINRIMFNPYW 244
                       ++  + G+  +         +  + G     + +   RI   +     
Sbjct: 245 RANGIMLAGLYEVQLTDLGRQAMQRRGHTPQSTGPMPGAPVWSSALFERRIEVNLSTQML 304

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
                   +    + R  P     +  +             +   +       +      
Sbjct: 305 T-----AFEGEAPVYRA-PVATGRDGFNTPVGTFAVYSKLPIQTMTGSAGGESWYVPDIP 358

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWS 364
                   +++       +H T     +   VR  + GC+ + NI D   WL + T   +
Sbjct: 359 -------WVQYVVG-GVALHGTYWHDAWGTGVRM-SHGCINL-NIDD-AEWLYRWTDIGT 407

Query: 365 RYHI 368
           R  I
Sbjct: 408 RVDI 411


>gi|114765851|ref|ZP_01444944.1| hypothetical protein 1100011001323_R2601_11144 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541850|gb|EAU44887.1| hypothetical protein R2601_11144 [Roseovarius sp. HTCC2601]
          Length = 391

 Score = 41.9 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            G S   +  L+  L   G      G+     A   SAV+  Q R GL   G
Sbjct: 332 PGLSGEQMLALQRALDAKGY--DVGGIDGILGAGTRSAVRDMQARLGLPADG 381


>gi|269126589|ref|YP_003299959.1| glycoside hydrolase family 25 [Thermomonospora curvata DSM 43183]
 gi|268311547|gb|ACY97921.1| glycoside hydrolase family 25 [Thermomonospora curvata DSM 43183]
          Length = 297

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 19/64 (29%), Gaps = 3/64 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                V+R + R+   G           +    E   + FQ   GL   G+V   T  A 
Sbjct: 235 MHGQDVRRWQARMRERG---WRIAADGWYGPASERVCRAFQAEKGLAVDGVVGPVTWRAA 291

Query: 166 NVPV 169
               
Sbjct: 292 WEAP 295


>gi|254442802|ref|ZP_05056278.1| ErfK/YbiS/YcfS/YnhG superfamily [Verrucomicrobiae bacterium DG1235]
 gi|198257110|gb|EDY81418.1| ErfK/YbiS/YcfS/YnhG superfamily [Verrucomicrobiae bacterium DG1235]
          Length = 178

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 15/59 (25%)

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
           Q PG+             +   Y+H T       +     ++GCV++RN    +L   +
Sbjct: 124 QGPGRD----------SYQRYIYIHGTNHEEKIGSP---ASAGCVQLRNAEMIELFDAV 169


>gi|86749899|ref|YP_486395.1| hypothetical protein RPB_2782 [Rhodopseudomonas palustris HaA2]
 gi|86572927|gb|ABD07484.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 503

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 12/67 (17%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N   +H  P P          + GCVR+         L   T    R  +  +V  + T 
Sbjct: 114 NGIALHGGPLPGY------AASHGCVRM--PYGFAETLFDRT----RIGMRVIVSPQDTA 161

Query: 379 PVKLATE 385
           PV ++  
Sbjct: 162 PVDISHP 168


>gi|332206790|ref|XP_003252478.1| PREDICTED: matrix metalloproteinase-19 [Nomascus leucogenys]
          Length = 503

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER-----LIISGDLDPSKGLSVAFDAY-VESAVKLFQM 147
           WP+L +  L     S  V  L E      L   G L      S  F    +  A++ FQ 
Sbjct: 3   WPQLWLGFLLPMTVSGRVLGLAEVAAVDYLSQYGYLQKPLEGSNNFKPEDITEALRAFQE 62

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  SG +D +T   M  P
Sbjct: 63  ASELPVSGQLDDATRARMRQP 83


>gi|213691418|ref|YP_002322004.1| Peptidoglycan-binding domain 1 protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213522879|gb|ACJ51626.1| Peptidoglycan-binding domain 1 protein [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|320457489|dbj|BAJ68110.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 350

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 7/102 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLE 163
           G++   V  L++ L   G    +   +  +    +  V     + G  +P G +  + + 
Sbjct: 119 GDTGPDVLALQQELARLGY---NAEGNGTYGWRTKDGVNQLLSQAGDRNPDGRIGPTDVA 175

Query: 164 AMNVPVDLRIRQ---LQVNLMRIKKLLEQKMGLRYVLVNIPA 202
            +        +    L  NL    ++++    L  +    PA
Sbjct: 176 WLPQTTATPTQCTAGLNTNLTDGAEIMKTGGQLTAITFPTPA 217


>gi|240139544|ref|YP_002964020.1| hypothetical protein MexAM1_META1p2995 [Methylobacterium extorquens
           AM1]
 gi|240009517|gb|ACS40743.1| Conserved hypothetical protein; putative exported protein, putative
           ErfK/YbiS/YcfS/YnhG domain [Methylobacterium extorquens
           AM1]
          Length = 211

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 12/71 (16%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T        + R  + GCVR+  RN   L   + +
Sbjct: 74  FSREWDNAPMPHAIFFTQVGHAIHGTTHTR---RLGRAASHGCVRLSQRNAATLFSLVKQ 130

Query: 359 DTPTWSRYHIE 369
                +R  IE
Sbjct: 131 QKMANTRVVIE 141


>gi|148263549|ref|YP_001230255.1| peptidoglycan binding domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146397049|gb|ABQ25682.1| Peptidoglycan-binding domain 1 protein [Geobacter uraniireducens
           Rf4]
          Length = 536

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            +  G+S   V RL++ L  +G       L+  FDA  ++A+K +++  G++ S  V   
Sbjct: 454 TISAGSSGWRVSRLQQLLAGAGFYKIR--LNGVFDAATQNALKQYRLARGIEQSDRVGEL 511

Query: 161 TL 162
           TL
Sbjct: 512 TL 513


>gi|227515313|ref|ZP_03945362.1| cell surface protein [Lactobacillus fermentum ATCC 14931]
 gi|227086327|gb|EEI21639.1| cell surface protein [Lactobacillus fermentum ATCC 14931]
          Length = 199

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 43/145 (29%), Gaps = 20/145 (13%)

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMID-----EKGKEVF 282
           ++ + I+    +     P      D+   +  ++   YL DN   +         GK   
Sbjct: 48  VMRTPIDWQKSSETVAYPDVNAHPDLWIKVSKKKQRVYLIDNGKILYTMYCSTGTGKNDT 107

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN--------N 334
                +   E   + + Q  G+    A   + + +      H  P     N         
Sbjct: 108 PTGTYYIQAERGTYFYSQQSGEG---AHYWVSWLNHGEYLFHSVPTDESGNYKLSEAKQL 164

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKD 359
             +  + GCVR+        W  ++
Sbjct: 165 GKKAASHGCVRLSVPD--AKWFYEN 187


>gi|329888601|ref|ZP_08267199.1| phage lysozyme family protein [Brevundimonas diminuta ATCC 11568]
 gi|328847157|gb|EGF96719.1| phage lysozyme family protein [Brevundimonas diminuta ATCC 11568]
          Length = 206

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 23/165 (13%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P  P   L   +    +  L +     G L  +       D  + +A+K      GL   
Sbjct: 12  PHAPGGKLKP-DWVPMIDALAD---AMG-LPRAADAPGDPDPELIAALK---KDEGLR-- 61

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG-LRYVLVNIPAASLEAVENGKV 213
                  L+A   P+  R R  + +         +  G     ++    A    +E+ + 
Sbjct: 62  -------LKAYPDPLSPRARTGKGSGAPWTIGYGRARGIQEGQVITEATAEAWLIEDARE 114

Query: 214 GLRSTVIVGRVDR---QTPILHSRINRIMFNPYWVIPRSIIQKDM 255
              + VI   +       P+    I  + FN  W  P++  ++ +
Sbjct: 115 --HNRVIHAALPWLKRLDPVRRRVIENMHFNMGWDDPKTPQREGL 157


>gi|320094135|ref|ZP_08025948.1| hypothetical protein HMPREF9005_0560 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978937|gb|EFW10467.1| hypothetical protein HMPREF9005_0560 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 372

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 100 RPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           R      S    V +L   L   G        +  +D    +A++ +Q   GL  +G++
Sbjct: 112 RAFEPDMSNGDDVTQLETALKELGYFTGEP--NTHYDWLTRAAIQKWQKDKGLTQNGIL 168


>gi|74316079|ref|YP_313819.1| lytic murein transglycosylase [Thiobacillus denitrificans ATCC
           25259]
 gi|74055574|gb|AAZ96014.1| lytic murein transglycosylase [Thiobacillus denitrificans ATCC
           25259]
          Length = 434

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           T+AQ  + +A    ++     P +    L L      V+ L++ L   G    +      
Sbjct: 326 TVAQLAQQLADGDGLVH----PAVEEAALSLVQ----VKLLQQALNELGF--DAGEPDGV 375

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                ++A++ +Q+ H L   G   S+ +  +   
Sbjct: 376 LGPQTQAALRRYQVVHALPADGYPGSAVMAHVART 410


>gi|310825599|ref|YP_003957957.1| peptidoglycan binding-like protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398671|gb|ADO76130.1| Peptidoglycan binding-like protein [Stigmatella aurantiaca DW4/3-1]
          Length = 538

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 17/73 (23%)

Query: 104 LGNSSVSVQR----LRERLIISGDLDPSKGLSVAFDAY------------VESAVKLFQM 147
           +G    +V      +++RL   G L      +   D                 A++ FQ 
Sbjct: 145 VGARGANVPADVRQVQDRLHELGFLSDEAYTAEQADPAQTEAVAEAAMPQTIEAIREFQR 204

Query: 148 R-HGLDPSGMVDS 159
              G+ P G V  
Sbjct: 205 EVAGITPDGNVGP 217


>gi|291409995|ref|XP_002721290.1| PREDICTED: matrix metalloproteinase 21 [Oryctolagus cuniculus]
          Length = 574

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIKKLLEQK 190
            A +  AV+ FQ  + L  SG +D++TL AMN P     D R+                 
Sbjct: 81  GAALAEAVRRFQQVNALPASGELDAATLAAMNRPRCGVPDTRLPPPAAPTTLPPWGSPSP 140

Query: 191 MG 192
           +G
Sbjct: 141 LG 142


>gi|213028701|ref|ZP_03343148.1| hypothetical protein Salmonelentericaenterica_43278 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 113

 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHI 368
           H T     F   +R  + GCVR+RN  D+  +L ++ P  +R   
Sbjct: 1   HGTNAN--FGIGLR-VSHGCVRLRN-DDI-KFLFENVPVGTRVQF 40


>gi|321471531|gb|EFX82503.1| hypothetical protein DAPPUDRAFT_316218 [Daphnia pulex]
          Length = 550

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 9/75 (12%)

Query: 118 LIISGDLDPSKGLSVAFDAYV-----ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---V 169
           L   G L+       ++   V      SA++ FQ   GL+ +G +D  TLE M+ P   V
Sbjct: 83  LERFGYLER-GPQDSSYSESVSAESFRSAIEDFQSFAGLNKTGEIDKETLELMSKPRCGV 141

Query: 170 DLRIRQLQVNLMRIK 184
             R+R    +  R +
Sbjct: 142 ADRVRPGHSSTRRKR 156


>gi|256852003|ref|ZP_05557390.1| periplasmic protease [Lactobacillus jensenii 27-2-CHN]
 gi|260661428|ref|ZP_05862341.1| periplasmic protease [Lactobacillus jensenii 115-3-CHN]
 gi|256615415|gb|EEU20605.1| periplasmic protease [Lactobacillus jensenii 27-2-CHN]
 gi|260547883|gb|EEX23860.1| periplasmic protease [Lactobacillus jensenii 115-3-CHN]
          Length = 341

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQ--RLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           Y  +      P +     +LG +   V+   +  RL   G           ++    +AV
Sbjct: 102 YYQVQYNQIQPSIYAPGYNLGYNYEGVKTWLVMRRL---GTYAGYAN----YNWATVNAV 154

Query: 143 KLFQMRHGLDPSGMVDSSTL 162
           K FQ  HGL+P+G+VD +T 
Sbjct: 155 KNFQASHGLNPTGIVDLATW 174


>gi|254491768|ref|ZP_05104947.1| ErfK/YbiS/YcfS/YnhG superfamily [Methylophaga thiooxidans DMS010]
 gi|224463246|gb|EEF79516.1| ErfK/YbiS/YcfS/YnhG superfamily [Methylophaga thiooxydans DMS010]
          Length = 165

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 7/58 (12%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
            N + +       R   Y+H  P+ +         + GC+R+ N  DL     +  P 
Sbjct: 108 KNRLGNVDTM---RRYIYIHGCPDALPMGQ---ALSHGCIRMHN-RDLLTLFEQVKPG 158


>gi|291237328|ref|XP_002738587.1| PREDICTED: matrix metalloproteinase 19 isoform rasi-1
           preproprotein-like [Saccoglossus kowalevskii]
          Length = 525

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L   K      D    +AV+ FQ    L+ +G +D  T+  M  P
Sbjct: 48  LEKFGYLKKLKEGVQHDDKSTNAAVRAFQRMANLEETGNMDEKTIAMMQAP 98


>gi|317406972|gb|EFV87017.1| hypothetical protein HMPREF0005_05881 [Achromobacter xylosoxidans
           C54]
          Length = 383

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S   ++ ++E L   G             A    AV+  Q +  L   G V     +
Sbjct: 321 PGLSRAQIKEVQEMLNARGY--DVGTADGIPGAKTRDAVRAEQEKRNLPQDGRVGKRIYD 378

Query: 164 AMNV 167
           A+  
Sbjct: 379 ALKA 382


>gi|328541951|ref|YP_004302060.1| ErfK/YbiS/YcfS/YnhG family protein [polymorphum gilvum SL003B-26A1]
 gi|326411701|gb|ADZ68764.1| ErfK/YbiS/YcfS/YnhG family protein [Polymorphum gilvum SL003B-26A1]
          Length = 144

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 16/46 (34%), Gaps = 5/46 (10%)

Query: 316 YSRNNTYMHDTPE---PILFNNVVRFETSGCVRVR--NIIDLDVWL 356
              ++ + H            ++ R  + GCVR+   N   L   +
Sbjct: 85  PMPHSVFFHGGYAIHGTDAIKSLGRPASHGCVRLHPDNARALFTLI 130


>gi|310817038|ref|YP_003965002.1| membrane-bound lytic murein transglycosylase B [Ketogulonicigenium
           vulgare Y25]
 gi|308755773|gb|ADO43702.1| membrane-bound lytic murein transglycosylase B [Ketogulonicigenium
           vulgare Y25]
          Length = 419

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +L+ERL  +G    + G      +   +A++ +Q  +GL   G    S LE + 
Sbjct: 368 QLQERLTRAGY--NTGGADGILGSNSLNAIRAYQRANGLTADGYPSRSLLERLR 419


>gi|113477723|ref|YP_723784.1| OpcA protein [Trichodesmium erythraeum IMS101]
 gi|110168771|gb|ABG53311.1| OpcA protein [Trichodesmium erythraeum IMS101]
          Length = 445

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE----AMNVPVD 170
           ++ L   G    +  +         +AVK  Q  + L  +G VD  TL           +
Sbjct: 56  QQLLGGLGFY--NGPIDGIHGPETRNAVKEAQKAYKLTITGRVDPKTLAKLREEFAKKPE 113

Query: 171 LRIRQLQVNL 180
              +   VNL
Sbjct: 114 DSQKITNVNL 123


>gi|196231513|ref|ZP_03130371.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196224366|gb|EDY18878.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 268

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/169 (11%), Positives = 43/169 (25%), Gaps = 28/169 (16%)

Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
             K     + +++P   +   E+G    R  +   +                        
Sbjct: 22  ATKPNPHLIRISVPDQKMVLFEHGVEIARYDISTSKFGVGDRPGSYA----------TPL 71

Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
             +  ++ +   +      K+         G+ V       +         R      N 
Sbjct: 72  GEMEVREKIGSGQPSGMKFKNR-----RPTGEIVRPNTPGRDPIVSRILWLRGLE-PQN- 124

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
                 +     + Y+H T E           + GC+R+   ++I L  
Sbjct: 125 --HRAFD----RDIYIHGTAEEWSIGTP---ASYGCIRMRSHDVIQLFD 164


>gi|327277063|ref|XP_003223285.1| PREDICTED: matrix metalloproteinase-19-like [Anolis carolinensis]
          Length = 475

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 106 NSSVSVQRLRER-----LIISGDLDPSKGL-SVAFDAY-VESAVKLFQMRHGLDPSGMVD 158
               +V RL E+     L+  G L       S  F    +E A++ FQ+  GL  +G VD
Sbjct: 19  AKGAAVTRLEEKEALDYLLQFGYLQKPLEQFSNNFTEEEIEEALRSFQLASGLPVTGRVD 78

Query: 159 SSTLEAMNVP 168
            +TL  M  P
Sbjct: 79  VATLSQMRQP 88


>gi|284051018|ref|ZP_06381228.1| histidine kinase [Arthrospira platensis str. Paraca]
          Length = 264

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S ++  ++  L   G    +  +   +    E+A++  Q  +GL  +G  D +TL+ +  
Sbjct: 196 SDNIIAIQTLLANGGFY--NGSIDNIWGVETETAIQDAQNAYGLPVTGQPDRATLQQLVQ 253

Query: 168 P 168
            
Sbjct: 254 S 254


>gi|126740201|ref|ZP_01755890.1| peptidoglycan-binding protein, putative [Roseobacter sp. SK209-2-6]
 gi|126718656|gb|EBA15369.1| peptidoglycan-binding protein, putative [Roseobacter sp. SK209-2-6]
          Length = 382

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               +  L+ RL   G    + G         ++A++ +Q   GL  +G      L  + 
Sbjct: 326 KDDRI-ALQRRLTAKGF--DTGGADGVLGPNSQAAIRAYQSSIGLPATGQPSPELLRRLG 382


>gi|85714730|ref|ZP_01045717.1| hypothetical protein NB311A_21146 [Nitrobacter sp. Nb-311A]
 gi|85698615|gb|EAQ36485.1| hypothetical protein NB311A_21146 [Nitrobacter sp. Nb-311A]
          Length = 462

 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++ ++  LI  G L         +      A+ ++Q + G+  +G +D  T+ ++ + 
Sbjct: 294 EDIRVIQRVLIDRGLLHGDA--DGVWGPATREAITVYQRQQGIAVTGTIDMRTVSSLGIS 351


>gi|323492329|ref|ZP_08097482.1| hypothetical protein VIBR0546_10844 [Vibrio brasiliensis LMG 20546]
 gi|323313376|gb|EGA66487.1| hypothetical protein VIBR0546_10844 [Vibrio brasiliensis LMG 20546]
          Length = 447

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 11/73 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG---------- 150
               G     V+ +++ LI  G    + G    F    +  V+ FQ  +           
Sbjct: 182 SYKSGARGQEVEYIQQALIKLGFDFGNAGADGDFGPTTKRQVEQFQKEYQETNNTHLAYQ 241

Query: 151 -LDPSGMVDSSTL 162
                G+V   TL
Sbjct: 242 VGTIDGIVGQGTL 254


>gi|297520868|ref|ZP_06939254.1| hypothetical protein EcolOP_24757 [Escherichia coli OP50]
          Length = 129

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 5/55 (9%)

Query: 320 NTYM-HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVK 373
             Y+ H T     F   +R  +SGC+R+R+  D+     + TP      I   +K
Sbjct: 5   GVYLLHGTNAD--FGIGMR-VSSGCIRLRD-DDIKTLFSQVTPGTKVNIINTPIK 55


>gi|296160646|ref|ZP_06843461.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. Ch1-1]
 gi|295889172|gb|EFG68975.1| Peptidoglycan-binding domain 1 protein [Burkholderia sp. Ch1-1]
          Length = 270

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             SV  L+  L       P   +        +SA++ FQ   G+  +G V   T   +  
Sbjct: 8   GTSVVFLQRALAQEN---PRLKVDGLSGPETQSALRRFQQLRGVPDTGTVCEQTRALVAQ 64

Query: 168 PVD 170
              
Sbjct: 65  TAQ 67


>gi|86133683|ref|ZP_01052265.1| conserved hypothetical protein [Polaribacter sp. MED152]
 gi|85820546|gb|EAQ41693.1| conserved hypothetical protein [Polaribacter sp. MED152]
          Length = 217

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G  +  +  ++++L+  G    +  +   +     +A+K F+ ++ L   G +D  TLE 
Sbjct: 157 GEKNAIIYEVQKKLVEQG---ETVRIDGVYRIETLNAIKAFEEKNNLLADGYLDELTLEW 213

Query: 165 M 165
           +
Sbjct: 214 L 214


>gi|260462409|ref|ZP_05810617.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031903|gb|EEW33171.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 278

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 20/160 (12%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY----HSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + +G  +   P+        +   +    +++    F +  A          P  + +  
Sbjct: 23  IAVGGMISRNPVLVGGSTAFLVTLFYVSANALWYQPFPHAGAFFATRSFQGFPHTATDEP 82

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             T        +I+     P               V++++  L           +     
Sbjct: 83  ETT-------INIVRPNAAPAPIKG-------DPVVEQVQGILKDLDFYS--GTVDGISG 126

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                A++ +Q + GL+ SG +D+  L+ +          
Sbjct: 127 PNTRKAIEAYQQKVGLNASGEIDAMLLDQLGATPKTAAVP 166



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              + +++  L   G  +    L     A  ++A+K FQ   GL  +G  D 
Sbjct: 216 DPRIVKIQAGLKAFG--NDDMQLDGVVGARTKAAIKEFQSLFGLPQTGEPDE 265


>gi|255657666|ref|ZP_05403075.1| hypothetical protein CdifQCD-2_18693 [Clostridium difficile
           QCD-23m63]
 gi|296450189|ref|ZP_06891950.1| probable peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile NAP08]
 gi|296878570|ref|ZP_06902575.1| probable peptidoglycan-binding/hydrolyzing protein [Clostridium
           difficile NAP07]
 gi|296260952|gb|EFH07786.1| probable peptidoglycan-binding/hydrolysing protein [Clostridium
           difficile NAP08]
 gi|296430377|gb|EFH16219.1| probable peptidoglycan-binding/hydrolyzing protein [Clostridium
           difficile NAP07]
          Length = 195

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            S      F     +AVK  Q R GL   G+V  ST +A   
Sbjct: 152 SSIKDDSEFGPATYNAVKSLQGRLGLTRDGIVGRSTWDAAGR 193


>gi|15894034|ref|NP_347383.1| ErfK family protein [Clostridium acetobutylicum ATCC 824]
 gi|15023630|gb|AAK78723.1|AE007590_3 Secreted protein containing uncharacterized conserved protein of
           ErfK family [Clostridium acetobutylicum ATCC 824]
 gi|325508161|gb|ADZ19797.1| Secreted protein containing uncharacterized conserved protein of
           ErfK family [Clostridium acetobutylicum EA 2018]
          Length = 466

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 33/109 (30%), Gaps = 13/109 (11%)

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP------GKINAMASTK 312
           L +   +   N   ++        V E D          +++        G  + + S  
Sbjct: 352 LSKQHLWFYKNGSLVVQGDVVTGNVSENDATPAGVYRLKYKERNATLKGQGYSSPV-SYW 410

Query: 313 IEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRVRNIIDLDVWLLKD 359
           + F       +HD     +F         + GCV   +  DL   + ++
Sbjct: 411 MPFNG--GIGIHDANWRSVFGGEIYKTGGSHGCV--NSPYDLAKTVFEN 455


>gi|329848176|ref|ZP_08263204.1| N-acetylmuramoyl-L-alanine amidase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328843239|gb|EGF92808.1| N-acetylmuramoyl-L-alanine amidase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 251

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 10/67 (14%)

Query: 90  SRGGW--PELP-----IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
             G W  P LP        L +G++   V  L+  L   G    +      +D    + V
Sbjct: 155 GHGLWVEPALPPEGVMGPALTVGDTGPGVFALQGALGKLGY---NILPGGPYDDETATLV 211

Query: 143 KLFQMRH 149
           + FQ   
Sbjct: 212 RAFQRHW 218


>gi|115375119|ref|ZP_01462387.1| putative peptidoglycan binding domain protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115367865|gb|EAU66832.1| putative peptidoglycan binding domain protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 491

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 17/73 (23%)

Query: 104 LGNSSVSVQR----LRERLIISGDLDPSKGLSVAFDAY------------VESAVKLFQM 147
           +G    +V      +++RL   G L      +   D                 A++ FQ 
Sbjct: 98  VGARGANVPADVRQVQDRLHELGFLSDEAYTAEQADPAQTEAVAEAAMPQTIEAIREFQR 157

Query: 148 R-HGLDPSGMVDS 159
              G+ P G V  
Sbjct: 158 EVAGITPDGNVGP 170


>gi|85707354|ref|ZP_01038436.1| hypothetical protein ROS217_03365 [Roseovarius sp. 217]
 gi|85668086|gb|EAQ22965.1| hypothetical protein ROS217_03365 [Roseovarius sp. 217]
          Length = 122

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/84 (14%), Positives = 25/84 (29%), Gaps = 5/84 (5%)

Query: 266 LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMH 324
           L       + EK +              P +      G   N + +  +    +    +H
Sbjct: 24  LTKRGYTEVVEKRENPSWAPTPSMRERNPEWPALIPGGDPANPLGTRALYLSWQY-YRIH 82

Query: 325 DTPEPILFNNVVRFETSGCVRVRN 348
            T +        R  ++GC+ + N
Sbjct: 83  GTQDTRKIG---RKSSNGCIGLYN 103


>gi|188582164|ref|YP_001925609.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
 gi|179345662|gb|ACB81074.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium populi BJ001]
          Length = 210

 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 12/75 (16%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T        + R  + GCVR+  RN   L   + +
Sbjct: 74  FSREWDNAPMPHAIFFTQVGHAIHGTTHTR---RLGRAASHGCVRLSQRNAATLFALVKQ 130

Query: 359 DTPTWSRYHIEEVVK 373
                +R  IE  V 
Sbjct: 131 QKMANTRVVIEGSVA 145


>gi|253578557|ref|ZP_04855829.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850875|gb|EES78833.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 477

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL---SVAFDAYVESAVKLFQMR 148
           GG        +  G+ + SV  L+E L   G    +      +   D     A+K +Q  
Sbjct: 396 GGSYMFNPETVKAGDKNTSVLLLQEILRARGFKGKNGKALKLTWTADVNTIYALKAYQES 455

Query: 149 HG--LDPSGMVDSSTLE 163
               L+  G+  S+T +
Sbjct: 456 RKEVLEVDGICGSATWK 472


>gi|56751778|ref|YP_172479.1| glucose 6-phosphate dehydrogenase assembly protein [Synechococcus
           elongatus PCC 6301]
 gi|81301142|ref|YP_401350.1| opcA protein [Synechococcus elongatus PCC 7942]
 gi|93141292|sp|Q54709|OPCA_SYNE7 RecName: Full=Putative OxPP cycle protein opcA
 gi|56686737|dbj|BAD79959.1| glucose 6-phosphate dehydrogenase assembly protein [Synechococcus
           elongatus PCC 6301]
 gi|81170023|gb|ABB58363.1| opcA protein [Synechococcus elongatus PCC 7942]
          Length = 445

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ++ L   G       L         +A+   Q + GL  +G  DS+T +A+         
Sbjct: 58  QQILAALGLYH--GHLDGLHGPMTRAAIAQAQTQFGLPSTGRPDSATFKALRQAYQALKH 115

Query: 175 QLQVNLMRIKK 185
              +    ++ 
Sbjct: 116 SPSLTNQDLRG 126


>gi|329903586|ref|ZP_08273559.1| General secretion pathway protein A [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548281|gb|EGF32975.1| General secretion pathway protein A [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 530

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G        L  +L +  D  P+       D    + V+ FQ+  GL P G+    TL  
Sbjct: 454 GAQGPVSDWLAAQLAVI-DGSPAPPAGKPVDE---ARVRRFQLMQGLKPDGIAGPQTLMR 509

Query: 165 MNVPVDLRIRQLQVNLMRIK 184
           +     L   +L    +  +
Sbjct: 510 LASTAGLAEPRLHTPPVAAR 529


>gi|303241186|ref|ZP_07327694.1| Peptidase M23 [Acetivibrio cellulolyticus CD2]
 gi|302591313|gb|EFL61053.1| Peptidase M23 [Acetivibrio cellulolyticus CD2]
          Length = 740

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 7/62 (11%)

Query: 109 VSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDP----SGMVDSST 161
             V  L+++L   G  D           F +   SAV  ++ ++GL       G V  +T
Sbjct: 186 EEVLLLQKKLNELGYTDDKGRKLVEDGLFGSNTLSAVNKYKEQNGLWNFGEYGGKVGKTT 245

Query: 162 LE 163
             
Sbjct: 246 WN 247


>gi|328544535|ref|YP_004304644.1| Lysozyme [polymorphum gilvum SL003B-26A1]
 gi|326414277|gb|ADZ71340.1| Lysozyme [Polymorphum gilvum SL003B-26A1]
          Length = 291

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 3/54 (5%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMNV 167
           +  L   G       +         +AV  FQ  H  L   G +  +T  A+  
Sbjct: 178 QRLLASLGY--RPGPVDGFDGPRTRAAVMRFQQDHPPLSVDGRIGPATRAALRR 229


>gi|307332608|ref|ZP_07611652.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
 gi|306881741|gb|EFN12883.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
          Length = 246

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 26/80 (32%), Gaps = 17/80 (21%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            +LSR GW  +  + L               L   G      G+          AVK  Q
Sbjct: 183 AVLSRPGWDVVEAQCL---------------LDHLGF--DPGGVDGVDGEMTTRAVKRLQ 225

Query: 147 MRHGLDPSGMVDSSTLEAMN 166
            + GL   G+V   T + + 
Sbjct: 226 EKAGLATDGLVGPQTWKVLR 245


>gi|225627891|ref|ZP_03785927.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella ceti str.
           Cudo]
 gi|256160175|ref|ZP_05457869.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M490/95/1]
 gi|256255381|ref|ZP_05460917.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti B1/94]
 gi|260169113|ref|ZP_05755924.1| N-acetylmuramoyl-L-alanine amidase, family 2 [Brucella sp. F5/99]
 gi|261222586|ref|ZP_05936867.1| N-acetylmuramoyl-L-alanine amidase [Brucella ceti B1/94]
 gi|261758622|ref|ZP_06002331.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. F5/99]
 gi|265998551|ref|ZP_06111108.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M490/95/1]
 gi|225617054|gb|EEH14100.1| anhydro-N-acetylmuramyl-tripeptide amidase [Brucella ceti str.
           Cudo]
 gi|260921170|gb|EEX87823.1| N-acetylmuramoyl-L-alanine amidase [Brucella ceti B1/94]
 gi|261738606|gb|EEY26602.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella sp. F5/99]
 gi|262553175|gb|EEZ09009.1| N-acetylmuramoyl-L-alanine amidase family 2 [Brucella ceti
           M490/95/1]
          Length = 268

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSS 160
           L  G     ++ L+  L + G       ++  FD   E  +K FQ      +  G+ D S
Sbjct: 195 LARGEQGQPMEALQSMLALYGY---EIAITGIFDEATEIVIKAFQRHFRPQNVDGVADVS 251

Query: 161 TLE 163
           T++
Sbjct: 252 TID 254


>gi|224136988|ref|XP_002326995.1| predicted protein [Populus trichocarpa]
 gi|222835310|gb|EEE73745.1| predicted protein [Populus trichocarpa]
          Length = 295

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            L+      G L       ++  FD   E+A+  +Q + GL  +G +D  TL  +  P
Sbjct: 3   ELKRYFHHFGYLPSQDLKSITDIFDDRFETAIVRYQAKLGLQTTGKLDLDTLNQIMAP 60


>gi|254503648|ref|ZP_05115799.1| Sel1 repeat family [Labrenzia alexandrii DFL-11]
 gi|222439719|gb|EEE46398.1| Sel1 repeat family [Labrenzia alexandrii DFL-11]
          Length = 1338

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 106  NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            ++S  ++  +++L   G    +            SA++ FQ   GL  +G VDS  ++ +
Sbjct: 1276 DNSALIREAQDKLNYLGF--DTGTPDGQMGPRTRSAIRAFQRSLGLPETGQVDSRLIDEL 1333

Query: 166  NVPV 169
                
Sbjct: 1334 KSQA 1337


>gi|284045708|ref|YP_003396048.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283949929|gb|ADB52673.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 233

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 8/85 (9%)

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKI-----EFYSRNNTYMHD 325
           + +    G                     Q     +A+ ++       E+ +     +H 
Sbjct: 135 LTVRIGIGAAATPTPAGRYWIREKLRFAAQPVYGTHALGTSAYAPTLTEWPAGGVVGLHG 194

Query: 326 TPEPILFNNVVRFETSGCVRVRNII 350
           T +P L     R  + GCVR+RN  
Sbjct: 195 TDQPELI--PGRP-SHGCVRIRNAE 216


>gi|330824901|ref|YP_004388204.1| lytic murein transglycosylase [Alicycliphilus denitrificans K601]
 gi|329310273|gb|AEB84688.1| lytic murein transglycosylase [Alicycliphilus denitrificans K601]
          Length = 442

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP    R L   + S  V+ L+E L   G    +            + V+ +Q   GL 
Sbjct: 374 PWP----RDLQPLSRS-DVKTLQELLNARGL--DAGTPDGVAGPATRAGVRRYQQSLGLP 426

Query: 153 PSGMVDSSTLEAMNVP 168
             G      L+ +  P
Sbjct: 427 ADGYATRELLQQLQEP 442


>gi|192362309|ref|YP_001984198.1| Chitosanase Csn46F [Cellvibrio japonicus Ueda107]
 gi|190688474|gb|ACE86152.1| Chitosanase Csn46F [Cellvibrio japonicus Ueda107]
          Length = 310

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 103 HLGNSSVSV--QRLRE---RLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPS 154
             G  ++SV    LR    RL+  G L  S         F     SAVK FQ +  L  +
Sbjct: 239 QPGTRTLSVQAPLLRGLDIRLVQLG-LSKSGINLRADGIFGNGSVSAVKTFQTKQNLPAT 297

Query: 155 GMVDSSTLEAM 165
           G+VD++ +  +
Sbjct: 298 GIVDNALIAKL 308


>gi|86747744|ref|YP_484240.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris HaA2]
 gi|86570772|gb|ABD05329.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris HaA2]
          Length = 460

 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 34/109 (31%), Gaps = 19/109 (17%)

Query: 82  IAFYQDILSRGGWP---ELPIRPLHLGNSSVSVQRLR------------ERLIISGDLDP 126
           IA    + +    P    +P        ++     L+            ER  I  DL  
Sbjct: 11  IASATGLAAAQTAPPSGAVPAVKPKPVATTPVRPALQTPAETAQAMTPAERQAIQSDLAW 70

Query: 127 SKGLSVAFD----AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           +   +   +      + +A+K FQ  HG   +G+++      +      
Sbjct: 71  TGDYNGVINGEPSERMVTAIKAFQKNHGGKQTGVLNPQERAQLTEAARK 119


>gi|319762822|ref|YP_004126759.1| lytic murein transglycosylase [Alicycliphilus denitrificans BC]
 gi|317117383|gb|ADU99871.1| lytic murein transglycosylase [Alicycliphilus denitrificans BC]
          Length = 442

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP    R L   + S  V+ L+E L   G    +            + V+ +Q   GL 
Sbjct: 374 PWP----RDLQPLSRS-DVKTLQELLNARGL--DAGTPDGVAGPATRAGVRRYQQSLGLP 426

Query: 153 PSGMVDSSTLEAMNVP 168
             G      L+ +  P
Sbjct: 427 ADGYATRELLQQLQEP 442


>gi|284049125|ref|YP_003399464.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
           20731]
 gi|283953346|gb|ADB48149.1| ErfK/YbiS/YcfS/YnhG family protein [Acidaminococcus fermentans DSM
           20731]
          Length = 241

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 45/182 (24%), Gaps = 54/182 (29%)

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV---------DRQ 227
           QV      +          VLV+     L   +   V       +G+          D  
Sbjct: 86  QVAPQPAAEQPLVPGKKYAVLVDKSDHKLYLKDGDTVVRTWGCAIGKGGLGQKERRGDNM 145

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           TP+   RI+ I     W         ++       P +L  +             + + +
Sbjct: 146 TPVGTFRIDEIDDASGWTHDFGDGNGEI--QGAYGPWFLSLD----------TEDLSQGN 193

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR 347
           W                              +   +H T +P          + GCVR+ 
Sbjct: 194 W------------------------------DGIGIHGTHDPASIGTD---ASEGCVRLD 220

Query: 348 NI 349
           N 
Sbjct: 221 NA 222


>gi|254282058|ref|ZP_04957026.1| glycosidase family protein [gamma proteobacterium NOR51-B]
 gi|219678261|gb|EED34610.1| glycosidase family protein [gamma proteobacterium NOR51-B]
          Length = 395

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 87  DILSRGGWPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            I   G   + +P   + L      V +++E LI  G    +            SA++ F
Sbjct: 316 RIAGAGALKQSIPKDQVRL--RRADVVQMQELLIDKGF--DAGVPDGLLGPTTRSALREF 371

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q+  GL   G  D  TL  + V 
Sbjct: 372 QISAGLVGDGFPDRKTLTQLGVD 394


>gi|171921109|gb|ACB59207.1| matrixin family protein [Brassica oleracea]
          Length = 383

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G     + ++++     G +  +     S  FD  +++AV+++Q    L+ +G +D  TL
Sbjct: 55  GMKVDGLYKIKQYFQHFGYIPQTLPGNFSDDFDDILKNAVEMYQRNFKLNITGELDELTL 114

Query: 163 EAMNVP 168
           + + +P
Sbjct: 115 QHVVIP 120


>gi|220908800|ref|YP_002484111.1| OpcA protein [Cyanothece sp. PCC 7425]
 gi|219865411|gb|ACL45750.1| OpcA protein [Cyanothece sp. PCC 7425]
          Length = 456

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 2/58 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           ++ L   G       +        E+A++  Q  + L   G      L+ +   +  R
Sbjct: 63  QQLLAALGFY--RGPVDGILGPQTEAAIRAAQTTYKLPVDGTSSPELLQKLQQALAER 118


>gi|257094051|ref|YP_003167692.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046575|gb|ACV35763.1| ErfK/YbiS/YcfS/YnhG family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 162

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTPT 362
            N +         R   Y+H +P+        R  + GC+R+ N    +L   +   TP 
Sbjct: 104 RNRLGEVDTM---RRYVYIHGSPDSTPMG---RPGSIGCIRMHNADIIELFDLVAPYTPV 157

Query: 363 W 363
            
Sbjct: 158 D 158


>gi|254471723|ref|ZP_05085124.1| putative hemagglutinin protein [Pseudovibrio sp. JE062]
 gi|211958925|gb|EEA94124.1| putative hemagglutinin protein [Pseudovibrio sp. JE062]
          Length = 1481

 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 108  SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            S +V+++++ L+  G    +             A+K  Q R G++ +G  D   + A+ 
Sbjct: 1421 SPTVKKMQQALLNMGYDPGNP--DGVMGPNTRRAIKSLQARLGMEATGEPDQRLITALA 1477


>gi|293189660|ref|ZP_06608377.1| putative peptidoglycan binding domain protein [Actinomyces
           odontolyticus F0309]
 gi|292821398|gb|EFF80340.1| putative peptidoglycan binding domain protein [Actinomyces
           odontolyticus F0309]
          Length = 344

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 100 RPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R    G S    V +L   L   G        +  FD    +A+K +Q    L  SG + 
Sbjct: 98  RAFEEGMSDGEDVTQLETALSELGYF--EATPNAHFDWNTIAAIKRWQKALSLPQSGSLP 155

Query: 159 SSTL 162
             T+
Sbjct: 156 LGTV 159


>gi|268316180|ref|YP_003289899.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
 gi|262333714|gb|ACY47511.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
          Length = 215

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 41/171 (23%), Gaps = 52/171 (30%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV-----------DRQTPILHSRINRIM 239
               Y++V+           G++        G               QTP     +   +
Sbjct: 69  PAGAYLVVSTTENHFWLYVGGRLIREGRCSTGSYVYLKGSGGRSWLFQTPRGQFFVQSKI 128

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            NP W  P     ++                       GK +            P    R
Sbjct: 129 VNPVWHKPDWAFVEE-----------------------GKPIPP----------PGSPER 155

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            + G    +    +   +     +H T    L        T GCVR+ +  
Sbjct: 156 YEYG---VLGRYALAIGN--GYLIHGTLYQRLLG---LPVTHGCVRLGDAD 198


>gi|297201187|ref|ZP_06918584.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197713739|gb|EDY57773.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 176

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++ L   G+L  S G+   F +   +A   +Q +  +   G     T  A  
Sbjct: 71  QKILWADGELAAS-GIDGDFGSNTAAATARWQTKFQVPSDGSAGQQTWTAAG 121


>gi|188582710|ref|YP_001926155.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
 gi|179346208|gb|ACB81620.1| lytic murein transglycosylase [Methylobacterium populi BJ001]
          Length = 400

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              ++RL+  L   G               +  AV+ +Q+R GL   G    + LE +  
Sbjct: 338 GPGLKRLQAGLAAQGLYAGE--QDGRAGPKLREAVRQYQIREGLPADGYARPALLERLER 395


>gi|927023|gb|AAA99948.1| senescence-specific protein [Cucumis sativus]
          Length = 126

 Score = 41.6 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 103 HLGNSSVSVQRLRERLIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLD 152
           HLG++   + ++++ L   G +        +      FD  +ESA+K +Q  H L 
Sbjct: 55  HLGDTKQGIHQIKKYLQRFGYITTNIQKHSNPIFDDTFDHILESALKTYQTNHNLA 110


>gi|154245354|ref|YP_001416312.1| peptidoglycan binding domain-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154159439|gb|ABS66655.1| Peptidoglycan-binding domain 1 protein [Xanthobacter autotrophicus
           Py2]
          Length = 239

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 27/83 (32%), Gaps = 4/83 (4%)

Query: 86  QDILSRGGWPELPIRPLHLGN--SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
           +   S G   ++       G+  +S  +  +++ L   G       +         +A++
Sbjct: 151 RPPASVGAGTDVTGAVRPPGDVPASPRLLAVQKALAKLGY--GPLKVDGRPGGETRTAIQ 208

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            FQ    +   G V    +  + 
Sbjct: 209 RFQRDRNMTADGEVSDKLVRELA 231


>gi|148656278|ref|YP_001276483.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus sp. RS-1]
 gi|148568388|gb|ABQ90533.1| ErfK/YbiS/YcfS/YnhG family protein [Roseiflexus sp. RS-1]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 9/66 (13%)

Query: 309 ASTKIEFYSRN------NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPT 362
               +     +         +H T    LF    R  + GCV +   +    WL +  P 
Sbjct: 334 GKYWVVPNVPHVMYFSGGVALHGTYWHNLFGTGARP-SHGCVNL--PLKSAAWLYEWAPV 390

Query: 363 WSRYHI 368
            +   +
Sbjct: 391 GTPVRV 396


>gi|323135715|ref|ZP_08070798.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
 gi|322398806|gb|EFY01325.1| ErfK/YbiS/YcfS/YnhG family protein [Methylocystis sp. ATCC 49242]
          Length = 176

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 13/81 (16%)

Query: 315 FYSRNNTYMHDTPEPILFNNVV-RFETSGCVR--VRNIIDLDVWLLKDTPTWSRY---HI 368
           F+S     +H       F   + R  + GCVR  V N   L  W+ ++    S       
Sbjct: 86  FFSPRGLAIHG-----SFERGLGRPASHGCVRLSVANAQKLYQWV-EEQGGASIEIVGET 139

Query: 369 EEVVKTRKTTPVK-LATEVPV 388
               +          +   PV
Sbjct: 140 RSAARRGPRLERPRFSRRPPV 160


>gi|311031912|ref|ZP_07710002.1| carboxyl-terminal protease [Bacillus sp. m3-13]
          Length = 492

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L L  +S  V+ ++  L   G           F    E AVK FQ  + L  SG VDS T
Sbjct: 405 LALDANSEKVKNVQVMLKGLGF--DPGREDGYFSKETEDAVKSFQAENDLSTSGKVDSQT 462

Query: 162 LEAMNV 167
            E +  
Sbjct: 463 AEQLQA 468


>gi|86359710|ref|YP_471601.1| hypothetical protein RHE_PA00005 [Rhizobium etli CFN 42]
 gi|86283812|gb|ABC92874.1| hypothetical protein RHE_PA00005 [Rhizobium etli CFN 42]
          Length = 217

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 6/76 (7%)

Query: 96  ELPIRPLHLGNSSV---SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            +P++ L  GNS      V +++  L+  G       ++   DA     +   Q  +GL 
Sbjct: 143 PMPLKTL-PGNSDKFRRIVIQVQTALVAFGYF--GGPITGQVDAATRVGLNKMQDAYGLK 199

Query: 153 PSGMVDSSTLEAMNVP 168
            +G +    L A  + 
Sbjct: 200 VTGTITPQVLTAFGIS 215


>gi|302551254|ref|ZP_07303596.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302468872|gb|EFL31965.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 606

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            + +G     V+ ++  L   G       +   F       V  FQ+  GL P+G+V+  
Sbjct: 430 TIAMGEHDACVKEVQRLLHTKG---ADIDVDGDFGPQTLRRVTAFQVLAGLQPNGVVEEP 486

Query: 161 TLEAMNVP-------VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           T +A+             ++RQ      R++++  +       + +  + 
Sbjct: 487 TKKALYTSRVRMTVWPQEKVRQ------RVREVFPEAPDKAVAIADCQSF 530


>gi|241896161|ref|ZP_04783457.1| YbfG like protein [Weissella paramesenteroides ATCC 33313]
 gi|241870580|gb|EER74331.1| YbfG like protein [Weissella paramesenteroides ATCC 33313]
          Length = 257

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 10/100 (10%)

Query: 74  TIAQTEKAIAFYQDI--LSRG----GWPELPI--RPLHLGNSSVSVQRLRERLIISGDLD 125
           TI    + +     I  ++ G        +      L  G S   V+ ++      G   
Sbjct: 35  TIYALREGLQHEVGISPVASGFGEATENAVSKVLGKLKNGYSGNLVKLIQGAFWAKG--I 92

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
               L   +     SA++  Q + G+   G + +  ++A+
Sbjct: 93  SPSALDGKYTNETTSAIENLQRQAGVTADGKMTTQLMKAL 132


>gi|222110881|ref|YP_002553145.1| lytic murein transglycosylase [Acidovorax ebreus TPSY]
 gi|221730325|gb|ACM33145.1| lytic murein transglycosylase [Acidovorax ebreus TPSY]
          Length = 466

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R L   + S  V+ L+E L   G    +            + V+ +Q   GL  
Sbjct: 399 WP----RELQPLSRS-EVRALQEALNARGL--DTGTPDGVAGPATRAGVRRYQQSVGLPA 451

Query: 154 SGMVDSSTLEAMNVP 168
            G      L+ +  P
Sbjct: 452 DGYATRELLQRLLTP 466


>gi|159038429|ref|YP_001537682.1| peptidoglycan binding domain-containing protein [Salinispora
           arenicola CNS-205]
 gi|157917264|gb|ABV98691.1| Peptidoglycan-binding domain 1 protein [Salinispora arenicola
           CNS-205]
          Length = 268

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 15/46 (32%)

Query: 124 LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
                G    +    +  +K FQ   GL   G++   T +A     
Sbjct: 221 YLRRAGSDGLYGPEHQELIKAFQADQGLARDGLLGRLTWDAAYHNP 266


>gi|319795776|ref|YP_004157416.1| erfk/ybis/ycfs/ynhg family protein [Variovorax paradoxus EPS]
 gi|315598239|gb|ADU39305.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus EPS]
          Length = 508

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 12/66 (18%)

Query: 309 ASTKIEFYSRN---------NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
            +  I + +             ++H TP P  F       + GCV + N  DL   L K 
Sbjct: 317 GALPINYPNPYDVRRGRTGSGIWLHGTP-PQQFARAPLA-SDGCVVMANP-DLKQLLRKV 373

Query: 360 TPTWSR 365
               + 
Sbjct: 374 QIGATP 379


>gi|310825691|ref|YP_003958048.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
           KIST612]
 gi|308737425|gb|ADO35085.1| muramoyl-pentapeptide carboxypeptidase [Eubacterium limosum
           KIST612]
          Length = 244

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 9/95 (9%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
             ET A   +    Y DI + G    +    L     S  V+ ++ +L   G       +
Sbjct: 27  GPETQAAVRRTQEGY-DIEADGIAGPVTKEHL-----SKQVRGIQAQLNAKG---CGCPV 77

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                   ++AVK  Q   GL   G+V  +T  A+
Sbjct: 78  DGLPGPLTDAAVKTLQADFGLVADGIVGYNTEAAL 112


>gi|260662383|ref|ZP_05863278.1| cell surface protein [Lactobacillus fermentum 28-3-CHN]
 gi|260553074|gb|EEX26017.1| cell surface protein [Lactobacillus fermentum 28-3-CHN]
          Length = 216

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 43/145 (29%), Gaps = 20/145 (13%)

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMID-----EKGKEVF 282
           ++ + I+    +     P      D+   +  ++   YL DN   +         GK   
Sbjct: 65  VMRTPIDWQKSSETVAYPDVNAHPDLWIKVSKKKQRVYLIDNGKILYTMYCSTGTGKNDT 124

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN--------N 334
                +   E   + + Q  G+    A   + + +      H  P     N         
Sbjct: 125 PTGTYYIQAERGTYFYSQQSGEG---AHYWVSWLNHGEYLFHSVPTDESGNYKLSEAKQL 181

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKD 359
             +  + GCVR+        W  ++
Sbjct: 182 GKKAASHGCVRLSVPD--AKWFYEN 204


>gi|225628550|ref|ZP_03786584.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
 gi|237816592|ref|ZP_04595584.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
 gi|225616396|gb|EEH13444.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
 gi|237787405|gb|EEP61621.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
          Length = 429

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 376 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 428


>gi|225020851|ref|ZP_03710043.1| hypothetical protein CORMATOL_00859 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946333|gb|EEG27542.1| hypothetical protein CORMATOL_00859 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 369

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 18/124 (14%)

Query: 60  DMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-----LG--------- 105
                 +   +  + +    +     + I++ G   E+ +R L      LG         
Sbjct: 13  PDHAIYNADTLFDDELEAALRGFQQARGIIASGEINEMTLRVLREASYELGARVLNYQPH 72

Query: 106 --NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
              S   V +L+++L   G       +   F  +   A+  +QM +GL+  G+   +T+ 
Sbjct: 73  NEMSGDDVVQLQQQLQELGFYS--DRIDGHFGEHTYRALLKYQMNYGLNMDGICGPNTIR 130

Query: 164 AMNV 167
           ++N 
Sbjct: 131 SLNR 134


>gi|84500741|ref|ZP_00998990.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           batsensis HTCC2597]
 gi|84391694|gb|EAQ04026.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein [Oceanicola
           batsensis HTCC2597]
          Length = 206

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 50/182 (27%), Gaps = 46/182 (25%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV-ENGKVGLRSTVIVGRVDRQ 227
             +R        +  +           +LV+I + +L    E+  +       V   +  
Sbjct: 50  PAVRRNISSFRSLDWRPYFSNTRNG-AILVDIDSRALHYWSEDQSIYRLYPSSVPVSEEL 108

Query: 228 TPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
           T    + + + +  P W    ++         +++P                       +
Sbjct: 109 TRRGRTSVVQKVVKPTWRPTPNMR--------KRNP-----------------------E 137

Query: 288 WNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           W +         +     N +    +        Y +H T +        R  ++GC+ +
Sbjct: 138 WPA-------VVEGGAPDNPLGPLALYL--GWTYYRIHGTHDTRKIG---RRSSNGCIGL 185

Query: 347 RN 348
            N
Sbjct: 186 YN 187


>gi|158311974|ref|YP_001504482.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Frankia sp. EAN1pec]
 gi|158107379|gb|ABW09576.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Frankia sp. EAN1pec]
          Length = 361

 Score = 41.6 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 13/78 (16%)

Query: 101 PLHLGNSSVSVQRLRERLII-------SGDLDPSKGLSVAFDAYVESAVKLFQM----RH 149
            L  G S   V  L+  L I       +GD         A+ A   + V   Q       
Sbjct: 275 TLREGMSGPEVVTLQNALNIIFGHEAPTGD-PYRLAPDGAYGARTTARVASLQRYATPWF 333

Query: 150 G-LDPSGMVDSSTLEAMN 166
           G +   G+   +T   + 
Sbjct: 334 GRIPEDGVCGPNTWRKIG 351


>gi|259417667|ref|ZP_05741586.1| lytic murein transglycosylase [Silicibacter sp. TrichCH4B]
 gi|259346573|gb|EEW58387.1| lytic murein transglycosylase [Silicibacter sp. TrichCH4B]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G S   ++ L+ RL   G       +     A    AV+  Q R GL 
Sbjct: 328 GAPVYDAGNSEQGLSGDQMKELQRRLQARGH--DVGDVDGILGANTRLAVQAEQKRLGLP 385

Query: 153 PSGMVDSSTLEAM 165
                    L A+
Sbjct: 386 ADAWPTPDLLNAL 398


>gi|288574492|ref|ZP_06392849.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288570233|gb|EFC91790.1| ErfK/YbiS/YcfS/YnhG family protein [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 135

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 311 TKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            +++    +   +H T E  L        + GC+R++N   L
Sbjct: 79  IRLKTPPWSGIGIHGTDEGHLSEIGT-DASHGCIRMKNEDLL 119


>gi|256395922|ref|YP_003117486.1| peptidoglycan-binding protein [Catenulispora acidiphila DSM 44928]
 gi|256362148|gb|ACU75645.1| Peptidoglycan-binding domain 1 protein [Catenulispora acidiphila
           DSM 44928]
          Length = 389

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLD----P 153
            L LG+S  +V +L++ L           +  +S  +D+  + AV+ FQ  +       P
Sbjct: 313 SLKLGSSGAAVTQLQQNLRRWQRSSFGWSTIQVSGNYDSATQDAVQSFQDNNPGTSPPDP 372

Query: 154 SGMVDSSTLEAMNV 167
           +G+   +T +A+  
Sbjct: 373 AGVYGPATDQALRK 386


>gi|145594170|ref|YP_001158467.1| peptidoglycan binding domain-containing protein [Salinispora
           tropica CNB-440]
 gi|145303507|gb|ABP54089.1| Peptidoglycan-binding domain 1 protein [Salinispora tropica
           CNB-440]
          Length = 270

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 22/91 (24%)

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
            + +A +   L+R GWP    +             LR+            G    +    
Sbjct: 200 RQWLAMWTKQLTRRGWPAGKGKRY-----------LRK-----------NGHDGLYGPEH 237

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
              +  FQ   GL   G++  +T +A     
Sbjct: 238 RELITAFQADQGLSRDGLLGRNTWDAAYRNP 268


>gi|311267841|ref|XP_003131763.1| PREDICTED: matrix metalloproteinase-28-like [Sus scrofa]
          Length = 521

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+     S         A++ FQ    L  SG++D +TL  M  P
Sbjct: 40  LEKYGYLNEQVPQSPTSSLRFSKAIREFQWVSQLPISGVLDPATLRQMMRP 90


>gi|254562448|ref|YP_003069543.1| membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
 gi|254269726|emb|CAX25698.1| putative membrane bound lytic murein transglycosylase B, mltB
           [Methylobacterium extorquens DM4]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 25/81 (30%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                WP    R          ++RL+  L   G               +  AV+ +Q+R
Sbjct: 320 ALAAPWPNGAARL-----DGPGLKRLQVGLAAKGLYAGE--QDGRAGPKLREAVRQYQIR 372

Query: 149 HGLDPSGMVDSSTLEAMNVPV 169
            GL   G    + LE +    
Sbjct: 373 EGLPADGYARPALLERLEGRP 393


>gi|221133642|ref|ZP_03559947.1| lytic murein transglycosylase [Glaciecola sp. HTCC2999]
          Length = 398

 Score = 41.6 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + L+  L   G      G+     +   +A++ FQ+ +G+   G       E    
Sbjct: 341 KALQRHLQALGY--DVNGIDGVIGSGTRAAIRAFQLDNGMIADGFAHPEVFEKAAQ 394


>gi|78044022|ref|YP_360720.1| putative peptidoglycan binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996137|gb|ABB15036.1| putative peptidoglycan binding protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 168

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 7/56 (12%), Positives = 18/56 (32%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V  ++  L  +        +   + +  +  ++ FQ    +   G+V   T     
Sbjct: 50  VLAIQRMLKDTPY--GYSSVDGYYGSLTQKGIEDFQRSEKIQVDGIVGKVTWGEFQ 103


>gi|126667790|ref|ZP_01738757.1| hypothetical protein MELB17_09083 [Marinobacter sp. ELB17]
 gi|126627738|gb|EAZ98368.1| hypothetical protein MELB17_09083 [Marinobacter sp. ELB17]
          Length = 643

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V+ L+  L  SG    +  +         SA+K FQ  +G  P+G  D ST+  +  
Sbjct: 585 VKDLQRTLTASGY--NAGPIDGVIGRATVSALKQFQHDNGTTPTGTQDYSTIRLLKA 639


>gi|159170556|gb|ABW96008.1| matrix metalloproteinase [Glycine max]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 17/107 (15%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   G ++ S   + +FD  + SA+K +Q    L  +G ++   ++ M     +R     
Sbjct: 114 LSDYGYIESSGPFNDSFDQEIISAIKTYQNFSNLQVTGGLNKELIQQML---SIRCGVPD 170

Query: 178 VNLMR-------------IKKLLEQKMGLRYV-LVNIPAASLEAVEN 210
           VN                 +    + +   ++    IP    +   +
Sbjct: 171 VNFDYNSTDDNISYPKAGHRWFPNRNLTYGFLPENQIPDNMTKVFRD 217


>gi|218438479|ref|YP_002376808.1| OpcA protein [Cyanothece sp. PCC 7424]
 gi|218171207|gb|ACK69940.1| OpcA protein [Cyanothece sp. PCC 7424]
          Length = 456

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 2/76 (2%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ++ L   G       +         +A+K  Q  +GL+ +G  +   L  +       I 
Sbjct: 60  QQLLTALGFYS--GPIDGIAGPRTTAAIKAAQKAYGLEVTGKSNPQLLTKLQEAFAQAIE 117

Query: 175 QLQVNLMRIKKLLEQK 190
           + ++     K L    
Sbjct: 118 EGKLTSSDQKSLQPYP 133


>gi|187477736|ref|YP_785760.1| lytic murein transglycosylase [Bordetella avium 197N]
 gi|115422322|emb|CAJ48846.1| putative lytic murein transglycosylase [Bordetella avium 197N]
          Length = 405

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 81  AIAFYQDILSRG-----GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           AIA   D L  G      WP         G S    + ++E L+  G             
Sbjct: 319 AIAHLSDRLRGGLPFARPWPTDDA-----GLSRAERKEIQELLVARGY--DIGMPDGVIG 371

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           A    A++  Q   GL   G     TL+A+    
Sbjct: 372 ARTRQALQSVQRELGLPDDGRAGQRTLKALRAQP 405


>gi|254711939|ref|ZP_05173750.1| Putative peptidoglycan binding domain 1 [Brucella ceti M644/93/1]
 gi|261319579|ref|ZP_05958776.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
 gi|261292269|gb|EEX95765.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
          Length = 412

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|254699386|ref|ZP_05161214.1| Putative peptidoglycan binding domain 1 [Brucella suis bv. 5 str.
           513]
 gi|261749835|ref|ZP_05993544.1| lytic Murein transglycosylase [Brucella suis bv. 5 str. 513]
 gi|261739588|gb|EEY27514.1| lytic Murein transglycosylase [Brucella suis bv. 5 str. 513]
          Length = 412

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|148558066|ref|YP_001257145.1| putative transglycosylase [Brucella ovis ATCC 25840]
 gi|148369351|gb|ABQ62223.1| putative transglycosylase [Brucella ovis ATCC 25840]
          Length = 412

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|92119350|ref|YP_579079.1| peptidoglycan binding domain-containing protein [Nitrobacter
           hamburgensis X14]
 gi|91802244|gb|ABE64619.1| Peptidoglycan-binding domain 1 [Nitrobacter hamburgensis X14]
          Length = 522

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++ ++  LI  G L                A+ +FQ + G+  SG +D+ T+ ++ V 
Sbjct: 338 DDIRVVQRVLIERGLLHGEA--DGVLGPETREAITVFQRQQGIQMSGSIDARTVSSLGVS 395


>gi|62317029|ref|YP_222882.1| transglycosylase [Brucella abortus bv. 1 str. 9-941]
 gi|83269023|ref|YP_418314.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189022296|ref|YP_001932037.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|254695217|ref|ZP_05157045.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 3
           str. Tulya]
 gi|254698316|ref|ZP_05160144.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254706370|ref|ZP_05168198.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M163/99/10]
 gi|254711340|ref|ZP_05173151.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           B2/94]
 gi|254731759|ref|ZP_05190337.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 4
           str. 292]
 gi|256014866|ref|YP_003104875.1| membrane-bound lytic murein transglycosylase B [Brucella microti
           CCM 4915]
 gi|256030031|ref|ZP_05443645.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M292/94/1]
 gi|256158203|ref|ZP_05456112.1| Putative peptidoglycan binding domain 1 [Brucella ceti M490/95/1]
 gi|256252855|ref|ZP_05458391.1| Putative peptidoglycan binding domain 1 [Brucella ceti B1/94]
 gi|256256672|ref|ZP_05462208.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 9
           str. C68]
 gi|260166918|ref|ZP_05753729.1| membrane-bound lytic murein transglycosylase B [Brucella sp. F5/99]
 gi|260544265|ref|ZP_05820086.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260759523|ref|ZP_05871871.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260762767|ref|ZP_05875099.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882916|ref|ZP_05894530.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|261215579|ref|ZP_05929860.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|261219942|ref|ZP_05934223.1| lytic Murein transglycosylase [Brucella ceti B1/94]
 gi|261313816|ref|ZP_05953013.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
 gi|261318943|ref|ZP_05958140.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261756303|ref|ZP_06000012.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|265987053|ref|ZP_06099610.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|265996715|ref|ZP_06109272.1| lytic Murein transglycosylase [Brucella ceti M490/95/1]
 gi|294853097|ref|ZP_06793769.1| transglycosylase [Brucella sp. NVSL 07-0026]
 gi|297250027|ref|ZP_06933728.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|62197222|gb|AAX75521.1| hypothetical transglycosylase [Brucella abortus bv. 1 str. 9-941]
 gi|82939297|emb|CAJ12235.1| Putative peptidoglycan binding domain 1 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020870|gb|ACD73591.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|255997526|gb|ACU49213.1| membrane-bound lytic murein transglycosylase B [Brucella microti
           CCM 4915]
 gi|260097536|gb|EEW81410.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260669841|gb|EEX56781.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260673188|gb|EEX60009.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260872444|gb|EEX79513.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|260917186|gb|EEX84047.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|260918526|gb|EEX85179.1| lytic Murein transglycosylase [Brucella ceti B1/94]
 gi|261298166|gb|EEY01663.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261302842|gb|EEY06339.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
 gi|261736287|gb|EEY24283.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|262551012|gb|EEZ07173.1| lytic Murein transglycosylase [Brucella ceti M490/95/1]
 gi|264659250|gb|EEZ29511.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|294818752|gb|EFG35752.1| transglycosylase [Brucella sp. NVSL 07-0026]
 gi|297173896|gb|EFH33260.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
          Length = 412

 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|306845309|ref|ZP_07477884.1| lytic murein transglycosylase [Brucella sp. BO1]
 gi|306274225|gb|EFM56037.1| lytic murein transglycosylase [Brucella sp. BO1]
          Length = 412

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|224541968|ref|ZP_03682507.1| hypothetical protein CATMIT_01141 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525108|gb|EEF94213.1| hypothetical protein CATMIT_01141 [Catenibacterium mitsuokai DSM
           15897]
          Length = 502

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 2/47 (4%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +  +   L + G           F   V  A+K F+  HGL   G++
Sbjct: 426 IIVMERLLEVLGY--NPGRTDGYFSQGVSDALKRFEQDHGLTVDGVL 470


>gi|19223862|gb|AAL86364.1|AF332574_1 putative lytic transglycosylase [Desulfovibrio gigas]
          Length = 313

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 9/128 (7%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  V+ ++ RL   G L     +          A++ ++   GL  +G    + L  +  
Sbjct: 22  SALVRDVQHRLKTLGYL--EGKVDGVAGPGTRLAIRRYEHVSGLPLTGKATETLLTRLRT 79

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQ 227
                  Q+ V         E +    Y  +  P    EAV   K  L     +      
Sbjct: 80  EKRHAPPQVTV-------PPEPEGPTVYRSIVTPERLAEAVVFYKTNLPLLRRIEAEYGV 132

Query: 228 TPILHSRI 235
            P + + +
Sbjct: 133 PPPVTTGL 140


>gi|42522457|ref|NP_967837.1| hypothetical protein Bd0886 [Bdellovibrio bacteriovorus HD100]
 gi|39574989|emb|CAE78830.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
           bacteriovorus HD100]
          Length = 486

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 58/192 (30%), Gaps = 28/192 (14%)

Query: 207 AVENGKVGLRSTVIVGRVDR--QTPILHSRINRIM--------FNPYWVIPRSIIQKDMM 256
            +E   V  R     G+ D   +T + HSRI+  +        F P W  P   I+    
Sbjct: 158 VMETDMVVGRPEEGDGQDDNAYKTWVGHSRISEWVKFYQDGKAFYPRWYTPGQNIKDIPD 217

Query: 257 ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
            +      Y+        +E+GK        W + +          G+   +    I   
Sbjct: 218 PVTDSMSLYMGARKWLRKNEQGKTSNYGAFGWYAAKLT------PAGENGGVNYQWIHGT 271

Query: 317 SRNNTYMHDTPEP------ILFNNVVRFETSGCVRVRN-IIDLDVWLLKDTPTWSRYHIE 369
                   D  +P       + N      + GC R+ N  +     LL   P    Y + 
Sbjct: 272 MGWGK---DGSKPIEITRMKMINFFSNPGSHGCTRLENQAVAYMRHLLG--PGTDIYRVY 326

Query: 370 EVVKTRKTTPVK 381
               +R+  P  
Sbjct: 327 AREASREAAPFS 338


>gi|220924768|ref|YP_002500070.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium nodulans ORS 2060]
 gi|219949375|gb|ACL59767.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium nodulans ORS 2060]
          Length = 249

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 52/145 (35%), Gaps = 20/145 (13%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--------- 96
                +    +A +   I +  PI +   +A ++ A +  QD      W           
Sbjct: 109 PYPEAQVAAVIA-LARDILARWPIRADRVLAHSDVAPSRKQDPGEGFPWERLHRAGVGHW 167

Query: 97  LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +P  P+        G++   ++ L+    + G     + ++  FD  + + V+ FQ    
Sbjct: 168 VPPAPIRDGRFFAEGDAGQPIEALQAMFALYGY---DQPVTGTFDVRMRAVVEAFQRHFR 224

Query: 151 -LDPSGMVDSSTLEAMNVPVDLRIR 174
                G+ D+ST+  +   +  R  
Sbjct: 225 PARVDGVADASTITTLRDLIAARAA 249


>gi|13476355|ref|NP_107925.1| hypothetical protein mlr7650 [Mesorhizobium loti MAFF303099]
 gi|14027116|dbj|BAB54070.1| mlr7650 [Mesorhizobium loti MAFF303099]
          Length = 270

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V++++  L           +          A++ +Q + GL+ SG +D+  L+ +  
Sbjct: 101 DPVVEQVQGILKDLDFYS--GTVDGISGPNTRKAIQAYQQKVGLNASGEIDALLLDQLGA 158

Query: 168 PVD 170
              
Sbjct: 159 TPK 161



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              + +++  L   G  +    L     A  ++A+K FQ   GL  +G  D 
Sbjct: 208 DPRIVKIQAGLKAFG--NDDMQLDGVVGARTKAAIKEFQSLFGLPQTGEPDE 257


>gi|229551218|ref|ZP_04439943.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|258541025|ref|YP_003175524.1| peptidoglycan-binding protein [Lactobacillus rhamnosus Lc 705]
 gi|229315381|gb|EEN81354.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|257152701|emb|CAR91673.1| Peptidoglycan-binding protein [Lactobacillus rhamnosus Lc 705]
          Length = 701

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 14/129 (10%)

Query: 48  VNDRFDNFLARVDMGIDSDIPIISKE---TIAQTEKAIAFYQDILSRG-GWPELPI---- 99
           V    +   + V        P   +    TI      +     I + G G+ +       
Sbjct: 9   VQKWLNKTYSSVSGFT--TAPENGQTGWPTIYSLRMGLQHEIGISAIGEGFGDATKTALA 66

Query: 100 ---RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
                L  G      Q ++      G ++P    +  F    E A K  Q   G+  +G+
Sbjct: 67  SVVGSLKPGYKGNIAQLIQGAFWCKG-INPGSDFNQDFSDATEQAFKTLQQNAGITANGV 125

Query: 157 VDSSTLEAM 165
           V  + + A+
Sbjct: 126 VTVNLMAAL 134


>gi|184156152|ref|YP_001844492.1| cell surface protein [Lactobacillus fermentum IFO 3956]
 gi|183227496|dbj|BAG28012.1| cell surface protein [Lactobacillus fermentum IFO 3956]
          Length = 231

 Score = 41.6 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 20/145 (13%)

Query: 230 ILHSRINRIMFNPYWVIPRSIIQKDMMALL--RQDPQYLKDNNIHMID-----EKGKEVF 282
           I+ + I+    +     P      D+   +  ++   YL DN   +         GK   
Sbjct: 80  IMRTPIDWQKSSETVAYPDVNAHPDLWIKVSKKKQRVYLIDNGKILYTMYCSTGTGKNDT 139

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN--------N 334
                +   E   + + Q  G+    A   + + +      H  P     N         
Sbjct: 140 PTGTYYIQAERGTYFYSQQSGEG---AHYWVSWLNHGEYLFHSVPTDESGNYKLSEAKQL 196

Query: 335 VVRFETSGCVRVRNIIDLDVWLLKD 359
             +  + GCVR+        W  ++
Sbjct: 197 GKKAASHGCVRLSVPD--AKWFYEN 219


>gi|260757107|ref|ZP_05869455.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella
           abortus bv. 6 str. 870]
 gi|260677215|gb|EEX64036.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella
           abortus bv. 6 str. 870]
          Length = 300

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 247 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 299


>gi|228943446|ref|ZP_04105890.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228976299|ref|ZP_04136770.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228783403|gb|EEM31511.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228816226|gb|EEM62407.1| Cell wall biogenesis enzyme (N-terminal domain to
           N-Acetylmuramoyl-L-alanine amidase [Bacillus
           thuringiensis serovar berliner ATCC 10792]
          Length = 277

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G++   V  L+  LI  G       ++  FD       K+FQ +  L P+G+V+ +
Sbjct: 6   TLKFGSTGYYVTVLQLNLIGLGVNYEKLTITGFFDEKTNKYTKIFQEKTKLKPNGIVEVN 65

Query: 161 TLEAMNVPV---DLRIRQLQVNLMRIKKLL 187
           T +++   V     +++ + +   ++  + 
Sbjct: 66  TWKSLFENVILIQKKLQSIGIYFGQLDGIF 95


>gi|227512734|ref|ZP_03942783.1| periplasmic protease [Lactobacillus buchneri ATCC 11577]
 gi|227084059|gb|EEI19371.1| periplasmic protease [Lactobacillus buchneri ATCC 11577]
          Length = 344

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------VDLRIRQLQVNLMRIKK 185
             ++     AV+ FQ RH L  +G V+ +T   M         +D  +  L+ N  + +K
Sbjct: 147 NKYNQATYYAVRQFQSRHHLKVTGNVNEATWLKMGFTKTSWTEIDSYVAPLKANAWQGRK 206

Query: 186 -LLEQKMGLRYVLVNIP 201
             ++  +   Y  +  P
Sbjct: 207 AHIDAMIHQAYRYMGKP 223


>gi|297744706|emb|CBI37968.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLD 152
             G+    +Q++++ L   G L     S+  +  FD  +ESA+K+FQ  + L+
Sbjct: 20  KKGDKMEGIQKVKQYLQRYGYLSSTHYSQTNTDEFDDALESAIKVFQTFYHLN 72


>gi|239817408|ref|YP_002946318.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
 gi|239803985|gb|ACS21052.1| ErfK/YbiS/YcfS/YnhG family protein [Variovorax paradoxus S110]
          Length = 374

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 12/66 (18%)

Query: 309 ASTKIEFYSRN---------NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
            +  I + +             ++H TP P  F+      + GCV + N  DL   L K 
Sbjct: 181 GALPINYPNPYDVRRGKTGSGIWLHGTP-PQQFSRAPLA-SDGCVVMANP-DLKQLLRKV 237

Query: 360 TPTWSR 365
               + 
Sbjct: 238 QIGATP 243


>gi|147768132|emb|CAN60605.1| hypothetical protein VITISV_020064 [Vitis vinifera]
          Length = 149

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLD 152
             G+    +Q++++ L   G L     S+  +  FD  +ESA+K+FQ  + L+
Sbjct: 38  KKGDKMEGIQKVKQYLQRYGYLSSTHYSQTNTDEFDDALESAIKVFQTFYHLN 90


>gi|319784577|ref|YP_004144053.1| peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170465|gb|ADV14003.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 265

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 48/155 (30%), Gaps = 20/155 (12%)

Query: 20  LPMGLSLVEKPIHASVLDEIINESY----HSIVNDRFDNFLARVDMGIDSDIPIISKETI 75
           + +G  +   P+        +   +    +++    F +  A       +  P  + +  
Sbjct: 23  VAVGGMISRNPVLVGGSTAFLVTLFYVSANALWYQPFPHAGAFFATRSIAGFPHATPDEP 82

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
             T        +I+   G P               V++++  L           +     
Sbjct: 83  ETTF-------NIVRPSGAPAPIKG-------DPVVEQVQGILKDLDFYS--GTVDGISG 126

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
                A++ +Q + GL+ SG +D+  L+ +     
Sbjct: 127 PNTRKAIQDYQQKVGLNTSGEIDALLLDQLGATPK 161



 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
              + +++  L   G  +    L     A  ++A+K FQ   GL  +G  D 
Sbjct: 203 DARIVKIQAGLKAFG--NDDMQLDGVVGARTKAAIKEFQSLFGLPQTGEPDE 252


>gi|284054148|ref|ZP_06384358.1| hypothetical protein AplaP_22106 [Arthrospira platensis str.
           Paraca]
 gi|291567772|dbj|BAI90044.1| peptidoglycan-binding domain 1 protein [Arthrospira platensis
           NIES-39]
          Length = 253

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  L   L I    +P    +  +     +AVK FQ R+ L  +G+ D+   + +   
Sbjct: 64  AIVSSLHNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRYDLPVTGVADTYVRDKLEDT 123

Query: 169 V 169
            
Sbjct: 124 A 124



 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 26/95 (27%), Gaps = 1/95 (1%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR  L   G   P    S   DA  +  ++ FQ    L   G+V   T   M   V   
Sbjct: 11  ELRFVLYGLGYGVPVNNDSPT-DAIAQQGIRAFQHDRNLVVDGIVGDKTQAEMAAIVSSL 69

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
              L + +     L   +         +       
Sbjct: 70  HNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRY 104


>gi|209964384|ref|YP_002297299.1| hypothetical protein RC1_1064 [Rhodospirillum centenum SW]
 gi|209957850|gb|ACI98486.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 226

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V+ +++ L   G    +      +     SA++ FQ        G V +  L A+ 
Sbjct: 168 VRNIQQELNRLGY--SAGKPDGLYGPSTRSAIEGFQKDRDQSVDGEVTADLLRALR 221


>gi|84499391|ref|ZP_00997679.1| peptidoglycan-binding protein, putative [Oceanicola batsensis
           HTCC2597]
 gi|84392535|gb|EAQ04746.1| peptidoglycan-binding protein, putative [Oceanicola batsensis
           HTCC2597]
          Length = 379

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +      L+ERL   G    + G S        +A++ +Q   GL  +G+   + L  
Sbjct: 320 GLTRADRIALQERLTARGY--DTGGTSGVIGPKSRAAIEAYQWDAGLGVTGVPSPALLAQ 377

Query: 165 MN 166
           + 
Sbjct: 378 LG 379


>gi|121602040|ref|YP_988744.1| peptidoglycan binding domain-containing protein [Bartonella
           bacilliformis KC583]
 gi|120614217|gb|ABM44818.1| peptidoglycan binding domain protein [Bartonella bacilliformis
           KC583]
          Length = 281

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 9/131 (6%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT--EKAIAFYQDILSR 91
             LD        +    +  N        I   +P  S + IA       +    D  ++
Sbjct: 148 GSLDNSKIHHAATQWEQKATNKTVPTQGDI---VPKQSADEIALLIERSEMEMANDTATK 204

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G   +     L        + +++E L   G  +    ++   D     AVK FQ    L
Sbjct: 205 GVVTQSEEASLKP--VIADIMQVQEALRAFG--NQEVTITGIEDQKTVDAVKQFQKIFHL 260

Query: 152 DPSGMVDSSTL 162
             +G +D++ L
Sbjct: 261 PITGKIDNTVL 271


>gi|115523515|ref|YP_780426.1| hypothetical protein RPE_1496 [Rhodopseudomonas palustris BisA53]
 gi|115517462|gb|ABJ05446.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 503

 Score = 41.6 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 22/67 (32%), Gaps = 12/67 (17%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N   +H  P P          + GCVR+    D    L   T    R  +  ++      
Sbjct: 126 NGIALHGGPLPGY------AASHGCVRM--PYDFAEKLFDKT----RIGMRVIIAPHDAA 173

Query: 379 PVKLATE 385
           PV+ A  
Sbjct: 174 PVEFAHP 180


>gi|320180157|gb|EFW55096.1| General secretion pathway protein A [Shigella boydii ATCC 9905]
          Length = 266

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L+  L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 169 WKMSPEGESTITRDSSEEEILWLKTMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 226

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 227 KTDGVVGFSTL 237


>gi|261216711|ref|ZP_05930992.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
 gi|260921800|gb|EEX88368.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
          Length = 174

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 121 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 173


>gi|170747515|ref|YP_001753775.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654037|gb|ACB23092.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium radiotolerans
           JCM 2831]
          Length = 212

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 5/60 (8%)

Query: 314 EFYSRNNTYMHDTPEPILFNNVVRFETSGCVR--VRNIIDLDVWLLKDTPTWSRYHIEEV 371
            F++     +H T          R  + GCVR  VRN   L   +       +R  IE  
Sbjct: 88  MFFTTQGHAIHGTNHVRSLG---RAASHGCVRLSVRNAATLFNLVKSQGMGRTRVVIEGA 144


>gi|167624318|ref|YP_001674612.1| lytic murein transglycosylase [Shewanella halifaxensis HAW-EB4]
 gi|167354340|gb|ABZ76953.1| lytic murein transglycosylase [Shewanella halifaxensis HAW-EB4]
          Length = 396

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+ +L   G             A     ++ +Q   GL   G  D +T +A+ V
Sbjct: 339 ARVKELQVQLNSQGY--DVGKPDGILGAKSVKGLQAYQKSQGLVADGYPDEATFKALKV 395


>gi|51891198|ref|YP_073889.1| putative carboxy-terminal processing proteinase [Symbiobacterium
           thermophilum IAM 14863]
 gi|51854887|dbj|BAD39045.1| putative carboxy-terminal processing proteinase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 465

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P +  R +  G+  + V  L+ERL + G           F      AV  F   HGL+  
Sbjct: 370 PLVADRVMTTGHVGLDVLGLQERLALLGY---RTDRDGYFKGQTTLAVLQFARDHGLNEV 426

Query: 155 GMVDSS 160
            MVD +
Sbjct: 427 PMVDKA 432


>gi|293381123|ref|ZP_06627140.1| NlpC/P60 family protein [Lactobacillus crispatus 214-1]
 gi|290922335|gb|EFD99320.1| NlpC/P60 family protein [Lactobacillus crispatus 214-1]
          Length = 375

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR--IRQLQVNLMRIKKL--- 186
             ++    +AVK FQ  H L  +G V+ +T E M         I      L         
Sbjct: 178 NYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKSWYSIDSYVAPLKAYAWQGRK 237

Query: 187 --LEQKMGLRYVLVNIP 201
             +E  +   Y  +  P
Sbjct: 238 AHIEAMINQAYKYMGKP 254


>gi|227879015|ref|ZP_03996910.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|256844233|ref|ZP_05549719.1| periplasmic protease [Lactobacillus crispatus 125-2-CHN]
 gi|256849367|ref|ZP_05554800.1| periplasmic protease [Lactobacillus crispatus MV-1A-US]
 gi|312977013|ref|ZP_07788762.1| peptidoglycan binding domain-containing protein [Lactobacillus
           crispatus CTV-05]
 gi|227861386|gb|EEJ69010.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01]
 gi|256613311|gb|EEU18514.1| periplasmic protease [Lactobacillus crispatus 125-2-CHN]
 gi|256714143|gb|EEU29131.1| periplasmic protease [Lactobacillus crispatus MV-1A-US]
 gi|310896341|gb|EFQ45406.1| peptidoglycan binding domain-containing protein [Lactobacillus
           crispatus CTV-05]
          Length = 380

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR--IRQLQVNLMRIKKL--- 186
             ++    +AVK FQ  H L  +G V+ +T E M         I      L         
Sbjct: 183 NYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKSWYSIDSYVAPLKAYAWQGRK 242

Query: 187 --LEQKMGLRYVLVNIP 201
             +E  +   Y  +  P
Sbjct: 243 AHIEAMINQAYKYMGKP 259


>gi|332976083|gb|EGK12951.1| N-acetylmuramoyl-L-alanine amidase [Desmospora sp. 8437]
          Length = 310

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 9/130 (6%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRH---GLDPSG 155
               +G S  +V+ L ERL+  G     K G    F    + A   FQ      G D  G
Sbjct: 178 SAFQIGKSHPAVKVLGERLVTHGFGSYYKVGPGPTFTEVDKKACAAFQRAQGWSGSDADG 237

Query: 156 MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGL 215
                T E +           +                 ++ V+     + A ++ K  +
Sbjct: 238 FPGPVTWERLMKQAKG-----EKKPAPKPTPQPDPKKDDWIRVSHNGKQVNAFKDPKNAV 292

Query: 216 RSTVIVGRVD 225
           R      +  
Sbjct: 293 REVEKYAKPG 302


>gi|224543426|ref|ZP_03683965.1| hypothetical protein CATMIT_02635 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523653|gb|EEF92758.1| hypothetical protein CATMIT_02635 [Catenibacterium mitsuokai DSM
           15897]
          Length = 216

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
            GN   +V  L+  L + G    + G++  +     +AVK +Q   GL  +G++D    
Sbjct: 79  PGN--PNVCILQCALFVKGY--NAGGITGVYYTAGVNAVKQYQEDAGLPVTGIIDWKVW 133


>gi|15896489|ref|NP_349838.1| spore cortex-lytic protein [Clostridium acetobutylicum ATCC 824]
 gi|15026317|gb|AAK81178.1|AE007820_4 Spore cortex-lytic enzyme, pre-pro-form (diverged form of
           N-acetylmuramyl-L-alanine amidase);
           peptidoglycan-binding domain [Clostridium acetobutylicum
           ATCC 824]
 gi|325510648|gb|ADZ22284.1| Spore cortex-lytic enzyme, pre-pro-form (diverged form of
           N-acetylmuramyl-L-alanine amidase) [Clostridium
           acetobutylicum EA 2018]
          Length = 437

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)

Query: 98  PIRPLHLGNSSVSVQRLRERL-IISGDLD--PSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P   L +G++ + V+ ++  L  IS +    P   ++  F     ++V+ FQ    +  +
Sbjct: 324 PGYALRVGSTGIPVRTIQTYLNRISNNYSAIPKVAVTSTFGTETRNSVQAFQRIFNIPVT 383

Query: 155 GMVDSSTLEAMN 166
           G+VD  T   ++
Sbjct: 384 GVVDYGTWYRIS 395


>gi|307825598|ref|ZP_07655816.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
 gi|307733484|gb|EFO04343.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacter tundripaludum
           SV96]
          Length = 168

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
            Y+H  P+ ++  +     + GC+R++N   L
Sbjct: 124 IYIHGCPDELMNGSPE---SHGCIRMKNADVL 152


>gi|260769526|ref|ZP_05878459.1| VgrG protein [Vibrio furnissii CIP 102972]
 gi|260614864|gb|EEX40050.1| VgrG protein [Vibrio furnissii CIP 102972]
          Length = 1073

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 11/73 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH----------- 149
               G+    V+ +++ LI  G    + G   +F +  E  VK+FQ  +           
Sbjct: 747 SYKTGSKGQEVELIQKALIKLGFDLGTYGADGSFGSTTERQVKMFQQSYTPSHSTHPDYK 806

Query: 150 GLDPSGMVDSSTL 162
                G+V   TL
Sbjct: 807 VGKADGIVGQGTL 819


>gi|260464330|ref|ZP_05812522.1| lytic murein transglycosylase [Mesorhizobium opportunistum WSM2075]
 gi|259029954|gb|EEW31238.1| lytic murein transglycosylase [Mesorhizobium opportunistum WSM2075]
          Length = 392

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 28/89 (31%), Gaps = 7/89 (7%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           T A T   +A         G   L  R    G  +  ++ L+ +L   G       +   
Sbjct: 308 TYALTAANLA-----ARLDGAQPLDPRSPEPGLDNNQMKALQTKLEARGY--DVGTVDGI 360

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                  AV+  QMR GL   G      L
Sbjct: 361 LGTNTREAVRKEQMRLGLPVDGWPTPELL 389


>gi|254715008|ref|ZP_05176819.1| Putative peptidoglycan binding domain 1 [Brucella ceti M13/05/1]
          Length = 184

 Score = 41.6 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 131 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLSVLRR 183


>gi|209526749|ref|ZP_03275271.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
 gi|209492793|gb|EDZ93126.1| Peptidoglycan-binding domain 1 protein [Arthrospira maxima CS-328]
          Length = 253

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V  L   L I    +P    +  +     +AVK FQ R+ L  +G+ D+   + +   
Sbjct: 64  AIVSSLHNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRYDLPVTGVADTYVRDKLEDT 123

Query: 169 V 169
            
Sbjct: 124 A 124



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 26/95 (27%), Gaps = 1/95 (1%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            LR  L   G   P    S   DA  +  ++ FQ    L   G+V   T   M   V   
Sbjct: 11  ELRFVLYGLGYGVPVNNDSPT-DAIAQQGIRAFQHDRNLVVDGIVGDKTQAEMAAIVSSL 69

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
              L + +     L   +         +       
Sbjct: 70  HNHLNIVVRPNPPLPGNQFYGPKTTAAVKDFQKRY 104


>gi|194754836|ref|XP_001959700.1| GF11910 [Drosophila ananassae]
 gi|190620998|gb|EDV36522.1| GF11910 [Drosophila ananassae]
          Length = 585

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D  T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQQTWVSAIQEFQNFAGLNITGELDEETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 + R ++  +   R +
Sbjct: 97  DRVGNGEGRSKRYALQGSRWR 117


>gi|121594204|ref|YP_986100.1| lytic murein transglycosylase [Acidovorax sp. JS42]
 gi|120606284|gb|ABM42024.1| lytic murein transglycosylase [Acidovorax sp. JS42]
          Length = 474

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP    R L   + S  V+ L+E L   G    +            + V+ +Q   GL  
Sbjct: 407 WP----RELQPLSRS-EVRALQEALNARGL--DTGTPDGVAGPATRAGVRRYQQSVGLPA 459

Query: 154 SGMVDSSTLEAMNVP 168
            G      L+ +  P
Sbjct: 460 DGYATRELLQRLLTP 474


>gi|328770924|gb|EGF80965.1| hypothetical protein BATDEDRAFT_88038 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1001

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 115 RERLIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           R RL   G   P        D   +   VK FQ   GL+ + ++D  T   M+     R
Sbjct: 299 RSRLTALGYPPPKGVH--LSDPNSLRKQVKHFQRTVGLEVTMVLDKRTRTKMDSNTTGR 355


>gi|254510501|ref|ZP_05122568.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221534212|gb|EEE37200.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 430

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 19/82 (23%)

Query: 91  RGGWPELPIRPLHLGNSSVSV------QRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
           + GWP               V      + L+ RL  +G    +KG+         +AV+ 
Sbjct: 362 QTGWP-----------RGDRVLSFAERKELQRRLTQAGF--DTKGIDGRTGPNTINAVRA 408

Query: 145 FQMRHGLDPSGMVDSSTLEAMN 166
           FQ+  GL P G    S LE M 
Sbjct: 409 FQVAQGLVPDGYPTLSLLERMR 430


>gi|189346361|ref|YP_001942890.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium limicola DSM 245]
 gi|189340508|gb|ACD89911.1| ErfK/YbiS/YcfS/YnhG family protein [Chlorobium limicola DSM 245]
          Length = 257

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 27/91 (29%), Gaps = 25/91 (27%)

Query: 288 WNSPEPPNFIFRQDPGK---------------INAMASTKIEFYSRNNTYMHDTPEPILF 332
           W         +R  PGK                NA     I FY     +MH   +  L 
Sbjct: 168 WGPVSSGRKTYRTPPGKFFVNYKQRHKLSIKYDNAPMPFSINFYG--GYFMH---QQSLP 222

Query: 333 NNVVRFETSGCVR--VRNIIDLDVWLLKDTP 361
                  + GCVR  + +   L  W+    P
Sbjct: 223 GYP---ASHGCVRLLMTDAEKLFNWVKPRDP 250


>gi|167745912|ref|ZP_02418039.1| hypothetical protein ANACAC_00606 [Anaerostipes caccae DSM 14662]
 gi|167654427|gb|EDR98556.1| hypothetical protein ANACAC_00606 [Anaerostipes caccae DSM 14662]
          Length = 322

 Score = 41.6 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 31/98 (31%), Gaps = 15/98 (15%)

Query: 72  KETIAQTEKAIAF--YQDILSRGGWPE-----LPIRPLHLGNSSVSVQRLRERLIISGDL 124
           K ++   +KAI    Y  +   G         +    +  G     V+ ++         
Sbjct: 228 KTSVVALQKAINKDKYAKLSVNGKLDAKTKNAMKKIVIRSGKRGEVVKFVQG-------- 279

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                      +    A+K +Q +H L   GM   +TL
Sbjct: 280 KVGTTKDGICGSKTVKAIKAYQRKHNLKVDGMAGYNTL 317


>gi|195586513|ref|XP_002083018.1| GD24926 [Drosophila simulans]
 gi|194195027|gb|EDX08603.1| GD24926 [Drosophila simulans]
          Length = 536

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 66  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 125

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 126 DRVGTGDSRSKRYALQGSRWR 146


>gi|171913441|ref|ZP_02928911.1| ErfK/YbiS/YcfS/YnhG family protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 536

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 37/170 (21%), Gaps = 24/170 (14%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                        I    L+  + G++     V   R   +                W +
Sbjct: 366 PLADASEPVTASIIALTRLQIYKAGRLVAVMPVASARPGLRGRNF------------WTV 413

Query: 247 PRSIIQKDMM-ALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
             +I    +      +DP      +  +          E V   +            G  
Sbjct: 414 LDAIPAPRLATLQEDRDPPKAPA-SPVISIGASSIPTPEAVPPKAKLEEEQFL--GSGPN 470

Query: 306 NAMASTKIEFYSRNN-----TYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           N +    I              +H T  P   N+       G  R+ N  
Sbjct: 471 NPVGVVWINLARGKGAEPLPFGLHGTSIPAKMNSQEGL---GGFRLTNWD 517


>gi|224541178|ref|ZP_03681717.1| hypothetical protein CATMIT_00331 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525929|gb|EEF95034.1| hypothetical protein CATMIT_00331 [Catenibacterium mitsuokai DSM
           15897]
          Length = 487

 Score = 41.2 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 50/207 (24%), Gaps = 80/207 (38%)

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVIPR 248
           +G  Y+ V++    L   +NG+  L+S  + G++  DR TP     +     N       
Sbjct: 348 LGGNYIEVDLSRQHLWIYKNGQCVLQSDCVSGKMTRDRYTPAGTYYVYSKERN------- 400

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAM 308
                                   ++      V              + +          
Sbjct: 401 -----------------------RVLRGTKDPVT-----------GKYPYESPV------ 420

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFE---TSGCVRVRNIIDLDVWLLKDTPTWSR 365
            S  + F        HD      F     +    + GCV +   +               
Sbjct: 421 -SYWMPFN--RGIGFHDANWRNKFG-GNLYVNGGSHGCVNL--PVGFA------------ 462

Query: 366 YHIEEVVKTRKTTPVKLATEVPVHFVY 392
             +   + T           +PV   Y
Sbjct: 463 GTMYNTITTG----------MPVVIYY 479


>gi|320528722|ref|ZP_08029874.1| peptidase [Solobacterium moorei F0204]
 gi|320130932|gb|EFW23510.1| peptidase [Solobacterium moorei F0204]
          Length = 513

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 2/46 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L   G           F +  E A++ F+   G+   G++D  T  
Sbjct: 441 LDYLGY--SVGRTDGYFSSQTEDALRQFETDKGIKADGVLDKETFS 484


>gi|255308768|ref|ZP_05352939.1| hypothetical protein CdifA_19448 [Clostridium difficile ATCC 43255]
          Length = 202

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                F     +AVK  Q + GL   G+V  +T EA   
Sbjct: 161 STDGQFGPATYNAVKSLQGKLGLTKDGIVGKNTWEAAGK 199


>gi|315079336|gb|EFT51337.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL053PA2]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKGFQRANALKQTGVTDAVTL 198


>gi|304393565|ref|ZP_07375493.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
 gi|303294572|gb|EFL88944.1| peptidoglycan-binding domain 1 protein [Ahrensia sp. R2A130]
          Length = 262

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            ++  L + G       L   + +    A+  FQ   GL   G      L  + +    +
Sbjct: 106 EVQTALSVRGYY--GGKLDGVYGSRTRKAITAFQTDTGLAKDGKPSVRLLTQILMSASAQ 163

Query: 173 IRQLQV 178
             ++ +
Sbjct: 164 TDRVPL 169


>gi|157278503|ref|NP_001098353.1| membrane-type matrix metalloproteinase [Oryzias latipes]
 gi|46359589|dbj|BAD15297.1| membrane-type matrix metalloproteinase [Oryzias latipes]
          Length = 658

 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +            +  AV   Q  +GL  +G +D  T+ AM  P     D 
Sbjct: 43  LRMYGYLPQASRQMSTMRSSQILSDAVSDMQRFYGLQVTGQMDPQTISAMKRPRCGVPDK 102

Query: 172 RIRQLQVNLMRIK 184
              Q++ N+ R +
Sbjct: 103 FGGQIKTNVRRKR 115


>gi|317968892|ref|ZP_07970282.1| ErfK/YbiS/YcfS/YnhG superfamily protein [Synechococcus sp. CB0205]
          Length = 127

 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 9/54 (16%)

Query: 321 TYMHDTP----EPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             MH  P        F       + GC+R+ +      WL ++TP  +   I+ 
Sbjct: 79  ICMHGAPWQEQANEAFGVPR---SHGCIRIPSPH--ARWLFENTPKGTPVSIQA 127


>gi|302551661|ref|ZP_07304003.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
 gi|302469279|gb|EFL32372.1| membrane protein [Streptomyces viridochromogenes DSM 40736]
          Length = 510

 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 8/78 (10%)

Query: 96  ELPIRP----LHLGNSSVSVQRLRERLIISGDLD-PSKGLSVAFDAYVESAVKLFQMRHG 150
           ++P  P       G ++  + R+R +L+  G     +      +      AV+ FQ   G
Sbjct: 431 DVPGYPGRAMFRPGEANPHITRMRRQLVRKGFGRFYTAEPGPRWSEADRRAVEAFQRTQG 490

Query: 151 ---LDPSGMVDSSTLEAM 165
                  G     T   +
Sbjct: 491 WRGGAADGFPGPETWRRL 508


>gi|313836530|gb|EFS74244.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA2]
 gi|314928984|gb|EFS92815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL044PA1]
 gi|314971123|gb|EFT15221.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA3]
 gi|328906571|gb|EGG26346.1| lipoprotein A-like protein [Propionibacterium sp. P08]
          Length = 361

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ T ++
Sbjct: 142 GDHNARSKVVQRDLSTLNYFPA-KWVGLPYGPATTNAVKVFQRANALKQTGVTDAVT-QS 199

Query: 165 MNVPVDLRIRQLQVNLMR 182
           +        RQ   +  +
Sbjct: 200 LLKSKANYQRQRAASAEK 217


>gi|298490390|ref|YP_003720567.1| OpcA protein ['Nostoc azollae' 0708]
 gi|298232308|gb|ADI63444.1| OpcA protein ['Nostoc azollae' 0708]
          Length = 457

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           L  +G       +        +SA++  Q +H L  +G     TL A+ 
Sbjct: 65  LTATGFYH--GPIDGILGPQTQSALREVQKKHHLPETGSATPETLTALR 111


>gi|218510707|ref|ZP_03508585.1| hypothetical protein RetlB5_26753 [Rhizobium etli Brasil 5]
          Length = 98

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           V+ +++ L   G    +      + A   +A+K FQ  H L P+G+V   +L A+  P
Sbjct: 40  VRDVQKALAEQGF--DAGVADGIWGAKSIAALKGFQRAHDLIPTGVVTQDSLRALFPP 95


>gi|170742496|ref|YP_001771151.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium sp. 4-46]
 gi|168196770|gb|ACA18717.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium sp. 4-46]
          Length = 249

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPE--------- 96
                +    +A +   I +  PI +   +  ++ A A  QD      W           
Sbjct: 109 PYPEAQVAAVIA-LSRDILARWPIRADRVLGHSDVAPARKQDPGETFPWARLHREGIGHF 167

Query: 97  LPIRPLH------LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +P  P+        G++   ++ L+    + G     + ++  FD+ + + V+ FQ    
Sbjct: 168 VPPVPIRDGRFFAEGDAGQPIEALQAMFALYGY---DQPVTGRFDSGMRAVVEAFQRHFR 224

Query: 151 LD-PSGMVDSSTL 162
            +   G+ DSST+
Sbjct: 225 PERVDGVADSSTI 237


>gi|262047872|ref|ZP_06020820.1| periplasmic protease [Lactobacillus crispatus MV-3A-US]
 gi|260571816|gb|EEX28389.1| periplasmic protease [Lactobacillus crispatus MV-3A-US]
          Length = 380

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 7/77 (9%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR--IRQLQVNLMRIKKL--- 186
             ++    +AVK FQ  H L  +G V+ +T E M         I      L         
Sbjct: 183 NYYNQATYNAVKNFQRSHHLPATGNVNLATWEKMGFSKKSWYSIDSYVAPLKAYAWQGRK 242

Query: 187 --LEQKMGLRYVLVNIP 201
             +E  +   Y  +  P
Sbjct: 243 AHIEAMINQAYKYMGKP 259


>gi|149915539|ref|ZP_01904065.1| hypothetical protein RAZWK3B_06277 [Roseobacter sp. AzwK-3b]
 gi|149810431|gb|EDM70274.1| hypothetical protein RAZWK3B_06277 [Roseobacter sp. AzwK-3b]
          Length = 389

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G S   ++ L+ +L   G      G+     A   +AV+  Q   GL 
Sbjct: 319 GAPVFEAGNPAEGLSGEDMKALQRKLAARGY--DVGGIDGILGAGTRAAVQDVQQELGLP 376

Query: 153 PS 154
             
Sbjct: 377 AD 378


>gi|314924447|gb|EFS88278.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL001PA1]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|227509795|ref|ZP_03939844.1| periplasmic protease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190719|gb|EEI70786.1| periplasmic protease [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 344

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------VDLRIRQLQVNLMRIK 184
             ++     AV+ FQ RH L  +G V+ +T   M         +D  +  L+ N  + +
Sbjct: 147 NKYNQATYHAVRQFQSRHHLKVTGNVNEATWLKMGFTKTSWTGIDSYVAPLKANAWQGR 205


>gi|118590236|ref|ZP_01547639.1| hypothetical protein SIAM614_11998 [Stappia aggregata IAM 12614]
 gi|118437208|gb|EAV43846.1| hypothetical protein SIAM614_11998 [Stappia aggregata IAM 12614]
          Length = 276

 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 22/133 (16%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK------GLSVAFDAY 137
             +   +   W       L  G+S   V  ++  LI  G   P             +   
Sbjct: 13  QLEAAATNSPW-------LGSGSSGHGVHLVQFGLIELGFPMPKSVGGTGLSPDGIYGNE 65

Query: 138 VESAVKLFQM-RHG---LDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
               VK FQ   HG   ++  G V  +T+  +      R      + +R+   +      
Sbjct: 66  TVQKVKEFQRSSHGGPPINDDGAVGRNTMAKL-----DRALPFLTHKVRVHIFVVVTPDA 120

Query: 194 RYVLVNIPAASLE 206
                   A  L 
Sbjct: 121 PISTAESTAKELY 133


>gi|254295252|ref|YP_003061275.1| peptidoglycan-binding protein [Hirschia baltica ATCC 49814]
 gi|254043783|gb|ACT60578.1| Peptidoglycan-binding domain 1 protein [Hirschia baltica ATCC
           49814]
          Length = 497

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            S+  L+  L   G       +        E AV+ FQ  +GL   G V   T+ 
Sbjct: 267 SSISDLQIALRDRGFYS--GPIDGIIGTQTEEAVRQFQAANGLPHQGFVTMETMR 319


>gi|332652764|ref|ZP_08418509.1| penicillin-resistant DD-carboxypeptidase [Ruminococcaceae bacterium
           D16]
 gi|332517910|gb|EGJ47513.1| penicillin-resistant DD-carboxypeptidase [Ruminococcaceae bacterium
           D16]
          Length = 176

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 19/50 (38%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            RL       P   +   F      AV LFQ       +G+VD  T +A+
Sbjct: 23  WRLATRYPFLPKLAMDGLFGEETLEAVMLFQREMAPPVTGVVDQRTWDAI 72


>gi|317050819|ref|YP_004111935.1| lytic murein transglycosylase [Desulfurispirillum indicum S5]
 gi|316945903|gb|ADU65379.1| lytic murein transglycosylase [Desulfurispirillum indicum S5]
          Length = 415

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 6/75 (8%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V  L++RL   G  D          A   +AV+ FQ    +        + LE +    
Sbjct: 346 EVLELQQRLAALGLYDAEAT--GRIGAQTRNAVRQFQQMVKVPADAYPTHALLEQLR--- 400

Query: 170 DLRIRQLQVNLMRIK 184
             R + + V L R+ 
Sbjct: 401 -QRQQDVTVELSRVD 414


>gi|261323654|ref|ZP_05962851.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
 gi|261299634|gb|EEY03131.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
          Length = 399

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L 
Sbjct: 346 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLS 394


>gi|225016924|ref|ZP_03706116.1| hypothetical protein CLOSTMETH_00837 [Clostridium methylpentosum
           DSM 5476]
 gi|224950318|gb|EEG31527.1| hypothetical protein CLOSTMETH_00837 [Clostridium methylpentosum
           DSM 5476]
          Length = 146

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 99  IRPLHLGNSSVSV---QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            + L  GN    V   Q+LR  + I     P +      D   + A+  FQ+ + L P G
Sbjct: 51  SKILEEGNIGAEVRPVQQLRAVINIPDGQIPVRIQDRIVDQNRKDALTTFQLWYALVPDG 110

Query: 156 MVDSSTLEAMNVPVDL 171
           ++D  T   +N P   
Sbjct: 111 VLDRETWNKINEPPSP 126


>gi|282854958|ref|ZP_06264292.1| lipoprotein A-like protein [Propionibacterium acnes J139]
 gi|282582104|gb|EFB87487.1| lipoprotein A-like protein [Propionibacterium acnes J139]
 gi|314967174|gb|EFT11273.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL082PA2]
 gi|314981567|gb|EFT25661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA3]
 gi|315092330|gb|EFT64306.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA4]
 gi|327328748|gb|EGE70508.1| lipoprotein A family protein [Propionibacterium acnes HL103PA1]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|170740072|ref|YP_001768727.1| lytic murein transglycosylase [Methylobacterium sp. 4-46]
 gi|168194346|gb|ACA16293.1| lytic murein transglycosylase [Methylobacterium sp. 4-46]
          Length = 391

 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 24/80 (30%), Gaps = 3/80 (3%)

Query: 91  RGGWPELPIRPLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
            GG P     P+      +  +  L+  L           L       +  AV+ +Q   
Sbjct: 314 AGGGPLAAPWPIRAPRLDAAGLAALQRGLAARDLYA--GPLDGRAGPKLREAVRRYQTAA 371

Query: 150 GLDPSGMVDSSTLEAMNVPV 169
           GL   G    + L+ +    
Sbjct: 372 GLPADGYATPALLDHLRRAP 391


>gi|126737297|ref|ZP_01753032.1| peptidoglycan binding domain protein [Roseobacter sp. SK209-2-6]
 gi|126721882|gb|EBA18585.1| peptidoglycan binding domain protein [Roseobacter sp. SK209-2-6]
          Length = 673

 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 97/287 (33%), Gaps = 32/287 (11%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
            L +  +L  +       +        ++V ++  + +  +     +  P+    T A  
Sbjct: 176 FLALADNLRSQFYPLGAGNT--QTPVATLVQNQIQSQIEALSETQPTAEPVAEPATPALP 233

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
           ++  A  +               L   +     + L+  L  +G       +  AF    
Sbjct: 234 DETRAEARR----------SESRL---SRDER-KDLQIALKAAGFYS--AAIDGAFGRGT 277

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
             ++  +Q   GL+P+G++ ++  + +    +  +  + V + R++ L         + +
Sbjct: 278 RRSMSDWQATRGLEPTGVLTTAQRQMLLDEYNAPL--ISVGMARVQDLKAG------IAL 329

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMAL 258
            IPA  +   ++ +         G +  +  ++  R ++      + I   +   +++  
Sbjct: 330 EIPAGEVT-FDHYEPPFAHYNASGDLGARVLLISQRGDKRTLYGLYDI---MQTLEIVP- 384

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKI 305
             + P+  + N+  +    GK V   +    + E   F      G  
Sbjct: 385 -LEGPRSREGNSFTLEGRDGKIVSHTQASLKNGEIKGFTLIWPAGDE 430


>gi|315104685|gb|EFT76661.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA2]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAITL 198


>gi|114707783|ref|ZP_01440677.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
 gi|114536772|gb|EAU39902.1| Lytic murein transglycosylase [Fulvimarina pelagi HTCC2506]
          Length = 1068

 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             +  +++RL   G    S        A   + V  +Q  +GL  +G +D + L  + 
Sbjct: 141 ADIALVQDRLHALGYDVGSA--DGIAGARTLAGVSRYQTENGLVVTGQLDRALLSHIK 196


>gi|186684152|ref|YP_001867348.1| OpcA protein [Nostoc punctiforme PCC 73102]
 gi|1352642|sp|P48971|OPCA_NOSP7 RecName: Full=Putative OxPP cycle protein opcA
 gi|558506|gb|AAA50771.1| putative OxPPCycle gene [Nostoc sp.]
 gi|186466604|gb|ACC82405.1| OpcA protein [Nostoc punctiforme PCC 73102]
 gi|1094846|prf||2106403D opcA gene
          Length = 465

 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 2/45 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           L   G    +  +       + +A++  Q +H L  +G     TL
Sbjct: 77  LAALGFY--NGPIDGILGPQMAAALREVQKKHKLPETGTATQETL 119


>gi|268317590|ref|YP_003291309.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
 gi|262335124|gb|ACY48921.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodothermus marinus DSM 4252]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 22/90 (24%), Gaps = 9/90 (10%)

Query: 276 EKGKEVFVEEVD-WNSPEPPNFIFRQDPGKINAMASTK-IEFYSRNNTYMHDTPEPILFN 333
             G          +N      +                   F+     ++H  P P    
Sbjct: 157 NTGAPDNPTPNGRFNFNWKEEYRVSSLSPPGEPWEMYWVFNFHDARGIHVHQYPMP---- 212

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
                ++ GCVR+ +      W+      W
Sbjct: 213 -TGGPDSHGCVRLIDAD--AKWVFHWADPW 239


>gi|289665049|ref|ZP_06486630.1| transglycosylase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 425

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNV 167
            +  
Sbjct: 421 RLRA 424


>gi|256059683|ref|ZP_05449878.1| Putative peptidoglycan binding domain 1 [Brucella neotomae 5K33]
          Length = 382

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            L+  L   G  D +  +     A   +A++ FQ R+GL+P G      L 
Sbjct: 329 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPDGHPSKEVLS 377


>gi|239979465|ref|ZP_04701989.1| hypothetical protein SalbJ_08518 [Streptomyces albus J1074]
          Length = 134

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRH--GLD 152
            +    G++   V+ ++  +  +    G    +  +   + A   SAV+ FQ ++     
Sbjct: 56  AKWAEYGSTGAHVKEIQALINGTTTYYGTHGKALAVDGIYGAGTRSAVRWFQQKYIGASA 115

Query: 153 PSGMVDSSTLEAMN 166
             G+V   T +A+ 
Sbjct: 116 VDGIVGPRTWDALR 129


>gi|303272007|ref|XP_003055365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463339|gb|EEH60617.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 576

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 1/104 (0%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
                +      AV+ +Q+ +GL P+G     +  A  +     I  L         +  
Sbjct: 76  KTDGIYGRDTAEAVEAWQVMNGLAPTGYFGPKSRAAFIMN-SEPISGLAAPARLDLAMAP 134

Query: 189 QKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
                   +V  P+     V        +  +        P+++
Sbjct: 135 TSSAPPPSVVASPSHVPAYVPVYVPSQTARGVGVANGGGAPMMN 178


>gi|227903913|ref|ZP_04021718.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
           4796]
 gi|227868304|gb|EEJ75725.1| conserved hypothetical protein [Lactobacillus acidophilus ATCC
           4796]
          Length = 208

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            RL   G           ++    +AVK FQ  H L  +G V+  T + +   
Sbjct: 2   HRLGTWG-------GHNYYNQATYNAVKNFQKNHNLPATGNVNLKTWQKLGFS 47


>gi|254485842|ref|ZP_05099047.1| Putative peptidoglycan binding domain protein [Roseobacter sp.
           GAI101]
 gi|214042711|gb|EEB83349.1| Putative peptidoglycan binding domain protein [Roseobacter sp.
           GAI101]
          Length = 486

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 36/72 (50%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +S ++    ++L+    L      + AFD    +++K +Q+  GL P+G++D + L+ + 
Sbjct: 9   TSSTIVLEAQKLLNQSALQSRAPENGAFDKSTLNSIKQYQLESGLRPTGILDKTLLDNLR 68

Query: 167 VPVDLRIRQLQV 178
               +   + Q+
Sbjct: 69  KSAKISNPKYQI 80


>gi|153011588|ref|YP_001372802.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
 gi|151563476|gb|ABS16973.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
          Length = 412

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     +   +A++ FQ R+GL P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGSTSRAAIEAFQQRNGLQPDGHPSKEVLSVLRR 411


>gi|289669825|ref|ZP_06490900.1| transglycosylase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 425

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNV 167
            +  
Sbjct: 421 RLRA 424


>gi|302873762|ref|YP_003842395.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|307689999|ref|ZP_07632445.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
 gi|302576619|gb|ADL50631.1| Peptidoglycan-binding domain 1 protein [Clostridium cellulovorans
           743B]
          Length = 447

 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 84  FYQDILSRG-GWPELPIRPLHLGNSSVSVQRLRERL--IISGD-LDPSKGLSVAFDAYVE 139
             + +   G   P  P  PL +G++   V+ ++  L  I +   L P   +     +  +
Sbjct: 316 RIRKLKKMGNLTPSYPGFPLQIGSTGEPVKIIQTSLNKIATHYPLIPKSNVDGNLGSVTK 375

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            A++ FQ    L  +G  + +T   ++
Sbjct: 376 KAIETFQGIFNLPKTGTANYATWHKIS 402


>gi|224536863|ref|ZP_03677402.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521529|gb|EEF90634.1| hypothetical protein BACCELL_01739 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 181

 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 6/54 (11%)

Query: 305 INAMASTKIEF--YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
             A     I           +H T  P       R  + GC+R+ N  DL   +
Sbjct: 109 DGAYGDFFIRLLVPGHKGIGIHGTHLPESIG--TRA-SEGCIRMYN-EDLKKLV 158


>gi|27377359|ref|NP_768888.1| hypothetical protein blr2248 [Bradyrhizobium japonicum USDA 110]
 gi|27350503|dbj|BAC47513.1| blr2248 [Bradyrhizobium japonicum USDA 110]
          Length = 520

 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+         L   T
Sbjct: 126 NGIALHGGPLPGY------AASHGCVRM--PFGFAEGLFDKT 159


>gi|315094697|gb|EFT66673.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL060PA1]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|209693664|ref|YP_002261592.1| putative cell wall degradation enzyme [Aliivibrio salmonicida
           LFI1238]
 gi|208007615|emb|CAQ77716.1| putative cell wall degradation enzyme [Aliivibrio salmonicida
           LFI1238]
          Length = 739

 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 15/83 (18%)

Query: 99  IRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR----HG 150
              +  G+        ++ ++E L+         G    F +  E AV  FQ      H 
Sbjct: 464 KGAIKKGDKDAPKSNEIKTIQEALLALNFDLGKYGADGDFGSGTEQAVIDFQREFVPTHE 523

Query: 151 L-------DPSGMVDSSTLEAMN 166
           +          G+V + TL A++
Sbjct: 524 VHPEYEMKKSDGVVGNQTLLALD 546


>gi|311070029|ref|YP_003974952.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus atrophaeus 1942]
 gi|310870546|gb|ADP34021.1| PDZ-containing carboxyl-terminal protease processing protease
           [Bacillus atrophaeus 1942]
          Length = 483

 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
            +PL L  ++  V+  +  L   G           F   ++ AV  FQ ++ L+ SG++D
Sbjct: 392 KQPLKLDMNNEDVKHAQVLLK--GLSFDPGRDDGYFSEGMKKAVLAFQDQNKLNKSGVID 449

Query: 159 SSTLEAMNV 167
             T E MN 
Sbjct: 450 QRTAEKMNQ 458


>gi|162448546|ref|YP_001610913.1| hypothetical protein sce0276 [Sorangium cellulosum 'So ce 56']
 gi|161159128|emb|CAN90433.1| hypothetical protein sce0276 [Sorangium cellulosum 'So ce 56']
          Length = 885

 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 117 RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           RL   G    +       D    ++++ FQ  H L+P+G +D +T
Sbjct: 833 RLKNLGYYRGAGK--GEIDDETRASLRRFQSDHALEPTGELDGAT 875


>gi|47523768|ref|NP_999520.1| epoxide hydrolase 1 [Sus scrofa]
 gi|75069447|sp|P79381|HYEP_PIG RecName: Full=Epoxide hydrolase 1; AltName: Full=Epoxide hydratase;
           AltName: Full=Microsomal epoxide hydrolase
 gi|1840391|dbj|BAA19200.1| epoxide hydrolase [Sus scrofa]
          Length = 454

 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 20/53 (37%)

Query: 342 GCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYIS 394
           GC    + + L  ++L+   TW+     ++          L   + V  +Y +
Sbjct: 310 GCALNDSPVGLAAYILEKFSTWTNEEFRDLEDGGLERKFSLDELLTVIMLYWT 362


>gi|330841023|ref|XP_003292505.1| hypothetical protein DICPUDRAFT_157221 [Dictyostelium purpureum]
 gi|325077253|gb|EGC30978.1| hypothetical protein DICPUDRAFT_157221 [Dictyostelium purpureum]
          Length = 285

 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 69/246 (28%), Gaps = 54/246 (21%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L+  L  +  L+ +  LS  FD+  E A+  FQ  + L  +G++D  T   +  
Sbjct: 39  GGDIYILQNLLTRTKGLE-NLSLSSNFDSDTEMALGKFQSLNNLKSTGVLDVETANLL-- 95

Query: 168 PVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA-------SLEAVE-NGKVGLRSTV 219
                   L++N     K   Q        V+IP         +    + +  V L+ TV
Sbjct: 96  --------LELNSADGYKDNGQIPPGFLYKVHIPVYKNRSIETTATLYDADLNVLLQFTV 147

Query: 220 IVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGK 279
                +       + + +  F      P                       +   D    
Sbjct: 148 RTHGQNNN----ATGLAQNEFCNSGNTPT---------------------GLMTFDLNSP 182

Query: 280 EVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-RNNTYMHDTPEPILFNNVVRF 338
           E    +              Q         +  I   + R+   MH    P     +   
Sbjct: 183 EPDPTDFGPYPIN----RAVQGIA-----GNAFIIISNIRDGILMHTGEWPDWNPTLPMP 233

Query: 339 ETSGCV 344
            + GCV
Sbjct: 234 NSHGCV 239


>gi|291451334|ref|ZP_06590724.1| predicted protein [Streptomyces albus J1074]
 gi|291354283|gb|EFE81185.1| predicted protein [Streptomyces albus J1074]
          Length = 138

 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 30/74 (40%), Gaps = 6/74 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIIS----GDLDPSKGLSVAFDAYVESAVKLFQMRH--GLD 152
            +    G++   V+ ++  +  +    G    +  +   + A   SAV+ FQ ++     
Sbjct: 60  AKWAEYGSTGAHVKEIQALINGTTTYYGTHGKALAVDGIYGAGTRSAVRWFQQKYIGASA 119

Query: 153 PSGMVDSSTLEAMN 166
             G+V   T +A+ 
Sbjct: 120 VDGIVGPRTWDALR 133


>gi|221066750|ref|ZP_03542855.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
 gi|220711773|gb|EED67141.1| ErfK/YbiS/YcfS/YnhG family protein [Comamonas testosteroni KF-1]
          Length = 438

 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 17/128 (13%)

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA----MASTKIE 314
             +D ++    N ++   K      EE D  +P+   FI RQ PG        + +  + 
Sbjct: 192 ANEDGRFRVVGNFYVSVGKLGLGKKEEGDQRTPQGLYFIGRQIPGMKLPEFYGLGALTMN 251

Query: 315 FYSRN---------NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           + +             ++H TP P  +  +    + GCV + N      +L++     + 
Sbjct: 252 YPNDWDRVVGRSGSGIWLHGTP-PDQYARLPEA-SDGCVVLANPD--LDFLMQTVERQTP 307

Query: 366 YHIEEVVK 373
             I   + 
Sbjct: 308 VLIRSSLH 315


>gi|195353242|ref|XP_002043114.1| GM11800 [Drosophila sechellia]
 gi|194127202|gb|EDW49245.1| GM11800 [Drosophila sechellia]
          Length = 610

 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 63  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 122

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 123 DRVGTGDSRSKRYALQGSRWR 143


>gi|241113037|ref|YP_002972872.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861245|gb|ACS58911.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 75

 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 6/76 (7%)

Query: 98  PIRPLHLGNSSV---SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P + L  GNS+     V +++  L   G    S       D    +A+   Q  + L  +
Sbjct: 3   PEKTL-PGNSNKFRRIVIQVQSGLPAYGYYAGSLT--GVVDEDTRAALSQMQKDNKLKVT 59

Query: 155 GMVDSSTLEAMNVPVD 170
           G V +  L A  +   
Sbjct: 60  GTVTTEVLNAFGIAAR 75


>gi|314961936|gb|EFT06037.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA2]
          Length = 343

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|313813705|gb|EFS51419.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL025PA1]
 gi|327335339|gb|EGE77049.1| lipoprotein A family protein [Propionibacterium acnes HL097PA1]
          Length = 343

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|297180603|gb|ADI16814.1| hypothetical protein [uncultured gamma proteobacterium
           HF0010_11K06]
          Length = 192

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                 Y+H T E  L        + GC+R++N  +I L   + K T
Sbjct: 144 SKSRYIYIHGTAEEGLIGEP---ASLGCIRMKNSDVIKLFNRVRKGT 187


>gi|163849618|ref|YP_001637661.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
 gi|163661223|gb|ABY28590.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium extorquens
           PA1]
          Length = 219

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/107 (10%), Positives = 28/107 (26%), Gaps = 19/107 (17%)

Query: 289 NSPEPPNFIFRQDPGKINAM-------ASTKIEFYSRNNTY-------MHDTPEPILFNN 334
            +       ++   G            +    +     + +       +H +        
Sbjct: 83  WAVSTGRAPYKTPAGTFRPFRLEKEHYSREWDDAPMPYSIFFTAAGHAIHASNATRQLG- 141

Query: 335 VVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
             R  + GCVR+   +   L   +  + P  ++  I       +T  
Sbjct: 142 --RPASHGCVRLAPSHAAALFTLVRAEGPGATKVTITNGASAGRTAR 186


>gi|50843612|ref|YP_056839.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           KPA171202]
 gi|289426002|ref|ZP_06427749.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
 gi|289427943|ref|ZP_06429647.1| lipoprotein A-like protein [Propionibacterium acnes J165]
 gi|295131694|ref|YP_003582357.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
 gi|50841214|gb|AAT83881.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           KPA171202]
 gi|289153545|gb|EFD02259.1| lipoprotein A-like protein [Propionibacterium acnes SK187]
 gi|289158826|gb|EFD07026.1| lipoprotein A-like protein [Propionibacterium acnes J165]
 gi|291377050|gb|ADE00905.1| lipoprotein A-like protein [Propionibacterium acnes SK137]
 gi|313765634|gb|EFS36998.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL013PA1]
 gi|313808349|gb|EFS46816.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA2]
 gi|313810700|gb|EFS48414.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL083PA1]
 gi|313816578|gb|EFS54292.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL059PA1]
 gi|313821110|gb|EFS58824.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA1]
 gi|313824034|gb|EFS61748.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA2]
 gi|313827221|gb|EFS64935.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL063PA1]
 gi|313829657|gb|EFS67371.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL063PA2]
 gi|313831478|gb|EFS69192.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL007PA1]
 gi|313833473|gb|EFS71187.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL056PA1]
 gi|314916618|gb|EFS80449.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA4]
 gi|314918921|gb|EFS82752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA1]
 gi|314920932|gb|EFS84763.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL050PA3]
 gi|314926923|gb|EFS90754.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL036PA3]
 gi|314931427|gb|EFS95258.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL067PA1]
 gi|314956652|gb|EFT00904.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL027PA1]
 gi|314959530|gb|EFT03632.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA1]
 gi|314968868|gb|EFT12966.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL037PA1]
 gi|314974828|gb|EFT18923.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL053PA1]
 gi|314977845|gb|EFT21939.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL045PA1]
 gi|314979555|gb|EFT23649.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL072PA2]
 gi|314984745|gb|EFT28837.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA1]
 gi|314988398|gb|EFT32489.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA2]
 gi|314990295|gb|EFT34386.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL005PA3]
 gi|315083839|gb|EFT55815.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL027PA2]
 gi|315087248|gb|EFT59224.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL002PA3]
 gi|315089665|gb|EFT61641.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL072PA1]
 gi|315095615|gb|EFT67591.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL038PA1]
 gi|315100299|gb|EFT72275.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL059PA2]
 gi|315102419|gb|EFT74395.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL046PA1]
 gi|315107740|gb|EFT79716.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL030PA1]
 gi|327326672|gb|EGE68460.1| lipoprotein A family protein [Propionibacterium acnes HL096PA3]
 gi|327332934|gb|EGE74666.1| lipoprotein A family protein [Propionibacterium acnes HL096PA2]
 gi|327448639|gb|EGE95293.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL043PA1]
 gi|327449510|gb|EGE96164.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL013PA2]
 gi|327451136|gb|EGE97790.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL043PA2]
 gi|327455754|gb|EGF02409.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA3]
 gi|328757070|gb|EGF70686.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL025PA2]
 gi|328757265|gb|EGF70881.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL087PA1]
 gi|328757453|gb|EGF71069.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL020PA1]
 gi|328761985|gb|EGF75492.1| lipoprotein A family protein [Propionibacterium acnes HL099PA1]
 gi|332676558|gb|AEE73374.1| rare lipoprotein A (RlpA) family protein [Propionibacterium acnes
           266]
          Length = 343

 Score = 40.8 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|332976792|gb|EGK13622.1| type III effector HopAJ2 [Psychrobacter sp. 1501(2011)]
          Length = 441

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 86  QDILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           + I+ + G    WP    +PL    +S  V+ L++RL  +G    +KG+         +A
Sbjct: 363 RGIIGQPGIQKSWPRY-EKPL----TSSQVRNLQQRLTSAGY--DTKGVDGIMGTNTRNA 415

Query: 142 VKLFQMRHGLDPSGMVD 158
              +Q  +G  P G V 
Sbjct: 416 FARWQAANGQTPDGFVT 432


>gi|281200353|gb|EFA74573.1| hypothetical protein PPL_11541 [Polysphondylium pallidum PN500]
          Length = 724

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L+  G LD S   +  +    + A+K  Q  H L  +G  D ST++
Sbjct: 353 LLSIGSLDESADRN-LYTTQTQDAIKKLQSTHNLPDTGEADPSTIK 397


>gi|206597316|gb|ACI15752.1| FI01410p [Drosophila melanogaster]
          Length = 613

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 66  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 125

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 126 DRVGTGDSRSKRYALQGSRWR 146


>gi|83951618|ref|ZP_00960350.1| hypothetical protein ISM_13685 [Roseovarius nubinhibens ISM]
 gi|83836624|gb|EAP75921.1| hypothetical protein ISM_13685 [Roseovarius nubinhibens ISM]
          Length = 390

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G SS  ++ L+ +L   G       +     A   +AV+  Q + GL 
Sbjct: 320 GAPVFDAGNPDPGLSSAQMKELQAKLAQRGY--DVGKIDGILGAGTRAAVQDVQQKLGLP 377

Query: 153 PS 154
             
Sbjct: 378 AD 379


>gi|313793623|gb|EFS41654.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA1]
 gi|313802934|gb|EFS44145.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL110PA2]
 gi|313839433|gb|EFS77147.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL086PA1]
 gi|314964726|gb|EFT08826.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL082PA1]
 gi|315082422|gb|EFT54398.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL078PA1]
 gi|327455956|gb|EGF02611.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL092PA1]
          Length = 343

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|225685937|ref|YP_002733909.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
 gi|256261850|ref|ZP_05464382.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642042|gb|ACO01955.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
 gi|263091326|gb|EEZ15862.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410256|gb|ADZ67320.1| lytic murein transglycosylase [Brucella melitensis M28]
 gi|326553549|gb|ADZ88188.1| lytic murein transglycosylase [Brucella melitensis M5-90]
          Length = 412

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D    +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYD--GKIDGKIGATSRAALEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|254486853|ref|ZP_05100058.1| peptidoglycan binding domain protein [Roseobacter sp. GAI101]
 gi|214043722|gb|EEB84360.1| peptidoglycan binding domain protein [Roseobacter sp. GAI101]
          Length = 386

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D ++ GG  +    P   G +    + L++RL   G    + G           A+ 
Sbjct: 306 HLSDRIAGGGPIQAKFGPDRYGLTIDDRKALQQRLTARGF--DTDGTDGVIGPNSRKAIA 363

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            +Q   GL  +G    + L+ ++
Sbjct: 364 AYQQSVGLSATGDPSRALLDRLS 386


>gi|163746090|ref|ZP_02153449.1| Peptidoglycan-binding domain 1 [Oceanibulbus indolifex HEL-45]
 gi|161380835|gb|EDQ05245.1| Peptidoglycan-binding domain 1 [Oceanibulbus indolifex HEL-45]
          Length = 629

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS   + L+  L  +G  D    +  AF     +++  +Q  +G D +G++ +    A+ 
Sbjct: 204 SSEERKDLQVALQWAGFYD--AAIDGAFGRGTRASMGAWQAANGYDQTGVLTTRQRAALI 261

Query: 167 VPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
              +  +  L + ++R             + + +P A +E               G V  
Sbjct: 262 AQYNAVLDGLGLQMVRDD--------KAGIEIMMPTAEVEFARYEPPFAHYDAS-GNVGA 312

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
           +  ++    NR      + I   +   +++    + P+    ++  +I E G  +   +V
Sbjct: 313 RVLLISQPGNRDTLYGLYDI---MQTLEIVP--LEGPRERARDSFELIGENGSIISQTQV 367

Query: 287 DWNSPEPPNFIFRQDPGKI 305
                +   F      G  
Sbjct: 368 SLEDGQIKGFTLIWPAGDE 386


>gi|17988368|ref|NP_541001.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 1 str. 16M]
 gi|256042995|ref|ZP_05445941.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112021|ref|ZP_05452966.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 3 str. Ether]
 gi|260564228|ref|ZP_05834713.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|265989432|ref|ZP_06101989.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265993467|ref|ZP_06106024.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|17984146|gb|AAL53265.1| membrane-bound lytic murein transglycosylase b [Brucella melitensis
           bv. 1 str. 16M]
 gi|260151871|gb|EEW86964.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|262764337|gb|EEZ10369.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000101|gb|EEZ12791.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 412

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D    +     A   +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYD--GKIDGKIGATSRAALEAFQQRNGLEPDGHPSKEVLSVLRR 411


>gi|332706111|ref|ZP_08426182.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
 gi|332355089|gb|EGJ34558.1| peptidoglycan binding domain protein [Lyngbya majuscula 3L]
          Length = 47

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 127 SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  +   F +    AV+ FQ+  GL  +G+V   T  A++
Sbjct: 1   TGKIDGIFASLTLEAVQRFQLDRGLLGNGVVSEHTWNALS 40


>gi|269468191|gb|EEZ79887.1| membrane-bound lytic murein transglycosylase B [uncultured SUP05
           cluster bacterium]
          Length = 149

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 3/75 (4%)

Query: 93  GWPELPIRPLH-LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G P+L   P+     S   +  ++  L   G    +            +A + +Q  + L
Sbjct: 77  GTPQLFATPIKEPSLSRDDITHIQTMLNQLGF--DTGEPDGISGPKTRNATRDYQRANNL 134

Query: 152 DPSGMVDSSTLEAMN 166
              G V     + + 
Sbjct: 135 PIDGYVGYQLFQQLQ 149


>gi|229551060|ref|ZP_04439785.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538230|ref|YP_003172729.1| YkuG protein [Lactobacillus rhamnosus Lc 705]
 gi|229315655|gb|EEN81628.1| peptidoglycan binding domain protein [Lactobacillus rhamnosus
           LMS2-1]
 gi|257149906|emb|CAR88878.1| YkuG protein [Lactobacillus rhamnosus Lc 705]
          Length = 775

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 9/101 (8%)

Query: 73  ETIAQTEKAIAFYQDILSRG-GWPELP-------IRPLHLGNSSVSVQRLRERLIISGDL 124
            TI    +A+     I S G G+           +  L  G      Q ++      G +
Sbjct: 35  ATIYALREALQHELGISSIGEGFGTATRTALSGVVDQLKPGYKGNIAQLIQGAFWCKG-I 93

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +P   L+  F A  E A K  Q   GL   G V  + + A+
Sbjct: 94  NPGTELNQNFSAETEQAFKSLQQDAGLTADGTVTVNLMAAL 134


>gi|91974696|ref|YP_567355.1| peptidoglycan binding domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gi|91681152|gb|ABE37454.1| Peptidoglycan-binding domain 1 [Rhodopseudomonas palustris BisB5]
          Length = 454

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P    + +  G      + ++  L  +GD   +  ++      + +A+K FQ  HG  P+
Sbjct: 47  PAETAKSMAQGER----EAIQSDLAWTGDY--NGVINGEASDRMVAAIKAFQNNHGAKPT 100

Query: 155 GMVDSSTLEAMNVPVDLRIRQLQVN 179
           G+++      +        R+LQ N
Sbjct: 101 GVLNPQERAQL----AEAARKLQGN 121


>gi|294625350|ref|ZP_06703986.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292600368|gb|EFF44469.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +  WP+    PL   NS+  +  L++RL   G      G+     A     ++ FQ    
Sbjct: 354 QQPWPK-DDPPL---NSTAQITELQQRLTDKGF--DVGGIDGVLGARTRQGIRAFQRSQQ 407

Query: 151 LDPSGMVDSSTLEAMNV 167
           L   G   +S L  +  
Sbjct: 408 LPQDGYASTSLLARLRA 424


>gi|86137700|ref|ZP_01056276.1| hypothetical protein MED193_07558 [Roseobacter sp. MED193]
 gi|85825292|gb|EAQ45491.1| hypothetical protein MED193_07558 [Roseobacter sp. MED193]
          Length = 529

 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 7/100 (7%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDS--STLE 163
           +   V  LR+ L  +G      G S   DA +  A+  FQ + G      +VD    T +
Sbjct: 25  TGKDVSLLRDMLAANG--IGPLGQSAKIDAGLIKAINHFQKKVGFKVTDSVVDPGGRTFK 82

Query: 164 AMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           A+       ++ L+        L + K   + +L N    
Sbjct: 83  ALLPKYQKALKALEKASREP--LYQMKFKGKTILCNKADY 120


>gi|45383954|ref|NP_990528.1| matrix metalloproteinase-16 [Gallus gallus]
 gi|1519365|gb|AAB07491.1| membrane type-matrix metalloproteinase [Gallus gallus]
          Length = 608

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|182680540|ref|YP_001834686.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182636423|gb|ACB97197.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 419

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 1/64 (1%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + ++  L+  G  D               A+  FQ RHGL P+G   +S L 
Sbjct: 357 PGLSRAERREVQALLMRQGY-DLDGKADGVIGTKSRQAISDFQQRHGLAPNGRASASVLA 415

Query: 164 AMNV 167
           A+  
Sbjct: 416 ALRR 419


>gi|125974431|ref|YP_001038341.1| carboxyl-terminal protease [Clostridium thermocellum ATCC 27405]
 gi|256005216|ref|ZP_05430184.1| carboxyl-terminal protease [Clostridium thermocellum DSM 2360]
 gi|281418956|ref|ZP_06249974.1| carboxyl-terminal protease [Clostridium thermocellum JW20]
 gi|125714656|gb|ABN53148.1| carboxyl-terminal protease [Clostridium thermocellum ATCC 27405]
 gi|255990870|gb|EEU00984.1| carboxyl-terminal protease [Clostridium thermocellum DSM 2360]
 gi|281407413|gb|EFB37673.1| carboxyl-terminal protease [Clostridium thermocellum JW20]
 gi|316941567|gb|ADU75601.1| carboxyl-terminal protease [Clostridium thermocellum DSM 1313]
          Length = 505

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V    + L   G            D     AV  FQ   GL   G++D +T +A+
Sbjct: 422 AQSEDVLNAEKILSALGY--DVDTPDNLMDEKTVKAVAEFQRDCGLYSYGVLDFATQQAL 479

Query: 166 N 166
           N
Sbjct: 480 N 480


>gi|298490028|ref|YP_003720205.1| peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
 gi|298231946|gb|ADI63082.1| Peptidoglycan-binding domain 1 protein ['Nostoc azollae' 0708]
          Length = 225

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 24/86 (27%), Gaps = 5/86 (5%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           R  L   G            D  ++ A+  FQ  + L   G     T           ++
Sbjct: 42  RAVLHGLGY-SVKVTNDALTDEEIKKAISEFQKGYKLTVDGKAGQKTQAF----AANIVK 96

Query: 175 QLQVNLMRIKKLLEQKMGLRYVLVNI 200
            LQ NL    K        ++    +
Sbjct: 97  ILQGNLNAALKPNPPLPRDQFYSPRM 122



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V+ L+  L  +   +P       +   +E  VK +Q ++ L  +G+ D    + ++    
Sbjct: 95  VKILQGNLNAALKPNPPLPRDQFYSPRMEKLVKEYQKKNQLTETGIADLVLRQKLDENAK 154

Query: 171 LRIRQ 175
             I Q
Sbjct: 155 KAIGQ 159


>gi|188580147|ref|YP_001923592.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium populi BJ001]
 gi|179343645|gb|ACB79057.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium populi BJ001]
          Length = 250

 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 21/116 (18%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELP---------------IRPLHLGNS 107
           +   IP      +A ++ A A  +D      W  L                 R L +G +
Sbjct: 128 VRRAIPA--PRVLAHSDVAPARKEDPGENFPWERLAQEGVGHWVPPAPVRDGRFLAMGET 185

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTL 162
              V+ L+  L + G    ++ ++  FDA   + V  FQ         G+ DSST+
Sbjct: 186 GQPVEALQAMLALYGY---AQPVTGQFDAATGAVVTAFQRHFRPARIDGVADSSTI 238


>gi|329945494|ref|ZP_08293234.1| peptidoglycan binding domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328528849|gb|EGF55791.1| peptidoglycan binding domain protein [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 373

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           ++   V +L   L   G  D        F     SA+  +Q   GL  +G +
Sbjct: 130 DNGEDVHQLETLLRDMGYFDYEP--DNHFSWATTSAIMKWQKAVGLPQTGTI 179


>gi|21243951|ref|NP_643533.1| transglycosylase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21109562|gb|AAM38069.1| transglycosylase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNV 167
            +  
Sbjct: 421 RLRA 424


>gi|78047996|ref|YP_364171.1| lytic murein transglycosylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|38564795|gb|AAR23828.1| putative murein transglycosylase precursor [Xanthomonas
           euvesicatoria]
 gi|78036426|emb|CAJ24117.1| Lytic murein transglycosylase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNV 167
            +  
Sbjct: 421 RLRA 424


>gi|313771652|gb|EFS37618.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL074PA1]
 gi|313818038|gb|EFS55752.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL046PA2]
          Length = 329

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 128 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 184


>gi|303248615|ref|ZP_07334870.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
 gi|302489965|gb|EFL49889.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio
           fructosovorans JJ]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 14/132 (10%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V   + RL   G       +    D   + A+K +Q   GL P+     S LE +     
Sbjct: 93  VADTQNRLSALGWYP--GPVDGRLDRMTKWAIKSYQTAVGLPPNPAASESLLEELARNPV 150

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP----AASLEAVENGKVGLRSTVIVGRVDR 226
                +           +      + +V  P     A      N +   R     G  + 
Sbjct: 151 RAPENIA--------YPDFSAREVHDIVLTPQRLGEAREFYARNREALSRVRQRYGVPEE 202

Query: 227 QTPILHSRINRI 238
               L +   R+
Sbjct: 203 YLVALLAVETRV 214


>gi|166364350|ref|YP_001656623.1| hypothetical protein MAE_16090 [Microcystis aeruginosa NIES-843]
 gi|166086723|dbj|BAG01431.1| hypothetical protein MAE_16090 [Microcystis aeruginosa NIES-843]
          Length = 616

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 3/66 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S S++  ++ +   G       +   +    E   + FQ +  L+  G++   T  A 
Sbjct: 183 MESESIRLWQKCMKERGY---PIEVDGEYGPNSERICREFQAKMKLEVDGVIGRDTWNAS 239

Query: 166 NVPVDL 171
                 
Sbjct: 240 WRQPKQ 245


>gi|221468755|ref|NP_726473.2| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
 gi|21392160|gb|AAM48434.1| RE62222p [Drosophila melanogaster]
 gi|60677889|gb|AAX33451.1| RE19818p [Drosophila melanogaster]
 gi|220902386|gb|AAF47255.3| matrix metalloproteinase 1, isoform C [Drosophila melanogaster]
          Length = 584

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|56698311|ref|YP_168684.1| peptidoglycan binding domain-containing protein [Ruegeria pomeroyi
           DSS-3]
 gi|56680048|gb|AAV96714.1| peptidoglycan binding domain protein [Ruegeria pomeroyi DSS-3]
          Length = 423

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP    R L L      +  L+ERL  +G    ++ +         +AV+ +Q+  G
Sbjct: 352 RGNWPR-ADRALTL---DERI-ELQERLTAAGF--NTQKIDGKIGPLTINAVRDYQLDQG 404

Query: 151 LDPSGMVDSSTLEAMN 166
           L P G      LE + 
Sbjct: 405 LAPDGYASLRVLERLR 420


>gi|81157905|dbj|BAE48203.1| matrix metalloproteinase 9 [Paralichthys olivaceus]
          Length = 267

 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 88  ILSRGGWPELPIRPLH---LGNSSVSVQR--LRE-RLIISGDLDPSKGLSVAFDAYVESA 141
           ++ + GW  LP+R +     G+   +V    L E  L   G LD               A
Sbjct: 21  VIVQDGW-SLPLRSISVTFPGDILKNVTDTDLAETYLKRFGYLDKMHRSGFQSMVSTAKA 79

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +K+ Q + GL  +G +D STLEAM  P      +   Q     +K   +        L  
Sbjct: 80  LKMMQRQMGLKETGRLDKSTLEAMKQPRCGVPDVANYQTFEGDLKW--DHNDVTYRTLNY 137

Query: 200 IPAASLEAVEN 210
            P      +++
Sbjct: 138 SPDMESSLIDD 148


>gi|311270531|ref|XP_001925199.2| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-17 [Sus
           scrofa]
          Length = 592

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 21/114 (18%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P    +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 51  LSRFGYLPPPDPATGQLQTQEELAKAIAAMQRFGGLEATGVLDEATLALMKTPRCSLPDL 110

Query: 169 -----VDLRIRQLQVNL-------MRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
                   R + L            R++         R  +  +   +L+   +
Sbjct: 111 PASASARRRRQALAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMHYALKVWSD 164


>gi|218530973|ref|YP_002421789.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523276|gb|ACK83861.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 214

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 12/71 (16%)

Query: 308 MASTKIEFYSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLK 358
            +         +  +       +H T        + R  + GCVR+  RN   L   + +
Sbjct: 77  FSREWDNAPMPHAIFFTQVGHAIHGTTYTR---RLGRAASHGCVRLSQRNAATLFTLVKQ 133

Query: 359 DTPTWSRYHIE 369
                +R  IE
Sbjct: 134 QKMANTRVVIE 144


>gi|85858976|ref|YP_461179.1| erfK/ybiS/ycfS/ynhG family protein [Syntrophus aciditrophicus SB]
 gi|85722067|gb|ABC77010.1| erfK/ybiS/ycfS/ynhG family protein [Syntrophus aciditrophicus SB]
          Length = 218

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 42/137 (30%), Gaps = 17/137 (12%)

Query: 232 HSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSP 291
            +  N+++    + +  +++  D+  L +          I               +    
Sbjct: 87  KTAGNKLLPRREYKVGTAVLGLDVYPLGKGQVTA-----IDFYPSWYPT--PYSREVFRK 139

Query: 292 EPPNFIFRQDPG-KINAMASTKIEFYS---RNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
                     PG  +N M + KI       +   Y +H    P     V R  T GC  +
Sbjct: 140 RGIELPPAVPPGHPLNYMGAAKISLSHRTRKGAIYRIHGNNNP---GRVGRRVTGGCFVM 196

Query: 347 RN--IIDLDVWLLKDTP 361
            N  +++L   +   T 
Sbjct: 197 YNDDVLELARTISVGTE 213


>gi|315109341|gb|EFT81317.1| lipoprotein A-like double-psi beta-barrel [Propionibacterium acnes
           HL030PA2]
          Length = 328

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 127 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 183


>gi|330468304|ref|YP_004406047.1| hypothetical protein VAB18032_21735 [Verrucosispora maris
           AB-18-032]
 gi|328811275|gb|AEB45447.1| hypothetical protein VAB18032_21735 [Verrucosispora maris
           AB-18-032]
          Length = 928

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 46/155 (29%), Gaps = 34/155 (21%)

Query: 92  GGWPELP-------IRPLHLGNSSVS--------------VQRLRERLIISGDLDPSKGL 130
           G WP  P         PL LG+S                 V+ L++ L   G       +
Sbjct: 365 GSWPVAPRALDTYGAHPLRLGDSDADGRYGGIAHGEPGTHVRLLQQHLTQLGFPTSPDPV 424

Query: 131 SVAFDAYVESAVKLFQ------MRHGLDPS---GMVDSSTLEAMNVPVDLRIRQLQVNLM 181
              F     SA++ FQ        H L        VD + L A+          L  +  
Sbjct: 425 GS-FGPRTASALREFQISARFARVHKLRLDEAGNPVDPAVLPAVRRYHGRINGCLNPDTA 483

Query: 182 RI--KKLLEQKMG-LRYVLVNIPAASLEAVENGKV 213
            +    L     G        + A  ++A   G+V
Sbjct: 484 TLLKTWLTPDAKGLQTRNAATVDAYRMQADVPGEV 518


>gi|320544348|ref|NP_001189002.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
 gi|318068688|gb|ADV37248.1| matrix metalloproteinase 1, isoform H [Drosophila melanogaster]
          Length = 554

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|239834506|ref|ZP_04682834.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
 gi|239822569|gb|EEQ94138.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
          Length = 441

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     +   +A++ FQ R+GL P G      L  +  
Sbjct: 388 ELQTHLKALGYYDGN--IDGKIGSTSRAAIEAFQQRNGLQPDGHPSKEVLSVLRR 440


>gi|195489771|ref|XP_002092878.1| GE11424 [Drosophila yakuba]
 gi|194178979|gb|EDW92590.1| GE11424 [Drosophila yakuba]
          Length = 586

 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|194886655|ref|XP_001976657.1| GG19900 [Drosophila erecta]
 gi|190659844|gb|EDV57057.1| GG19900 [Drosophila erecta]
          Length = 584

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQQTWVSAIEEFQNFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|163732767|ref|ZP_02140212.1| peptidoglycan binding domain protein [Roseobacter litoralis Och
           149]
 gi|161394127|gb|EDQ18451.1| peptidoglycan binding domain protein [Roseobacter litoralis Och
           149]
          Length = 376

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
               +  L+ RL   G    ++G         ++A++ +Q   GL  +G+     L 
Sbjct: 321 KDDRI-ALQTRLTARGF--DTQGSDGVIGPNSQAAIRAYQASQGLPVTGVPSQQLLS 374


>gi|297263898|ref|XP_002798895.1| PREDICTED: matrix metalloproteinase-17-like [Macaca mulatta]
          Length = 845

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            L+E L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P  
Sbjct: 291 LLKEWLSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMRTPRC 350

Query: 171 LRIRQLQVNLMRIKKLLEQK 190
                  +   R ++     
Sbjct: 351 SLPDLPVLTQARRRRQAPAP 370


>gi|224046469|ref|XP_002199883.1| PREDICTED: matrix metalloproteinase 16 [Taeniopygia guttata]
          Length = 609

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|149374881|ref|ZP_01892654.1| hypothetical protein MDG893_07485 [Marinobacter algicola DG893]
 gi|149360770|gb|EDM49221.1| hypothetical protein MDG893_07485 [Marinobacter algicola DG893]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 6/88 (6%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDSSTLEAMNVPVDLRIRQL 176
           L  +G            D  + SA++ +Q  H GL  +G +D  TL A+ +        +
Sbjct: 39  LYGAGY--DIGKADGWMDDTLRSAIRKYQSGHEGLQATGDLDPQTLSALGIAAKD---AV 93

Query: 177 QVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
             N    ++      G+       P A 
Sbjct: 94  TGNSAPSREGAMADAGVSKQRFGSPDAE 121


>gi|114320482|ref|YP_742165.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226876|gb|ABI56675.1| ErfK/YbiS/YcfS/YnhG family protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 177

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLD 353
            Y+H  P+           + GC+R+RN   + 
Sbjct: 123 IYIHGCPDECPMGIP---LSHGCIRMRNTDVIA 152


>gi|103484506|dbj|BAE94745.1| membrane type-matrix metalloproteinase 16 [Gallus gallus]
          Length = 609

 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|308497310|ref|XP_003110842.1| CRE-ZMP-1 protein [Caenorhabditis remanei]
 gi|308242722|gb|EFO86674.1| CRE-ZMP-1 protein [Caenorhabditis remanei]
          Length = 322

 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L    G +      +  A+K  Q   GL+ +G +D  T   M  P
Sbjct: 27  LQKYGYLPR--GSNQVSSESLSEALKNMQRMAGLEETGELDERTKRMMERP 75


>gi|299131934|ref|ZP_07025129.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Afipia sp. 1NLS2]
 gi|298592071|gb|EFI52271.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Afipia sp. 1NLS2]
          Length = 257

 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDS 159
           LG +S  +  L+  L+  G        S  +D     AV  FQ     +   G+ D 
Sbjct: 184 LGTTSDEIMALQRALVRYGY---PVLPSGQYDGVTMDAVAAFQRHFRPERVDGIADQ 237


>gi|285808350|gb|ADC35879.1| hypothetical protein [uncultured bacterium 246]
          Length = 97

 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            ++  L   G           +DA   +A++ FQ  +G++ +G +DS +L  +N+   
Sbjct: 13  EIQSALAKEGYF--QGPADGVWDASSVAALQKFQQENGIEATGKIDSLSLIKLNLGPK 68


>gi|170744460|ref|YP_001773115.1| peptidoglycan binding domain-containing protein [Methylobacterium
           sp. 4-46]
 gi|168198734|gb|ACA20681.1| Peptidoglycan-binding domain 1 protein [Methylobacterium sp. 4-46]
          Length = 513

 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 114 LRER------LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           LR R      LI +G    +   +         A+K FQ ++G+ P G+++ ST + +  
Sbjct: 39  LRSRVIAQVLLIATGH--QTSVPTENLGLRTFEAIKRFQEQNGIWPDGVLNKSTHDRLFA 96

Query: 168 PVDL 171
               
Sbjct: 97  TAAP 100


>gi|148241564|ref|YP_001226721.1| hypothetical protein SynRCC307_0465 [Synechococcus sp. RCC307]
 gi|147849874|emb|CAK27368.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 126

 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 39/175 (22%), Gaps = 59/175 (33%)

Query: 196 VLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
           ++V++    L A    ++     V  G+    TP   S++                    
Sbjct: 9   IVVDLSDQKLYAYNGPQLVRTIPVSSGKASTPTPTFSSKVQSK----------------- 51

Query: 256 MALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEF 315
                         +  +       V    V W    P                      
Sbjct: 52  --------------HRSVTMRGRGYVAPG-VPWAMCVPGGM------------------- 77

Query: 316 YSRNNTYMHDTPEPILFNNVVR-FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
                  MH  P             + GCVR+        WL   T T +   I+
Sbjct: 78  -----ICMHGAPWQEAAGQPYGVPRSHGCVRM--PTVQAKWLFHRTKTGTPITIQ 125


>gi|327458105|gb|EGF04760.1| bacterial SH3 domain protein [Propionibacterium acnes HL083PA2]
          Length = 289

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G+ +   + ++  L         K + + +     +AVK+FQ  + L  +G+ D+ TL
Sbjct: 142 GDHNARSKAVQRDLSTLNYFPA-KWVGLPYGPITTNAVKVFQRANALKQTGVTDAVTL 198


>gi|326917841|ref|XP_003205203.1| PREDICTED: matrix metalloproteinase-16-like [Meleagris gallopavo]
          Length = 609

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P     D 
Sbjct: 47  LQKYGYLPPTDPRMSVLRSAETMQSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 106

Query: 172 RIRQLQVNLMRIK 184
                + N+ R +
Sbjct: 107 TRGSSKFNIRRKR 119


>gi|7341370|gb|AAF61270.1|AF244994_1 membrane type-3 matrix metalloproteinase [Scyliorhinus torazame]
          Length = 613

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L  S+           + SAV   Q  +G+  +G +D +T++ M  P     D 
Sbjct: 51  LQKYGYLQASEPRMSVLRSSQSMHSAVAAMQQFYGIKVTGTLDENTIDWMKKPRCGVPDQ 110

Query: 172 RIRQLQVNLMRIKK-LLEQKMGLRYVLVNIPAAS 204
               ++ ++ R +  L  QK   +++  +I   +
Sbjct: 111 FGSSIRFSVRRKRYALTGQKWHHKHITYSIKNFT 144


>gi|93005492|ref|YP_579929.1| lytic murein transglycosylase [Psychrobacter cryohalolentis K5]
 gi|92393170|gb|ABE74445.1| Lytic murein transglycosylase [Psychrobacter cryohalolentis K5]
          Length = 433

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 11/79 (13%)

Query: 86  QDILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           + ++ +GG    WP    RPL    S+  V+ L++RL  SG    +KG          +A
Sbjct: 354 KALIGQGGLQKSWPRY-ERPL----STSQVRNLQQRLTSSGY--DTKGSDGIVGTNTRNA 406

Query: 142 VKLFQMRHGLDPSGMVDSS 160
            + +Q  +G  P G +   
Sbjct: 407 FQRWQAANGQTPDGFITQR 425


>gi|294664919|ref|ZP_06730235.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292605319|gb|EFF48654.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 425

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 363 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGARTRQGIRAFQRSQQLPQDGYASTSLLA 420

Query: 164 AMNV 167
            +  
Sbjct: 421 RLRA 424


>gi|170063963|ref|XP_001867331.1| vitronectin [Culex quinquefasciatus]
 gi|167881406|gb|EDS44789.1| vitronectin [Culex quinquefasciatus]
          Length = 488

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESA--------VKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G            DA +  +        ++ FQ  +GL+ +G++D  T  A+  P
Sbjct: 67  LVGLGYNKEDAKSGSVVDARLSDSDVRSLTELIRKFQEDNGLEVNGVLDDETKLAIGSP 125


>gi|47220689|emb|CAG11758.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 439

 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 115 RERLIISGDLDPSKGL-SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  LI  G L  +       +   V  A+++FQ  + L P+G  D +T++ M  P
Sbjct: 3   QAYLIKYGYLKDAADQEDPQYLEEVIEALRVFQKANDLLPTGEPDEATIQVMRQP 57


>gi|307941473|ref|ZP_07656828.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
 gi|307775081|gb|EFO34287.1| peptidoglycan-binding domain 1 protein [Roseibium sp. TrichSKD4]
          Length = 1408

 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 115  RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            + +L   G    +            SAV+ FQ   GL  +G +D++ ++ +N
Sbjct: 1355 QTKLNALGF--NAGAPDGQTGPQTRSAVRAFQRSLGLPETGDIDAALIKELN 1404


>gi|227822672|ref|YP_002826644.1| lytic murein transglycosylase [Sinorhizobium fredii NGR234]
 gi|227341673|gb|ACP25891.1| lytic murein transglycosylase [Sinorhizobium fredii NGR234]
          Length = 405

 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 40/149 (26%), Gaps = 17/149 (11%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGID--SDIPIISKETIA 76
              +G++  +       L+  +                    + ++        +     
Sbjct: 272 WFALGVAPRDGNTSHGALEASLVLPQGRKGVAFLT--YPNFKIYLEWNQSFIYTTSAAYF 329

Query: 77  QTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA 136
            T  A           G P         G     ++ L+ +L   G       +     +
Sbjct: 330 ATRLA-----------GAPPYQAGNPEPGLGDTEMKTLQTKLQALGH--DVGKIDGILGS 376

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              +A++  Q++ GL   G      L+A+
Sbjct: 377 GTRTALQKEQLKLGLPADGWATPDLLQAL 405


>gi|117921513|ref|YP_870705.1| peptidoglycan binding domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613845|gb|ABK49299.1| Peptidoglycan-binding domain 1 protein [Shewanella sp. ANA-3]
          Length = 562

 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           FD  +E+ +K FQ +HGL   G+  + TL
Sbjct: 513 FDLKLENDLKAFQSQHGLKADGIAGNQTL 541


>gi|312883788|ref|ZP_07743507.1| hypothetical protein VIBC2010_14344 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368537|gb|EFP96070.1| hypothetical protein VIBC2010_14344 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 489

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 22/174 (12%)

Query: 29  KPIHASVLDEIINESYHSIVN--DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQ 86
             +     D+ I E+ H   +  +   +         +S       E I   + ++   +
Sbjct: 128 GDLSKGTFDQGIIENAHEPSDRIETKTSPAPSPQQATESAKNDSEDELI--LKSSLKQSK 185

Query: 87  DI--LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
            +  L+ G +  L    +     +  ++++++ LI  G      G    F    E AVK 
Sbjct: 186 PLNELAAGKFNALKKGSIE----TEEIKKVQQALIDCGFNLGKFGADGDFGRATEGAVKQ 241

Query: 145 FQMRH-----------GLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLL 187
           FQ  +             +  G+VD +T+ A++  +    + +   +   K L 
Sbjct: 242 FQAHYKPTHTTHKSYQFGNVDGIVDKNTILALDEAIKEGWKFVDDEM-DQKWLT 294


>gi|213423298|ref|ZP_03356292.1| hypothetical protein Salmonentericaenterica_37912 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 38

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 10/35 (28%), Gaps = 1/35 (2%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNNTY-MHDTPE 328
           +       G  N M    I   +    Y +H T  
Sbjct: 1   DLPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNA 35


>gi|150018201|ref|YP_001310455.1| peptidoglycan binding domain-containing protein [Clostridium
           beijerinckii NCIMB 8052]
 gi|149904666|gb|ABR35499.1| Peptidoglycan-binding domain 1 protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +Q ++++L   G +    G++        + V  FQ  +GL   GMV SSTL A+
Sbjct: 67  DIQLIQQQLNSKGYVLTVDGIAGI---NTYNTVVKFQRENGLVADGMVGSSTLAAL 119


>gi|148255717|ref|YP_001240302.1| hypothetical protein BBta_4352 [Bradyrhizobium sp. BTAi1]
 gi|146407890|gb|ABQ36396.1| hypothetical protein BBta_4352 [Bradyrhizobium sp. BTAi1]
          Length = 486

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 3/68 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++ RL   G       ++  FD    + +K +Q   G   +G +     +A+        
Sbjct: 365 IQRRLTGLGF---DTKMTGVFDDETRAVMKRWQAARGYPATGFMTKLQHKALLAEPQPAP 421

Query: 174 RQLQVNLM 181
               V   
Sbjct: 422 ATAAVGDE 429


>gi|330830587|ref|YP_004393539.1| general secretion pathway protein A [Aeromonas veronii B565]
 gi|328805723|gb|AEB50922.1| General secretion pathway protein A [Aeromonas veronii B565]
          Length = 522

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSST---LEAMNVPVDLRIR 174
            FD  +++ ++ FQ   GL P G+  S+T   L A++     R+ 
Sbjct: 475 RFDGELKNKLQQFQRDQGLTPDGIAGSNTLLRLNALSGEPMPRLE 519


>gi|197105795|ref|YP_002131172.1| N-acetylmuramoyl-L-alanine amidase [Phenylobacterium zucineum HLK1]
 gi|196479215|gb|ACG78743.1| N-acetylmuramoyl-L-alanine amidase [Phenylobacterium zucineum HLK1]
          Length = 248

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 89  LSRGGWPELPIRP---LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              G W E    P   +  G    +V  L+  L   G        S  FDA   + V  F
Sbjct: 163 AGHGLWAEAAPAPGAPIGEGEEGAAVFALQAGLTRLGY---DLPPSGRFDADTTTVVSAF 219

Query: 146 QMRHGLD-PSGMVDSSTLEAMNV 167
           Q     +   G+ D  T   +  
Sbjct: 220 QRHWRPERIDGIADGETRARLIA 242


>gi|30688744|ref|NP_173824.2| matrixin family protein [Arabidopsis thaliana]
 gi|53749140|gb|AAU90055.1| At1g24140 [Arabidopsis thaliana]
 gi|332192361|gb|AEE30482.1| matrix metalloprotease domain-containing protein [Arabidopsis
           thaliana]
          Length = 384

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     +  L++     G +     S   +  FD  +++AV+++Q    L+ +G++D  T
Sbjct: 55  GKKYDGLYMLKQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELT 114

Query: 162 LEAMNVP 168
           L+ + +P
Sbjct: 115 LKHVVIP 121


>gi|11228711|gb|AAG33131.1|AF271666_1 matrix metalloproteinase 1 [Drosophila melanogaster]
          Length = 567

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 63  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 122

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 123 DRVGTGDSRSKRYALQGSRWR 143


>gi|254504281|ref|ZP_05116432.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222440352|gb|EEE47031.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 210

 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMV 157
            RP+        V+  +E L   G       +        ++AV  +Q +H  L   G++
Sbjct: 74  ARPVPPSAPDPVVREAQEALTRFGF--DPGVIDGWMGHRTKAAVLAYQRQHPDLVNDGII 131

Query: 158 DSSTLEAMNVPV 169
             +TL  +    
Sbjct: 132 GPATLVQLRKDA 143


>gi|126737123|ref|ZP_01752858.1| hypothetical protein RSK20926_11849 [Roseobacter sp. SK209-2-6]
 gi|126721708|gb|EBA18411.1| hypothetical protein RSK20926_11849 [Roseobacter sp. SK209-2-6]
          Length = 243

 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 44/164 (26%), Gaps = 15/164 (9%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V+ L+  L   G       +          A+  F++  GL P   V   TL   
Sbjct: 3   QHSYDVRWLQRALQQLGHYK--GRVDGISGPMTRKAIVAFKLSQGLWPRDYVGPITLG-- 58

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                 R+R         K   +      +++       L  V + +V        G   
Sbjct: 59  ------RLRDAVEVSEPRKFGPDTAPEPPWLVELGKVMGLHEVRDNRVLSDWLRSDGSTL 112

Query: 226 RQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
                L    +  +      +P     ++ +    +   Y   N
Sbjct: 113 GDPAKLPWCGDAAITALELTLP-----EEPLPKNLEANPYWARN 151


>gi|194302980|ref|YP_002014249.1| gp33 [Mycobacterium phage Boomer]
 gi|194153028|gb|ACF34095.1| gp33 [Mycobacterium phage Boomer]
          Length = 333

 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 73/253 (28%), Gaps = 50/253 (19%)

Query: 102 LHLGNSSVSVQRLRERLII-----SGDLDPSKGLSVAFDAYVESAVKLFQMRH------- 149
           L LG+SS  +++++  +       +GDL      +  +D  + +AV   Q R+       
Sbjct: 10  LGLGDSSDEIRKIKAFMRRKFASYAGDL----ADTPLYDEAMTAAVAEMQARYSAAGQLR 65

Query: 150 -GLDPSGMVDSSTLEAMNVPVDL----RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
            GL   G+V + T   M          R   + V    +   +                +
Sbjct: 66  AGLYIPGIVGAETKYVMGYLPRPVVDTRPVLITVCGTGVPWWIGPDAD-----------T 114

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQ 264
             AVE+  +       +G      P+  S I   +   +    R   ++ +         
Sbjct: 115 ARAVEDKYLW----QPIGYPAAPFPMGKS-ITAAITEAHNQANR--WRERIETHGAALAG 167

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK-------IEFYS 317
           Y     + + +     +  E    +  +P              +           +   +
Sbjct: 168 Y-SQGAVVVSELWMNHIAPETGSLHWMKPHIEKAVTWGNPNRELGHVWADHGGSPMAPSN 226

Query: 318 RNNT---YMHDTP 327
                   M DTP
Sbjct: 227 TQGVSSNGMRDTP 239


>gi|171915574|ref|ZP_02931044.1| hypothetical protein VspiD_30425 [Verrucomicrobium spinosum DSM
           4136]
          Length = 200

 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 58/192 (30%), Gaps = 37/192 (19%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           + ++ L  +  PV    +QL V         +   G  Y++V++     E    G V   
Sbjct: 26  LGANYLAGLGGPVPTAPQQLGVAEPVSYWDDDGSQGESYIVVDLRRQVAEFYRAGHVIGV 85

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
           + +  G   R TP    +I                       L +D  ++  +  H+ D 
Sbjct: 86  AAISSGTEMRATPSGDYKI-----------------------LEKDIDHVSSSYGHVEDS 122

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVV 336
            G  V  +    +   P        P  +N      +     +   MH    P       
Sbjct: 123 AGNAVNNDATPRSPVPPGCKYV---PAPMN----FFMRLTW-DGVGMHQGYLPGY----- 169

Query: 337 RFETSGCVRVRN 348
              + GC+R+  
Sbjct: 170 -PASHGCIRMDR 180


>gi|326669661|ref|XP_002662954.2| PREDICTED: matrix metalloproteinase-15-like [Danio rerio]
          Length = 655

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L  +        +   + +A+   Q  +GL+ +G +D  T+EAM  P     D 
Sbjct: 43  LRMYGYLPQASRQMSTMRSAQILSNAISDMQRFYGLEITGEMDPGTIEAMKRPRCGVPDK 102

Query: 172 RIRQLQVNLMRIK 184
              Q++ N+ R +
Sbjct: 103 FGAQIKTNVRRKR 115


>gi|294101487|ref|YP_003553345.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM
           12261]
 gi|293616467|gb|ADE56621.1| ErfK/YbiS/YcfS/YnhG family protein [Aminobacterium colombiense DSM
           12261]
          Length = 167

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 42/166 (25%), Gaps = 61/166 (36%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--------DRQTPILHSRINRIMFNPY 243
               ++V      L     GK  L   V VGR         D +TP+    + RI  + +
Sbjct: 34  PPDRIVVEKRKFVLTLYREGKEVLSFPVAVGRNKGNKQRVGDLRTPVGTFMVERIHDSSH 93

Query: 244 WVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
           WV                                           +  +           
Sbjct: 94  WV-------------------------------------------HDFKDGKGPI----- 105

Query: 304 KINAMASTKIEFYSRN-NTYMHDTPEPILFNNVVRFETSGCVRVRN 348
              A     I   +      +H T +P       R  T GCVR+RN
Sbjct: 106 -KGAYGPWFIRLKTGWSGIGIHGTHDPGSIGQ--RA-TEGCVRLRN 147


>gi|302536419|ref|ZP_07288761.1| secreted protein [Streptomyces sp. C]
 gi|302445314|gb|EFL17130.1| secreted protein [Streptomyces sp. C]
          Length = 235

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 141 AVKLFQMRHGLDPS-GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           A++ FQ  HG+ P+ G     T + M+  +  R      N           +G    +  
Sbjct: 69  AIQSFQATHGITPTMGYAGPLTWQTMSTMLAQRAAGKNPNAE---GKCPVNLGRIACVDL 125

Query: 200 IPAASLEAVENGKVGL--RSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
                L  +++G         V  G+ +  T     +I     N +  I
Sbjct: 126 T--RQLSWIQDGATLKYGPVPVRTGKAETPTRTGLKKIYYRSINHWSTI 172


>gi|254292987|ref|YP_003059010.1| peptidoglycan-binding protein [Hirschia baltica ATCC 49814]
 gi|254041518|gb|ACT58313.1| Peptidoglycan-binding domain 1 protein [Hirschia baltica ATCC
           49814]
          Length = 323

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 74  TIAQTEKAIAFYQDILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLS 131
           TI  T K I   +++   GG  W ++         S+  +  ++  L  +G    S    
Sbjct: 233 TIPATYKTIEK-REVTGGGGIEWRQVLCDT---NTSAAEIAEVQRALTNAGY---SVPAD 285

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
             F A   +A++ +Q  +GL   G +  ST+E++ + + 
Sbjct: 286 GVFGAATLTAMESYQRANGLPV-GYLTMSTVESLGLSIR 323


>gi|296130713|ref|YP_003637963.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
 gi|296022528|gb|ADG75764.1| Peptidoglycan-binding domain 1 protein [Cellulomonas flavigena DSM
           20109]
          Length = 137

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 5/109 (4%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQR 113
              A V     S    +   T  +   + A+ + +   G  P+  +     GN   +V  
Sbjct: 15  AAGALVATAPASTAAGLGSCTAYKQYSSGAYARFVPVNGSTPDCILGK---GNYGNAVWA 71

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           L++ L        +   S  F       +K FQ +  ++  G+    T 
Sbjct: 72  LQKALKTCEKYSLAVDKS--FGNETRDVLKKFQTKKKIEVDGIYGPETR 118


>gi|196230143|ref|ZP_03129006.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196225740|gb|EDY20247.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 206

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 47/181 (25%), Gaps = 38/181 (20%)

Query: 190 KMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRS 249
                +V+V++    +  +   +V + +    G+   +TP     +     +      RS
Sbjct: 64  NPDNSHVIVSLSKQRVYLMVGEQVYIDTPCSTGKRGHETPRGDFHVREKDPDH-----RS 118

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
            I  D +                +      ++       +                   +
Sbjct: 119 SIYGDFV----------DRGGRVVRSGVSTQIDSAPSGTHYVGA---------------S 153

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
                  +     MH    P          + GCVR+    D+   + +     +   IE
Sbjct: 154 MKWFCRLTDTGVGMHVGILPGY------AASHGCVRL--PSDIAPLIYQKVKVGTPAVIE 205

Query: 370 E 370
           E
Sbjct: 206 E 206


>gi|304320863|ref|YP_003854506.1| hypothetical protein PB2503_06492 [Parvularcula bermudensis
           HTCC2503]
 gi|303299765|gb|ADM09364.1| hypothetical protein PB2503_06492 [Parvularcula bermudensis
           HTCC2503]
          Length = 403

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 8/106 (7%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           +  +        I     AIA  +       WP    R L L       + L++ L   G
Sbjct: 306 MRYNNSTAYALGIGLLSDAIAG-RQSALSTQWPR-DDRSLSLTER----KSLQQTLKERG 359

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                  +     A  ++A++ +Q   GL   G   + TL  +++ 
Sbjct: 360 Y--DPGPVDGIIGAGTKAALRAWQRDQGLPADGYASARTLSVLSMN 403


>gi|301610029|ref|XP_002934557.1| PREDICTED: matrix metalloproteinase-19 [Xenopus (Silurana)
           tropicalis]
          Length = 440

 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 115 RERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  L   G L               V+ A+++FQ+   L  +G++D  T++ M  P
Sbjct: 67  KRYLQQFGYLQKPLESDTEDFSSEEVQEALRIFQLSTHLPGTGVLDEDTIDKMRQP 122


>gi|312383885|gb|EFR28782.1| hypothetical protein AND_02824 [Anopheles darlingi]
          Length = 491

 Score = 40.4 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 27/90 (30%), Gaps = 12/90 (13%)

Query: 307 AMASTKIEFYSRNNTYMH-DTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
            +     E    +  YMH    +P      +         V N + L  ++L+   TW+ 
Sbjct: 314 PLGEYWKELVYESG-YMHIQATKPDTIGAAL---------VGNPVGLAAYILEKFSTWTN 363

Query: 366 YHIEEVVKTRKTTPVKLATEV-PVHFVYIS 394
                +          L   +  V   Y++
Sbjct: 364 KAFRSLPDGGLERYFTLDALLDNVMIYYLT 393


>gi|284515810|gb|ADB91412.1| MIP15906p [Drosophila melanogaster]
          Length = 541

 Score = 40.4 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSKGL---SVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 66  LSQFGYLPASASNPASSGLHDQRTWVSAIEEFQNFAGLNITGELDAETMKLMSLPRCGVR 125

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 126 DRVGTGDSRSKRYALQGSRWR 146


>gi|90418104|ref|ZP_01226016.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337776|gb|EAS51427.1| conserved hypothetical protein, ErfK/YbiS/YcfS/YnhG family
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 142

 Score = 40.4 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 5/65 (7%)

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTPTWSR 365
           M+      +      +H T      + + R  + GCVR+   N       + K     +R
Sbjct: 81  MSPMPYSVFYHRGYAIHGT---GAVSRLGRPASHGCVRLHTANAKIFYTMVRKMGMGNTR 137

Query: 366 YHIEE 370
             ++ 
Sbjct: 138 VVVQR 142


>gi|49474017|ref|YP_032059.1| hypothetical protein BQ03770 [Bartonella quintana str. Toulouse]
 gi|49239520|emb|CAF25877.1| hypothetical protein BQ03770 [Bartonella quintana str. Toulouse]
          Length = 280

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 7/132 (5%)

Query: 34  SVLDEIINESYHSIVNDRFDNFLARVDMGIDSDI---PIISKETIAQTEKAIAFYQDILS 90
            + D  ++             +  +   GI + +   PI+ + T+      +    +I  
Sbjct: 143 GLYDGPLDGLEGPKTRRAIALWKQQTADGIQNSVLSKPIVDEITLLIERSEMEMENEITK 202

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
               P      L        + ++++ L I G  +    ++   D     A+K FQ   G
Sbjct: 203 TKDLPHSTETVLEPPVVD--IIKVQKALRIFG--NQEVIVTGVEDQKTIEALKQFQKMFG 258

Query: 151 LDPSGMVDSSTL 162
           L  +G ++ + L
Sbjct: 259 LPITGKINHAVL 270


>gi|255264719|ref|ZP_05344061.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62]
 gi|255107054|gb|EET49728.1| peptidoglycan-binding domain 1 [Thalassiobium sp. R2A62]
          Length = 559

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 16/36 (44%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
               +   FD     A++ +Q   GL  +G ++ +T
Sbjct: 511 EPGRVDGRFDGNTRRALRRYQQARGLPVTGYMNEAT 546


>gi|194219304|ref|XP_001498812.2| PREDICTED: similar to matrix metalloproteinase 25 preproprotein
           [Equus caballus]
          Length = 599

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P           A +  A+K+ Q   GL  +G++D  T+ AM  P
Sbjct: 73  LTRYGYLPPPNPAQAQLQSPAKLRDAIKVMQRFAGLRETGVLDPETMAAMRKP 125


>gi|192361979|ref|YP_001980771.1| peptidoglycan lytic transglycosylase [Cellvibrio japonicus Ueda107]
 gi|190688144|gb|ACE85822.1| peptidoglycan lytic transglycosylase, putative, plt103B [Cellvibrio
           japonicus Ueda107]
          Length = 434

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V +L+E L   G           F      A+  FQ + GL   G    + L  + V
Sbjct: 376 QVIQLQEALGQKGFYHEKA--DGIFGPATRRALSEFQHQQGLIADGFPSRTLLTMLGV 431


>gi|90424897|ref|YP_533267.1| hypothetical protein RPC_3408 [Rhodopseudomonas palustris BisB18]
 gi|90106911|gb|ABD88948.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB18]
          Length = 496

 Score = 40.4 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+    D    L   T
Sbjct: 115 NGIALHGGPLPGY------AASHGCVRM--PYDFAEKLFDKT 148


>gi|157821123|ref|NP_001099778.1| matrix metalloproteinase-21 [Rattus norvegicus]
 gi|149061331|gb|EDM11754.1| matrix metalloproteinase 21 (predicted) [Rattus norvegicus]
          Length = 568

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 45/143 (31%), Gaps = 34/143 (23%)

Query: 26  LVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFY 85
           L    +  ++L   +     +     F +             P+   + IA    A    
Sbjct: 2   LAVSDLRLTMLLCWLVTPQPAQPERLFHSRDRSDLEP----SPLSRAKPIADLHAA---- 53

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           Q+ L + GW E+          S  V          G               +  AV+ F
Sbjct: 54  QNFLLKYGWSEVSSPK-----ESAGVP--------VGF-------------TLAQAVRRF 87

Query: 146 QMRHGLDPSGMVDSSTLEAMNVP 168
           Q  + L  SG +DS TL AMN P
Sbjct: 88  QKANRLPASGKLDSPTLAAMNKP 110


>gi|195120101|ref|XP_002004567.1| GI19538 [Drosophila mojavensis]
 gi|193909635|gb|EDW08502.1| GI19538 [Drosophila mojavensis]
          Length = 588

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D +   SA++ FQ   GL+ +G +D  TL+ M++P     
Sbjct: 40  LSQFGYLPASARNPANSGLQDKHTWVSAIEEFQSFAGLNITGELDEETLKLMSLPRCGVR 99

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 100 DRVGTGDSRAKRYALQGSRWR 120


>gi|149756826|ref|XP_001493989.1| PREDICTED: matrix metallopeptidase 17 (membrane-inserted) [Equus
           caballus]
          Length = 579

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 31  LSRFGYLPPADPTTGQLQTQEELSKAIAAMQRFGGLEATGILDEATLALMKTPRCSLPDL 90

Query: 176 LQVNLMRIKKLLEQK 190
             V L R ++     
Sbjct: 91  PAVILSRRRRQAPAP 105


>gi|115467320|ref|NP_001057259.1| Os06g0239100 [Oryza sativa Japonica Group]
 gi|51535159|dbj|BAD37871.1| putative metalloproteinase [Oryza sativa Japonica Group]
 gi|51535823|dbj|BAD37908.1| putative metalloproteinase [Oryza sativa Japonica Group]
 gi|113595299|dbj|BAF19173.1| Os06g0239100 [Oryza sativa Japonica Group]
 gi|125596648|gb|EAZ36428.1| hypothetical protein OsJ_20758 [Oryza sativa Japonica Group]
          Length = 371

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L            +  FDA +E A+K++Q   GLD +G +D
Sbjct: 56  GDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQGNFGLDVTGDLD 115

Query: 159 SSTLEAMNVP 168
           ++T+  M  P
Sbjct: 116 AATVSQMMAP 125


>gi|186685823|ref|YP_001869019.1| PT repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468275|gb|ACC84076.1| PT repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 225

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 24/85 (28%), Gaps = 7/85 (8%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP-SGMVDSSTLEAMNVPVDL 171
           + R  L   G  +         D   + A++ FQ  + L P  G+    T          
Sbjct: 40  QFRSVLRGLGY-NVKVTNGPLTDEETKKAIREFQTGYKLKPVDGIAGPKT-----QDFAA 93

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYV 196
            I Q+    +         +   + 
Sbjct: 94  NIVQILHTNLNAVVKPNPPLPRDHF 118


>gi|110677589|ref|YP_680596.1| transglycosylase, putative [Roseobacter denitrificans OCh 114]
 gi|109453705|gb|ABG29910.1| transglycosylase, putative [Roseobacter denitrificans OCh 114]
          Length = 451

 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 2/55 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           + +++RL  +G    ++G+          A++ FQ   GL   G   S+ L+ + 
Sbjct: 399 KEIQQRLTHAGF--NTQGVDGRIGPKTTDAIRAFQRNRGLVADGYASSALLQKLR 451


>gi|331674824|ref|ZP_08375581.1| general secretory pathway component, cryptic [Escherichia coli
           TA280]
 gi|331067733|gb|EGI39131.1| general secretory pathway component, cryptic [Escherichia coli
           TA280]
          Length = 489

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +  ++   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPFLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|221468756|ref|NP_523852.3| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
 gi|320544344|ref|NP_001189000.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
 gi|320544346|ref|NP_001189001.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
 gi|220902387|gb|AAM68327.2| matrix metalloproteinase 1, isoform D [Drosophila melanogaster]
 gi|318068686|gb|ADV37246.1| matrix metalloproteinase 1, isoform F [Drosophila melanogaster]
 gi|318068687|gb|ADV37247.1| matrix metalloproteinase 1, isoform G [Drosophila melanogaster]
          Length = 541

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|239814037|ref|YP_002942947.1| lytic murein transglycosylase [Variovorax paradoxus S110]
 gi|239800614|gb|ACS17681.1| lytic murein transglycosylase [Variovorax paradoxus S110]
          Length = 438

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  L+  L   G    +              ++ +Q   GL   G   +  L+ +  P
Sbjct: 381 SQIAELQAALTRRGF--ATGAADGVMGPATREGLRRYQRSVGLPADGYPSAELLQRLQQP 438


>gi|241203749|ref|YP_002974845.1| peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857639|gb|ACS55306.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 317

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 44/152 (28%), Gaps = 13/152 (8%)

Query: 25  SLVEKPIHASVLDEIINESY-----HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           S+    I  +V+   +  +          +  F     +    + +  P   ++    T 
Sbjct: 59  SVAGGAITFAVIFSFVAANALWYQPGLHPHPIFRTRDPQSPTVLGARRPAEEQQG-DVTT 117

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             I   +D  +    P         G   S  V  ++++L+  G                
Sbjct: 118 FRIERPRDTATTNATPAPAA----PGQQPSQLVMDIQQQLVRRGLYS--GIPDGIIGPRT 171

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            +A+  F+   G+  +G      L A+     
Sbjct: 172 SAAILFFEETVGMTQTGDPTPEVLVALKTDAA 203



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V ++++ L        + G+         +A++ FQ  + L   G  + + L+ + 
Sbjct: 259 VLKIQKGLSNMAY--ANVGVDGVAGEQTRAAIRHFQKHYNLPEDGEPNQAVLKKLK 312


>gi|149579401|ref|XP_001519031.1| PREDICTED: similar to matrix metalloproteinase 28 [Ornithorhynchus
           anatinus]
          Length = 421

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 32/103 (31%), Gaps = 20/103 (19%)

Query: 118 LIISGDL---DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------ 168
           L   G L           +FD     AV+ FQ    L  SG++D++TL  M  P      
Sbjct: 61  LGRYGYLRERVGEAPSPESFDD----AVREFQWTARLPVSGVLDAATLRQMKRPRCGVDD 116

Query: 169 -------VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
                   +     L     R++K   Q  G        P   
Sbjct: 117 ADSREAWAERVTAPLAGRRARLRKRYVQPRGETPRAPADPGGE 159


>gi|56478199|ref|YP_159788.1| putative peptidoglycan-binding protein [Aromatoleum aromaticum
           EbN1]
 gi|56314242|emb|CAI08887.1| putative peptidoglycan-binding protein [Aromatoleum aromaticum
           EbN1]
          Length = 401

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 7/70 (10%)

Query: 108 SVSVQRLRER-----LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              + R+  R     L   G    +     A  A   +AV+ FQ   GL+P G      L
Sbjct: 334 DPGLSRVERREVQTLLSQLGY--DAGEADGALGARSRAAVQQFQRGQGLEPDGRAGRQVL 391

Query: 163 EAMNVPVDLR 172
           E +      R
Sbjct: 392 ELLRKAYAER 401


>gi|319426715|gb|ADV54789.1| lytic murein transglycosylase [Shewanella putrefaciens 200]
          Length = 442

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+E+L  +G                 + ++ FQ    
Sbjct: 366 NGGEPLKVAPPEQPRLSREQVKQLQEKLNEAGF--EVGKPDGVLGRNSMAGIQAFQRSKK 423

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 424 MIADGFPSPEVFAALGLT 441


>gi|31543257|ref|NP_035976.3| matrix metalloproteinase-17 precursor [Mus musculus]
 gi|30354087|gb|AAH51917.1| Matrix metallopeptidase 17 [Mus musculus]
 gi|148687566|gb|EDL19513.1| matrix metallopeptidase 17 [Mus musculus]
          Length = 578

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|21624137|dbj|BAA82708.2| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|120598509|ref|YP_963083.1| lytic murein transglycosylase [Shewanella sp. W3-18-1]
 gi|120558602|gb|ABM24529.1| lytic murein transglycosylase [Shewanella sp. W3-18-1]
          Length = 439

 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+E+L  +G                 + ++ FQ    
Sbjct: 363 NGGEPLKVAPPEQPRLSREQVKQLQEKLNEAGF--EVGKPDGVLGRNSMAGIQAFQRSKK 420

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 421 MIADGFPSPEVFAALGLT 438


>gi|261756759|ref|ZP_06000468.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|261736743|gb|EEY24739.1| conserved hypothetical protein [Brucella sp. F5/99]
          Length = 202

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L         +      A+  FQ   G+  +G+ DS TL  + +P
Sbjct: 143 LIKLGYLT-DSDADGEYGPLTRFALTKFQQAKGIQQTGLPDSVTLVRLFIP 192


>gi|261318770|ref|ZP_05957967.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|265986568|ref|ZP_06099125.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|261297993|gb|EEY01490.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|264658765|gb|EEZ29026.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
          Length = 202

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L         +      A+  FQ   G+  +G+ DS TL  + +P
Sbjct: 143 LIKLGYLT-DSDADGEYGPLTRFALTKFQQAKGIQQTGLPDSVTLVRLFIP 192


>gi|260574123|ref|ZP_05842128.1| lytic murein transglycosylase [Rhodobacter sp. SW2]
 gi|259023589|gb|EEW26880.1| lytic murein transglycosylase [Rhodobacter sp. SW2]
          Length = 417

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 7/65 (10%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +  WP    R L        +  L+  L  +G       +         + VK FQ  +G
Sbjct: 349 QAAWPR-EDRLLTP---DERL-ELQALLARAGFYA--DAVDGRIGPNTVAGVKAFQRANG 401

Query: 151 LDPSG 155
           L P G
Sbjct: 402 LVPDG 406


>gi|217977417|ref|YP_002361564.1| lytic murein transglycosylase [Methylocella silvestris BL2]
 gi|217502793|gb|ACK50202.1| lytic murein transglycosylase [Methylocella silvestris BL2]
          Length = 405

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 6/74 (8%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP         G S    + L+  L+  G  D             + A+  FQ + GL 
Sbjct: 336 PWPTND-----PGLSRADRRELQALLMRRGY-DLDGKADGVIGTKTKRAISDFQAKAGLA 389

Query: 153 PSGMVDSSTLEAMN 166
           P G    S L A  
Sbjct: 390 PDGRASVSVLAAAR 403


>gi|2829864|gb|AAC00572.1| similar to zinc metalloproteinases [Arabidopsis thaliana]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G     +  L++     G +     S   +  FD  +++AV+++Q    L+ +G++D  T
Sbjct: 48  GKKYDGLYMLKQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELT 107

Query: 162 LEAMNVP 168
           L+ + +P
Sbjct: 108 LKHVVIP 114


>gi|146293412|ref|YP_001183836.1| lytic murein transglycosylase [Shewanella putrefaciens CN-32]
 gi|145565102|gb|ABP76037.1| lytic murein transglycosylase [Shewanella putrefaciens CN-32]
          Length = 439

 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+E+L  +G                 + ++ FQ    
Sbjct: 363 NGGEPLKVAPPEQPRLSREQVKQLQEKLNEAGF--EVGKPDGVLGRNSMAGIQAFQRSKK 420

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 421 MIADGFPSPEVFAALGLT 438


>gi|329114298|ref|ZP_08243060.1| Putative protein Y4bJ [Acetobacter pomorum DM001]
 gi|326696374|gb|EGE48053.1| Putative protein Y4bJ [Acetobacter pomorum DM001]
          Length = 643

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 16/93 (17%)

Query: 63  IDSDIPIISKETIAQTEKAIA-FYQDILSRGGWPELPIRPL----HLGNSSVSVQRLRER 117
            D  IP            ++A  Y+          L    L       ++      L+++
Sbjct: 422 TDQSIPTNGAACYISAMDSLAEKYRR--------RLSGAALEEASRPIDTH---IALQKK 470

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           LI  G L         +      A+  +Q   G
Sbjct: 471 LIDLGYLPAGSMADGVYGESTRIAIGTWQRVAG 503


>gi|310816562|ref|YP_003964526.1| ErfK/YbiS/YcfS/YnhG family [Ketogulonicigenium vulgare Y25]
 gi|308755297|gb|ADO43226.1| ErfK/YbiS/YcfS/YnhG family [Ketogulonicigenium vulgare Y25]
          Length = 273

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 54/169 (31%), Gaps = 29/169 (17%)

Query: 195 YVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKD 254
           Y L+      L  V    +   +  ++ R   +       I+      YW++P  +  + 
Sbjct: 51  YGLIEDEGYRLPPVSPQYLQGVNRRVLMRYPGELRPGTIEIDPNAKFLYWIMPDGMAWR- 109

Query: 255 MMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDP------------ 302
                     Y     I  +  +G  +   +  W    P   + R+DP            
Sbjct: 110 ----------YSIGVGIEGVGLRGTTIIQRKAKWPGWTPTANMLRRDPALYGPFRGGVPG 159

Query: 303 GKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRVRN 348
           G  + + +  +       +  Y +H T +     N     ++GC+R+ N
Sbjct: 160 GLASPLGARALYLYRNGSDTYYRIHGTNDLESIGNSG---SAGCIRLFN 205


>gi|241764603|ref|ZP_04762619.1| Peptidoglycan-binding domain 1 protein [Acidovorax delafieldii 2AN]
 gi|241365966|gb|EER60592.1| Peptidoglycan-binding domain 1 protein [Acidovorax delafieldii 2AN]
          Length = 575

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 18/137 (13%)

Query: 50  DRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-RPLHLGNSS 108
              D        G+  ++     +      + +     I   G W  +P  + L L  + 
Sbjct: 226 QGLDLAGRIGSYGVKFNVGRDYAQGAGSAMRTLIDLGTIELVGKWARVPYWQCLTLDQTH 285

Query: 109 VSVQ-----------------RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
            + Q                  ++  LI  G L        +    + +A+  FQ   GL
Sbjct: 286 PNFQRQMRDWFDESGPQAQSSLVQSSLISRGYLPLGTEPLPSNSPQLRTALARFQADSGL 345

Query: 152 DPSGMVDSSTLEAMNVP 168
             SG+VD  T E     
Sbjct: 346 VASGVVDFPTYERALRN 362


>gi|297481953|ref|XP_002692352.1| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
           taurus]
 gi|296481308|gb|DAA23423.1| matrix metallopeptidase 24 (membrane-inserted) [Bos taurus]
          Length = 596

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    S A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 31  RLANWLKSYGYLLPYDSRSSALHSGKALQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 88


>gi|86356893|ref|YP_468785.1| putative peptidoglycan-binding protein (cell wall degradation
           activity) [Rhizobium etli CFN 42]
 gi|86280995|gb|ABC90058.1| putative peptidoglycan-binding protein (cell wall degradation
           activity) [Rhizobium etli CFN 42]
          Length = 296

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 5/90 (5%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            I   +D  +    P L          S  V  ++++L+  G    +            +
Sbjct: 98  RIERPEDGTATSAMPALAAPAQQP---SGLVMDIQQQLVRRGLY--NGTADGIIGPRTSA 152

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           A+  FQ   G+  +G      L A+     
Sbjct: 153 AILFFQETVGMAQTGEATPEVLAALKTDAA 182



 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V ++++ L        + G+         +A++ FQ  + L   G  + + L+ + 
Sbjct: 238 VLKIQKGLSNMAY--ANVGIDGVAGEQTRAAIRHFQKHYNLPEDGEPNEAVLKKLK 291


>gi|328780642|ref|XP_393358.4| PREDICTED: matrix metalloproteinase-14-like [Apis mellifera]
          Length = 575

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    S     +  +  A+  FQ   GL+ +G +D  T + M +P
Sbjct: 47  LSQFGYLQPMNPTSGGIISEETLSKAISEFQAFAGLNITGDIDEETYKLMTLP 99


>gi|125554704|gb|EAZ00310.1| hypothetical protein OsI_22327 [Oryza sativa Indica Group]
          Length = 371

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL------SVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           G+    + +L++ L   G L            +  FDA +E A+K++Q   GLD +G +D
Sbjct: 56  GDERQGLGKLKDYLWHFGYLSYPSSSSLSPSFNDLFDADMELAIKMYQGNFGLDVTGDLD 115

Query: 159 SSTLEAMNVP 168
           ++T+  M  P
Sbjct: 116 AATVSQMMAP 125


>gi|21542428|sp|Q9R0S3|MMP17_MOUSE RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
 gi|8052272|emb|CAB92315.1| membrane-type-4 matrix metalloproteinase [Mus musculus]
          Length = 578

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 13/86 (15%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   S        +  A+
Sbjct: 31  ALAAHGGCAAPAPRGEDLSLGVEW---------LSRFGYLPPADPASGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP 168
              Q   GL+ +G++D +TL  M  P
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTP 107


>gi|23097985|ref|NP_691451.1| carboxypeptidase [Oceanobacillus iheyensis HTE831]
 gi|22776209|dbj|BAC12486.1| carboxypeptidase [Oceanobacillus iheyensis HTE831]
          Length = 339

 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 66/225 (29%), Gaps = 19/225 (8%)

Query: 86  QDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
           +D+ +     ELP  PL   +    V  L+  L   G    +      ++  V  A+  F
Sbjct: 41  EDVTANQNNKELPETPLQKLDQGEEVDALQYFLEQLGY---NFSEQGNYNEQVTWAITDF 97

Query: 146 Q-MRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR----YVLVNI 200
           Q  +  L  SG+ +  T + +       + Q + +    + L              +++ 
Sbjct: 98  QLQQEDLLVSGVYNEDTKQKI-----EEVIQSENSYKPGEGLPAPTEPAFTDAGTEIISN 152

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM-MALL 259
           P   L  V                D   P +       +   Y     +   +++    L
Sbjct: 153 PYDQLALVNK---EFSLPADYIPDDLVIPNVPFPFTEDIPKKYMRQAAADALEELFADAL 209

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            ++ +    +     D +         +        F  R  PG+
Sbjct: 210 EENLELYAQSGYRSYDRQDNIFAANAAENGEKHANTFSAR--PGE 252


>gi|307153983|ref|YP_003889367.1| OpcA protein [Cyanothece sp. PCC 7822]
 gi|306984211|gb|ADN16092.1| OpcA protein [Cyanothece sp. PCC 7822]
          Length = 456

 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 2/70 (2%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           ++ L   G       +          A+K  Q  +GL+ +G  +   L  +       I 
Sbjct: 60  QQLLTALGYYS--GPIDGIAGPRTVLAIKAAQKAYGLEITGKSNQQLLTKLQETYAQAIA 117

Query: 175 QLQVNLMRIK 184
           + ++     K
Sbjct: 118 EGRLTNAEEK 127


>gi|218289713|ref|ZP_03493921.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240170|gb|EED07354.1| Peptidoglycan-binding domain 1 protein [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 209

 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            L  G+    V  L++ L   G    +  ++  +     +AV+ FQ   GL P+G VD  
Sbjct: 86  VLQQGDKGSKVVALQQALSALGFF--NYAITGTYGPITAAAVEAFQAAEGLTPTGAVDER 143

Query: 161 TLEAMNVPVDLRIR 174
           TL A+   +     
Sbjct: 144 TLTALQQAMKAHAT 157


>gi|163856176|ref|YP_001630474.1| putative peptidoglycan-binding protein [Bordetella petrii DSM
           12804]
 gi|163259904|emb|CAP42205.1| putative peptidoglycan-binding protein [Bordetella petrii]
          Length = 421

 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 22/79 (27%), Gaps = 2/79 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + L+  LI  G             A   +A++  Q   GL   G     +L 
Sbjct: 345 PGLSRAERRELQSLLIARGY--DIGEPDGLIGARTRTALQAVQREAGLVADGRAGQKSLL 402

Query: 164 AMNVPVDLRIRQLQVNLMR 182
            +          +     R
Sbjct: 403 WLRQNAADPPAGVNAPPAR 421


>gi|152206059|gb|ABS30415.1| light organ matrix metalloproteinase 1 [Euprymna scolopes]
          Length = 265

 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 25/68 (36%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   G ++     SV +      A+KLFQ   GL+ +G V+    E M  P       + 
Sbjct: 45  LRKYGYMNDVNERSVDYAERRTDAIKLFQEFAGLEVTGEVNEEVRELMLKPRCGMKDIVV 104

Query: 178 VNLMRIKK 185
                 + 
Sbjct: 105 GRPENARW 112


>gi|320544342|ref|NP_001188999.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
 gi|318068685|gb|ADV37245.1| matrix metalloproteinase 1, isoform E [Drosophila melanogaster]
          Length = 542

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|157423149|gb|AAI53751.1| LOC100127631 protein [Xenopus (Silurana) tropicalis]
          Length = 483

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 115 RERLIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  L   G L               V+ A+++FQ+   L  +G++D  T++ M  P
Sbjct: 39  KRYLQQFGYLQKPLESDTEDFSSEEVQEALRIFQLSTHLPGTGVLDEDTIDKMRQP 94


>gi|172039052|ref|YP_001805553.1| hypothetical protein cce_4139 [Cyanothece sp. ATCC 51142]
 gi|171700506|gb|ACB53487.1| hypothetical protein cce_4139 [Cyanothece sp. ATCC 51142]
          Length = 109

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 19/84 (22%)

Query: 102 LHLGNSSVSVQRLRERLIIS----------GDLDPSKGLSVAFDAYVESAVKLFQMRHG- 150
           L  G+S  SV+ L + L               +  +      +D   +  VK FQ  +  
Sbjct: 15  LKNGDSGSSVRFLEQLLSSIYWFSQRPNWPTLITENVIFDAKYDDQCQKIVKEFQQNYNA 74

Query: 151 --------LDPSGMVDSSTLEAMN 166
                   +   G+V   T +A+ 
Sbjct: 75  NFPAPAPHITVDGIVGPETWQALG 98


>gi|115351502|ref|YP_773341.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Burkholderia ambifaria AMMD]
 gi|115281490|gb|ABI87007.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Burkholderia ambifaria AMMD]
          Length = 300

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 14/88 (15%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFD 135
           +A+A        G WP+       LG+        V+ L+ +L   G            D
Sbjct: 195 QALAQ----AGVGAWPDDATVAARLGDRDPHALVDVRELQLKLARYGY---DVPTDGVLD 247

Query: 136 AYVESAVKLFQMRHGLDPS--GMVDSST 161
           A        FQ  H       G  D+ T
Sbjct: 248 ARTRRVFAAFQ-MHFRPSDYAGNPDAET 274


>gi|33597706|ref|NP_885349.1| putative peptidoglycan-binding protein [Bordetella parapertussis
           12822]
 gi|33602554|ref|NP_890114.1| putative peptidoglycan-binding protein [Bordetella bronchiseptica
           RB50]
 gi|33574134|emb|CAE38463.1| putative peptidoglycan-binding protein [Bordetella parapertussis]
 gi|33576993|emb|CAE34073.1| putative peptidoglycan-binding protein [Bordetella bronchiseptica
           RB50]
          Length = 409

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + L+E L+  G             A    A++  Q + GL   G     TL+
Sbjct: 347 PGLSRAERRELQELLLARGF--DIGKPDGVIGARTRQALQTVQGQLGLPADGRAGQKTLK 404

Query: 164 AMNVP 168
           A+  P
Sbjct: 405 ALRTP 409


>gi|326931703|ref|XP_003211965.1| PREDICTED: matrix metalloproteinase-24-like [Meleagris gallopavo]
          Length = 557

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            V  L   L   G L PS     +      V+SAV   Q  +G+  +G++D +TLE M  
Sbjct: 14  DVVELEGWLKTYGYLLPSDSQMSAAQSGKAVQSAVATMQRFYGIPVTGVLDQTTLEWMKK 73

Query: 168 P 168
           P
Sbjct: 74  P 74


>gi|89067326|ref|ZP_01154839.1| hypothetical protein OG2516_10816 [Oceanicola granulosus HTCC2516]
 gi|89046895|gb|EAR52949.1| hypothetical protein OG2516_10816 [Oceanicola granulosus HTCC2516]
          Length = 389

 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G S   +  L+E+L+  G       +         +AV+  Q+R G+ 
Sbjct: 319 GAPVYDAGNPRPGLSGEQMVELQEKLVARGH--DVGDVDGILGEKTRAAVQAEQIRLGMP 376

Query: 153 PSGMVDSSTLEAM 165
           P     +  L  +
Sbjct: 377 PDAWPTAELLARL 389


>gi|298247674|ref|ZP_06971479.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
 gi|297550333|gb|EFH84199.1| Peptidoglycan-binding domain 1 protein [Ktedonobacter racemifer DSM
           44963]
          Length = 231

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           G++   V+ L++ L      D +     +   F    + AVK +Q +  +   G V   T
Sbjct: 165 GSTGSWVRTLQQELNARNMRDQNGHALAVDGDFGVNTQYAVKEWQTKEHIQVDGQVGPIT 224

Query: 162 L 162
            
Sbjct: 225 W 225


>gi|255524547|ref|ZP_05391501.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296185805|ref|ZP_06854212.1| hypothetical protein CLCAR_1244 [Clostridium carboxidivorans P7]
 gi|255511700|gb|EET87986.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium carboxidivorans P7]
 gi|296049633|gb|EFG89060.1| hypothetical protein CLCAR_1244 [Clostridium carboxidivorans P7]
          Length = 466

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 11/108 (10%)

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA-----STKI 313
           + +   +   N   + +                      ++Q+   ++ +      S  +
Sbjct: 349 ITRQHLWFYKNGRLISEGDIVTGDPNRGCSTVLGTYMLNYKQNGATLSGLNYETEVSYWM 408

Query: 314 EFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRVRNIIDLDVWLLKD 359
            F+   N  +HD      F      R  T GCV V   +DL   +  +
Sbjct: 409 PFFG--NIGIHDATWRYSFGGDIYKRNGTHGCVNV--PLDLAKAIFDN 452


>gi|73950335|ref|XP_544383.2| PREDICTED: similar to matrix metalloproteinase 14
           (membrane-inserted) [Canis familiaris]
          Length = 741

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 105 GNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSS 160
           G S    +V  +   L + G L           +   + SA+   Q  +G+  +G++D  
Sbjct: 106 GGSGPNRAVVAVNW-LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEE 164

Query: 161 TLEAMNVP----VDLRIRQLQVNLMRIK 184
           T   M  P     D    +++ NL R +
Sbjct: 165 TKAWMKRPRCGVPDQFGVRVKANLRRRR 192


>gi|71065257|ref|YP_263984.1| membrane-bound lytic murein transglycosylase [Psychrobacter
           arcticus 273-4]
 gi|71038242|gb|AAZ18550.1| possible membrane-bound lytic murein transglycosylase
           [Psychrobacter arcticus 273-4]
          Length = 434

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           ++   KA+     +     WP    RPL    S+  V+ L++RL  SG    +KG     
Sbjct: 350 VSLLGKALVGQDGLQKS--WPRY-ERPL----STSQVRNLQQRLTSSGY--DTKGADGIV 400

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSS 160
                 A + +Q  +G  P G +   
Sbjct: 401 GTNTRKAFQRWQADNGQTPDGFITQG 426


>gi|322435596|ref|YP_004217808.1| YD repeat protein [Acidobacterium sp. MP5ACTX9]
 gi|321163323|gb|ADW69028.1| YD repeat protein [Acidobacterium sp. MP5ACTX9]
          Length = 2294

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 22/69 (31%), Gaps = 8/69 (11%)

Query: 292  EPPNFIFRQDPGKINAMASTKIEFY--SRNNTYMHDT------PEPILFNNVVRFETSGC 343
               N  + +     NA    ++          ++H T      P        +   + GC
Sbjct: 2206 NSANTPWSKTALGGNAFGPYQLHIKELDGRGIFIHGTMGPGWSPTTWGNALFLSPTSHGC 2265

Query: 344  VRVRNIIDL 352
            +R+ N  D+
Sbjct: 2266 IRMCNRDDI 2274


>gi|156384222|ref|XP_001633230.1| predicted protein [Nematostella vectensis]
 gi|156220297|gb|EDO41167.1| predicted protein [Nematostella vectensis]
          Length = 515

 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 2/92 (2%)

Query: 118 LIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G LD     +        +  A++ FQ   GL  +G++D++T   M  P       
Sbjct: 27  LTRYGYLDAPNRKTGAIRSRQDLSRAIRQFQRYTGLQETGIMDAATKSKMEQPRCGLPDI 86

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
           +  +    +K      G R+    I       
Sbjct: 87  VGTSENARRKRRYALQGSRWEKSEITYRFASY 118


>gi|294678909|ref|YP_003579524.1| lytic murein transglycosylase [Rhodobacter capsulatus SB 1003]
 gi|294477729|gb|ADE87117.1| lytic murein transglycosylase [Rhodobacter capsulatus SB 1003]
          Length = 388

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P +  R    G +   ++ L+ RL   G       +          AV++ Q R GL 
Sbjct: 318 GAPRVDPRAAEPGLAPAQMKALQARLQARGH--DVGPIDGILGEKTREAVQIEQGRLGLP 375

Query: 153 PSGMVDSSTLEAM 165
                  + L+ +
Sbjct: 376 ADAWPTPALLDRL 388


>gi|86749108|ref|YP_485604.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris HaA2]
 gi|86572136|gb|ABD06693.1| negative regulator of AmpC, AmpD [Rhodopseudomonas palustris HaA2]
          Length = 288

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 27/85 (31%), Gaps = 10/85 (11%)

Query: 86  QDILSRG--GW----PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           + + S G   W    P      L  G     VQ L+  L   G       ++  FD    
Sbjct: 187 RALASSGVGHWVEPAPIDAGAVLRHGAEGEPVQVLQRALADYGY---GIAINGKFDHATF 243

Query: 140 SAVKLFQMRHG-LDPSGMVDSSTLE 163
             V  FQ         G+ D STL 
Sbjct: 244 EVVTAFQRHFRPEKVDGIADGSTLA 268


>gi|320544352|ref|NP_001189004.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
 gi|318068690|gb|ADV37250.1| matrix metalloproteinase 1, isoform J [Drosophila melanogaster]
          Length = 512

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|224371348|ref|YP_002605512.1| hypothetical protein HRM2_42920 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694065|gb|ACN17348.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 394

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           + R++  L+ +G       +         +AV  FQ    L  +  +   TL+A+ V  
Sbjct: 338 ITRIQNALVKAGY--DPGPVDGVIGTQTMAAVNKFQADAKLAITKYLTIETLQALKVKP 394


>gi|197117605|ref|YP_002138032.1| peptidoglycan-binding ATPase [Geobacter bemidjiensis Bem]
 gi|197086965|gb|ACH38236.1| peptidoglycan-binding ATPase, putative [Geobacter bemidjiensis Bem]
          Length = 536

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             V+ L+  L   G  D    ++       ++AV  FQ R  L   G +   TL
Sbjct: 460 AGVKLLQGLLKQVGCYD--GAVNGELSDKTQAAVAEFQRREQLTADGKLGGQTL 511


>gi|15718389|dbj|BAB68366.1| gelatinase [Paralichthys olivaceus]
          Length = 673

 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 88  ILSRGGWPELPIRPLH---LGNSSVSVQR--LRE-RLIISGDLDPSKGLSVAFDAYVESA 141
           ++ + GW  LP+R +     G+   +V    L E  L   G LD               A
Sbjct: 13  VIVQDGW-SLPLRSISVTFPGDILKNVTDTDLAETYLKRFGYLDKMHRSGFQSMVSTAKA 71

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
           +K+ Q + GL  +G +D STLEAM  P      +   Q     +K   +        L  
Sbjct: 72  LKMMQRQMGLKETGKLDKSTLEAMKQPRCGVPDVANYQTFEGDLKW--DHNDVTYRTLNY 129

Query: 200 IPAASLEAVEN 210
            P      +++
Sbjct: 130 SPDMESSLIDD 140


>gi|321462023|gb|EFX73050.1| hypothetical protein DAPPUDRAFT_325672 [Daphnia pulex]
          Length = 533

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 118 LIISGDLDPSKGLSV---AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---VDL 171
           L   G L+P    S         V +A+  FQ   GLDP+G+V+  TL  M  P   +  
Sbjct: 31  LASFGYLEPRLKNSSTASVSANTVRNAISDFQSYAGLDPTGIVNEETLTWMRKPRCGLPD 90

Query: 172 RIRQLQVNLMRIKKL 186
           RI     +  R + +
Sbjct: 91  RIIPEGSSTRRKRSI 105


>gi|304391498|ref|ZP_07373440.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
 gi|303295727|gb|EFL90085.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
          Length = 196

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 5/46 (10%)

Query: 315 FYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLK 358
            +      +H T        + R  + GCVR+   N   L   + +
Sbjct: 145 MFYHRGFAIHGTNS---IKRLGRVASHGCVRLHPSNAATLFSLVRR 187


>gi|306844345|ref|ZP_07476937.1| lytic murein transglycosylase [Brucella sp. BO1]
 gi|306275417|gb|EFM57158.1| lytic murein transglycosylase [Brucella sp. BO1]
          Length = 410

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQAKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|326677672|ref|XP_698601.5| PREDICTED: matrix metalloproteinase-17 [Danio rerio]
          Length = 588

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS  ++        +  A+K  Q   GL+ +G++D +TL  M  P
Sbjct: 41  LSKFGYLPPSDPVNGQLQTKEALTKAIKAMQRFGGLEETGVLDQATLGLMKTP 93


>gi|260836059|ref|XP_002613024.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
 gi|229298407|gb|EEN69033.1| hypothetical protein BRAFLDRAFT_266228 [Branchiostoma floridae]
          Length = 494

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 6/57 (10%)

Query: 118 LIISGDLD------PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G LD       S       D  V  AV LFQ    L  +G +D  T++ M++P
Sbjct: 28  LTKYGYLDDGMMSKASDMTPTEMDDMVRDAVMLFQEMAHLPMTGRLDEMTMQQMSMP 84


>gi|315925294|ref|ZP_07921506.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621415|gb|EFV01384.1| conserved hypothetical protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 663

 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 54/228 (23%), Gaps = 87/228 (38%)

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
            A        ++ +  +      +    +    + V+ P  +L+A  NG+  L + VI G
Sbjct: 514 RAPGSTARPYVKMVPKSPKAFGWMP---VSPTCICVDRPHQTLKAYVNGREILSTPVITG 570

Query: 223 RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVF 282
           R    TP  + +I                        +Q P  L                
Sbjct: 571 RPGMSTPAGNYKI----------------------RAKQSPSVLIGPGYRSYVR------ 602

Query: 283 VEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTP---------EPILFN 333
                                         + F  RN+  +HD              L  
Sbjct: 603 ----------------------------YWMPF-IRNSIGIHDASWQDAKGYGGNAYLIG 633

Query: 334 NVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVK 381
                 + GCV              +TP W+   +           V+
Sbjct: 634 RG----SHGCV--------------NTPLWAVKKVYRTFPVGTPVYVR 663


>gi|215778396|ref|YP_002261536.1| putative cell wall degradation protein [Aliivibrio salmonicida
           LFI1238]
 gi|208011441|emb|CAQ81905.1| putative cell wall degradation protein [Aliivibrio salmonicida
           LFI1238]
          Length = 739

 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 15/91 (16%)

Query: 99  IRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR----HG 150
              +  G+        ++ ++E L+         G    F +  E AV  FQ      H 
Sbjct: 464 KGAIKKGDKDAPKSNEIKTIQEALLTLNFDLGKYGADGDFGSGTEQAVIDFQREFVPTHE 523

Query: 151 L-------DPSGMVDSSTLEAMNVPVDLRIR 174
           +          G+V + TL A++  V ++ +
Sbjct: 524 VHPEYEMKKSDGVVGNQTLLALDEAVTIKWK 554


>gi|154509325|ref|ZP_02044967.1| hypothetical protein ACTODO_01850 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798959|gb|EDN81379.1| hypothetical protein ACTODO_01850 [Actinomyces odontolyticus ATCC
           17982]
          Length = 344

 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 100 RPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
           R    G S    V++L   L   G        +  FD    +A+K +Q    L  SG + 
Sbjct: 98  RAFEEGMSDGEDVRQLETALSELGYF--EATPNAHFDWNTIAAIKKWQKALTLPQSGSLP 155

Query: 159 SSTL 162
             T+
Sbjct: 156 LGTV 159


>gi|306843207|ref|ZP_07475819.1| lytic murein transglycosylase [Brucella sp. BO2]
 gi|306286597|gb|EFM58172.1| lytic murein transglycosylase [Brucella sp. BO2]
          Length = 410

 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQAKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|239941796|ref|ZP_04693733.1| hypothetical protein SrosN15_12419 [Streptomyces roseosporus NRRL
           15998]
 gi|239988256|ref|ZP_04708920.1| hypothetical protein SrosN1_13196 [Streptomyces roseosporus NRRL
           11379]
          Length = 771

 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 21/160 (13%)

Query: 69  IISKETIAQTEKAIAFYQDILSR------GGWPELPIRPLHLGNSSVSVQRLRER----- 117
           I S++       A+ +   I +       G    L    L  G+S   V           
Sbjct: 165 IYSRDVQKSLLTALQYELGISAPNGNFGPGTQAALRNVTLKEGDSGTLVSLFTAACVFNE 224

Query: 118 -LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            L I          +  FDA     VKLFQ    +  SG  D +T   + V +    R++
Sbjct: 225 PLPIGALEARRTTFTPTFDAKTTGYVKLFQEFSYIPESGKGDYTTWAQLLVSMGDPDRKV 284

Query: 177 QVNLM-------RIKKLLEQKMG--LRYVLVNIPAASLEA 207
             +         R K L +       RY+    P    E 
Sbjct: 285 TASDTRFVIDAPRAKWLYDNDYRIVGRYLYNPDPNYEKEI 324


>gi|254719477|ref|ZP_05181288.1| Putative peptidoglycan binding domain 1 [Brucella sp. 83/13]
 gi|306839256|ref|ZP_07472073.1| lytic murein transglycosylase [Brucella sp. NF 2653]
 gi|306405803|gb|EFM62065.1| lytic murein transglycosylase [Brucella sp. NF 2653]
          Length = 410

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQAKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|254711180|ref|ZP_05172991.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis B2/94]
 gi|256029561|ref|ZP_05443175.1| peptidoglycan binding domain-containing protein [Brucella
           pinnipedialis M292/94/1]
          Length = 220

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L         +      A+  FQ   G+  +G+ DS TL  + +P
Sbjct: 161 LIKLGYLT-DSDADGEYGPLTRFALTKFQQAKGIQQTGLPDSVTLVRLFIP 210


>gi|225629039|ref|ZP_03787073.1| Conserved hypothetical protein [Brucella ceti str. Cudo]
 gi|260167350|ref|ZP_05754161.1| peptidoglycan binding domain-containing protein [Brucella sp.
           F5/99]
 gi|225616885|gb|EEH13933.1| Conserved hypothetical protein [Brucella ceti str. Cudo]
          Length = 220

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L         +      A+  FQ   G+  +G+ DS TL  + +P
Sbjct: 161 LIKLGYLT-DSDADGEYGPLTRFALTKFQQAKGIQQTGLPDSVTLVRLFIP 210


>gi|146276937|ref|YP_001167096.1| hypothetical protein Rsph17025_0888 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145555178|gb|ABP69791.1| hypothetical protein Rsph17025_0888 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 152

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 7/66 (10%)

Query: 90  SRGGWPELP-IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
             G W ++P    L        V  L+  L + G       +S   D    +A++ FQ  
Sbjct: 50  DEGRWFQVPCPDALTP----ERVATLQRALEVRGL--HRGAISGEMDRETRAAIRRFQEP 103

Query: 149 HGLDPS 154
            GLD  
Sbjct: 104 LGLDSD 109


>gi|291445243|ref|ZP_06584633.1| ykuG [Streptomyces roseosporus NRRL 15998]
 gi|291348190|gb|EFE75094.1| ykuG [Streptomyces roseosporus NRRL 15998]
          Length = 783

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 21/160 (13%)

Query: 69  IISKETIAQTEKAIAFYQDILSR------GGWPELPIRPLHLGNSSVSVQRLRER----- 117
           I S++       A+ +   I +       G    L    L  G+S   V           
Sbjct: 177 IYSRDVQKSLLTALQYELGISAPNGNFGPGTQAALRNVTLKEGDSGTLVSLFTAACVFNE 236

Query: 118 -LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
            L I          +  FDA     VKLFQ    +  SG  D +T   + V +    R++
Sbjct: 237 PLPIGALEARRTTFTPTFDAKTTGYVKLFQEFSYIPESGKGDYTTWAQLLVSMGDPDRKV 296

Query: 177 QVNLM-------RIKKLLEQKMG--LRYVLVNIPAASLEA 207
             +         R K L +       RY+    P    E 
Sbjct: 297 TASDTRFVIDAPRAKWLYDNDYRIVGRYLYNPDPNYEKEI 336


>gi|162456479|ref|YP_001618846.1| putative Rhs element Vgr protein [Sorangium cellulosum 'So ce 56']
 gi|161167061|emb|CAN98366.1| Putative Rhs element Vgr protein [Sorangium cellulosum 'So ce 56']
          Length = 880

 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
            LR RL   G  + +       D    +A+  FQ  H L  SG +D+ T
Sbjct: 823 ALR-RLKNLGYYEGAIKEDPPADKGFRAALAWFQKDHELGESGELDAQT 870


>gi|256831334|ref|YP_003160061.1| hypothetical protein Jden_0082 [Jonesia denitrificans DSM 20603]
 gi|256684865|gb|ACV07758.1| hypothetical protein Jden_0082 [Jonesia denitrificans DSM 20603]
          Length = 391

 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 12/166 (7%)

Query: 88  ILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           +++ G  P    R LH G+S   V++L   L   G     +      D+   +A+   Q 
Sbjct: 113 VIAAGNTPA--YRDLHPGDSGPDVKQLAALLNTLGY--SVEPTQQTIDSQFTAAIH--QW 166

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRY---VLVNIPAAS 204
              L   G+  S T+ A +V     +            +     G       +   PA  
Sbjct: 167 HKDL---GVPRSETVTAGDVLYVPTLPTRVAYAPDAPSIGAVLTGQDPLILTVAAEPAFH 223

Query: 205 LEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSI 250
           ++        + +   V           + I  I  N       ++
Sbjct: 224 IDLTTAQAQRITTGNTVTITPPTGDPWIAEITTIEPNTDGGHTATL 269


>gi|256376604|ref|YP_003100264.1| peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
 gi|255920907|gb|ACU36418.1| Peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
          Length = 396

 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 11/83 (13%)

Query: 91  RGGWPELPIRPL--------HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           RGG PE+  R L         +G     V+ L++ L+ +        +  +F       +
Sbjct: 211 RGGTPEVDDRLLFSPACDAVVMGQHDSCVRELQQLLVRA---RARMSVDGSFGPETLRRL 267

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM 165
             FQ+  GL+P G+VD+ T EA+
Sbjct: 268 TAFQVLAGLEPRGVVDAGTREAL 290


>gi|153207658|ref|ZP_01946322.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154706813|ref|YP_001424546.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161830871|ref|YP_001596648.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
 gi|212218524|ref|YP_002305311.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii CbuK_Q154]
 gi|120576477|gb|EAX33101.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154356099|gb|ABS77561.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii Dugway
           5J108-111]
 gi|161762738|gb|ABX78380.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 331]
 gi|212012786|gb|ACJ20166.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii CbuK_Q154]
          Length = 160

 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 33/172 (19%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-------RQTPILHSRINRIMFNPYWVI 246
            Y+ V+IP+ +L    + +V  R  V   R          +TP     I   +       
Sbjct: 3   TYLTVDIPSQTLTLFRDNQVIKRYRVSTARNGPGELINSEKTPRGWHIIRAKV---GEGC 59

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + +  +           LK           ++  +  + W S               N
Sbjct: 60  PPNTVFVERRPTGEVYSPALKRR------YPDRDWVLTRILWLSGLEVG---------KN 104

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            + +       R   Y+H + + I+        + GC+R+ N  II+L   +
Sbjct: 105 RLGNVDTM---RRYVYIHGSGDEIIMGKPG---SRGCIRMHNHDIIELFDEV 150


>gi|83717816|ref|YP_439539.1| hypothetical protein BTH_II1343 [Burkholderia thailandensis E264]
 gi|83651641|gb|ABC35705.1| gp28 [Burkholderia thailandensis E264]
          Length = 250

 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 20/64 (31%), Gaps = 3/64 (4%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
           + +G       +S  +D   E AV+  Q    L   G+    T   +             
Sbjct: 1   MRAGY---PVDVSHLYDEQTERAVQTLQAAASLVVDGIAGPKTYRVLASGQRDPKHLTDA 57

Query: 179 NLMR 182
           +L R
Sbjct: 58  DLAR 61


>gi|169350988|ref|ZP_02867926.1| hypothetical protein CLOSPI_01765 [Clostridium spiroforme DSM 1552]
 gi|169292050|gb|EDS74183.1| hypothetical protein CLOSPI_01765 [Clostridium spiroforme DSM 1552]
          Length = 730

 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 40/122 (32%), Gaps = 7/122 (5%)

Query: 49  NDRFDNFLARVDMGIDSDIP-IISKETIAQTEKAIAFYQDILSR-GGWPELPIRP---LH 103
               +                I   +TI    +A+   + I S    +          ++
Sbjct: 9   QQWLNLTYGDDSRFNRVTEDGITGWDTIYGLRRALQIEEGITSTSNSFGPSTYDKCPDIN 68

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G++   V  ++  L   G      G    + +   +AVK F+   G+  +G ++   + 
Sbjct: 69  EGDTGNLVYIVQGGLWCKGF--NPGGFDGNYGSRTSAAVKRFKEATGIGGNGNMNKDFMR 126

Query: 164 AM 165
           A+
Sbjct: 127 AL 128


>gi|163752325|ref|ZP_02159522.1| membrane-bound lytic transglycolase-related protein [Shewanella
           benthica KT99]
 gi|161327772|gb|EDP98957.1| membrane-bound lytic transglycolase-related protein [Shewanella
           benthica KT99]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             V+ L+ +L   G                ++ ++ +Q   GL   G  D +T +A+ + 
Sbjct: 320 ARVKALQAKLNDKGF--DVGKPDGVMGKNSKTGLRAYQQSVGLLADGFPDEATFKAIEIN 377


>gi|320544350|ref|NP_001189003.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
 gi|320544354|ref|NP_001189005.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
 gi|318068689|gb|ADV37249.1| matrix metalloproteinase 1, isoform I [Drosophila melanogaster]
 gi|318068691|gb|ADV37251.1| matrix metalloproteinase 1, isoform K [Drosophila melanogaster]
          Length = 528

 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +D+ T++ M++P     
Sbjct: 37  LSQFGYLPASARNPASSGLHDQRTWVSAIEEFQSFAGLNITGELDAETMKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 97  DRVGTGDSRSKRYALQGSRWR 117


>gi|170748425|ref|YP_001754685.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium radiotolerans JCM 2831]
 gi|170654947|gb|ACB24002.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylobacterium radiotolerans JCM 2831]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 20/133 (15%)

Query: 46  SIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI------ 99
                + +  +A +   I    PI  +  +A ++ A    +D      W  L        
Sbjct: 110 PYPEAQVEAVIA-LARDILGRWPIPPERVLAHSDVAPERKEDPGEIFPWDRLAAAGVGHH 168

Query: 100 ---------RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
                    R L  G++   V+ L+    + G       ++  FDA   + V  FQ    
Sbjct: 169 VPPARLQDGRFLARGDAGQPVEALQAMFALYGY---DLPVTGTFDARTRAVVTAFQRHFR 225

Query: 151 -LDPSGMVDSSTL 162
                G+ D+ST+
Sbjct: 226 PARVDGVADASTI 238


>gi|315298621|gb|EFU57876.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|331659613|ref|ZP_08360551.1| putative general secretion pathway protein A [Escherichia coli
           TA206]
 gi|324009014|gb|EGB78233.1| hypothetical protein HMPREF9532_01265 [Escherichia coli MS 57-2]
 gi|331052828|gb|EGI24861.1| putative general secretion pathway protein A [Escherichia coli
           TA206]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|331649120|ref|ZP_08350206.1| putative general secretion pathway protein A [Escherichia coli
           M605]
 gi|330909365|gb|EGH37879.1| general secretion pathway protein A [Escherichia coli AA86]
 gi|331041618|gb|EGI13762.1| putative general secretion pathway protein A [Escherichia coli
           M605]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|306816334|ref|ZP_07450472.1| general secretion pathway protein A [Escherichia coli NC101]
 gi|305850730|gb|EFM51187.1| general secretion pathway protein A [Escherichia coli NC101]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|281180358|dbj|BAI56688.1| general secretion pathway protein A [Escherichia coli SE15]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|258512822|ref|YP_003186256.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257479548|gb|ACV59867.1| ErfK/YbiS/YcfS/YnhG family protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 339

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQVNLMRIKKLLEQKMG 192
               E AV  F+ +H L   G+     + A++       R  Q+  + + +   L +   
Sbjct: 169 TPITEGAVMAFESQHHLAVDGIAGPDVIHALSEALAAGERAPQVPYSYILVTTSLPE--- 225

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI 235
                      +LE   NGK+ L S    G     TP     +
Sbjct: 226 -----------TLELWVNGKLVLTSLCNTGIPQAPTPYGTYGV 257


>gi|218673768|ref|ZP_03523437.1| putative hemaglutinin protein [Rhizobium etli GR56]
          Length = 182

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           +++ ++  L  +G    +        A   +A+K FQ   G  P G V  +T+ A+    
Sbjct: 118 AIRNIQAILNNNGF--DAGVPDGEMGAKTVAAIKNFQKSIGQQPDGKVTDATVRALLERN 175

Query: 170 DLRIRQL 176
               + +
Sbjct: 176 KQVAKAI 182


>gi|126335321|ref|XP_001371136.1| PREDICTED: similar to Purinergic receptor P2Y, G-protein coupled, 5
           [Monodelphis domestica]
          Length = 569

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDP 153
            +P R L    S+  V    + L   G L P             +  A+K+ Q   GL  
Sbjct: 22  PVPARALEP--SAQDVSLSVDWLTRYGYLPPPHPAQAQLQSPEQLRDAIKIMQRFAGLKE 79

Query: 154 SGMVDSSTLEAMNVP 168
           +G++D +TL  M  P
Sbjct: 80  TGLMDEATLSTMKKP 94


>gi|110643562|ref|YP_671292.1| general secretion pathway protein A [Escherichia coli 536]
 gi|191171523|ref|ZP_03033071.1| putative general secretory pathway protein A [Escherichia coli F11]
 gi|300974002|ref|ZP_07172409.1| hypothetical protein HMPREF9553_00369 [Escherichia coli MS 200-1]
 gi|110345154|gb|ABG71391.1| probable general secretion pathway protein A [Escherichia coli 536]
 gi|190908150|gb|EDV67741.1| putative general secretory pathway protein A [Escherichia coli F11]
 gi|222035032|emb|CAP77775.1| general secretion pathway protein A [Escherichia coli LF82]
 gi|300309012|gb|EFJ63532.1| hypothetical protein HMPREF9553_00369 [Escherichia coli MS 200-1]
 gi|312947874|gb|ADR28701.1| general secretion pathway protein A [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|324014939|gb|EGB84158.1| hypothetical protein HMPREF9533_01001 [Escherichia coli MS 60-1]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|25152490|ref|NP_741156.1| Zinc MetalloProtease family member (zmp-1) [Caenorhabditis elegans]
 gi|21328419|gb|AAM48565.1|U41266_2 Zinc metalloprotease protein 1 [Caenorhabditis elegans]
 gi|3152406|dbj|BAA28353.1| matrix metalloproteinase [Caenorhabditis elegans]
          Length = 521

 Score = 40.0 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L  + G +      +  A+K  Q   GL+ +G +D  T++ M  P
Sbjct: 30  LQKYGYL--TSGDNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERP 78


>gi|241202992|ref|YP_002974088.1| peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM1325]
 gi|240856882|gb|ACS54549.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM1325]
          Length = 1263

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V+ ++  L  +G    +        A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1199 AVRNIQAILNNNGF--DAGVPDGEMGAKTVTAIKNFQKSVGQEPDGKVTDATVKAL 1252


>gi|209547818|ref|YP_002279735.1| peptidoglycan-binding protein [Rhizobium leguminosarum bv. trifolii
            WSM2304]
 gi|209533574|gb|ACI53509.1| Peptidoglycan-binding domain 1 protein [Rhizobium leguminosarum bv.
            trifolii WSM2304]
          Length = 1260

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V+ ++  L  +G    +        A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1196 AVRNIQAILNNNGF--DAGTPDGEMGAKTVTAIKNFQKSIGQEPDGKVTDATVKAL 1249


>gi|110834853|ref|YP_693712.1| hypothetical protein ABO_1992 [Alcanivorax borkumensis SK2]
 gi|110647964|emb|CAL17440.1| hypothetical protein ABO_1992 [Alcanivorax borkumensis SK2]
          Length = 357

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+RL++ L   G       +   + +   +AV  +Q  + L   G +   TL+ + V
Sbjct: 300 DVVRRLQKALAAKGY--DPVWIDGVYGSKTRAAVIAYQKDNDLAS-GQLTMQTLDHLGV 355


>gi|315182466|gb|ADT89379.1| VgrG protein [Vibrio furnissii NCTC 11218]
          Length = 1073

 Score = 40.0 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%), Gaps = 11/73 (15%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH----------- 149
               G+    V+ ++  LI  G    + G   +F    E  VK+FQ  +           
Sbjct: 747 SYKTGSKGQEVELIQNALIKLGFDLGTYGADGSFGNTTERQVKMFQQSYTPSHSTHPDYK 806

Query: 150 GLDPSGMVDSSTL 162
                G+V   TL
Sbjct: 807 VGKVDGIVGQGTL 819


>gi|29654387|ref|NP_820079.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 493]
 gi|29541654|gb|AAO90593.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii RSA 493]
          Length = 160

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 33/172 (19%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-------RQTPILHSRINRIMFNPYWVI 246
            Y+ V+IP+ +L    + +V  R  V   R          +TP     I   +       
Sbjct: 3   TYLTVDIPSQTLTLFRDNQVIKRYRVSTARNGPGELINSEKTPRGWHIIRAKV---GEGC 59

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + +  +           LK           ++  +  + W S               N
Sbjct: 60  PPNTVFVERRPTGEVYSPALKRR------YPDRDWVLTRILWLSGLEVG---------KN 104

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            + +       R   Y+H + + I+        + GC+R+ N  II+L   +
Sbjct: 105 RLGNVDTM---RRYVYIHGSGDEIIMGKPG---SRGCIRMHNHDIIELFDEV 150


>gi|311255637|ref|XP_003126306.1| PREDICTED: matrix metalloproteinase-19-like [Sus scrofa]
          Length = 540

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPS 154
            +  +    G    +V    + L+  G L      S  F    +  A++ FQ    L  S
Sbjct: 15  TVSGQAPGPGEKEAAV----DYLLQYGYLQKPLEGSDDFRPEDIMEALRAFQEASELPVS 70

Query: 155 GMVDSSTLEAMNVP 168
           G +D +T   M  P
Sbjct: 71  GQLDDATRVRMRQP 84


>gi|182436438|ref|YP_001824157.1| hypothetical protein SGR_2645 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326777062|ref|ZP_08236327.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464954|dbj|BAG19474.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326657395|gb|EGE42241.1| ErfK/YbiS/YcfS/YnhG family protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 238

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 8/99 (8%)

Query: 140 SAVKLFQMRHGLDPS-GMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
            A++ FQ  HG+ P+ G     T   MN  +  +      N  +         G    + 
Sbjct: 71  KAIQKFQKAHGITPTIGYAGPLTWRTMNTMLAQKAAGKNPNKAKK---CPTDKGRIACVD 127

Query: 199 NIPAASLEAVENGKVGL--RSTVIVGRVDRQTPILHSRI 235
                 L  +++GK        V  GR   +T     +I
Sbjct: 128 LT--RQLSWIQDGKKLTYGPVPVRTGRNGAETRTGSKKI 164


>gi|150396145|ref|YP_001326612.1| hypothetical protein Smed_0922 [Sinorhizobium medicae WSM419]
 gi|150027660|gb|ABR59777.1| ErfK/YbiS/YcfS/YnhG family protein [Sinorhizobium medicae WSM419]
          Length = 408

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +V+ L+  L   G    +            +A++ FQ   G    G +    ++A+
Sbjct: 214 ENVRDLQTLLNTLGY--DAGVPDGVNGPTTAAAIETFQGEEGRPVDGKITPELIDAV 268


>gi|110637877|ref|YP_678084.1| hypothetical protein CHU_1473 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280558|gb|ABG58744.1| hypothetical protein CHU_1473 [Cytophaga hutchinsonii ATCC 33406]
          Length = 308

 Score = 40.0 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 29/154 (18%)

Query: 101 PLHLGNSSVSVQRLRERLI-ISGD--LDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           PL LG+    V +L++ L  + G   L+    +   F +  + A+K      GL  +  V
Sbjct: 80  PLKLGSRGSRVTQLQQALQNVLGAKVLEQYTKIDGIFGSGTQKALKA----AGLPVT--V 133

Query: 158 DSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRS 217
           +  T  ++      R   L V          Q +G +          L     GK     
Sbjct: 134 NEDTFNSIA--AKDRFIPLPVQ-------TPQSLGSK----------LYIYATGK-NFDG 173

Query: 218 TVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
            + V +    T    +  +  + +  + + +SI+
Sbjct: 174 VMTVLQQLNTTADYSAANSSFVGSQIFSVSKSIV 207


>gi|119909119|ref|XP_590696.3| PREDICTED: matrix metalloproteinase 17 [Bos taurus]
 gi|297484686|ref|XP_002694502.1| PREDICTED: MMP17 protein-like [Bos taurus]
 gi|296478663|gb|DAA20778.1| MMP17 protein-like [Bos taurus]
          Length = 591

 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 51  LSRFGYLPPADPETGQLQTPEELSKAIVAMQQFGGLEATGVLDEATLALMKTPRCSLPDL 110

Query: 176 LQVNLMRIK 184
             V L R +
Sbjct: 111 PAVALARRR 119


>gi|297458750|ref|XP_616761.4| PREDICTED: matrix metallopeptidase 24 (membrane-inserted) [Bos
           taurus]
          Length = 568

 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    S A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 8   LKSYGYLLPYDSRSSALHSGKALQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 60


>gi|254447275|ref|ZP_05060742.1| ErfK/YbiS/YcfS/YnhG family protein [gamma proteobacterium HTCC5015]
 gi|198263414|gb|EDY87692.1| ErfK/YbiS/YcfS/YnhG family protein [gamma proteobacterium HTCC5015]
          Length = 184

 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 5/41 (12%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDV 354
                 Y+H T E           + GCVR++N    +L  
Sbjct: 134 SHDRYIYIHGTHEEGRIGQ---AASIGCVRMKNAEVTELFE 171


>gi|239941513|ref|ZP_04693450.1| hypothetical protein SrosN15_10992 [Streptomyces roseosporus NRRL
           15998]
 gi|239987978|ref|ZP_04708642.1| hypothetical protein SrosN1_11776 [Streptomyces roseosporus NRRL
           11379]
          Length = 432

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 26/86 (30%), Gaps = 9/86 (10%)

Query: 89  LSRGGWP----ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAV 142
              GG P      P       G S+  V RL ++L+  G       G S  +       V
Sbjct: 345 AGAGGSPNTAVAFPGRGYFKPGQSNSHVDRLGKQLVKKGYGKHYVSGPSPLWTEADRRNV 404

Query: 143 KLFQMRHG---LDPSGMVDSSTLEAM 165
           + FQ   G       G     T   +
Sbjct: 405 EAFQRAQGWRGGAADGYPGPETWRRL 430


>gi|332085474|gb|EGI90640.1| putative peptidoglycan binding domain protein [Shigella boydii
           5216-82]
          Length = 466

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 369 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 426

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 427 KTDGVVGFSTL 437


>gi|323939255|gb|EGB35467.1| gspA protein [Escherichia coli E482]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|323934479|gb|EGB30887.1| general secretion pathway protein A [Escherichia coli E1520]
          Length = 477

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 380 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 437

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 438 KTDGVVGFSTL 448


>gi|319782828|ref|YP_004142304.1| lytic murein transglycosylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168716|gb|ADV12254.1| lytic murein transglycosylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 393

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 7/89 (7%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           T A T   +A         G P L  R    G ++  ++ L+ +L   G       +   
Sbjct: 309 TYALTAANLA-----ARLAGAPPLDPRNPETGLNNEQMKALQTKLEAKGY--DVGTVDGI 361

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                  A++  Q R GL   G      L
Sbjct: 362 LGTNTREAIRKEQTRLGLPVDGWPTPELL 390


>gi|331684965|ref|ZP_08385551.1| general secretory pathway component, cryptic [Escherichia coli
           H299]
 gi|331077336|gb|EGI48548.1| general secretory pathway component, cryptic [Escherichia coli
           H299]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|300932216|ref|ZP_07147495.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300460040|gb|EFK23533.1| conserved hypothetical protein [Escherichia coli MS 187-1]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|297516593|ref|ZP_06934979.1| general secretory pathway component, cryptic [Escherichia coli
           OP50]
          Length = 462

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 365 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 422

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 423 KTDGVVGFSTL 433


>gi|293412742|ref|ZP_06655410.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468389|gb|EFF10882.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 192

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 95  WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 152

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 153 KTDGVVGFSTL 163


>gi|282897264|ref|ZP_06305266.1| OpcA [Raphidiopsis brookii D9]
 gi|281197916|gb|EFA72810.1| OpcA [Raphidiopsis brookii D9]
          Length = 456

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           L  +G    +  +      + +++++  Q +HGL  +G+    T+  +  
Sbjct: 65  LAATGFY--TGPIDGILGPHTKTSIREVQKKHGLSETGIPTPETISVLRK 112


>gi|265984485|ref|ZP_06097220.1| lytic Murein transglycosylase [Brucella sp. 83/13]
 gi|264663077|gb|EEZ33338.1| lytic Murein transglycosylase [Brucella sp. 83/13]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 329 GAPAFDPGTPVPGLTQDQLKELQAKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 386

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 387 ADSWPTQELLDRL 399


>gi|253771853|ref|YP_003034684.1| peptidoglycan-binding protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163251|ref|YP_003046359.1| general secretory pathway component, cryptic [Escherichia coli B
           str. REL606]
 gi|242378850|emb|CAQ33642.1| gspA [Escherichia coli BL21(DE3)]
 gi|253322897|gb|ACT27499.1| Peptidoglycan-binding domain 1 protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975152|gb|ACT40823.1| general secretory pathway component, cryptic [Escherichia coli B
           str. REL606]
 gi|253979308|gb|ACT44978.1| general secretory pathway component, cryptic [Escherichia coli
           BL21(DE3)]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|254038484|ref|ZP_04872540.1| general secretory pathway component [Escherichia sp. 1_1_43]
 gi|226838990|gb|EEH71013.1| general secretory pathway component [Escherichia sp. 1_1_43]
 gi|315617000|gb|EFU97612.1| putative peptidoglycan binding domain protein [Escherichia coli
           3431]
          Length = 478

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 381 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 438

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 439 KTDGVVGFSTL 449


>gi|157162797|ref|YP_001460115.1| putative general secretory pathway protein A [Escherichia coli HS]
 gi|170018441|ref|YP_001723395.1| peptidoglycan binding domain-containing protein [Escherichia coli
           ATCC 8739]
 gi|157068477|gb|ABV07732.1| putative general secretory pathway protein A [Escherichia coli HS]
 gi|169753369|gb|ACA76068.1| Peptidoglycan-binding domain 1 protein [Escherichia coli ATCC 8739]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|118589352|ref|ZP_01546758.1| hypothetical protein SIAM614_07403 [Stappia aggregata IAM 12614]
 gi|118438052|gb|EAV44687.1| hypothetical protein SIAM614_07403 [Stappia aggregata IAM 12614]
          Length = 1363

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 106  NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++  V+  +++L   G    +            SA++ FQ   G+  +G VDS  L+ +
Sbjct: 1301 DNTAMVKEAQDKLNYLGF--DTGTPDGQMGPRTRSAIRAFQRSLGMPETGEVDSRLLDEL 1358

Query: 166  NVPV 169
                
Sbjct: 1359 KSQA 1362


>gi|16131202|ref|NP_417782.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89110687|ref|AP_004467.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. W3110]
 gi|170082842|ref|YP_001732162.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188496286|ref|ZP_03003556.1| putative general secretory pathway protein A [Escherichia coli
           53638]
 gi|194439974|ref|ZP_03072033.1| putative general secretory pathway protein A [Escherichia coli
           101-1]
 gi|238902414|ref|YP_002928210.1| general secretory pathway component, cryptic [Escherichia coli
           BW2952]
 gi|256025949|ref|ZP_05439814.1| general secretory pathway component, cryptic [Escherichia sp.
           4_1_40B]
 gi|300903571|ref|ZP_07121493.1| hypothetical protein HMPREF9536_01700 [Escherichia coli MS 84-1]
 gi|300918296|ref|ZP_07134900.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300946545|ref|ZP_07160810.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300954738|ref|ZP_07167171.1| hypothetical protein HMPREF9547_00663 [Escherichia coli MS 175-1]
 gi|301021127|ref|ZP_07185167.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|301305532|ref|ZP_07211624.1| hypothetical protein HMPREF9347_04153 [Escherichia coli MS 124-1]
 gi|301643857|ref|ZP_07243888.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|307140006|ref|ZP_07499362.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
 gi|331644019|ref|ZP_08345148.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
 gi|1170044|sp|P45756|GSPA_ECOLI RecName: Full=Probable general secretion pathway protein A
 gi|606257|gb|AAA58120.1| ORF_f489 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789720|gb|AAC76348.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. MG1655]
 gi|85676718|dbj|BAE77968.1| general secretory pathway component, cryptic [Escherichia coli str.
           K12 substr. W3110]
 gi|169890677|gb|ACB04384.1| general secretory pathway component, cryptic [Escherichia coli str.
           K-12 substr. DH10B]
 gi|188491485|gb|EDU66588.1| putative general secretory pathway protein A [Escherichia coli
           53638]
 gi|194421082|gb|EDX37110.1| putative general secretory pathway protein A [Escherichia coli
           101-1]
 gi|238861289|gb|ACR63287.1| general secretory pathway component, cryptic [Escherichia coli
           BW2952]
 gi|260447658|gb|ACX38080.1| Peptidoglycan-binding domain 1 protein [Escherichia coli DH1]
 gi|299881657|gb|EFI89868.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|300318289|gb|EFJ68073.1| hypothetical protein HMPREF9547_00663 [Escherichia coli MS 175-1]
 gi|300404444|gb|EFJ87982.1| hypothetical protein HMPREF9536_01700 [Escherichia coli MS 84-1]
 gi|300414557|gb|EFJ97867.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300453791|gb|EFK17411.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300839227|gb|EFK66987.1| hypothetical protein HMPREF9347_04153 [Escherichia coli MS 124-1]
 gi|301077760|gb|EFK92566.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|309703735|emb|CBJ03076.1| general secretory pathway component, GspA [Escherichia coli ETEC
           H10407]
 gi|315137898|dbj|BAJ45057.1| general secretory pathway component, cryptic [Escherichia coli DH1]
 gi|315255906|gb|EFU35874.1| general secretory pathway component, cryptic [Escherichia coli MS
           85-1]
 gi|323959526|gb|EGB55179.1| gspA protein [Escherichia coli H489]
 gi|323970127|gb|EGB65401.1| gspA protein [Escherichia coli TA007]
 gi|331036313|gb|EGI08539.1| general secretory pathway component, cryptic [Escherichia coli
           H736]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITRDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|310817139|ref|YP_003965103.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Ketogulonicigenium vulgare Y25]
 gi|308755874|gb|ADO43803.1| ErfK/YbiS/YcfS/YnhG family protein/Tat domain protein
           [Ketogulonicigenium vulgare Y25]
          Length = 201

 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 51/193 (26%), Gaps = 44/193 (22%)

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLR 216
           ++++T     +   ++      ++   +           +      A     ++  +   
Sbjct: 33  MENTTQMEAPISQSVQRNVSAFHMRDWRPYFTDLRNGAILCDLESRAVHFWSQDESIYRL 92

Query: 217 STVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE 276
               V   +  T    +++  +  NP W    S+ +        ++P++           
Sbjct: 93  YPSSVPLDETLTRRGRTQVVEMRENPTWRPTPSMRE--------RNPEW----------- 133

Query: 277 KGKEVFVEEVDWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNV 335
                                     G  +N +    +         +H T +       
Sbjct: 134 --------------------PAVVPGGDPMNPLGVRALYLSWEY-YRIHGTHDTRKIG-- 170

Query: 336 VRFETSGCVRVRN 348
            R  ++GCV + N
Sbjct: 171 -RPSSNGCVGLYN 182


>gi|326779144|ref|ZP_08238409.1| hypothetical protein SACT1_5003 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326659477|gb|EGE44323.1| hypothetical protein SACT1_5003 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 430

 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 42/162 (25%), Gaps = 29/162 (17%)

Query: 33  ASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE--KAIA------- 83
               ++ + E    +V      + A       S     + E   + +  +          
Sbjct: 267 PGADNKYVTELGRMLVERGGKRYYAVGPGPEWSAADRRATEAFQRAQGWQGKEADGLPGP 326

Query: 84  FYQDILSRGGWPELPI----------------RPLHLGNSSVSVQRLRERLIISGDLDPS 127
               +L+ GG  ++P                      G ++  V RL  +L+  G     
Sbjct: 327 HTWRLLATGGGRDIPAAGAGGSPNTAVAFPGRGYFKPGQTNSHVDRLGRQLVKKGYGKHY 386

Query: 128 -KGLSVAFDAYVESAVKLFQMRHG---LDPSGMVDSSTLEAM 165
             G    +       V+ FQ   G       G     T   +
Sbjct: 387 LSGPDPRWTEADRRNVEAFQRAQGWRGGAADGYPGPETWRRL 428


>gi|300785440|ref|YP_003765731.1| peptidoglycan binding domain-containing protein [Amycolatopsis
           mediterranei U32]
 gi|299794954|gb|ADJ45329.1| peptidoglycan binding domain-containing protein [Amycolatopsis
           mediterranei U32]
          Length = 359

 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V+ +   L   G    +     A+     +A+K +Q ++ L+ SG +     +   +
Sbjct: 121 GPDVREVNANLRALGY--RTAPAGDAYTDGTATALKAWQRKNKLEESGALGMG--DVAVL 176

Query: 168 PVDLRIRQ 175
           P ++R+  
Sbjct: 177 PGEVRVDS 184


>gi|254485906|ref|ZP_05099111.1| cation-transporting ATPase PacS [Roseobacter sp. GAI101]
 gi|214042775|gb|EEB83413.1| cation-transporting ATPase PacS [Roseobacter sp. GAI101]
          Length = 716

 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 21/181 (11%)

Query: 110 SVQRLR----ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS-STLEA 164
           +V  +      RL   G L  S        A V+ AV  F     L  S      STL  
Sbjct: 401 AVPAVATAAIARLYAMGFLVKSGTALERL-AEVDIAV--FDKTGTLTLSSSTGKLSTLSD 457

Query: 165 MNVPVDLRIRQLQVN-LMR--IKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIV 221
               V  ++ Q   + + R  +  L    +     +  IP   ++AV +G+      V +
Sbjct: 458 TQASVARKLAQSSHHPMSRALLSVLPPVPLAEVTQMQEIPGFGMQAVLDGQ-----PVRM 512

Query: 222 GRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNI--HMIDEKGK 279
           GR             RI   P   +P + I +     ++   + L+   I   ++   GK
Sbjct: 513 GRGSWLGADFDGLGLRIGDGPAIPLPLTDIPR---PGVKTALEGLRSLGIAPQILSGDGK 569

Query: 280 E 280
            
Sbjct: 570 T 570


>gi|148651983|ref|YP_001279076.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
 gi|148571067|gb|ABQ93126.1| lytic murein transglycosylase [Psychrobacter sp. PRwf-1]
          Length = 445

 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 11/84 (13%)

Query: 86  QDILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           + I  + G    WP    +PL    +S  V+ L++RL  +G    +KG+         +A
Sbjct: 367 RAINGQPGIQKAWPRY-EQPL----TSAQVRNLQQRLTSAGY--DTKGIDGIMGTNTRNA 419

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
              +Q  +G    G V   +  A+
Sbjct: 420 FAKWQAANGQTADGFVTQRSASAL 443


>gi|291613141|ref|YP_003523298.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291583253|gb|ADE10911.1| ErfK/YbiS/YcfS/YnhG family protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 388

 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +  +  ++H TP P  F+   R  ++GCV + N
Sbjct: 213 HDGHGIWLHGTP-PDTFSRPPRA-SNGCVVLAN 243


>gi|149523997|ref|XP_001512754.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 558

 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDL-DPSKGLSVAFDA-YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G L  P +     F    +  A++ FQ    L  +G +D  T   M  P
Sbjct: 29  LIQYGYLQPPLEETDGQFGEAEMAEALRSFQEASELPVTGWLDRETKTRMAQP 81


>gi|82494640|gb|ABB79949.1| translycolase-related protein [uncultured bacterium pES01019D12]
          Length = 409

 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 72  KETIAQTEKAIAFYQDILSRGGWPELPIRP-LHLGNSSVSVQRLRERLIISGDLDPSKGL 130
            E  A +   +A    I   G     P    L L  S+  V +L+E L   G    +   
Sbjct: 314 SEYYALSVGRLA--DRIAGAGKLRNTPPDADLKL--SNGLVLQLQENLNTLGY--DAGEP 367

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
                    SAV  +Q   G+   G +D++ LEA++  V 
Sbjct: 368 DGVPGPMTRSAVSRYQQSKGVIADGYLDATILEAIDKDVS 407


>gi|271965761|ref|YP_003339957.1| peptidoglycan binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270508936|gb|ACZ87214.1| peptidoglycan binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 568

 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
            G     V++L++ L   G       ++  FD    +AV  F
Sbjct: 128 PGTRGDDVRQLQKALRRLG---HRAPVTGVFDQATIAAVSRF 166


>gi|213586043|ref|ZP_03367869.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 53

 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 5/43 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
             +H T  P          +SGC+R+       L   +   TP
Sbjct: 6   YLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 45


>gi|304392266|ref|ZP_07374208.1| N-acetylmuramoyl-L-alanine amidase AmiD [Ahrensia sp. R2A130]
 gi|303296495|gb|EFL90853.1| N-acetylmuramoyl-L-alanine amidase AmiD [Ahrensia sp. R2A130]
          Length = 260

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSS 160
           L  G++   VQ L+  L + G           FD      V+ FQ         G+ D +
Sbjct: 183 LQEGDAGDPVQALQGMLELYGY---GLECGGNFDRKTRDVVEAFQRHFRPKRVDGVADIA 239

Query: 161 TLE 163
           T+ 
Sbjct: 240 TIA 242


>gi|294663733|ref|ZP_06729286.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292606403|gb|EFF49595.1| type III secretion system hopAJ-like protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 218

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 2/64 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             NS+  +  L++RL   G      G+     A     ++ FQ    L   G   +S L 
Sbjct: 156 PLNSTAQITELQQRLTDKGF--DVGGIDGVLGARTRQGIRAFQRSQQLPQDGYASTSLLA 213

Query: 164 AMNV 167
            +  
Sbjct: 214 RLRA 217


>gi|254694130|ref|ZP_05155958.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 3
           str. Tulya]
          Length = 410

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|196228036|ref|ZP_03126903.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196227439|gb|EDY21942.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 345

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTP 361
              Y+H T E           + GC+R+R  +++++      DTP
Sbjct: 134 RGIYIHGTTEEEKLGKP---VSYGCIRMRSKDVLEVFDDAAIDTP 175


>gi|328882661|emb|CCA55900.1| hypothetical protein SVEN_2614 [Streptomyces venezuelae ATCC 10712]
          Length = 464

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 4/70 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
                G S+  V++L ++L+  G     L          D     A +  Q   G    G
Sbjct: 393 GSFRPGQSNAYVEKLGKQLVKRGFGKHYLSGPGPRWTEADRRNVEAFQRAQGWRGAAADG 452

Query: 156 MVDSSTLEAM 165
                T   +
Sbjct: 453 YPGPETWRRL 462


>gi|254511690|ref|ZP_05123757.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
 gi|221535401|gb|EEE38389.1| peptidoglycan binding domain protein [Rhodobacteraceae bacterium
           KLH11]
          Length = 344

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +    + L+ RL  +G    ++G         E+A+  +Q  +GL  +G
Sbjct: 284 GLTLQDRKELQRRLTSTGY--DTQGADGVIGKNTEAAISAYQQANGLAVTG 332


>gi|218531528|ref|YP_002422344.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
 gi|218523831|gb|ACK84416.1| lytic murein transglycosylase [Methylobacterium chloromethanicum
           CM4]
          Length = 393

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 7/81 (8%)

Query: 89  LSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
                WP    R   LG     ++RL+  L   G               +  AV+ +Q+R
Sbjct: 320 ALAAPWPNGAARLDGLG-----LKRLQAGLAAQGLYAGE--QDGRAGPKLREAVRQYQIR 372

Query: 149 HGLDPSGMVDSSTLEAMNVPV 169
            GL   G    + LE +    
Sbjct: 373 EGLPADGYARPALLERLEGRP 393


>gi|99082831|ref|YP_614985.1| lytic murein transglycosylase [Ruegeria sp. TM1040]
 gi|99039111|gb|ABF65723.1| Lytic murein transglycosylase [Ruegeria sp. TM1040]
          Length = 455

 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + L+ERL  +G    ++G+         +AV+ +Q   GL P G
Sbjct: 403 KELQERLTRAGF--STEGIDGRIGPKTIAAVRAYQSAKGLMPDG 444


>gi|261214431|ref|ZP_05928712.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
 gi|260916038|gb|EEX82899.1| lytic Murein transglycosylase [Brucella abortus bv. 3 str. Tulya]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 329 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 386

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 387 ADSWPTQELLDRL 399


>gi|221369246|ref|YP_002520342.1| Membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides KD131]
 gi|221162298|gb|ACM03269.1| Membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides KD131]
          Length = 413

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +    Q L+ RL  +G    + G      +  E+A+  ++  +GL  +G
Sbjct: 353 GMTKADRQELQRRLTSAGY--DTGGTDGVVGSKTEAAISAYEAANGLPVTG 401


>gi|170725529|ref|YP_001759555.1| peptidoglycan-binding domain-containing protein [Shewanella woodyi
           ATCC 51908]
 gi|169810876|gb|ACA85460.1| Peptidoglycan-binding domain 1 protein [Shewanella woodyi ATCC
           51908]
          Length = 538

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             FD  +E  +K FQ +HGL    +  S TL  +N
Sbjct: 487 SRFDIQLEEQLKRFQRKHGLRADAIAGSQTLVQLN 521


>gi|298292132|ref|YP_003694071.1| lytic murein transglycosylase [Starkeya novella DSM 506]
 gi|296928643|gb|ADH89452.1| lytic murein transglycosylase [Starkeya novella DSM 506]
          Length = 415

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +Q ++ RL  +G    + G           AV  FQ R G++P G      L A+ 
Sbjct: 358 EIQEVQRRLTRAGL--DTGGTDGRVGNMTMRAVANFQRRMGVEPDGYAGLDVLAALR 412


>gi|237815846|ref|ZP_04594843.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
 gi|237789144|gb|EEP63355.1| lytic murein transglycosylase [Brucella abortus str. 2308 A]
          Length = 413

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 343 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 400

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 401 ADSWPTQELLDRL 413


>gi|225852929|ref|YP_002733162.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
 gi|225641294|gb|ACO01208.1| lytic murein transglycosylase [Brucella melitensis ATCC 23457]
          Length = 413

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 343 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 400

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 401 ADSWPTQELLDRL 413


>gi|218283137|ref|ZP_03489216.1| hypothetical protein EUBIFOR_01802 [Eubacterium biforme DSM 3989]
 gi|218216086|gb|EEC89624.1| hypothetical protein EUBIFOR_01802 [Eubacterium biforme DSM 3989]
          Length = 471

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
             + + L+  L   G           F       +  FQ  HGL+ +G  D +T +
Sbjct: 389 DDNAKALQVYLQYLGY--NVDRTDTYFSNTSSQGLANFQQDHGLEVTGDCDKTTWD 442


>gi|126464704|ref|YP_001045817.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17029]
 gi|126106515|gb|ABN79045.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17029]
          Length = 413

 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +    Q L+ RL  +G    + G      +  E+A+  ++  +GL  +G
Sbjct: 353 GMTKADRQELQRRLTSAGY--DTGGTDGVVGSKTEAAISAYEAANGLPVTG 401


>gi|223982972|ref|ZP_03633183.1| hypothetical protein HOLDEFILI_00462 [Holdemania filiformis DSM
           12042]
 gi|223965080|gb|EEF69381.1| hypothetical protein HOLDEFILI_00462 [Holdemania filiformis DSM
           12042]
          Length = 263

 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GG    P   L  G+       L++ L   G    ++ L   F     +A+  +Q  +GL
Sbjct: 182 GGTSGFP--TLREGSVGCYTLVLQDALNALGY--STRWLDGKFGNATRTALIQYQRDNGL 237

Query: 152 DPSGMV----DSSTLEAMNVPVDLR 172
              G+      +++    +V  +LR
Sbjct: 238 GADGIAAARPGNASRRKSSVSGELR 262


>gi|148690305|gb|EDL22252.1| matrix metallopeptidase 25 [Mus musculus]
          Length = 562

 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+  +         ++ A+K+ Q   GL  +G +D  T++ M  P
Sbjct: 38  LTRYGYLPPADPVHAQMQSLEKLQDAIKVMQRFAGLPETGQMDPMTIKTMRKP 90


>gi|75677470|ref|NP_001028511.1| matrix metalloproteinase-25 precursor [Mus musculus]
 gi|123796969|sp|Q3U435|MMP25_MOUSE RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; Flags:
           Precursor
 gi|74181785|dbj|BAE32600.1| unnamed protein product [Mus musculus]
 gi|109730167|gb|AAI12380.1| Matrix metallopeptidase 25 [Mus musculus]
          Length = 615

 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+  +         ++ A+K+ Q   GL  +G +D  T++ M  P
Sbjct: 91  LTRYGYLPPADPVHAQMQSLEKLQDAIKVMQRFAGLPETGQMDPMTIKTMRKP 143


>gi|92118253|ref|YP_577982.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
 gi|91801147|gb|ABE63522.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter hamburgensis X14]
          Length = 269

 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 20/97 (20%)

Query: 316 YSRNNTY-------MHDTPEPILFNNVVRFETSGCVRVRNII-----DLD--VWLLKDTP 361
              ++ +       +H T             + GCVR+          L     +L  T 
Sbjct: 81  PMPHSIFFTKVGHAIHGTFSEGSLGVP---VSHGCVRLSRAHASTLYALVQKEGVLNTTV 137

Query: 362 ---TWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISA 395
                SR  +    + ++ T V      P +  Y +A
Sbjct: 138 TLTGSSRVALARNPRGKRKTDVARRDPAPGYQSYDTA 174


>gi|256263591|ref|ZP_05466123.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
 gi|263093640|gb|EEZ17645.1| lytic Murein transglycosylase [Brucella melitensis bv. 2 str. 63/9]
          Length = 410

 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|239832326|ref|ZP_04680655.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
 gi|239824593|gb|EEQ96161.1| lytic murein transglycosylase [Ochrobactrum intermedium LMG 3301]
          Length = 411

 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 341 GAPAFDPGNPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRAEQLRLGMP 398

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 399 ADSWPTQELLDKL 411


>gi|254504789|ref|ZP_05116940.1| lytic murein transglycosylase subfamily [Labrenzia alexandrii
           DFL-11]
 gi|222440860|gb|EEE47539.1| lytic murein transglycosylase subfamily [Labrenzia alexandrii
           DFL-11]
          Length = 398

 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   +++L+ +L   G       +     A   +AV+  Q + G+ 
Sbjct: 328 GAPRYDAGNPDPGLNDAQMKQLQTKLSALGY--DVGKIDGILGAGTRNAVQQVQQQLGMP 385

Query: 153 PSGMVDSSTLEAM 165
                  + L  +
Sbjct: 386 ADAWPTPALLNRL 398


>gi|157786912|ref|NP_001099395.1| matrix metalloproteinase-17 [Rattus norvegicus]
 gi|149063179|gb|EDM13502.1| matrix metallopeptidase 17 (predicted) [Rattus norvegicus]
          Length = 587

 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 32/147 (21%)

Query: 87  DILSRGG--WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAV 142
            + + GG   P      L LG            L   G L P+   +        +  A+
Sbjct: 31  ALAAHGGCAAPAPRAEDLSLGVEW---------LSKFGYLPPADPATGQLQTQEELSKAI 81

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVP-----------VDLRIRQLQVNL--------MRI 183
              Q   GL+ +G++D +TL  M  P              R RQ  +           R+
Sbjct: 82  TAMQQFGGLETTGILDEATLALMKTPRCSLPDLPLGAQSRRRRQTPLPTKWSKRNLSWRV 141

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVEN 210
           +         R  +  +   +L+   +
Sbjct: 142 RTFPRDSPLGRDTVRALMYYALKVWSD 168


>gi|218681755|ref|ZP_03529530.1| Peptidoglycan-binding domain 1 protein [Rhizobium etli CIAT 894]
          Length = 225

 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +++ ++  L  +G    +        A   +A+K FQ   G +P G V  +T++A+
Sbjct: 161 AIRNIQAILNNNGF--DAGAPDGEMGAKTVTAIKSFQKSIGQEPDGKVTDATVKAL 214


>gi|220923540|ref|YP_002498842.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
 gi|219948147|gb|ACL58539.1| ErfK/YbiS/YcfS/YnhG family protein [Methylobacterium nodulans ORS
           2060]
          Length = 211

 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 12/101 (11%)

Query: 274 IDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTY-------MHDT 326
           +D + + V+         E P+  FR    + +  +    +     + +       +H T
Sbjct: 41  VDGRQRYVWPVSTGMAGYETPSGSFRPFRMERDHFSKEWDDAPMPYSVFFTPVGHAIHGT 100

Query: 327 PEPILFNNVVRFETSGCV--RVRNIIDLDVWLLKDTPTWSR 365
                     R  + GCV  RVRN   L   +  +  + +R
Sbjct: 101 SHVRQIG---RPASHGCVRLRVRNAATLFSLVRAEGLSNTR 138


>gi|159044413|ref|YP_001533207.1| putative membrane-bound lytic murein transglycosylase
           [Dinoroseobacter shibae DFL 12]
 gi|157912173|gb|ABV93606.1| putative membrane-bound lytic murein transglycosylase
           [Dinoroseobacter shibae DFL 12]
          Length = 370

 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 2/83 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              + ++ GG    P  P   G +      L+E L  +G    + G         E+A++
Sbjct: 290 HLSERIAGGGPLRTPFPPDANGLTKADRVTLQEGLTRAGF--DTGGADGVVGPNTEAAIR 347

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            +Q   GL  +G+     + A+ 
Sbjct: 348 AYQRARGLPVTGVPSMEMVRAVR 370


>gi|113970604|ref|YP_734397.1| lytic murein transglycosylase [Shewanella sp. MR-4]
 gi|113885288|gb|ABI39340.1| lytic murein transglycosylase [Shewanella sp. MR-4]
          Length = 424

 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   +++L+ +L  SG                 + ++ FQ    
Sbjct: 348 NGGEPLKVAPPEQPRLSREQIKQLQTKLNESGF--DVGKPDGVLGRNSSAGIQAFQRSKN 405

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 406 MIADGFPSPEVFSALGIS 423


>gi|117920902|ref|YP_870094.1| lytic murein transglycosylase [Shewanella sp. ANA-3]
 gi|117613234|gb|ABK48688.1| lytic murein transglycosylase [Shewanella sp. ANA-3]
          Length = 430

 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   +++L+ +L  SG                 + ++ FQ    
Sbjct: 354 NGGEPLKVAPPEQPRLSREQIKQLQTKLNESGF--DVGKPDGVLGRNSSAGIQAFQRSKN 411

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 412 MIADGFPSPEVFSALGIS 429


>gi|323454425|gb|EGB10295.1| hypothetical protein AURANDRAFT_62829 [Aureococcus anophagefferens]
          Length = 749

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 8/62 (12%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDS 159
           + +  G++      +   L + G    +      F A V   V+  Q   GL   G+V  
Sbjct: 511 KSVKEGDADDDAAEV---LKLLGKEPGAG-----FTAEVSDEVRKIQRAAGLVDDGVVGP 562

Query: 160 ST 161
            T
Sbjct: 563 KT 564


>gi|254710487|ref|ZP_05172298.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           B2/94]
 gi|256369864|ref|YP_003107375.1| lytic murein transglycosylase [Brucella microti CCM 4915]
 gi|260169117|ref|ZP_05755928.1| lytic murein transglycosylase [Brucella sp. F5/99]
 gi|261325511|ref|ZP_05964708.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
 gi|261758626|ref|ZP_06002335.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|265989092|ref|ZP_06101649.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|294852773|ref|ZP_06793446.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
 gi|256000027|gb|ACU48426.1| lytic murein transglycosylase [Brucella microti CCM 4915]
 gi|261301491|gb|EEY04988.1| lytic Murein transglycosylase [Brucella neotomae 5K33]
 gi|261738610|gb|EEY26606.1| lytic Murein transglycosylase [Brucella sp. F5/99]
 gi|264661289|gb|EEZ31550.1| lytic Murein transglycosylase [Brucella pinnipedialis M292/94/1]
 gi|294821362|gb|EFG38361.1| peptidoglycan binding domain-containing protein [Brucella sp. NVSL
           07-0026]
          Length = 410

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|225627895|ref|ZP_03785931.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
 gi|225617058|gb|EEH14104.1| lytic murein transglycosylase [Brucella ceti str. Cudo]
          Length = 413

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 343 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 400

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 401 ADSWPTQELLDRL 413


>gi|218661838|ref|ZP_03517768.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli IE4771]
          Length = 318

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V  ++++L+  G    +            +A+  FQ   G+  +G      L A+
Sbjct: 142 QPSELVMGIQQQLVRRGLY--NGIPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAAL 199

Query: 166 NVPVD 170
                
Sbjct: 200 KTDAA 204


>gi|62290341|ref|YP_222134.1| transglycolase [Brucella abortus bv. 1 str. 9-941]
 gi|82700264|ref|YP_414838.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189024572|ref|YP_001935340.1| peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|254689640|ref|ZP_05152894.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 6
           str. 870]
 gi|254730671|ref|ZP_05189249.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 4
           str. 292]
 gi|256045076|ref|ZP_05447977.1| Putative peptidoglycan binding domain 1 [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256114005|ref|ZP_05454782.1| Putative peptidoglycan binding domain 1 [Brucella melitensis bv. 3
           str. Ether]
 gi|260546881|ref|ZP_05822620.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260565325|ref|ZP_05835809.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|260884183|ref|ZP_05895797.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|265991505|ref|ZP_06104062.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265995343|ref|ZP_06107900.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|297248727|ref|ZP_06932445.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|62196473|gb|AAX74773.1| hypothetical transglycolase [Brucella abortus bv. 1 str. 9-941]
 gi|82616365|emb|CAJ11422.1| Putative peptidoglycan binding domain 1 [Brucella melitensis biovar
           Abortus 2308]
 gi|189020144|gb|ACD72866.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|260095931|gb|EEW79808.1| lytic murein transglycosylase [Brucella abortus NCTC 8038]
 gi|260151393|gb|EEW86487.1| lytic murein transglycosylase [Brucella melitensis bv. 1 str. 16M]
 gi|260873711|gb|EEX80780.1| lytic Murein transglycosylase [Brucella abortus bv. 9 str. C68]
 gi|262766456|gb|EEZ12245.1| lytic Murein transglycosylase [Brucella melitensis bv. 3 str.
           Ether]
 gi|263002289|gb|EEZ14864.1| lytic Murein transglycosylase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|297175896|gb|EFH35243.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 5 str. B3196]
 gi|326409471|gb|ADZ66536.1| Putative peptidoglycan binding domain 1 [Brucella melitensis M28]
 gi|326539178|gb|ADZ87393.1| lytic murein transglycosylase [Brucella melitensis M5-90]
          Length = 410

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 340 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 397

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 398 ADSWPTQELLDRL 410


>gi|291222645|ref|XP_002731327.1| PREDICTED: GK21871-like [Saccoglossus kowalevskii]
          Length = 535

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P++      D  V  A+K FQ    L  +G++D  T   M +P
Sbjct: 27  LKKYGYLSPNRVKFG--DMEVTQAIKNFQRMTNLKVTGLMDERTKAGMQMP 75


>gi|260755169|ref|ZP_05867517.1| lytic Murein transglycosylase [Brucella abortus bv. 6 str. 870]
 gi|260758388|ref|ZP_05870736.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260762214|ref|ZP_05874557.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260668706|gb|EEX55646.1| lytic Murein transglycosylase [Brucella abortus bv. 4 str. 292]
 gi|260672646|gb|EEX59467.1| lytic Murein transglycosylase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675277|gb|EEX62098.1| lytic Murein transglycosylase [Brucella abortus bv. 6 str. 870]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 329 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 386

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 387 ADSWPTQELLDRL 399


>gi|190890966|ref|YP_001977508.1| peptidoglycan binding (cell wall degradation) protein [Rhizobium
           etli CIAT 652]
 gi|218516730|ref|ZP_03513570.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli 8C-3]
 gi|190696245|gb|ACE90330.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli CIAT 652]
          Length = 318

 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 2/62 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  ++++L+  G    +            +A+  FQ   G+  +G      L A+     
Sbjct: 147 VMGIQQQLVRRGLY--NGIPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAALKTDAA 204

Query: 171 LR 172
            R
Sbjct: 205 GR 206


>gi|255083761|ref|XP_002508455.1| predicted protein [Micromonas sp. RCC299]
 gi|226523732|gb|ACO69713.1| predicted protein [Micromonas sp. RCC299]
          Length = 1690

 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           LP+R + LG++   V  L+E              +  +D      +  +Q  + L  SG 
Sbjct: 95  LPMRDMGLGDAGTDVGMLQE--------AFGLPATGVYDKNTSRKIAQWQAANNLPRSGY 146

Query: 157 VDSSTLEAMNVPVDLRIRQLQVNLM 181
             +++ E       +++R++ V   
Sbjct: 147 FGAASREVFARSAQMQMRRVVVTSE 171


>gi|108757031|ref|YP_634502.1| hypothetical protein MXAN_6377 [Myxococcus xanthus DK 1622]
 gi|108460911|gb|ABF86096.1| hypothetical protein MXAN_6377 [Myxococcus xanthus DK 1622]
          Length = 352

 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 92  GGWPELPIRPLHLGNSSV--SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           G  P+     L LG+     +   L++RL   G     +  S         A++  Q+ +
Sbjct: 272 GTGPDRETYQLELGHVDPLGTFPGLQDRLANLGYFSCCEQDSEHH-PVTRQALERLQLAY 330

Query: 150 GLDPSGMVDSSTLEAMNV 167
           GL P+G +D ++ E +  
Sbjct: 331 GLKPTGKLDGASRELLKA 348


>gi|113477754|ref|YP_723815.1| peptidoglycan binding domain-containing protein [Trichodesmium
           erythraeum IMS101]
 gi|110168802|gb|ABG53342.1| Peptidoglycan-binding domain 1 [Trichodesmium erythraeum IMS101]
          Length = 342

 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 18/156 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE-------AM 165
            ++  LI    L+P   +   F     +A+  FQ+      +G +   T++       A 
Sbjct: 27  EIQAILIDLNMLNP--PIDGIFGPLTTAALHRFQVEQKSGEAGYLGEKTIKKLWDAKEAN 84

Query: 166 NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
                + +R  +  +++++ LL  ++              E +    V     V   R  
Sbjct: 85  IFAAPIILRTTKETILKLRPLLSSQLSDSEKHQMSAHQEFELLAYTPVRNHFRVAF-RNY 143

Query: 226 RQTPILHSRINRIMFNPYWV--------IPRSIIQK 253
           +   +    ++      Y           P SI  K
Sbjct: 144 KYNGLGVWYVDEKKVEIYENNQVVHPKLKPESIKIK 179


>gi|256425043|ref|YP_003125696.1| peptidoglycan-binding domain 1 protein [Chitinophaga pinensis DSM
           2588]
 gi|256039951|gb|ACU63495.1| Peptidoglycan-binding domain 1 protein [Chitinophaga pinensis DSM
           2588]
          Length = 260

 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 128 KGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
                 F   V+ A   FQ +H L P G+V + T 
Sbjct: 31  GEADGVFSREVQQATITFQQKHNLQPDGVVGNKTY 65


>gi|149699604|ref|XP_001494346.1| PREDICTED: similar to Matrix metalloproteinase-15 precursor
           (MMP-15) (Membrane-type matrix metalloproteinase 2)
           (MT-MMP 2) (MTMMP2) (Membrane-type-2 matrix
           metalloproteinase) (MT2-MMP) (MT2MMP) (SMCP-2) [Equus
           caballus]
          Length = 652

 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTL 162
           G +S     L+  L + G L           +   + SA+   Q  +G+  +G++D  T 
Sbjct: 22  GMASP----LQNWLRLYGYLPQPSRHMSTLRSAQTLASALAEMQRFYGIPVTGVLDEETK 77

Query: 163 EAMNVP 168
             M  P
Sbjct: 78  AWMKRP 83


>gi|84502809|ref|ZP_01000922.1| Membrane bound lytic murein transglycosylase B [Oceanicola
           batsensis HTCC2597]
 gi|84388792|gb|EAQ01662.1| Membrane bound lytic murein transglycosylase B [Oceanicola
           batsensis HTCC2597]
          Length = 467

 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RGGWP+   R L         Q L+  L  +G    + G+          A++ +Q R G
Sbjct: 398 RGGWPD-GERALKRAER----QELQSLLTRAGY--STGGIDGKIGPNTVRAIRGYQQRVG 450

Query: 151 LDPSG 155
           + P G
Sbjct: 451 MAPDG 455


>gi|306841151|ref|ZP_07473867.1| lytic murein transglycosylase [Brucella sp. BO2]
 gi|306288777|gb|EFM60095.1| lytic murein transglycosylase [Brucella sp. BO2]
          Length = 428

 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P+G      L  +  
Sbjct: 375 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPNGHPSKEVLSVLRR 427


>gi|156717858|ref|NP_001096469.1| matrix metallopeptidase 17 (membrane-inserted) [Xenopus (Silurana)
           tropicalis]
 gi|134024244|gb|AAI36207.1| LOC100125088 protein [Xenopus (Silurana) tropicalis]
          Length = 588

 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+K  Q   GL  +G++D  TLE M  P
Sbjct: 45  LTKFGYLPPPDPVTGQLQTQEELSKAIKAMQEFGGLKATGILDEPTLELMKTP 97


>gi|293605185|ref|ZP_06687574.1| hypothetical protein HMPREF0004_3150 [Achromobacter piechaudii ATCC
           43553]
 gi|292816441|gb|EFF75533.1| hypothetical protein HMPREF0004_3150 [Achromobacter piechaudii ATCC
           43553]
          Length = 254

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD--PSGM 156
            RPL +G     V+ L+ RL   G       L   F       V  FQ        PSG+
Sbjct: 7   SRPLSIGMQGADVEELQLRLA--GF--RGTLLDGEFGPGTTLQVSKFQADFMGKSSPSGV 62

Query: 157 VDSSTLEAMNV 167
            D++T EA++ 
Sbjct: 63  ADTATFEAIDA 73


>gi|261315622|ref|ZP_05954819.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
 gi|261318059|ref|ZP_05957256.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261297282|gb|EEY00779.1| lytic Murein transglycosylase [Brucella pinnipedialis B2/94]
 gi|261304648|gb|EEY08145.1| lytic Murein transglycosylase [Brucella pinnipedialis M163/99/10]
          Length = 399

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 329 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 386

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 387 ADSWPTQELLDRL 399


>gi|238497486|ref|XP_002379978.1| matrix metalloproteinase, putative [Aspergillus flavus NRRL3357]
 gi|220693252|gb|EED49597.1| matrix metalloproteinase, putative [Aspergillus flavus NRRL3357]
          Length = 274

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVE-SAVKLFQMRHGLDP-SGMVDSSTLEAMN 166
           +++R  L   G LD SK     F    + +A++ FQ  +GL   +G  +  T +AM 
Sbjct: 21  KKIRAYLQSLGYLDISKSPDGGFSKAEDYAAIRKFQHFYGLKDVTGSYNEKTRQAMT 77


>gi|114571066|ref|YP_757746.1| lytic murein transglycosylase [Maricaulis maris MCS10]
 gi|114341528|gb|ABI66808.1| lytic murein transglycosylase [Maricaulis maris MCS10]
          Length = 406

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 15/153 (9%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGI---DSDIPIISKETI 75
               GL        A   D+++  +   +                     +        +
Sbjct: 259 WAMRGLRPASGEWQA---DDLMRAARLELPAGGQAPGFLTFPNFRVIKRYNNSTSYAIGV 315

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           A     IA   D    G WPE    PL    +    + ++  L   G    S        
Sbjct: 316 AHLADRIA--GDPALVGPWPE-NNPPLTRSQT----REVQATLNALGF--DSGTPDGLAG 366

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
               +A++ FQ  +G    G +  +  +A+   
Sbjct: 367 PNTRAALRDFQRANGHLADGYLGRAMYDAVLAS 399


>gi|91976974|ref|YP_569633.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisB5]
 gi|91683430|gb|ABE39732.1| Lytic murein transglycosylase [Rhodopseudomonas palustris BisB5]
          Length = 408

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA 164
            +   VQ ++ RL  +G    + G           AV+ +Q R G+    G      L  
Sbjct: 346 MTLAEVQEMQTRLTRAGF--DTGGTDGRVGNDTMKAVRDYQTRAGMQPADGYGGLKLLAR 403

Query: 165 MNVPV 169
           +    
Sbjct: 404 LRQGP 408


>gi|146276693|ref|YP_001166852.1| peptidoglycan binding domain-containing protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145554934|gb|ABP69547.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 589

 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 30/164 (18%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESY----HSIVNDRFDNFLARVDMGIDSDIPIISKET 74
            +  G +  E       +   I          I ++  D  +A     +++  P +  ET
Sbjct: 95  FIADGRNFREAFAAPGQVRPEIEALAVPGPEPIPDE--DAAVATPVAPLEA-APPLPDET 151

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
            A+ +++ A    +  R                    Q L+  L   G       +  AF
Sbjct: 152 PAEAQQSEARL-SLAER--------------------QELQAALQWFGFYA--AAIDGAF 188

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQV 178
            +   +++  +Q   GL+ +G++ +    A+    D    +L +
Sbjct: 189 GSGTRASMAAWQGSQGLEATGVLTARQRAALLDSYDRAQAELGL 232


>gi|114706398|ref|ZP_01439300.1| hypothetical protein FP2506_01400 [Fulvimarina pelagi HTCC2506]
 gi|114538259|gb|EAU41381.1| hypothetical protein FP2506_01400 [Fulvimarina pelagi HTCC2506]
          Length = 547

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 103 HLGNSS---VSVQRL-RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             G+      +V R+ +E L   G    +            +A++ FQ  +GL+ +G + 
Sbjct: 473 EPGSDGTPPQAVVRMAQEALNSLGY--EAGQADGLMGTSTRNAIRAFQADNGLETTGTLS 530

Query: 159 SSTLEAMNVPVD 170
           ++   A+   + 
Sbjct: 531 AAFASALTQAIA 542


>gi|34498927|ref|NP_903142.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472]
 gi|34104776|gb|AAQ61133.1| hypothetical protein CV_3472 [Chromobacterium violaceum ATCC 12472]
          Length = 208

 Score = 39.6 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%), Gaps = 5/50 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                 Y+H   + + +    R  + GCVR++N  +I+L   +   T  W
Sbjct: 157 SYDRAIYIHGAGDHVPWG---RPSSLGCVRMKNRDVIELFDAVPNGTDVW 203


>gi|321462022|gb|EFX73049.1| hypothetical protein DAPPUDRAFT_325673 [Daphnia pulex]
          Length = 465

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 6/77 (7%)

Query: 118 LIISGDLDP---SKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           L   G L P   +   S+    + E AVK FQ   GL+ +G +D  T + M  P      
Sbjct: 29  LASFGYLHPRYKNTSNSIISGYFFELAVKNFQSFFGLNLTGELDEETKKEMRKPRCGHPD 88

Query: 175 QLQ---VNLMRIKKLLE 188
           Q+     +  R + +  
Sbjct: 89  QIIPEDSSTQRKRNINN 105


>gi|296231221|ref|XP_002761064.1| PREDICTED: matrix metalloproteinase-15 [Callithrix jacchus]
          Length = 666

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L               + SA+   Q  +G+  +G++D  T + M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSTQILASALAEMQRFYGIPVTGVLDEETKKWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|182438498|ref|YP_001826217.1| hypothetical protein SGR_4705 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467014|dbj|BAG21534.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 430

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 27/91 (29%), Gaps = 11/91 (12%)

Query: 86  QDI--LSRGGWP----ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAY 137
           +DI     GG P      P       G ++  V RL  +L+  G       G    +   
Sbjct: 338 RDIPAAGAGGSPNTAVAFPGRGYFKPGQTNSHVDRLGRQLVKKGYGKHYLSGPDPRWTEA 397

Query: 138 VESAVKLFQMRHG---LDPSGMVDSSTLEAM 165
               V+ FQ   G       G     T   +
Sbjct: 398 DRRNVEAFQRAQGWRGGAADGYPGPETWRRL 428


>gi|153009055|ref|YP_001370270.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
 gi|151560943|gb|ABS14441.1| lytic murein transglycosylase [Ochrobactrum anthropi ATCC 49188]
          Length = 412

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 1/73 (1%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G  D    +   F      AV+  QMR G+ 
Sbjct: 341 GAPAFDPGNPVPGLTQDQLKELQTKLQARGY-DMGGKIDGVFGLLTRDAVRAEQMRLGMP 399

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 400 ADSWPTQELLDRL 412


>gi|146340910|ref|YP_001205958.1| putative peptidase [Bradyrhizobium sp. ORS278]
 gi|146193716|emb|CAL77733.1| conserved hypothetical protein; putative peptidase (caspase-like)
           [Bradyrhizobium sp. ORS278]
          Length = 488

 Score = 39.6 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 3/75 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++ RL   G       ++  FD      +K +Q   G   +G +     +A+        
Sbjct: 366 VQRRLTGLGF---DTKMTGVFDDETRGVMKRWQAARGFPSTGFLTKLQHKALLAEPQPAP 422

Query: 174 RQLQVNLMRIKKLLE 188
               V      +  +
Sbjct: 423 ATAAVGDEAKPRRPK 437


>gi|319783643|ref|YP_004143119.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169531|gb|ADV13069.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 375

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 8/73 (10%)

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRN---NTYMHDTPEPILFNNVVRFETSGCVRV--RN 348
             +      G  N + +  I  Y      +  +H T  P          ++GC R+   +
Sbjct: 302 GQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHGTIAPQSIGTS---ASNGCFRMINEH 358

Query: 349 IIDLDVWLLKDTP 361
           ++DL   +   T 
Sbjct: 359 VMDLYSRVRVGTK 371


>gi|195430660|ref|XP_002063372.1| GK21871 [Drosophila willistoni]
 gi|194159457|gb|EDW74358.1| GK21871 [Drosophila willistoni]
          Length = 597

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     SA++ FQ   GL+ +G +DS T++ M++P     
Sbjct: 42  LSQFGYLPASARNPESSGLQDKQTWVSAIEEFQSFAGLNITGELDSETMKLMSLPRCGVR 101

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 102 DRVGSADSRSKRYALQGSRWR 122


>gi|320531575|ref|ZP_08032522.1| Tat pathway signal sequence [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320136211|gb|EFW28212.1| Tat pathway signal sequence [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 391

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 95  PELPI-RPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             LP  R    G      +++L   L   G  D        F     SA+  +Q   GL 
Sbjct: 135 GSLPAWRTFEAGMENGEDIRQLETLLQGMGYFDYEP--DNHFSWATTSAIMKWQKDVGLP 192

Query: 153 PSGMV 157
            +G +
Sbjct: 193 QTGTI 197


>gi|297183959|gb|ADI20079.1| membrane-bound lytic murein transglycosylase b [uncultured alpha
           proteobacterium EB080_L06A09]
          Length = 411

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 23/75 (30%), Gaps = 7/75 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP  P   L           L+  L   G                 +A++ FQ+  GL P
Sbjct: 343 WPRGP-GALKFNEK----VELQNLLNQLGYDVGEA--DGIIGPNSIAAIRKFQISVGLIP 395

Query: 154 SGMVDSSTLEAMNVP 168
            GM +   L  M   
Sbjct: 396 DGMSNKDLLLKMRTS 410


>gi|162452358|ref|YP_001614725.1| hypothetical protein sce4082 [Sorangium cellulosum 'So ce 56']
 gi|161162940|emb|CAN94245.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 433

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ RL   G  + +            +AV  FQMR GL  +G  D +T   +
Sbjct: 378 IQGRLKNLGLYEGAVDGGE--GPATHAAVSQFQMRCGLPVTGEADDATRRRL 427


>gi|158300838|ref|XP_320656.4| AGAP011867-PA [Anopheles gambiae str. PEST]
 gi|157013354|gb|EAA00513.4| AGAP011867-PA [Anopheles gambiae str. PEST]
          Length = 100

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++ L+  G L+ S   +        +E AV+  Q   GL  +G VD  TL  M  P
Sbjct: 1   QKYLMQFGYLEKSNIETGNLRTIEELEQAVRSLQRFGGLKETGTVDEETLALMQRP 56


>gi|156389621|ref|XP_001635089.1| predicted protein [Nematostella vectensis]
 gi|156222179|gb|EDO43026.1| predicted protein [Nematostella vectensis]
          Length = 260

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 65/206 (31%), Gaps = 21/206 (10%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-GMVDSSTLEAMN 166
              V  L+  L+ S  +DP    S A+D     AV  FQ  + L+ + G+ D +T   + 
Sbjct: 1   GKDVTILQNLLLRSKYVDPIGT-SGAYDKPTSKAVAQFQQGNKLNSTPGVFDIATASLVL 59

Query: 167 VP------------VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
                               +L + +   +   ++     Y   + P  +     +G + 
Sbjct: 60  KQLMYDGYHDDGTIPKGYKFKLYIPVYADR--TKETNATLYDNQHKPIYTFIVRCHGSMD 117

Query: 215 LR--STVIVGRVDRQTP--ILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNN 270
           L     V     +  TP  ++   +N    N     P  +++               +N 
Sbjct: 118 LETGMAVNQLTTNGNTPTGLMSFDLNSPEPNHKSFGPFPVVRAVEGIKGNAAIGRDAENT 177

Query: 271 IHMIDEKGKEVFVEE-VDWNSPEPPN 295
                  G  +   E  +WN+  P  
Sbjct: 178 FLPYYRDGLLLHTGEWANWNASMPMP 203


>gi|35903119|ref|NP_919397.1| matrix metalloproteinase-14 [Danio rerio]
 gi|32251076|gb|AAP74483.1| membrane-type matrix metalloproteinase 1 alpha [Danio rerio]
 gi|124297207|gb|AAI31865.1| Matrix metalloproteinase 14 (membrane-inserted) alpha [Danio rerio]
          Length = 574

 Score = 39.6 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTL 162
           G S   V+     L   G L P    + A  +   + SA+   Q  +GL  +G +D +TL
Sbjct: 25  GTSDKEVRPEAW-LQQYGYLPPGDVRAQAIRSPKSINSAISAMQKFYGLTVTGTMDPATL 83

Query: 163 EAMNVP----VDLRIRQLQVNLMRIK 184
            AM  P     D    +L+ NL + +
Sbjct: 84  SAMQRPRCGVPDKFGSELKSNLRKKR 109


>gi|304393915|ref|ZP_07375839.1| N-acetylmuramoyl-L-alanine amidase [Ahrensia sp. R2A130]
 gi|303293890|gb|EFL88266.1| N-acetylmuramoyl-L-alanine amidase [Ahrensia sp. R2A130]
          Length = 307

 Score = 39.6 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 29/95 (30%), Gaps = 11/95 (11%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           A   Y D+           +     N     + L+  L  +G   P              
Sbjct: 132 AREQYADLSGA------VAKTSTPPNVDERYRYLQRLLTAAGY--PHGLADGIKGPRTIK 183

Query: 141 AVKLFQMRHGLDPSGMVDSST---LEAMNVPVDLR 172
           A+K +Q   GL  SG  D +T   L  +   V  R
Sbjct: 184 AIKDYQEFMGLPKSGEFDKATVVNLRVIEETVSPR 218


>gi|254720679|ref|ZP_05182490.1| Putative peptidoglycan binding domain 1 [Brucella sp. 83/13]
 gi|265985729|ref|ZP_06098464.1| lytic Murein transglycosylase [Brucella sp. 83/13]
 gi|306839369|ref|ZP_07472185.1| lytic murein transglycosylase [Brucella sp. NF 2653]
 gi|264664321|gb|EEZ34582.1| lytic Murein transglycosylase [Brucella sp. 83/13]
 gi|306405617|gb|EFM61880.1| lytic murein transglycosylase [Brucella sp. NF 2653]
          Length = 412

 Score = 39.6 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D +  +     A   +A++ FQ R+GL+P+G      L  +  
Sbjct: 359 ELQTHLKALGYYDGN--IDGKIGATSRAAIEAFQQRNGLEPNGHPSKEVLSVLRR 411


>gi|114047835|ref|YP_738385.1| lytic murein transglycosylase [Shewanella sp. MR-7]
 gi|113889277|gb|ABI43328.1| lytic murein transglycosylase [Shewanella sp. MR-7]
          Length = 424

 Score = 39.6 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   +++L+ +L  SG                 + ++ FQ    
Sbjct: 348 NGGEPLKVAPPEQPRLSREQIKQLQSKLNESGF--DVGKPDGVLGRNSSAGIQAFQRSKN 405

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 406 MIADGFPSPEVFSALGIS 423


>gi|254697782|ref|ZP_05159610.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 2
           str. 86/8/59]
 gi|256257890|ref|ZP_05463426.1| Putative peptidoglycan binding domain 1 [Brucella abortus bv. 9
           str. C68]
          Length = 372

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 302 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 359

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 360 ADSWPTQELLDRL 372


>gi|114705678|ref|ZP_01438581.1| hypothetical protein FP2506_14469 [Fulvimarina pelagi HTCC2506]
 gi|114538524|gb|EAU41645.1| hypothetical protein FP2506_14469 [Fulvimarina pelagi HTCC2506]
          Length = 955

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  +++RL   G             +   + V  +Q  +GL  +G +D   L  +   
Sbjct: 30  ADIALVQDRLNALGY--DVGSFDGIAGSRTLAGVSRYQTENGLANTGQLDRVLLSHITEK 87

Query: 169 VDL 171
              
Sbjct: 88  TQA 90


>gi|19338606|gb|AAL86723.1|AF416776_1 unknown [Methylobacterium extorquens AM1]
          Length = 56

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 5/34 (14%)

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           +H T EP          +SGC+R+  ++ IDL  
Sbjct: 14  IHGTLEPHSIGKS---VSSGCIRMINQDAIDLFN 44


>gi|6478687|gb|AAF13957.1|AF200549_1 P1 protease [Soybean mosaic virus]
          Length = 292

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 66/209 (31%), Gaps = 28/209 (13%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L   GD+   K          E A++ FQ     D            + V      +  +
Sbjct: 30  LKREGDIQVRKH---------EEALRKFQEAFDHDAD------IQRRLLVNKHSPTQFTK 74

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
            N + +++L  +++  +   +       E   NGK   +    V      T  + S    
Sbjct: 75  KNGLTLRRLTLEQVRAKEAAIARQKQEEEDFLNGKYEQQFYAGV----STTKSMKSEGES 130

Query: 238 IMFNPY-WVI-PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPN 295
           + F    W   P+ I  K  +   R+ P Y+ +  + +  + GK V  E +     +   
Sbjct: 131 VGFRTKYWRPTPKKISNKRAVPQHRK-PTYVLEEVLSLASKNGKLV--EFITEGKGKNVK 187

Query: 296 FIFRQDPGKINAMASTKIEFYSRNNTYMH 324
             + +  G        K         Y+H
Sbjct: 188 VCYVRKHGATLP----KFSLPHEEGKYVH 212


>gi|13470809|ref|NP_102378.1| hypothetical protein mll0608 [Mesorhizobium loti MAFF303099]
 gi|14021552|dbj|BAB48164.1| mll0608 [Mesorhizobium loti MAFF303099]
          Length = 426

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 44/158 (27%), Gaps = 22/158 (13%)

Query: 223 RVDRQTPILHSRINRIMFNPYWVI--PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKE 280
           +  +  P    +           I    S  +  ++       +Y        +  KG  
Sbjct: 268 KPFKVKPEFVPQDVEFTGYEPGTIVIDTSARRLYLVESFSTARRYAIAVGREGLQFKGTV 327

Query: 281 VFVEEVDWNSPEP------------PNFIFRQDPGKINAMASTKIEFYSRN---NTYMHD 325
              ++ +W    P              +      G  N + +  I  Y      +  +H 
Sbjct: 328 AVGDKQEWPRWIPTLDMQKREPKHYGQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRIHG 387

Query: 326 TPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           T  P          ++GC R+   +++DL   +   T 
Sbjct: 388 TIAPQSIGTS---ASNGCFRMINEHVMDLYSRVRVGTK 422


>gi|89070405|ref|ZP_01157707.1| lipoprotein, putative [Oceanicola granulosus HTCC2516]
 gi|89043971|gb|EAR50148.1| lipoprotein, putative [Oceanicola granulosus HTCC2516]
          Length = 182

 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           V  L+  L   G L        A+D   ++AV+ FQ   G   S ++  +T
Sbjct: 112 VTNLQRALQARGALTGPA--DAAYDTRTQAAVQAFQSEIGGPDSPVLARTT 160


>gi|292492868|ref|YP_003528307.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
 gi|291581463|gb|ADE15920.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus halophilus Nc4]
          Length = 162

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 47/161 (29%), Gaps = 27/161 (16%)

Query: 193 LRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHS----RINRIMFNPYWVIPR 248
             Y+ V+     L   +  KV   + V + +      +         ++I        P 
Sbjct: 5   ESYIRVHFLEQRLTLRQGRKVVFETPVSLAKNGPGEEMGSECTPRGWHQIRAKIGAGCPV 64

Query: 249 SIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW-NSPEPPNFIFRQDPGKINA 307
           + + +            L            ++  +  + W +  EP    F    GK++ 
Sbjct: 65  NTVFRGRRPTGEIYTPKLGRAYPE------RDWILTRILWLSGLEPGKNRF----GKVDT 114

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           M             Y+H  P+           + GC+R+ N
Sbjct: 115 MGRY---------IYIHGVPDETAMGIPG---SHGCIRIHN 143


>gi|260461930|ref|ZP_05810175.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium opportunistum
            WSM2075]
 gi|259032177|gb|EEW33443.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium opportunistum
            WSM2075]
          Length = 1344

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +VQ ++  L  +G    + G         ++A+  FQ  + +  +G VD   ++A+
Sbjct: 1287 AVQNIQRILNKNGY--DAGGADGKMGQKTKTAIMAFQTDNKMPATGAVDEKLVKAL 1340


>gi|148254183|ref|YP_001238768.1| hypothetical protein BBta_2723 [Bradyrhizobium sp. BTAi1]
 gi|146406356|gb|ABQ34862.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Bradyrhizobium sp. BTAi1]
          Length = 455

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%), Gaps = 12/67 (17%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N   +H  P P          + GCVR+         L   T  W    +  ++      
Sbjct: 67  NGVALHGGPLPGY------AASHGCVRM--PYGFAEKLFDRT--WIGMRV--IIAPGDVA 114

Query: 379 PVKLATE 385
           PV+ +  
Sbjct: 115 PVEFSHP 121


>gi|126323935|ref|XP_001378518.1| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
           [Monodelphis domestica]
          Length = 589

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 2/76 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P   ++        +  A+   Q   GL+ +G++D +TL+ M  P       
Sbjct: 43  LSRFGYLPPPDPVTGQLQTQEELAKAIAAMQRFGGLEATGVLDEATLQLMKTPRCSLPDL 102

Query: 176 LQVNLMRIKKLLEQKM 191
                 R +       
Sbjct: 103 TVPGTRRKRNTPALTK 118


>gi|86750075|ref|YP_486571.1| lytic murein transglycosylase [Rhodopseudomonas palustris HaA2]
 gi|86573103|gb|ABD07660.1| Lytic murein transglycosylase [Rhodopseudomonas palustris HaA2]
          Length = 408

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 3/65 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEA 164
            +   VQ ++ RL  +G    + G           AV+ +Q R G+    G      L  
Sbjct: 346 MTLAEVQEMQTRLTRAGF--DTGGTDGRVGNDTMKAVRDYQARAGMQPADGYGGLKLLAR 403

Query: 165 MNVPV 169
           +    
Sbjct: 404 LRQGP 408


>gi|46367534|emb|CAG25893.1| serine protease [Soybean mosaic virus]
          Length = 309

 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 17/187 (9%)

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLV 198
           E A++ FQ           D+     + V     I+  + N + ++ L  ++   R    
Sbjct: 59  EEALRKFQEAFDQ------DAGIQRRLLVNKHSSIQSTKKNGLTLRHLTLEQ--ARAKEA 110

Query: 199 NIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY-WVIPRSIIQKDMMA 257
            I     E  E   +  +           T  +      + F    W      I++    
Sbjct: 111 AIARRKQE--EEDFLNGKYEQQFYTGVSTTKSMKFEGGSVGFRTKYWRPTPKKIKERRAP 168

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R  P Y+ +  + +  + GK V  E +     +     + +  G +      K     
Sbjct: 169 PQRTKPTYVLEEVLSIASKSGKLV--EFITGGKGKRAKVCYVRKHGAMLP----KFSLPH 222

Query: 318 RNNTYMH 324
               Y+H
Sbjct: 223 EEGKYIH 229


>gi|261219210|ref|ZP_05933491.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
 gi|261322271|ref|ZP_05961468.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
 gi|260924299|gb|EEX90867.1| lytic Murein transglycosylase [Brucella ceti M13/05/1]
 gi|261294961|gb|EEX98457.1| lytic Murein transglycosylase [Brucella ceti M644/93/1]
          Length = 399

 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 329 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 386

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 387 ADSWPTQELLDRL 399


>gi|224074161|ref|XP_002304280.1| predicted protein [Populus trichocarpa]
 gi|222841712|gb|EEE79259.1| predicted protein [Populus trichocarpa]
          Length = 298

 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLS--VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            L++     G L      +    FD   ES V  +Q   GL  +G +D  T+  + +P
Sbjct: 3   ELKKYFNRFGYLPIPDTNNFTDTFDTQFESVVLAYQTNLGLPETGKLDFDTISMIVLP 60


>gi|158422718|ref|YP_001524010.1| hypothetical protein AZC_1094 [Azorhizobium caulinodans ORS 571]
 gi|158329607|dbj|BAF87092.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 306

 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 6/70 (8%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           P            V  +++ L   G       ++ +       AV+ F+   GL   G +
Sbjct: 236 PGEVARP----NRVLGVQKTLARLGY--GPLKVTGSLSPETRLAVQRFERDRGLPVDGEI 289

Query: 158 DSSTLEAMNV 167
               +  ++ 
Sbjct: 290 TDRLVRELST 299



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 2/59 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           V  ++  L   G  D             E+A++ ++    L  +G    + L  +    
Sbjct: 156 VADVQRELSRRGFYDGPA--DGLTGPKTEAAIRAYEQSARLKVTGTASDALLAQIRRTP 212


>gi|254708118|ref|ZP_05169946.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M163/99/10]
 gi|256031981|ref|ZP_05445595.1| Putative peptidoglycan binding domain 1 [Brucella pinnipedialis
           M292/94/1]
 gi|256061502|ref|ZP_05451646.1| Putative peptidoglycan binding domain 1 [Brucella neotomae 5K33]
          Length = 372

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 302 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 359

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 360 ADSWPTQELLDRL 372


>gi|222149148|ref|YP_002550105.1| N-acetylmuramoyl-L-alanine amidase [Agrobacterium vitis S4]
 gi|221736133|gb|ACM37096.1| N-acetylmuramoyl-L-alanine amidase [Agrobacterium vitis S4]
          Length = 252

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 92  GGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
           G W E            G+    V+ L+  L + G       ++  FDA  E  V+ FQ+
Sbjct: 166 GHWVEPTAITGGRFFQRGDRGQPVEALQSMLSLYGY---PVEINADFDAVTEGVVRSFQL 222

Query: 148 RHG-LDPSGMVDSSTLE 163
                   G+ D ST++
Sbjct: 223 HFRPSKVDGVADYSTID 239


>gi|254476983|ref|ZP_05090369.1| lytic murein transglycosylase [Ruegeria sp. R11]
 gi|214031226|gb|EEB72061.1| lytic murein transglycosylase [Ruegeria sp. R11]
          Length = 464

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            L+ERL  SG    + G+         +A++ +Q+  GL P G
Sbjct: 413 ELQERLSRSGY--DTGGVDGRIGPRTRAALRAYQLAAGLTPDG 453


>gi|149917832|ref|ZP_01906327.1| hypothetical protein PPSIR1_12763 [Plesiocystis pacifica SIR-1]
 gi|149821352|gb|EDM80754.1| hypothetical protein PPSIR1_12763 [Plesiocystis pacifica SIR-1]
          Length = 1350

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 46/151 (30%), Gaps = 12/151 (7%)

Query: 54   NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNS------ 107
                  +    S +   S +  AQ   A A    I++ G + E     L    +      
Sbjct: 950  GSTGSAEARASSGLDAESAQ-WAQLILARADGAGIVADGRFGERSREALRRFQARAGLED 1008

Query: 108  SVSV-QRLRERLII--SGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               V    R  L+    G L P      +   DA    A+  FQ   GLD S   D++T 
Sbjct: 1009 HGRVDAPTRTALVQAGLGYLAPGTEFAPTGTLDARTRDALLRFQADEGLDTSARFDAATR 1068

Query: 163  EAMNVPVDLRIRQLQVNLMRIKKLLEQKMGL 193
              M   +      L     R+  L E     
Sbjct: 1069 AKMLEGLREDWPWLAAQDRRLPGLPELDGPR 1099


>gi|194381846|dbj|BAG64292.1| unnamed protein product [Homo sapiens]
          Length = 305

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|149377682|ref|ZP_01895418.1| Membrane-bound lytic murein transglycosylase B [Marinobacter
           algicola DG893]
 gi|149358035|gb|EDM46521.1| Membrane-bound lytic murein transglycosylase B [Marinobacter
           algicola DG893]
          Length = 398

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
            I   G     P   +    S  ++  L++ L   G    +            SA++ +Q
Sbjct: 310 RIAGAGKLQNPPPEDM-PALSRDNILTLQKALNEQGF--DTGKPDGILGPNTRSAIRGYQ 366

Query: 147 MRHGLDPSGMVDSSTLEAMNV 167
            ++GL   G    + L+A+ V
Sbjct: 367 SKNGLVADGYPGDTVLDALEV 387


>gi|77465241|ref|YP_354744.1| membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides 2.4.1]
 gi|77389659|gb|ABA80843.1| Membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides 2.4.1]
          Length = 462

 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +    Q L+ RL  +G    + G      +  E+A+  ++  +GL  +G
Sbjct: 402 GMTKADRQELQRRLTSAGY--DTGGTDGVVGSKTEAAISAYEAANGLPVTG 450


>gi|254714480|ref|ZP_05176291.1| Putative peptidoglycan binding domain 1 [Brucella ceti M644/93/1]
 gi|254717378|ref|ZP_05179189.1| Putative peptidoglycan binding domain 1 [Brucella ceti M13/05/1]
          Length = 372

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 302 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 359

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 360 ADSWPTQELLDRL 372


>gi|255593471|ref|XP_002535877.1| conserved hypothetical protein [Ricinus communis]
 gi|223521663|gb|EEF26508.1| conserved hypothetical protein [Ricinus communis]
          Length = 197

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
           + +  ++H TP    ++   R  + GCV + N  
Sbjct: 22  NGHGIWLHGTPS-NTYSRPPRA-SDGCVVLTNPD 53


>gi|196233583|ref|ZP_03132425.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196222435|gb|EDY16963.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 166

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 38/164 (23%)

Query: 192 GLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
           G   + V++       + + ++ + S +  GR    TP    ++                
Sbjct: 5   GEYSIEVDLEEQRAYLLFHHRMVMESPICSGRTQYPTPTGTFQV---------------- 48

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMAST 311
                  L +D  +       M+D  G+ V + + D + P PP   F   P         
Sbjct: 49  -------LEKDALHRSSFYGKMVDAAGRTV-LADADADMPVPPGMRFVNAPMP------Y 94

Query: 312 KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            + F +     +H+   P          + GCVR+     +  +
Sbjct: 95  FMRFTN--GVGLHEGYLPGY------PASHGCVRMPKEQAIAFY 130


>gi|166713682|ref|ZP_02244889.1| transglycosylase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 425

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +  L++RL   G      G+     A     ++ FQ    L   G   +S L  +  
Sbjct: 368 AQITELQQRLTDKGF--DVGGIDGVLGAQTRQGIRAFQHSQQLPQDGYASTSLLARLRT 424


>gi|326664684|ref|XP_700781.5| PREDICTED: matrix metalloproteinase-16 [Danio rerio]
          Length = 589

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 118 LIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+     +      + SA+   Q ++GL+ +G ++  T++ M  P      Q
Sbjct: 19  LQKYGYLHPTPPNMAAQRSAQTMHSAIAAMQHKYGLNITGTLNKYTIDWMKKPRCGVPDQ 78

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNI 200
           L+      +K      G ++   +I
Sbjct: 79  LKAGSASRRKKRYALTGQKWQREHI 103


>gi|153011356|ref|YP_001372570.1| peptidoglycan binding domain-containing protein [Ochrobactrum
            anthropi ATCC 49188]
 gi|151563244|gb|ABS16741.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
            49188]
          Length = 1196

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 4/67 (5%)

Query: 99   IRPLHLGNSS--VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
             +PL  G+     +V+ ++  L  +G                 +A+  FQ  +G  P+G 
Sbjct: 1125 SKPLTTGSVDMKKAVRNIQLILQKNGY--DVGTADGLMGGKTRAAIAAFQKANGQTPTGD 1182

Query: 157  VDSSTLE 163
            VD   ++
Sbjct: 1183 VDQQLVQ 1189


>gi|148559504|ref|YP_001259339.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|148370761|gb|ABQ60740.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
          Length = 372

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 302 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 359

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 360 ADSWPTQELLDRL 372


>gi|91788993|ref|YP_549945.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666]
 gi|91698218|gb|ABE45047.1| ErfK/YbiS/YcfS/YnhG [Polaromonas sp. JS666]
          Length = 176

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 321 TYMHDTPEPILFNNVVR-FETSGCVRVRNII--DLDVWLLKDTPTW 363
            Y+H  P+       +    + GCVR+RN    +L   +   T  W
Sbjct: 117 IYIHGCPD----GLPMGEPLSLGCVRMRNADIVELFDLVEPGTEVW 158


>gi|148254487|ref|YP_001239072.1| hypothetical protein BBta_3046 [Bradyrhizobium sp. BTAi1]
 gi|146406660|gb|ABQ35166.1| hypothetical protein BBta_3046 [Bradyrhizobium sp. BTAi1]
          Length = 231

 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 39/143 (27%), Gaps = 9/143 (6%)

Query: 27  VEKPIHASVLDEIINESYHSIVNDRF--DNFLARVDMGIDSDIPIISKETIAQTEKAIAF 84
              P+      E     +   V +    D  +                +  A     +  
Sbjct: 89  NANPLPRPRPTEADLSPFDPKVTETRPPDTRVVEPRPAEQRTADARPDQKYADPLADLVR 148

Query: 85  YQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
                  GG      +P   G ++  V  ++  L   G        +    +  ++A++ 
Sbjct: 149 ----SVSGGQGASRAQP-TPGGNARRVAAVQRALTEYGY--GQLKPTGMIGSETQAAIQK 201

Query: 145 FQMRHGLDPSGMVDSSTLEAMNV 167
           F+    L  +G +    +  + +
Sbjct: 202 FERERKLPVTGQLSDRLVRELAI 224


>gi|290968327|ref|ZP_06559868.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781602|gb|EFD94189.1| NlpC/P60 family protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 227

 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           ++ +L   G    +      +     +AV  FQ +     SG+V + T 
Sbjct: 2   IQRQLRKIGY---NIRDDGRYSPQTAAAVADFQRKRQFAVSGIVGAQTY 47


>gi|257455301|ref|ZP_05620536.1| lytic murein transglycosylase [Enhydrobacter aerosaccus SK60]
 gi|257447263|gb|EEV22271.1| lytic murein transglycosylase [Enhydrobacter aerosaccus SK60]
          Length = 447

 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            V++L++RL   G    +KG         + A + +Q  H   P G +   
Sbjct: 392 EVRQLQQRLTAMGY--DTKGSDGVVGTNTKLAFQRWQADHNQIPDGFISKR 440


>gi|24373558|ref|NP_717601.1| membrane-bound lytic transglycolase-related protein [Shewanella
           oneidensis MR-1]
 gi|24347876|gb|AAN55045.1|AE015642_5 membrane-bound lytic transglycolase-related protein [Shewanella
           oneidensis MR-1]
          Length = 433

 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   +++L+ +L  SG                 + ++ FQ  + 
Sbjct: 357 NGGEPLKVTPPEQPRLSRELIKQLQTKLNESGF--DVGKPDGVLGRNSTAGIQAFQRSNN 414

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 415 MIADGFPSPEVFTALGIS 432


>gi|224370554|ref|YP_002604718.1| hypothetical protein HRM2_34790 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693271|gb|ACN16554.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 328

 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           R R  +   L      +  +D      V+  Q    L P G+V   T +A+N
Sbjct: 39  RARAALLAKLPSE-RQTRTYDTTTFKLVRAIQEERQLRPDGVVGKQTADAVN 89


>gi|18413635|dbj|BAA82707.2| membrane-type-4 matrix metalloproteinase [Homo sapiens]
          Length = 606

 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|297693480|ref|XP_002824046.1| PREDICTED: matrix metalloproteinase-17-like, partial [Pongo abelii]
          Length = 181

 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 2   LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 61

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 62  PVLTQARRRRQAPAP 76


>gi|112382270|ref|NP_057239.4| matrix metalloproteinase-17 preproprotein [Homo sapiens]
 gi|296439485|sp|Q9ULZ9|MMP17_HUMAN RecName: Full=Matrix metalloproteinase-17; Short=MMP-17; AltName:
           Full=Membrane-type matrix metalloproteinase 4;
           Short=MT-MMP 4; Short=MTMMP4; AltName:
           Full=Membrane-type-4 matrix metalloproteinase;
           Short=MT4-MMP; Short=MT4MMP; Flags: Precursor
          Length = 603

 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|311257207|ref|XP_003127010.1| PREDICTED: matrix metalloproteinase-15-like [Sus scrofa]
          Length = 656

 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 38  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 97

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 98  FGVRVKANLRRRR 110


>gi|291415807|ref|XP_002724141.1| PREDICTED: matrix metalloproteinase 17, partial [Oryctolagus
           cuniculus]
          Length = 541

 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 21/114 (18%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 3   LSRFGYLPPADSTTGQLQTQEELSKAITAMQQFGGLETTGILDEATLALMKTPRCSLPDL 62

Query: 169 ----VDLRIRQLQVNL--------MRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
                  R RQ              R++         R  +  +   +L+   +
Sbjct: 63  PPVAQARRRRQAPAPTKWNKRNLSWRVRTFPRDSPLGRDTVRALMYYTLKVWSD 116


>gi|89055359|ref|YP_510810.1| lytic murein transglycosylase [Jannaschia sp. CCS1]
 gi|88864908|gb|ABD55785.1| Lytic murein transglycosylase [Jannaschia sp. CCS1]
          Length = 425

 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L+ERL  +G    +        +  E+A++ +Q  +GL  +G   +S L  + 
Sbjct: 374 ELQERLNSAGY--DAGTPDGVIGSGTEAAIEAYQSANGLPVTGEPSASLLRRLR 425


>gi|262377636|ref|ZP_06070856.1| lytic murein transglycosylase B [Acinetobacter lwoffii SH145]
 gi|262307395|gb|EEY88538.1| lytic murein transglycosylase B [Acinetobacter lwoffii SH145]
          Length = 430

 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ L+  G       +          A++  Q R GL P+G      L 
Sbjct: 361 PGTSRAERREIQQFLLNRGY--DIGAVDGLIGDKTRQAIRQEQQRLGLSPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       R+ Q
Sbjct: 419 AFRNENAKRMMQ 430


>gi|328544946|ref|YP_004305055.1| ErfK/YbiS/YcfS/YnhG family [polymorphum gilvum SL003B-26A1]
 gi|326414688|gb|ADZ71751.1| ErfK/YbiS/YcfS/YnhG family [Polymorphum gilvum SL003B-26A1]
          Length = 413

 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 99  IRPLH----LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             PL       +   +V+ ++  L   G       +          A++LFQ    L  +
Sbjct: 227 GSPLRMIVTPRDGGDTVRTVQRLLDRMGFAP--GPVDGVLGRRTREAIRLFQEGAELPIT 284

Query: 155 GMVDSSTLEAM 165
           G + +  + A+
Sbjct: 285 GNLTAGLVSAL 295


>gi|149201097|ref|ZP_01878072.1| Lytic murein transglycosylase [Roseovarius sp. TM1035]
 gi|149145430|gb|EDM33456.1| Lytic murein transglycosylase [Roseovarius sp. TM1035]
          Length = 427

 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           RG WP     PL    S      ++ RL   G     + +         +A++ FQ   G
Sbjct: 357 RGAWPR-GYNPL----SFDEKMDMQRRLQRKGF--AIEKIDGIIGPNTINAIRAFQQSVG 409

Query: 151 LDPSGMVDSSTLEAMNVP 168
           + P G+     L  +   
Sbjct: 410 VTPDGLPSQELLALLKRS 427


>gi|119713534|gb|ABL97587.1| lytic murein transglycosylase [uncultured marine bacterium
           EB0_35D03]
          Length = 348

 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 5/85 (5%)

Query: 83  AFYQDILSRGGWPELPIRPL-HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           A+  D +  GG  +L  + +     S  +V +++  L + G    +             A
Sbjct: 268 AYLSDRIKGGG--KLSAKSIDEPLLSKENVMQIQNTLNLLGY--DTGTPDGMAGPKTREA 323

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMN 166
            ++FQ   GL   G +    L+ + 
Sbjct: 324 TRMFQSDIGLVADGYIGYELLQVLQ 348


>gi|326331906|ref|ZP_08198193.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950403|gb|EGD42456.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 450

 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W       L  G++  SV+ L+  L  +        ++   D   + A+  +Q R G   
Sbjct: 376 WAANSRPLLKRGSAGESVRDLQRALSAT-SAPERPKITGVLDWNTQVALVAYQKRLGRTA 434

Query: 154 SGMVDSSTL 162
           +GM    T 
Sbjct: 435 NGMATEVTW 443


>gi|54311164|gb|AAH45610.1| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|37589932|gb|AAH40507.2| MMP17 protein [Homo sapiens]
          Length = 606

 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 59  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 118

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 119 PVLTQARRRRQAPAP 133


>gi|222149735|ref|YP_002550692.1| lytic murein transglycosylase [Agrobacterium vitis S4]
 gi|221736717|gb|ACM37680.1| lytic murein transglycosylase [Agrobacterium vitis S4]
          Length = 405

 Score = 39.6 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 14/121 (11%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAF---YQDILSRGG----WPELPIRPLHLGN 106
              A     + +      K+  A    A+A      +I   GG    WP  P   L +  
Sbjct: 291 LAGANGPGFLMTSNFFTIKKYNAADTYALAVGLLADEIAGYGGMQQKWPR-PDGTLDI-- 347

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                  L+ R+   G    +  +   F +  ++A+   Q R G+   G      LE + 
Sbjct: 348 --KEKFELQTRMKALGYY--NGEVDGNFGSGSKAAISAIQQRLGMQGDGEPSKPLLEMLR 403

Query: 167 V 167
            
Sbjct: 404 R 404


>gi|218458840|ref|ZP_03498931.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli Kim 5]
          Length = 236

 Score = 39.6 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V  ++++L+  G    +            +A+  FQ   G+  +G      L A+
Sbjct: 60  QPSELVMGIQQQLVRRGLY--NGIPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAAL 117

Query: 166 NVPVD 170
                
Sbjct: 118 KTDAA 122


>gi|84687917|ref|ZP_01015783.1| Membrane-bound lytic murein transglycosylase B [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84664054|gb|EAQ10552.1| Membrane-bound lytic murein transglycosylase B [Rhodobacterales
           bacterium HTCC2654]
          Length = 439

 Score = 39.6 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +    + ++ RL   G    + G      A  E+A++ F+  +G+  +G    + L  
Sbjct: 375 GLTLDDRKDIQRRLTAKGF--DTDGTDGVIGAKSEAAIRAFEAANGMPSTGQATKALLVK 432

Query: 165 MNVPVDL 171
           +      
Sbjct: 433 LGGRPRA 439


>gi|257462709|ref|ZP_05627117.1| hypothetical protein FuD12_02594 [Fusobacterium sp. D12]
 gi|317060351|ref|ZP_07924836.1| predicted protein [Fusobacterium sp. D12]
 gi|313686027|gb|EFS22862.1| predicted protein [Fusobacterium sp. D12]
          Length = 128

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 13/57 (22%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           + +  RL   G    +             AV+ FQ  +GL P G V  +T+  +   
Sbjct: 83  KEIDRRLSSLGYTGKN-------------AVREFQTDYGLVPDGKVGRNTIRVLKEN 126


>gi|318042393|ref|ZP_07974349.1| hypothetical protein SCB01_11821 [Synechococcus sp. CB0101]
          Length = 127

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 321 TYMHDTPEPILFNNVVR-FETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEE 370
             +H  P             +SGC+R+ +      WL ++TP  +   I+ 
Sbjct: 79  ICLHGAPWQEAAGQRFGVARSSGCIRIPSPH--ARWLFENTPIGTPVTIQA 127


>gi|284046860|ref|YP_003397200.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
 gi|283951081|gb|ADB53825.1| ErfK/YbiS/YcfS/YnhG family protein [Conexibacter woesei DSM 14684]
          Length = 199

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
            +     +H T  P L        + GC+R+RN+    L   L   TP
Sbjct: 151 PAGGFVGIHGTDRPELV---PGRVSHGCIRLRNVDVVRLGRVLAVGTP 195


>gi|148692667|gb|EDL24614.1| matrix metallopeptidase 19, isoform CRA_b [Mus musculus]
          Length = 508

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              + L + L+  G L      +  F    +  A++ FQ   GL  SG +D +T   M  
Sbjct: 5   ADSKDLEDYLLQYGYLQKPLEGADDFRLEDITEALRTFQEASGLPISGQMDDATRARMKQ 64

Query: 168 P 168
           P
Sbjct: 65  P 65


>gi|269126016|ref|YP_003299386.1| peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
 gi|268310974|gb|ACY97348.1| Peptidoglycan-binding domain 1 protein [Thermomonospora curvata DSM
           43183]
          Length = 366

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           ++  L     +  S  +   F +   SAV  +Q   GL   G+V  +T + M+
Sbjct: 266 IQYFLYADNRMSRSS-IDCMFGSQTASAVASWQAARGLAADGIVGPNTRDRMD 317


>gi|196233249|ref|ZP_03132095.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
 gi|196222720|gb|EDY17244.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
          Length = 296

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            LR R I  GD+D            +E A+K +Q R GL  SGM D  TL ++ V
Sbjct: 29  ELRRRNIYFGDIDGRAS------PELEQALKHYQKRKGLAVSGMNDHDTLRSLGV 77


>gi|296118710|ref|ZP_06837286.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295968199|gb|EFG81448.1| secreted lipoprotein ErfK/YbiS/YcfS/YnhG family protein
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 396

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 259 LRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSR 318
           LR  P  L  +        G+ +  +  +        F +  + G    M +   +    
Sbjct: 262 LRSIPVSLGKDGGRWATPNGRYMIGDSHETLLMNSETFGYSIEDGGYKTMVNYATQMSYS 321

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
              Y+H  P   ++       + GC+ V    +   W + +T       ++    T  T 
Sbjct: 322 -GIYVHGAPW-SVWAQGNTNTSHGCINVT--EEAAQWFMNNTKRGDIVEVKNT--TGGT- 374

Query: 379 PVKLATEVPVH 389
                  +PV+
Sbjct: 375 -------LPVY 378


>gi|194207129|ref|XP_001495153.2| PREDICTED: matrix metalloproteinase 14 [Equus caballus]
          Length = 756

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 8/99 (8%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRH 149
           G W     R    G  ++    L   L   G L P      +      + +A+   Q  +
Sbjct: 189 GPWRR-GSRRWRPGCGTLHKALLAW-LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFY 246

Query: 150 GLDPSGMVDSSTLEAMNVP----VDLRIRQLQVNLMRIK 184
           GL  +G  D+ T++AM  P     D    +++ N+ R +
Sbjct: 247 GLQVTGKADADTMKAMRRPRCGVPDKFGAEIKANVRRKR 285


>gi|122891389|emb|CAM14162.1| novel protein similar to vertebrate matrix metallopeptidase 16
           (membrane-inserted) (MMP16) [Danio rerio]
          Length = 580

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 118 LIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+     +      + SA+   Q ++GL+ +G ++  T++ M  P      Q
Sbjct: 5   LQKYGYLHPTPPNMAAQRSAQTMHSAIAAMQHKYGLNITGTLNKYTIDWMKKPRCGVPDQ 64

Query: 176 LQVNLMRIKKLLEQKMGLRYVLVNI 200
           L+      +K      G ++   +I
Sbjct: 65  LKAGSASRRKKRYALTGQKWQREHI 89


>gi|172060521|ref|YP_001808173.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Burkholderia ambifaria MC40-6]
 gi|171993038|gb|ACB63957.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Burkholderia ambifaria MC40-6]
          Length = 289

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 23/79 (29%), Gaps = 10/79 (12%)

Query: 89  LSRGGWPELPIRPLHLGNSSV----SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKL 144
              G WP+       LG+        V+ L+ +L   G            DA        
Sbjct: 189 AGVGAWPDDATVAARLGDRDPHALVDVRELQLKLARYGY---DVPTDGVLDARTRRVFAA 245

Query: 145 FQMRHGLDPS--GMVDSST 161
           FQ  H       G  D+ T
Sbjct: 246 FQ-MHFRPSDYAGNPDAET 263


>gi|323140901|ref|ZP_08075814.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067]
 gi|322414639|gb|EFY05445.1| ErfK/YbiS/YcfS/YnhG [Phascolarctobacterium sp. YIT 12067]
          Length = 197

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 3/31 (9%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
              +H T +P          + GC+R+RN  
Sbjct: 146 GIGIHGTHDPASIGT---MASEGCIRLRNAD 173


>gi|297692149|ref|XP_002823430.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-19-like
           [Pongo abelii]
          Length = 507

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRER-----LIISGDLDPSKGLSVAFDAY-VESAVKLFQM 147
           W +L +  L     S  V  L E      L   G L      S  F    +  A++ FQ 
Sbjct: 3   WQQLWLGFLLPMTVSGRVLGLAEVAAVDYLSQYGYLQKPLEGSNNFKPEDITEALRAFQE 62

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  SG +D +T   M  P
Sbjct: 63  ASELPASGQLDDATRARMRQP 83


>gi|299821718|ref|ZP_07053606.1| carboxy-terminal processing protease [Listeria grayi DSM 20601]
 gi|299817383|gb|EFI84619.1| carboxy-terminal processing protease [Listeria grayi DSM 20601]
          Length = 487

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 2/56 (3%)

Query: 98  PIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           P     L +    V+ +   L   G       +   +D   + AV  FQ  + L+ 
Sbjct: 399 PKNTYQLNDFGKEVKNIETYLKALGF--NVGKVDGLYDLDTQYAVSRFQAENDLEQ 452


>gi|148692668|gb|EDL24615.1| matrix metallopeptidase 19, isoform CRA_c [Mus musculus]
          Length = 378

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              + L + L+  G L      +  F    +  A++ FQ   GL  SG +D +T   M  
Sbjct: 5   ADSKDLEDYLLQYGYLQKPLEGADDFRLEDITEALRTFQEASGLPISGQMDDATRARMKQ 64

Query: 168 P 168
           P
Sbjct: 65  P 65


>gi|85704443|ref|ZP_01035545.1| peptidoglycan binding domain protein [Roseovarius sp. 217]
 gi|85670851|gb|EAQ25710.1| peptidoglycan binding domain protein [Roseovarius sp. 217]
          Length = 405

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 7/78 (8%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           +G WP     PL           ++ RL   G     + +         +A++ FQ   G
Sbjct: 335 QGAWPR-GYNPLSFDER----MEMQRRLQRKGF--GIEKIDGIIGPNTVNAIRAFQQSVG 387

Query: 151 LDPSGMVDSSTLEAMNVP 168
             P G+     L  +   
Sbjct: 388 ATPDGLPSQELLALLKRS 405


>gi|163761460|ref|ZP_02168533.1| hypothetical protein HPDFL43_11221 [Hoeflea phototrophica DFL-43]
 gi|162281304|gb|EDQ31602.1| hypothetical protein HPDFL43_11221 [Hoeflea phototrophica DFL-43]
          Length = 1164

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 6/113 (5%)

Query: 33  ASVLDEIINES-YHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSR 91
               DEI+      + +    D    ++         I   +TI      +   + + +R
Sbjct: 270 PERADEIVRLREQEARLEASADALEQQLVRLDQELGGIGIDDTILSMRDRLTELETLQAR 329

Query: 92  GGW--PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
                 ++P   L LG+S+  + +L   LI  G  D      + FDA   +A+
Sbjct: 330 HATALEDVPKLRLTLGDSNAEIGQL---LIRLGRRDQPDAEDLLFDAATTAAL 379


>gi|114647860|ref|XP_509485.2| PREDICTED: matrix metalloproteinase-17 [Pan troglodytes]
          Length = 604

 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|291444959|ref|ZP_06584349.1| membrane protein [Streptomyces roseosporus NRRL 15998]
 gi|291347906|gb|EFE74810.1| membrane protein [Streptomyces roseosporus NRRL 15998]
          Length = 377

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 26/86 (30%), Gaps = 9/86 (10%)

Query: 89  LSRGGWP----ELPI-RPLHLGNSSVSVQRLRERLIISGDLDPS-KGLSVAFDAYVESAV 142
              GG P      P       G S+  V RL ++L+  G       G S  +       V
Sbjct: 290 AGAGGSPNTAVAFPGRGYFKPGQSNSHVDRLGKQLVKKGYGKHYVSGPSPLWTEADRRNV 349

Query: 143 KLFQMRHG---LDPSGMVDSSTLEAM 165
           + FQ   G       G     T   +
Sbjct: 350 EAFQRAQGWRGGAADGYPGPETWRRL 375


>gi|55742210|ref|NP_001006843.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Xenopus (Silurana) tropicalis]
 gi|49899913|gb|AAH76927.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Xenopus (Silurana) tropicalis]
          Length = 670

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)

Query: 112 QRLRER-LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             L ER L+  G +   +G +V     +++A+ L Q + GL  +G++D+ TLEAM  P
Sbjct: 43  AELAERYLLQFGYMTQEQGSNVT----LKNALTLMQQKLGLTRTGVLDTETLEAMRRP 96


>gi|332560848|ref|ZP_08415166.1| membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides WS8N]
 gi|332274646|gb|EGJ19962.1| membrane-bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides WS8N]
          Length = 413

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +    Q+L+ RL  +G    + G      +  E+A+  ++  +GL  +G
Sbjct: 353 GMTKADRQKLQRRLTSAGY--DTGGTDGVVGSKTEAAISAYEAANGLPVTG 401


>gi|171914302|ref|ZP_02929772.1| hypothetical protein VspiD_24025 [Verrucomicrobium spinosum DSM
           4136]
          Length = 385

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTK----IEFYSRNN----TYM 323
            ++ + G+ V    V  +       +    PG+   +        +E  ++N      Y+
Sbjct: 83  EIVAKIGQGVKPGSVFKSRQLTGEVLKPDAPGRDPIVTRIMWLRGMESQNKNAYGRCIYI 142

Query: 324 HDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLA 383
           H T E           + GC+R+    D+     + +   +   +E  +         + 
Sbjct: 143 HGTAEERNIGKP---VSYGCIRM-KSRDVMDVFDRTSIGSNVLVVEGKLPGHVPA--AMP 196

Query: 384 TEVP 387
           + +P
Sbjct: 197 SPLP 200


>gi|147901642|ref|NP_001091305.1| matrix metalloproteinase-9TH [Xenopus laevis]
 gi|119709546|dbj|BAF42673.1| matrix metalloproteinase-9TH [Xenopus laevis]
          Length = 683

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              +    +SV V      L+  G L   +G +      ++ A+   Q + GL  +G +D
Sbjct: 33  PGEIRKNMTSVEVAE--WYLVKFGYLPLQQGSNHH--VSLKKALSQMQSKLGLKVTGNLD 88

Query: 159 SSTLEAMNVP 168
           + TL+AM  P
Sbjct: 89  AETLDAMKTP 98


>gi|213024055|ref|ZP_03338502.1| LysM domain-containing protein [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 150

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 15/43 (34%), Gaps = 5/43 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWLLKDTP 361
             +H T  P          +SGC+R+       L   +   TP
Sbjct: 7   YLIHGTSAPDSVG---LRVSSGCIRMNAPDIKALFAQVRTGTP 46


>gi|300794469|ref|NP_001178363.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
 gi|297485306|ref|XP_002694844.1| PREDICTED: matrix metallopeptidase 15 (membrane-inserted) [Bos
           taurus]
 gi|296478084|gb|DAA20199.1| matrix metallopeptidase 15 (membrane-inserted) [Bos taurus]
          Length = 675

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|119386314|ref|YP_917369.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119376909|gb|ABL71673.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 264

 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 14/61 (22%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +    + +R  L+++G                   V+ FQ   GL   G+    TL A
Sbjct: 173 GMADRQARYVRAALVLAGYGATE--------------VRRFQKEAGLTADGIAGPKTLAA 218

Query: 165 M 165
           +
Sbjct: 219 L 219


>gi|190892606|ref|YP_001979148.1| membrane-bound lytic murein transglycosylase [Rhizobium etli CIAT
           652]
 gi|190697885|gb|ACE91970.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli CIAT 652]
          Length = 406

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G ++  ++ L+ +L   G       +     +    A++  Q R G+ 
Sbjct: 336 GAPTYLKGAPEPGLANDQMKTLQTKLQSLGH--DVGEIDGILGSGTRIAIQKEQQRLGIP 393

Query: 153 PSGMVDSSTLEAM 165
             G    + L A+
Sbjct: 394 ADGWATPALLNAL 406


>gi|416552|emb|CAA46638.1| hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    +  G    +V+ L+  L   G   P      A +    SA+  FQ   G++ +G+
Sbjct: 87  ISGVVVEEGVHESNVEILKAHLEKFGYTPPGSTFGEA-NLNYTSAILDFQEHGGINQTGI 145

Query: 157 VDSSTLEAMNVP 168
           +D+ T E ++ P
Sbjct: 146 LDADTAELLSTP 157


>gi|47228071|emb|CAF97700.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 549

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      S+     + SA+   Q  +GL  +G +D ST++AM  P     D 
Sbjct: 5   LQQYGYLPPGDMRTHSLRSPHSITSAIAAMQRFYGLTVTGAIDDSTIQAMKRPRCGVPDK 64

Query: 172 RIRQLQVNLMRIK 184
              +L+ NL R +
Sbjct: 65  FGAELKSNLRRKR 77


>gi|222084816|ref|YP_002543345.1| hemagglutinin protein [Agrobacterium radiobacter K84]
 gi|221722264|gb|ACM25420.1| hemagglutinin protein [Agrobacterium radiobacter K84]
          Length = 1225

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  L  +G    +     +      +A+K FQ   GL   G V    ++ +
Sbjct: 1167 AIRNIQAILNNNGF--DAGAPDGSMGEKTVAALKSFQKSVGLPQDGKVTDKLVKEL 1220


>gi|241205579|ref|YP_002976675.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240859469|gb|ACS57136.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 405

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 13/147 (8%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
              +G+   +       L+  +       +   F        + ++      +K  I  T
Sbjct: 272 WFALGVKPRDGNTAFGNLEGDLVLPQGR-MGPAF-IAYPNFKIYLE-----WNKSFIYTT 324

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             A   Y      G  P L   P   G +S  ++ L+ +L   G       +     +  
Sbjct: 325 SAA---YFGTRLSGAEPYLKGVP-EQGLASDQMKALQTKLQSLGH--DVGEIDGILGSGT 378

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             A++  Q R G+   G    + L A+
Sbjct: 379 RVAIQKEQQRLGMPADGWATPALLNAL 405


>gi|108762529|ref|YP_633600.1| peptidoglycan binding domain-containing protein [Myxococcus xanthus
           DK 1622]
 gi|108466409|gb|ABF91594.1| peptidoglycan binding domain protein [Myxococcus xanthus DK 1622]
          Length = 325

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           L+ERL   G      G    F      AV+ FQ   GL  SG  D +T  A+ 
Sbjct: 270 LQERLENLGF--SCGGERGQFGPKTRLAVEWFQYALGLPLSGEADEATCAALG 320


>gi|260553796|ref|ZP_05826066.1| transglycolase [Acinetobacter sp. RUH2624]
 gi|260405100|gb|EEW98600.1| transglycolase [Acinetobacter sp. RUH2624]
          Length = 432

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 40/141 (28%), Gaps = 14/141 (9%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIP--IISKETIAQTEKAIAFYQDILSRGG-----W 94
               S          A   + +       I S         AIA   D L  G      W
Sbjct: 299 ALSGSTPAGLMAPAGASGPIFLVFKNFDAIYSYNAAESYGLAIAHLSDRLKGGKPFIASW 358

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P         G S    + +++ LI  G       +          A++  Q R GL+P+
Sbjct: 359 PTDD-----PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPT 411

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G      L A       ++ Q
Sbjct: 412 GRAGQQILRAFRQEQARKMMQ 432


>gi|99082426|ref|YP_614580.1| lytic murein transglycosylase [Ruegeria sp. TM1040]
 gi|99038706|gb|ABF65318.1| Lytic murein transglycosylase [Ruegeria sp. TM1040]
          Length = 398

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 2/61 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G S   ++ L+ RL   G       +     A    AV+  Q+R G+        + L A
Sbjct: 340 GLSGDQMKELQRRLQARGH--DVGDVDGILGANTRLAVQKEQLRLGMPADAWPTPALLNA 397

Query: 165 M 165
           +
Sbjct: 398 L 398


>gi|218661403|ref|ZP_03517333.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli IE4771]
          Length = 300

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 223 QIAGYGGMQQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 275

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 276 SAVQERIGMQPDGEPSLPLLNALRR 300


>gi|196233386|ref|ZP_03132230.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
 gi|196222526|gb|EDY17052.1| ErfK/YbiS/YcfS/YnhG family protein [Chthoniobacter flavus Ellin428]
          Length = 149

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 5/49 (10%)

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDTPTW 363
                Y+H T             + GCVR+ N  +IDL   +   T   
Sbjct: 101 HDRYIYIHGTNAESRLGIP---ASFGCVRMNNLDVIDLYDRVPAGTTVE 146


>gi|73808271|ref|NP_001027449.1| putative MMP28 gene product isoform 3 precursor [Homo sapiens]
 gi|332847988|ref|XP_003315565.1| PREDICTED: matrix metalloproteinase-28-like [Pan troglodytes]
 gi|15079976|gb|AAH11774.1| Matrix metallopeptidase 28 [Homo sapiens]
          Length = 130

 Score = 39.2 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|260435447|ref|ZP_05789417.1| ErfK/YbiS/YcfS/YnhG family protein [Synechococcus sp. WH 8109]
 gi|260413321|gb|EEX06617.1| ErfK/YbiS/YcfS/YnhG family protein [Synechococcus sp. WH 8109]
          Length = 137

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 12/84 (14%)

Query: 278 GKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY-SRNNT-YMHDTPEPILFNNV 335
             +V    V            R   G  + +    + F+ +      +H T  P      
Sbjct: 51  NNKVNPTYV--THKSGQRLELR---GPSSPIGDRYMAFHRNGRGEFGIHGTAWPQWVQI- 104

Query: 336 VRFETS-GCVRV--RNIIDLDVWL 356
            R  TS GCVR+  R+I  L   +
Sbjct: 105 -RAATSLGCVRMLNRHIRQLFDAV 127


>gi|190893390|ref|YP_001979932.1| membrane-bound lytic murein transglycosylase [Rhizobium etli CIAT
           652]
 gi|190698669|gb|ACE92754.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli CIAT 652]
 gi|327189616|gb|EGE56766.1| putative membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli CNPAF512]
          Length = 407

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 330 QIAGYGGMQQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 383 SAVQERIGMQPDGEPSLPLLNALRR 407


>gi|163746382|ref|ZP_02153740.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
 gi|161380267|gb|EDQ04678.1| ErfK/YbiS/YcfS/YnhG family protein [Oceanibulbus indolifex HEL-45]
          Length = 166

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 17/136 (12%)

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHM-----IDEKGKEVFV 283
           P     ++   F  YW +P ++  +  + + R  P   +    ++               
Sbjct: 22  PPYEIHVDPDNFALYWTLPDNMAWRYTVGVGR--PGLYESGEFYVGAKKEWPSWTPT--P 77

Query: 284 EEVDWNSPEPPNFIFRQDPGKINAMAST-KIEFYSRNN---TYMHDTPEPILFNNVVRFE 339
           + +D    +   +    + G  N + S     F          +H T +P          
Sbjct: 78  DMIDREPEKYAKYSDGMEGGLNNPLGSRGLYLFTEERGDTFLRIHGTDDPSTLGKR---V 134

Query: 340 TSGCVRVRNIIDLDVW 355
           ++GC R+ N   +   
Sbjct: 135 SNGCARLVN-DQMAEL 149


>gi|109128713|ref|XP_001101050.1| PREDICTED: matrix metalloproteinase-15 [Macaca mulatta]
          Length = 669

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|109097139|ref|XP_001111542.1| PREDICTED: matrix metalloproteinase-19 isoform 1 [Macaca mulatta]
          Length = 485

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE-----RLIISGDLDPSKGLSVAFDAY-VESAVKLFQM 147
           W +L +  L     S  V  L E      L   G L      S  F    +  A++ FQ 
Sbjct: 3   WQQLWLGFLLPMTVSGRVLGLAEEMAVEYLSQYGYLQKPLEGSNNFKPEDITEALRAFQE 62

Query: 148 RHGLDPSGMVDSSTLEAMNVP 168
              L  SG +D +T   M  P
Sbjct: 63  ASELPVSGQLDDATRARMKQP 83


>gi|157375810|ref|YP_001474410.1| lytic murein transglycosylase [Shewanella sediminis HAW-EB3]
 gi|157318184|gb|ABV37282.1| lytic murein transglycosylase [Shewanella sediminis HAW-EB3]
          Length = 377

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+ +L   G                ++ ++ FQ+  GL   G    +T +A+ V
Sbjct: 320 ARVKSLQAKLNEKGF--DVGKPDGVMGRNSKTGLRAFQLSVGLVADGFPSEATFKALGV 376


>gi|146300912|ref|YP_001195503.1| peptidoglycan binding domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146155330|gb|ABQ06184.1| Peptidoglycan-binding domain 1 protein [Flavobacterium johnsoniae
           UW101]
          Length = 272

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ-LQVNLMRIK 184
            +  +   F    E AV  FQ  +G   +G VD +  + +  P+       +  N +R  
Sbjct: 47  TATDIDGDFGPATEKAVLNFQKANGQPQTGNVDQNLFDKLVSPLKKAFESPISGNNLREL 106

Query: 185 KLLEQK 190
            L   +
Sbjct: 107 ILNTAQ 112


>gi|95930333|ref|ZP_01313070.1| Peptidoglycan-binding domain 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95133585|gb|EAT15247.1| Peptidoglycan-binding domain 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 552

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 2/71 (2%)

Query: 94  WPELPI--RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W         +        V  L ++L      +P    ++  +  +   ++ FQ   GL
Sbjct: 462 WQPPSAYSGAVPPDEEGPMVLWLEQQLAHLMQREPRPDATLRLNGLLLDELQQFQQSEGL 521

Query: 152 DPSGMVDSSTL 162
              G++   TL
Sbjct: 522 AADGIIGPITL 532


>gi|227553484|ref|ZP_03983533.1| conserved hypothetical protein [Enterococcus faecalis HH22]
 gi|227177395|gb|EEI58367.1| conserved hypothetical protein [Enterococcus faecalis HH22]
          Length = 78

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +Q L   L +     P    +  + A  ++AV   Q ++GL  +G +D+ T   +   + 
Sbjct: 1   IQNLNAILAVLAY--PVDENNANYTAETKAAVSDLQQKNGLPVTGEIDNETATKIEATLG 58

Query: 171 LRI 173
             I
Sbjct: 59  KLI 61


>gi|86359153|ref|YP_471045.1| membrane-bound lytic murein transglycosylase protein [Rhizobium
           etli CFN 42]
 gi|86283255|gb|ABC92318.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli CFN 42]
          Length = 407

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 330 QIAGYGGMQQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 383 SAVQERIGMQPDGEPSLPLLNALRR 407


>gi|325918692|ref|ZP_08180790.1| lytic murein transglycosylase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535084|gb|EGD06982.1| lytic murein transglycosylase [Xanthomonas vesicatoria ATCC 35937]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            ++  L++RL   G      G+  A        ++ FQ   GL       +S L  + 
Sbjct: 366 DAITELQQRLADKGF--DVGGVDGALGPQTRQGIRAFQRSQGLPQDAYASTSLLARVR 421


>gi|322831069|ref|YP_004211096.1| Peptidoglycan-binding domain 1 protein [Rahnella sp. Y9602]
 gi|321166270|gb|ADW71969.1| Peptidoglycan-binding domain 1 protein [Rahnella sp. Y9602]
          Length = 510

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 129 GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           G +  +D  +   VKLFQ R GL   G V   TL
Sbjct: 458 GKTGQWDKDLIRKVKLFQQREGLIVDGRVGKGTL 491


>gi|86356208|ref|YP_468100.1| putative hemagglutinin protein [Rhizobium etli CFN 42]
 gi|86280310|gb|ABC89373.1| putative hemagglutinin protein [Rhizobium etli CFN 42]
          Length = 1249

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +++ ++  L  +G    +        A   +A+K FQ   G  P G V  +T++A+    
Sbjct: 1185 AIRNIQAILNNNGF--DAGVPDGEMGAKTVAAIKSFQKSIGQAPDGKVTDATVKALLERN 1242

Query: 170  DLRIRQL 176
                + +
Sbjct: 1243 KQVAKAI 1249


>gi|17986844|ref|NP_539478.1| membrane-bound lytic murein transglycosylase B [Brucella melitensis
           bv. 1 str. 16M]
 gi|17982480|gb|AAL51742.1| membrane-bound lytic murein transglycosylase b [Brucella melitensis
           bv. 1 str. 16M]
          Length = 398

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 328 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 385

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 386 ADSWPTQELLDRL 398


>gi|10946772|ref|NP_067387.1| matrix metalloproteinase-19 isoform 1 [Mus musculus]
 gi|12585271|sp|Q9JHI0|MMP19_MOUSE RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
           Full=Matrix metalloproteinase RASI; Flags: Precursor
 gi|8132443|gb|AAF73292.1|AF155221_1 matrix metalloproteinase 19 [Mus musculus]
 gi|11095502|gb|AAG29880.1|AF153199_1 matrix metalloproteinase 19 [Mus musculus]
 gi|8886433|gb|AAF80464.1| matrix metalloproteinase-19 [Mus musculus]
 gi|86577774|gb|AAI12967.1| Matrix metallopeptidase 19 [Mus musculus]
 gi|148692666|gb|EDL24613.1| matrix metallopeptidase 19, isoform CRA_a [Mus musculus]
          Length = 527

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L      +  F    +  A++ FQ   GL  SG +D +T   M  P
Sbjct: 33  LLQYGYLQKPLEGADDFRLEDITEALRTFQEASGLPISGQMDDATRARMKQP 84


>gi|332227957|ref|XP_003263157.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-15-like
           [Nomascus leucogenys]
          Length = 753

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 141 LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 200

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 201 FGVRVKANLRRRR 213


>gi|319408241|emb|CBI81894.1| Peptidoglycan binding domain protein [Bartonella schoenbuchensis
           R1]
          Length = 286

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           L    +   + R+++ L + G  +    ++   D     A+K FQ    L  +G +D   
Sbjct: 220 LKPLVTD--IIRVQKALRMFG--NQEVTITGIEDEKTMRALKQFQKIFNLPITGKIDREV 275

Query: 162 L 162
           L
Sbjct: 276 L 276


>gi|242067763|ref|XP_002449158.1| hypothetical protein SORBIDRAFT_05g005860 [Sorghum bicolor]
 gi|241935001|gb|EES08146.1| hypothetical protein SORBIDRAFT_05g005860 [Sorghum bicolor]
          Length = 985

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 48/192 (25%), Gaps = 20/192 (10%)

Query: 158 DSSTLEAMNVPV--DLRIRQLQVNLM-RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVG 214
            S T  + ++      R ++ ++ L        +        +++   A +EA E     
Sbjct: 20  GSDTYRSPSISPRESPRAKKARLELEHDPTYEPQADPDDDEEVLSQVVAKMEAEEQDVQK 79

Query: 215 LRSTVIVG---------------RVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALL 259
             +    G               R DR        + +I+       P + +  + +   
Sbjct: 80  DTAPQTTGTSSEPRSKTKKSDRARGDRGRNRFTEEVYQIIELSPSGEPLAPL--EALPKF 137

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRN 319
           R    YL      +       V   +               D     A      +     
Sbjct: 138 RAAIGYLVKEEFDITWSDWSMVPQVKRTTCWNRLCTRFIFSDGTDDLAKGYVMKQLAISF 197

Query: 320 NTYMHDTPEPIL 331
             Y HD  +  L
Sbjct: 198 WGYRHDMNKKWL 209


>gi|123090|sp|P22757|HE_PARLI RecName: Full=Hatching enzyme; Short=HE; Short=HEZ; AltName:
           Full=Envelysin; AltName: Full=Sea-urchin-hatching
           proteinase; Contains: RecName: Full=Hatching enzyme 18
           kDa form; Flags: Precursor
 gi|9996|emb|CAA37667.1| pre-pro-hatching enzyme [Paracentrotus lividus]
          Length = 587

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    +  G    +V+ L+  L   G   P      A +    SA+  FQ   G++ +G+
Sbjct: 87  ISGVVVEEGVHESNVEILKAHLEKFGYTPPGSTFGEA-NLNYTSAILDFQEHGGINQTGI 145

Query: 157 VDSSTLEAMNVP 168
           +D+ T E ++ P
Sbjct: 146 LDADTAELLSTP 157


>gi|307546096|ref|YP_003898575.1| lytic murein transglycosylase [Halomonas elongata DSM 2581]
 gi|307218120|emb|CBV43390.1| lytic murein transglycosylase [Halomonas elongata DSM 2581]
          Length = 433

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 63  IDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISG 122
           +  +        +A    AIA    I  +G WP      L        V+ +++ L   G
Sbjct: 338 LRYNNATSYALAVATLSDAIAGRAGI--QGEWPR-EQPALKR----SEVREMQQLLDARG 390

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                              ++ FQ   G+ P G    + LE +  
Sbjct: 391 F--DVGTPDGILGPNTRRGLRAFQREIGVTPDGFATKALLERLRR 433


>gi|301762074|ref|XP_002916480.1| PREDICTED: matrix metalloproteinase-24-like [Ailuropoda
           melanoleuca]
          Length = 630

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L PS   + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 65  RLANWLKSYGYLLPSDSRAPALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 122


>gi|295104835|emb|CBL02379.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
           prausnitzii SL3/3]
          Length = 215

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 8/62 (12%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +G  S +V  L+  L +         +   F A  ++ +  +Q  HGL   G+   +T  
Sbjct: 162 IGGVSYAVTVLQRHLGL--------NVDGIFGAGTKAKLVEWQKAHGLAADGICGMATWS 213

Query: 164 AM 165
           + 
Sbjct: 214 SF 215


>gi|227497825|ref|ZP_03928010.1| peptidoglycan-binding domain protein [Actinomyces urogenitalis DSM
           15434]
 gi|226832747|gb|EEH65130.1| peptidoglycan-binding domain protein [Actinomyces urogenitalis DSM
           15434]
          Length = 373

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
              + +L   L   G  +        FD     AV  +Q  +GL  +G +
Sbjct: 139 GEDIHQLETALKELGFFEDEP--DNCFDWVTRKAVVAWQKANGLRQTGTI 186


>gi|116250359|ref|YP_766197.1| peptidoglycan binding protein [Rhizobium leguminosarum bv. viciae
            3841]
 gi|115255007|emb|CAK06081.1| putative peptidoglycan binding protein [Rhizobium leguminosarum bv.
            viciae 3841]
          Length = 1267

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  L  +G    +        A   +A+K FQ   G +P G V  +T++A+
Sbjct: 1203 AIRNIQAILNNNGF--DAGVPDGEMGAKTVTAIKNFQKSVGQEPDGKVTDATVKAL 1256


>gi|157130899|ref|XP_001662053.1| matrix metalloproteinase [Aedes aegypti]
 gi|108881895|gb|EAT46120.1| matrix metalloproteinase [Aedes aegypti]
          Length = 474

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 6/71 (8%)

Query: 118 LIISGDLDPSKGL---SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIR 174
           L   G L     +       D    +A+K  Q R+ L  +G++D  T   +  P   R  
Sbjct: 54  LKDLGYLSADDVVNRLDQTTDEIGRNALKRLQRRYNLTDNGLLDDDTRRLIAAP---RCG 110

Query: 175 QLQVNLMRIKK 185
             ++N +  K 
Sbjct: 111 VAELNEIEEKW 121


>gi|256831718|ref|YP_003160445.1| Peptidoglycan-binding domain 1 protein [Jonesia denitrificans DSM
           20603]
 gi|256685249|gb|ACV08142.1| Peptidoglycan-binding domain 1 protein [Jonesia denitrificans DSM
           20603]
          Length = 471

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 2/49 (4%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           L  G+S   V+ L++ L   G       +   +   + +AV+      G
Sbjct: 161 LAPGDSGHDVKALQQELARLGHYH--GAIDGDYGPGMAAAVRELYRSSG 207


>gi|332254133|ref|XP_003276184.1| PREDICTED: matrix metalloproteinase-17 [Nomascus leucogenys]
          Length = 607

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M  P       
Sbjct: 56  LSRFGYLPPADPTTGQLQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL 115

Query: 176 LQVNLMRIKKLLEQK 190
             +   R ++     
Sbjct: 116 PVLTQARRRRQAPAP 130


>gi|21221285|ref|NP_627064.1| membrane protein [Streptomyces coelicolor A3(2)]
 gi|6689168|emb|CAB65565.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 353

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 33/149 (22%), Gaps = 12/149 (8%)

Query: 29  KPIHASVLDEIINESYHSIVNDRFDNFLA---RVDMGIDSDIPIISKETIAQTEKAIAFY 85
                                 + D   A        +      ++   +A+   A    
Sbjct: 203 GGWTDGTRTAYTAYEQTPPHTRKLDTPYAYWSNSAQYLPYRYKGVAAGDVAKAGAAGTEE 262

Query: 86  QDILSRGGWPE-LPIRP----LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVE 139
               + G     +   P       G  +  V RL  +L+  G       G    +     
Sbjct: 263 APPGAAGPASHGVAGYPGRAMFRPGADNPYVTRLGRQLVRKGFGTYYTRGPGPRWGEADR 322

Query: 140 SAVKLFQMRHG---LDPSGMVDSSTLEAM 165
             V+ FQ   G       G     T   +
Sbjct: 323 RGVQAFQRAQGWRGGAADGYPGPETWRRL 351


>gi|301176641|ref|NP_001180379.1| matrix metalloproteinase 1 [Nasonia vitripennis]
          Length = 555

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    +     +  ++ A+  FQ   GL+ +G++D+ T   M++P
Sbjct: 47  LSQYGYLPPLNPTNGGLVSEQTMQRAIAEFQSFAGLNITGVLDTDTAALMSMP 99


>gi|218671487|ref|ZP_03521157.1| hypothetical protein RetlG_07418 [Rhizobium etli GR56]
          Length = 63

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 306 NAMASTKIE-FYSR-NNTY-MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
           N + +  +  F +  +  Y +H  P+           +SGCVR+  ++IIDL   +    
Sbjct: 1   NPLGARALYIFSNGEDTLYRLHGNPDWRSIGK---AVSSGCVRLLNQDIIDLYDRVPTKA 57

Query: 361 P 361
           P
Sbjct: 58  P 58


>gi|237737468|ref|ZP_04567949.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421330|gb|EEO36377.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 124

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 6/41 (14%)

Query: 129 GLSVAFDAYV------ESAVKLFQMRHGLDPSGMVDSSTLE 163
                +   +      E+A+K FQ  + L P G+    T++
Sbjct: 75  KEDEIYTRLLWLGFSGENAIKNFQKANNLTPDGIAGPKTIK 115


>gi|195380117|ref|XP_002048817.1| GJ21109 [Drosophila virilis]
 gi|194143614|gb|EDW60010.1| GJ21109 [Drosophila virilis]
          Length = 587

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D +   SA++ FQ   GL+ +G +D  T++ M++P     
Sbjct: 40  LSQFGYLPASARNPANSGLQDKHTWVSAIQEFQSFAGLNITGELDEETMKLMSLPRCGVR 99

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 100 DRVGTGDSRSKRYALQGSRWR 120


>gi|1514961|dbj|BAA11523.1| gelatinase-b [Cynops pyrrhogaster]
          Length = 679

 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 54/189 (28%), Gaps = 38/189 (20%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              L  G S   +      L   G +      S      +  A+   Q + GL+ +G +D
Sbjct: 33  PGELVSGISDDELAE--SYLERFGYISKRARSSTH--VSLSKALLQMQKKLGLNETGELD 88

Query: 159 SSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRST 218
            STLEAM  P                         R  + ++         +G +     
Sbjct: 89  QSTLEAMKTP-------------------------RCGVPDVGNFQTF---DGDLKWDHN 120

Query: 219 VIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKG 278
            I  RV   +P L   +    F   + +       D+   L     Y  + +I ++    
Sbjct: 121 DITFRVLNYSPDLDGDVIEDAFRRAFKV-----WSDVSP-LTFTQIYSGEADIMILFGSD 174

Query: 279 KEVFVEEVD 287
                   D
Sbjct: 175 DHGDPYPFD 183


>gi|218508399|ref|ZP_03506277.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli Brasil 5]
          Length = 264

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 187 QIAGYGGMQQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 239

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 240 SAVQERIGMQPDGEPSLPLLNALRR 264


>gi|320326151|gb|EFW82207.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330685|gb|EFW86662.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330882645|gb|EGH16794.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 413

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A  ++A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGTADGVIGAMTQAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|163844269|ref|YP_001621924.1| lytic murein transglycosylase [Brucella suis ATCC 23445]
 gi|163674992|gb|ABY39102.1| lytic murein transglycosylase [Brucella suis ATCC 23445]
          Length = 408

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 6/55 (10%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D   G +        +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGKIGATSR------AAIEAFQQRNGLEPDGHPSKEVLSVLRR 407


>gi|23499837|ref|NP_699277.1| transglycosylase [Brucella suis 1330]
 gi|161620160|ref|YP_001594046.1| lytic murein transglycosylase [Brucella canis ATCC 23365]
 gi|254702504|ref|ZP_05164332.1| lytic murein transglycosylase [Brucella suis bv. 3 str. 686]
 gi|260568590|ref|ZP_05839059.1| lytic murein transglycosylase [Brucella suis bv. 4 str. 40]
 gi|261753077|ref|ZP_05996786.1| lytic Murein transglycosylase [Brucella suis bv. 3 str. 686]
 gi|23463407|gb|AAN33282.1| transglycosylase, putative [Brucella suis 1330]
 gi|161336971|gb|ABX63275.1| lytic murein transglycosylase [Brucella canis ATCC 23365]
 gi|260155255|gb|EEW90336.1| lytic murein transglycosylase [Brucella suis bv. 4 str. 40]
 gi|261742830|gb|EEY30756.1| lytic Murein transglycosylase [Brucella suis bv. 3 str. 686]
          Length = 408

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 6/55 (10%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+  L   G  D   G +        +A++ FQ R+GL+P G      L  +  
Sbjct: 359 ELQTHLKALGYYDGKIGATSR------AAIEAFQQRNGLEPDGHPSKEVLSVLRR 407


>gi|293611414|ref|ZP_06693710.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826286|gb|EFF84655.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 430

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQAQKMMQ 430


>gi|270004036|gb|EFA00484.1| hypothetical protein TcasGA2_TC003344 [Tribolium castaneum]
          Length = 423

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV--------PV 169
           L   G L+ +  L          A+  FQ  + L   G ++  TL  +N         P 
Sbjct: 36  LEKFGYLESNGPLIT----ETSEALIKFQEFYNLPADGTLNQETLALINTPRCGVRDNPT 91

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             R+   + +   +K            L    
Sbjct: 92  AYRVHTNKWSKTNLKWYFSLATNEMKELAQKA 123


>gi|50086598|ref|YP_048108.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter sp. ADP1]
 gi|49532572|emb|CAG70286.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter sp. ADP1]
          Length = 431

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 36/116 (31%), Gaps = 6/116 (5%)

Query: 55  FLARVDMGIDSDIP--IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLH-LGNSSVSV 111
             A     +       I S         AIA   D   RG  P +   P    G S    
Sbjct: 311 AGANGPAFLVFKNFDAIYSYNAAESYGLAIAHLSD-RLRGTGPFVTAWPTDDPGTSRAER 369

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + +++ L+  G       +          A++  Q R GL+P+G      L A   
Sbjct: 370 REIQQFLLKRGY--DIGAVDGLIGDKTRQAIRQEQTRLGLNPTGRAGQQILRAFRQ 423


>gi|4505211|ref|NP_002419.1| matrix metalloproteinase-15 preproprotein [Homo sapiens]
 gi|1705988|sp|P51511|MMP15_HUMAN RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
           Full=Membrane-type matrix metalloproteinase 2;
           Short=MT-MMP 2; Short=MTMMP2; AltName:
           Full=Membrane-type-2 matrix metalloproteinase;
           Short=MT2-MMP; Short=MT2MMP; AltName: Full=SMCP-2;
           Flags: Precursor
 gi|963056|emb|CAA88373.1| membrane-type matrix metalloproteinase 2 [Homo sapiens]
 gi|33585869|gb|AAH55428.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|54673588|gb|AAH36495.1| Matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|116069818|gb|ABJ53423.1| matrix metallopeptidase 15 (membrane-inserted) [Homo sapiens]
 gi|119603371|gb|EAW82965.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|119603372|gb|EAW82966.1| matrix metallopeptidase 15 (membrane-inserted), isoform CRA_a [Homo
           sapiens]
 gi|261858710|dbj|BAI45877.1| matrix metallopeptidase 15 [synthetic construct]
          Length = 669

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|15966907|ref|NP_387260.1| putative protease transmembrane protein [Sinorhizobium meliloti
           1021]
 gi|15076180|emb|CAC47733.1| Serine protease [Sinorhizobium meliloti 1021]
          Length = 639

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVE--SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             V    E +  SG L          D   E  +A+KLFQ   GL  +G +D +T + + 
Sbjct: 263 DEVAAFDEIMKESGLLSEGFETDT--DPATERKAALKLFQNELGLPETGELDEATKDELL 320

Query: 167 VPVDLR 172
            P + R
Sbjct: 321 DPREWR 326


>gi|297698857|ref|XP_002826519.1| PREDICTED: matrix metalloproteinase-15-like [Pongo abelii]
          Length = 669

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMRIK 184
              +++ NL R +
Sbjct: 117 FGVRVKANLRRRR 129


>gi|187735322|ref|YP_001877434.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425374|gb|ACD04653.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 243

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 17/85 (20%)

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVR-FETSGCVRVRNIIDLDVWLLKDTPT 362
             + M        +     +H          V R   + GCVR+    ++   L + T  
Sbjct: 163 DGSPM-PYWQRLTNA-GLGLH-------VGKVRRHPVSHGCVRL--PRNVAEILYRQTSI 211

Query: 363 WSRYHIEEVVKTRKTTPVKLATEVP 387
            +   I++        PV  A ++P
Sbjct: 212 GTPVTIQKT-----PLPVPEAQKIP 231


>gi|239750339|ref|XP_002347374.1| PREDICTED: matrix metalloproteinase-19-like [Homo sapiens]
          Length = 183

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|119617251|gb|EAW96845.1| matrix metallopeptidase 19, isoform CRA_b [Homo sapiens]
          Length = 173

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|304360975|ref|YP_003857157.1| gp26 [Mycobacterium phage LeBron]
 gi|302858244|gb|ADL70993.1| gp26 [Mycobacterium phage LeBron]
          Length = 343

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 10/99 (10%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG----------LDP 153
            G+S   V   RE+L           L+  +DA +   +  FQ+R            L  
Sbjct: 14  PGDSGTQVLAAREKLKAKFSYGKHLKLTTLYDAELLPVLVEFQLRTNVQRALTGKQLLRV 73

Query: 154 SGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG 192
            G++D +T  A+ +     + +  +  +           
Sbjct: 74  DGILDYATQVALGIVAPPAVVKPLLFTVHGTGQPVPDGP 112


>gi|304312079|ref|YP_003811677.1| Putative peptidoglycan-binding protein [gamma proteobacterium HdN1]
 gi|301797812|emb|CBL46034.1| Putative peptidoglycan-binding protein [gamma proteobacterium HdN1]
          Length = 444

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V+ L+  L   G    +        +   +A++ FQ   G+   G        A+ V
Sbjct: 383 AKVKALQAALNAKGF--DAGVPDGIAGSGTRAAIRAFQKSLGMIADGYPSPDVFRALGV 439


>gi|294814200|ref|ZP_06772843.1| Peptidoglycan-binding protein [Streptomyces clavuligerus ATCC
           27064]
 gi|326442595|ref|ZP_08217329.1| Peptidoglycan-binding domain 1 protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294326799|gb|EFG08442.1| Peptidoglycan-binding protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 470

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             + V++    L   G       +  +F      AV+ +Q   GL  +G V 
Sbjct: 229 RGLDVKQFETNLSALGY--TGFTVDDSFTELTARAVRAWQRDLGLPRTGRVG 278


>gi|296817711|ref|XP_002849192.1| ABC protein [Arthroderma otae CBS 113480]
 gi|238839645|gb|EEQ29307.1| ABC protein [Arthroderma otae CBS 113480]
          Length = 1396

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 12/176 (6%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLRE-------RLIISGDLDPSKGLSVAFDAYVESAV 142
             GG   +          S S   LR        RL  +  +   + +S  + A + S +
Sbjct: 33  GTGGGKAVDGDVGKEAAQSASKPSLRWYQRLNPIRLQQAPPVPSERTISKEYGAGLLS-I 91

Query: 143 KLFQMRHGLDPSGMVDSSTLEAM-NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIP 201
             FQ  H L  +G +    L+ +  V  D  +  L   L         + G ++ L+   
Sbjct: 92  ITFQWMHPLMLTGYLRPLQLQDIWLVNPDRSVEGLAARLE-ASFQKRIERGDKHPLLGAG 150

Query: 202 --AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDM 255
                LE        + + V+       T  L S         +  +P   I+  +
Sbjct: 151 YETFKLEIWIGACCQMVACVLQVLTPYTTKYLISFATEAYIAQHKHVPGPHIRNGI 206


>gi|212212506|ref|YP_002303442.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii CbuG_Q212]
 gi|212010916|gb|ACJ18297.1| ErfK/YbiS/YcfS/YnhG family protein [Coxiella burnetii CbuG_Q212]
          Length = 160

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 33/172 (19%)

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVD-------RQTPILHSRINRIMFNPYWVI 246
            Y+ V+IP  +L    + +V  R  V   R          +TP     I   +       
Sbjct: 3   TYLTVDIPRQTLTLFRDNQVIKRYRVSTARNGPGELINSEKTPRGWHIIRAKV---GEGC 59

Query: 247 PRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKIN 306
           P + +  +           LK           ++  +  + W S               N
Sbjct: 60  PPNTVFVERRPTGEVYSPALKRR------YPDRDWVLTRILWLSGLEVG---------KN 104

Query: 307 AMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            + +       R   Y+H + + I+        + GC+R+ N  II+L   +
Sbjct: 105 RLGNVDTM---RRYVYIHGSGDEIIMGKPG---SRGCIRMHNHDIIELFDEV 150


>gi|291299237|ref|YP_003510515.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568457|gb|ADD41422.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 198

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           V   +  L   G L   + +   F      A K ++   GL  +G V + + 
Sbjct: 74  VHLWQAILAADGYLT-DEQIDGYFGPATAKATKQWKADRGLTANGRVGNGSW 124


>gi|218516691|ref|ZP_03513531.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli 8C-3]
          Length = 77

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G ++  ++ L+ +L   G       +     +    A++  Q R G+ 
Sbjct: 7   GAPTYLKGAPEPGLANDQMKTLQTKLQSLGH--DVGEIDGILGSGTRIAIQKEQQRLGIP 64

Query: 153 PSGMVDSSTLEAM 165
             G    + L A+
Sbjct: 65  ADGWATPALLNAL 77


>gi|114567247|ref|YP_754401.1| C-terminal processing peptidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114338182|gb|ABI69030.1| C-terminal processing peptidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 497

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 2/67 (2%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           + L  SG         +  D    +A+K FQ    L PSG++D +T EA+N      I  
Sbjct: 425 KILSASGY--ELDKPDMTLDIKTFNAIKKFQQEQRLYPSGILDFTTQEALNRKRQELINC 482

Query: 176 LQVNLMR 182
                 R
Sbjct: 483 YDQQYAR 489


>gi|261222590|ref|ZP_05936871.1| LOW QUALITY PROTEIN: transglycolase [Brucella ceti B1/94]
 gi|265998555|ref|ZP_06111112.1| LOW QUALITY PROTEIN: transglycolase [Brucella ceti M490/95/1]
 gi|260921174|gb|EEX87827.1| LOW QUALITY PROTEIN: transglycolase [Brucella ceti B1/94]
 gi|262553179|gb|EEZ09013.1| LOW QUALITY PROTEIN: transglycolase [Brucella ceti M490/95/1]
          Length = 298

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 228 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 285

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 286 ADSWPTQELLDRL 298


>gi|260459247|ref|ZP_05807502.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034801|gb|EEW36057.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 375

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 13/99 (13%)

Query: 272 HMIDEKGKEVFVEEVDWNSPEPPNFIFRQ-----DPGKINAMASTKIEFYSRN---NTYM 323
            +     +E        +  +     + Q       G  N + +  I  Y      +  +
Sbjct: 275 TVAVGDKQEWPRWIPTLDMQKREPKHYAQYKDGMPGGGQNPLGARAIYLYDGKKDTHLRI 334

Query: 324 HDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDT 360
           H T  P          ++GC R+   +++DL   +   T
Sbjct: 335 HGTIAPQSIGTS---ASNGCFRMMNEHVMDLYSRVRVGT 370


>gi|262281539|ref|ZP_06059318.1| transglycosylase [Acinetobacter calcoaceticus RUH2202]
 gi|262256998|gb|EEY75737.1| transglycosylase [Acinetobacter calcoaceticus RUH2202]
          Length = 430

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           IA     +   +   +   WP         G S    + +++ LI  G       +    
Sbjct: 339 IAHLSDRLKGARPFATS--WPTDD-----PGTSRAERREIQQFLINRGY--DIGAVDGLI 389

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                 A++  Q R GL+P+G      L A       ++ Q
Sbjct: 390 GDKTRVAIRQEQTRLGLNPTGRAGQQILRAFRQEQAKKMMQ 430


>gi|84514388|ref|ZP_01001752.1| hypothetical protein SKA53_09219 [Loktanella vestfoldensis SKA53]
 gi|84511439|gb|EAQ07892.1| hypothetical protein SKA53_09219 [Loktanella vestfoldensis SKA53]
          Length = 191

 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 51/189 (26%), Gaps = 23/189 (12%)

Query: 169 VDLRIRQLQVNLMRI--KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDR 226
              R   L      +    +L  +     V  NI A  +    +    L     VG +  
Sbjct: 9   PSRRALLLGATAATLFAPSILRAQTERPPVDRNIAAFRVHEWRDHFDSL----GVGAILA 64

Query: 227 QTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEV 286
            T  +        F  +W  P   ++  +          L       + +K         
Sbjct: 65  DTKSM--------FLQHWT-PDGDMR--IYPTSVPLSDDLTRTGFTEVIDKRVAPSWAPT 113

Query: 287 DWNSPEPPNFIFRQDPG-KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR 345
                  P +      G  +N M S  +    +    +H T +        R  ++GC+ 
Sbjct: 114 PAMRERNPEWPAFIPGGDPLNPMGSHALYLSWQF-YRIHGTQDTRKIG---RKSSNGCIG 169

Query: 346 VRNIIDLDV 354
           + N   +  
Sbjct: 170 LYN-EQIAE 177


>gi|311107456|ref|YP_003980309.1| peptidoglycan binding domain-containing protein 1 [Achromobacter
           xylosoxidans A8]
 gi|310762145|gb|ADP17594.1| peptidoglycan binding domain protein 1 [Achromobacter xylosoxidans
           A8]
          Length = 549

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 22/65 (33%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S   ++ L+E L   G             +    AV+  Q++  L   G V     +
Sbjct: 473 PGLSRAQIKELQEMLYGLGH--DVGVADGIPGSKTRDAVREEQVKRKLPEDGRVGKRIYD 530

Query: 164 AMNVP 168
           A+   
Sbjct: 531 AIKAT 535


>gi|116332909|ref|YP_794436.1| periplasmic protease [Lactobacillus brevis ATCC 367]
 gi|116098256|gb|ABJ63405.1| Periplasmic protease [Lactobacillus brevis ATCC 367]
          Length = 344

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 132 VAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             ++     AV+ FQ +H L  +G VD  T   +  P
Sbjct: 147 NKYNTATYYAVRSFQKKHHLKVTGNVDEKTWVKLGFP 183


>gi|34784688|gb|AAH57745.1| Mmp9 protein [Xenopus laevis]
          Length = 671

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L   +G +      +++A+ + Q + GL  +G++D+ TLEAM  P
Sbjct: 50  LLQFGYLIQEQGSNAT----LQNALTIMQQKLGLKETGVLDAETLEAMKRP 96


>gi|313109433|ref|ZP_07795393.1| hypothetical protein PA39016_001790033 [Pseudomonas aeruginosa
           39016]
 gi|310881895|gb|EFQ40489.1| hypothetical protein PA39016_001790033 [Pseudomonas aeruginosa
           39016]
          Length = 448

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|291300979|ref|YP_003512257.1| peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570199|gb|ADD43164.1| Peptidoglycan-binding domain 1 protein [Stackebrandtia nassauensis
           DSM 44728]
          Length = 201

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +S   +  L + ++++ D    +G+   F      A + +Q  +GL+P+G VD  +  
Sbjct: 68  SSDTDLVTLWQAIMVAEDKLALEGMDGVFGTKTAEATEEWQEDNGLEPTGQVDKQSWA 125


>gi|328865825|gb|EGG14211.1| hypothetical protein DFA_11980 [Dictyostelium fasciculatum]
          Length = 286

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   V  L+  L  S    P   +S  FD + E  +  +Q  + +  +G++D +T  ++ 
Sbjct: 42  SGDDVIILQGLLARS---VPDLPISGIFDEFTEVCLMKYQSMYNIAITGILDVNTANSIL 98

Query: 167 VP 168
           + 
Sbjct: 99  LT 100


>gi|296444924|ref|ZP_06886886.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
 gi|296257592|gb|EFH04657.1| ErfK/YbiS/YcfS/YnhG family protein [Methylosinus trichosporium
           OB3b]
          Length = 205

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 21/74 (28%), Gaps = 18/74 (24%)

Query: 298 FRQDPGKINAMASTKIEF-------YSRNNTY------MHDTPEPILFNNVVRFETSGCV 344
           +    G        K+ +          ++ +      +H T          R  + GCV
Sbjct: 56  YVTPRGTYAPTGLQKMHYSRKYHMSPMPHSIFFNGGYAIHGTYSTGALG---RPASHGCV 112

Query: 345 RVR--NIIDLDVWL 356
           R+   N   L   +
Sbjct: 113 RLAPGNAAALYKMV 126


>gi|221640620|ref|YP_002526882.1| Lytic murein transglycosylase [Rhodobacter sphaeroides KD131]
 gi|221161401|gb|ACM02381.1| Lytic murein transglycosylase precursor [Rhodobacter sphaeroides
           KD131]
          Length = 417

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 13/84 (15%)

Query: 89  LSRGGWPELPIRPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              GGWP         G+    S     L+  L  +G    + G          SA++ +
Sbjct: 344 AIAGGWPR--------GDRALASAERTELQRLLTAAGF--DTGGADGMIGPNTLSALRAW 393

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPV 169
           Q   GL   G  + + L  +    
Sbjct: 394 QAARGLVADGYANEAVLNRLREGA 417


>gi|39936840|ref|NP_949116.1| hypothetical protein RPA3779 [Rhodopseudomonas palustris CGA009]
 gi|39650697|emb|CAE29220.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 519

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+    +    L   T
Sbjct: 125 NGVALHGGPLPGY------PASHGCVRM--PYEFAEKLFDKT 158


>gi|150018544|ref|YP_001310798.1| hypothetical protein Cbei_3725 [Clostridium beijerinckii NCIMB
           8052]
 gi|149905009|gb|ABR35842.1| Domain of unknown function DUF1906 [Clostridium beijerinckii NCIMB
           8052]
          Length = 714

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
            L+  L  +G      G    +   V++AV  FQ   GL+  G+  S T  ++ V     
Sbjct: 242 LLQFALYCNGKEFDPNGFDGGYGNGVKNAVTKFQSFCGLNADGIAGSQTFASLLVSTGDN 301

Query: 173 IRQ 175
            R+
Sbjct: 302 TRK 304


>gi|295425350|ref|ZP_06818053.1| ErfK family cell surface protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295065126|gb|EFG56031.1| ErfK family cell surface protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 211

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 55/186 (29%), Gaps = 23/186 (12%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
              P+ S +  E  KV   S     R  +    L S     + +     P+   +K ++ 
Sbjct: 25  KEAPSQSSKPKETQKVKKVSAAEAARPYKDPKDLRSEGTWKLKSETKAYPKITSKKGLVI 84

Query: 258 L--LRQDPQYLKDNNIHMI--------DEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
              L+ +  Y+  N   +            GK        +   E  +  F     +   
Sbjct: 85  KVSLKGNRVYIIKNGKRVYTMLSSAGIYHNGKFDTPTGTYYVRYERGDTFFNHKLKEG-- 142

Query: 308 MASTKIEFYSRNNTYMHDTPEP--------ILFNNVVRFETSGCVRVRNIIDLDVWLLKD 359
            A+    +  +N    H  P                    + GC+R+        W++K+
Sbjct: 143 -ANYWTSWDKKNVYLFHSVPTKANGKYNLTEAAKLGKTQGSHGCIRLSLPD--SKWIMKN 199

Query: 360 TPTWSR 365
            P  ++
Sbjct: 200 IPAGTK 205


>gi|147899799|ref|NP_001079972.1| matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa
           type IV collagenase) [Xenopus laevis]
 gi|5305383|gb|AAD41624.1|AF072455_1 gelatinase B [Xenopus laevis]
          Length = 671

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L   +G +      +++A+ + Q + GL  +G++D+ TLEAM  P
Sbjct: 50  LLQFGYLIQEQGSNAT----LQNALTIMQQKLGLKETGVLDAETLEAMKRP 96


>gi|301606175|ref|XP_002932698.1| PREDICTED: matrix metalloproteinase-21-like [Xenopus (Silurana)
           tropicalis]
          Length = 604

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                A+K FQ  + L  +G++D +T+ AMN P
Sbjct: 101 PQFIDALKKFQKLNNLPATGILDDATINAMNKP 133


>gi|117625600|ref|YP_858923.1| putative general secretion pathway protein A [Escherichia coli APEC
           O1]
 gi|115514724|gb|ABJ02799.1| putative general secretion pathway protein A [Escherichia coli APEC
           O1]
          Length = 191

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 94  WKMSPEGESTIMRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 151

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 152 KTDGVVGFSTL 162


>gi|91212760|ref|YP_542746.1| general secretion pathway protein A [Escherichia coli UTI89]
 gi|218560384|ref|YP_002393297.1| general secretory pathway component, cryptic [Escherichia coli S88]
 gi|237703053|ref|ZP_04533534.1| general secretion pathway protein A [Escherichia sp. 3_2_53FAA]
 gi|91074334|gb|ABE09215.1| probable general secretion pathway protein A [Escherichia coli
           UTI89]
 gi|218367153|emb|CAR04927.1| general secretory pathway component, cryptic [Escherichia coli S88]
 gi|226902317|gb|EEH88576.1| general secretion pathway protein A [Escherichia sp. 3_2_53FAA]
 gi|294492719|gb|ADE91475.1| putative general secretory pathway protein A [Escherichia coli
           IHE3034]
 gi|307628358|gb|ADN72662.1| general secretory pathway component, cryptic [Escherichia coli
           UM146]
 gi|315284602|gb|EFU44047.1| conserved hypothetical protein [Escherichia coli MS 110-3]
 gi|323950237|gb|EGB46119.1| general secretion pathway protein A [Escherichia coli H252]
 gi|323954554|gb|EGB50337.1| general secretion pathway protein A [Escherichia coli H263]
          Length = 489

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTIMRDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|304392959|ref|ZP_07374890.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
 gi|303294957|gb|EFL89326.1| ErfK/YbiS/YcfS/YnhG [Ahrensia sp. R2A130]
          Length = 197

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 5/34 (14%)

Query: 323 MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDV 354
           +H T +P       R  ++GC+R+   ++ DL  
Sbjct: 156 IHGTTQPRSIG---RSVSNGCIRMLNEHVKDLYE 186


>gi|297700574|ref|XP_002827314.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-28-like
           [Pongo abelii]
          Length = 511

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           W  L  +P   G        LR+     L   G L+     +    +    A++ FQ   
Sbjct: 17  WGRLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPT-SSRFSDAIRAFQWVS 70

Query: 150 GLDPSGMVDSSTLEAMNVP 168
            L  SG++D +TL  M  P
Sbjct: 71  QLPVSGVLDRATLRQMTRP 89


>gi|158421788|ref|YP_001523080.1| lytic murein transglycosylase precursor [Azorhizobium caulinodans
           ORS 571]
 gi|158328677|dbj|BAF86162.1| lytic murein transglycosylase precursor [Azorhizobium caulinodans
           ORS 571]
          Length = 453

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L+ RL   G       +          AV+ FQ R G+ P G  +   L  M  
Sbjct: 401 ELQTRLSQMGY--DIGNIDGILGQKTRVAVQDFQTRAGMIPDGYPNLDVLARMRQ 453


>gi|15599187|ref|NP_252681.1| hypothetical protein PA3992 [Pseudomonas aeruginosa PAO1]
 gi|9950184|gb|AAG07379.1|AE004817_3 hypothetical protein PA3992 [Pseudomonas aeruginosa PAO1]
          Length = 448

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|16330360|ref|NP_441088.1| OxPPCycle gene [Synechocystis sp. PCC 6803]
 gi|2498704|sp|P73720|OPCA_SYNY3 RecName: Full=Putative OxPP cycle protein opcA
 gi|1652850|dbj|BAA17768.1| OxPPCycle gene [Synechocystis sp. PCC 6803]
          Length = 475

 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 7/96 (7%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             VQ L   L   G    +  +       + +A+K  Q   G+  +G+      +A+   
Sbjct: 75  DRVQSL---LAALGYY--TGPIDGITGPRMTAAIKSAQKALGVTATGLSSPEFKQALQTA 129

Query: 169 VDL--RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPA 202
            +   R   L     RI K     +    +   I A
Sbjct: 130 FETAHREGNLLSTAERITKPYSPDLEGSGIADTIAA 165


>gi|304409229|ref|ZP_07390850.1| lytic murein transglycosylase [Shewanella baltica OS183]
 gi|307303232|ref|ZP_07582987.1| lytic murein transglycosylase [Shewanella baltica BA175]
 gi|304353050|gb|EFM17447.1| lytic murein transglycosylase [Shewanella baltica OS183]
 gi|306913592|gb|EFN44014.1| lytic murein transglycosylase [Shewanella baltica BA175]
          Length = 438

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+ +L  +G                 + ++ FQ    
Sbjct: 362 NGGLPLTVSPPEQPRLSREQVKQLQAKLNEAGF--DVGKPDGVLGRNSVAGLQAFQRSKQ 419

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 420 MIADGFPSPEVFSALGLS 437


>gi|182679306|ref|YP_001833452.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182635189|gb|ACB95963.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 304

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 16/123 (13%)

Query: 87  DILSRGGWPELPIRPLHLGNSSVS------VQRLRERLIISGDLDPSKGLSVAFDAYVES 140
            + + G    +P  P+  G    +      ++ L+  L I G       ++  +    E+
Sbjct: 172 QLAAAGVGLYVPPSPIVEGPRHQNGEHGQHIETLQSLLAILGY---GLSITNLYGMKTEA 228

Query: 141 AVKLFQMRHGLD-PSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN 199
            V+ FQ  +      G+ D ST+E +   +  R      +     + +      +     
Sbjct: 229 VVRAFQRHYRPALIDGIADVSTIETLKALLAAR------SAADKPQKVSSHPPEKAEKAE 282

Query: 200 IPA 202
            PA
Sbjct: 283 KPA 285


>gi|126724387|ref|ZP_01740230.1| Lytic murein transglycosylase [Rhodobacterales bacterium HTCC2150]
 gi|126705551|gb|EBA04641.1| Lytic murein transglycosylase [Rhodobacterales bacterium HTCC2150]
          Length = 434

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           GWP    RPL    S    + +++RLI  G    + G+          AV+ +Q   G  
Sbjct: 368 GWPR-GDRPL----SFSEKKEMQKRLIRKGF--NTGGVDGIIGPNTIQAVREYQASIGWV 420

Query: 153 PSGMVDSSTLEAMN 166
           P G V    L+ + 
Sbjct: 421 PDGYVSLEVLKKLR 434


>gi|77464706|ref|YP_354210.1| membrane bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides 2.4.1]
 gi|77389124|gb|ABA80309.1| Membrane bound lytic murein transglycosylase B [Rhodobacter
           sphaeroides 2.4.1]
          Length = 417

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 13/84 (15%)

Query: 89  LSRGGWPELPIRPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              GGWP         G+    S     L+  L  +G    + G          SA++ +
Sbjct: 344 AIAGGWPR--------GDRALASAERTELQRLLTAAGF--DTGGADGMIGPNTLSALRAW 393

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPV 169
           Q   GL   G  + + L  +    
Sbjct: 394 QAARGLVADGYANEAVLNRLREGA 417


>gi|22298082|ref|NP_681329.1| putative OxPPCycle protein OpcA [Thermosynechococcus elongatus
           BP-1]
 gi|22294260|dbj|BAC08091.1| opcA [Thermosynechococcus elongatus BP-1]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           ++ L   G    +  L      +++SA++  + +H L  +G V     EA+
Sbjct: 59  QQLLAALGYY--TGPLDGILGPWMQSAIRTAEKKHNLPLTGRVTPQLREAL 107


>gi|281346053|gb|EFB21637.1| hypothetical protein PANDA_004527 [Ailuropoda melanoleuca]
          Length = 564

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS   + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 4   LKSYGYLLPSDSRAPALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 56


>gi|192292666|ref|YP_001993271.1| hypothetical protein Rpal_4300 [Rhodopseudomonas palustris TIE-1]
 gi|192286415|gb|ACF02796.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 519

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+    +    L   T
Sbjct: 125 NGVALHGGPLPGY------PASHGCVRM--PYEFAEKLFDKT 158


>gi|326331898|ref|ZP_08198185.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
 gi|325950395|gb|EGD42448.1| peptidoglycan binding domain-containing protein [Nocardioidaceae
           bacterium Broad-1]
          Length = 450

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 4/81 (4%)

Query: 86  QDILSRGGWPELPIRP----LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +D+ +RG W  L        L  G++   V+ L+  L  +   +    ++   D      
Sbjct: 363 RDLWTRGAWKTLWAANRHPILKRGSAGDQVRDLQRALNSTTRTEERVKVTGVLDWTTHVG 422

Query: 142 VKLFQMRHGLDPSGMVDSSTL 162
           +  +Q R G   +GM    T 
Sbjct: 423 LVAYQRRLGRTTNGMATDITW 443


>gi|307186245|gb|EFN71910.1| Interstitial collagenase [Camponotus floridanus]
          Length = 255

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 29/84 (34%), Gaps = 4/84 (4%)

Query: 107 SSVSVQRLRERLIISGDLDPSK--GLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTL 162
           +   V      L   G L+  +    S   D    +  A+ LFQ  +GL  +G++   T+
Sbjct: 23  TYDDVAEAFRYLRTYGFLENEENHQQSSLLDNATALSEALSLFQEYYGLPGNGVLTVETI 82

Query: 163 EAMNVPVDLRIRQLQVNLMRIKKL 186
             M  P          + +  K  
Sbjct: 83  RVMRRPRCGAADIHAYSPLTRKWP 106


>gi|217976443|ref|YP_002360590.1| hypothetical protein Msil_0248 [Methylocella silvestris BL2]
 gi|217501819|gb|ACK49228.1| hypothetical protein Msil_0248 [Methylocella silvestris BL2]
          Length = 286

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 26/78 (33%), Gaps = 11/78 (14%)

Query: 105 GNSSVSVQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQ---------MRHGLDP 153
           G+    V  +++ L I   G ++ ++     +      AV  ++               P
Sbjct: 28  GDRGQHVALIQQALTILGAGLIEANEITREFYGPSTSRAVLKYKGPPRNILNTELRQTKP 87

Query: 154 SGMVDSSTLEAMNVPVDL 171
             +V   T+  ++  +  
Sbjct: 88  DAIVGKRTIAWLDQDMKE 105


>gi|107103508|ref|ZP_01367426.1| hypothetical protein PaerPA_01004578 [Pseudomonas aeruginosa PACS2]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|29565799|ref|NP_817371.1| gp33 [Mycobacterium phage Che8]
 gi|29424524|gb|AAN12431.1| gp33 [Mycobacterium phage Che8]
          Length = 333

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 17/87 (19%)

Query: 102 LHLGNSSVSVQRLRERLII-----SGDLDPSKGLSVAFDAYVESAVKLFQMRH------- 149
           L  G+SS  ++R++  +       +GDL      +  +D  + +AV   Q R+       
Sbjct: 10  LGPGDSSEEIRRIKTFMRKKFASYAGDL----ADTPLYDEQMTAAVAEMQARYNAAGLLR 65

Query: 150 -GLDPSGMVDSSTLEAMNVPVDLRIRQ 175
            GL   G+V + T   M       +  
Sbjct: 66  DGLYIPGIVGAETKYVMGYLPRPVVDT 92


>gi|17231510|ref|NP_488058.1| hypothetical protein all4018 [Nostoc sp. PCC 7120]
 gi|17133153|dbj|BAB75717.1| opcA [Nostoc sp. PCC 7120]
          Length = 459

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L   G    +  +        E+A++  Q+++ L  +G     T+  +      R
Sbjct: 65  LASLGFY--NGPIDGILGPQTETALRQVQIKYALPETGTATPETIAKLREEFVKR 117


>gi|83859611|ref|ZP_00953131.1| hypothetical protein OA2633_06419 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851970|gb|EAP89824.1| hypothetical protein OA2633_06419 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 472

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 35/124 (28%), Gaps = 17/124 (13%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHL 104
             ++ +  +  +   +  +    P  ++ +I    +  A   D         +    L  
Sbjct: 194 RPLMPESREAAMRYWNRSVAWGRPFGAQSSILAQRRLQAHLVDC-------PVTQDSLAR 246

Query: 105 GNSSVS-----VQRLRER---LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
                      V  L  R   L   G    +  +   + A    AV+ FQ   G D +  
Sbjct: 247 IARDPDRVMADVIGLNLRQAALSALGYY--NGSIDGTYGAETRRAVRAFQRELGYDETAS 304

Query: 157 VDSS 160
           +   
Sbjct: 305 LTPR 308


>gi|260426102|ref|ZP_05780081.1| lytic murein transglycosylase [Citreicella sp. SE45]
 gi|260420594|gb|EEX13845.1| lytic murein transglycosylase [Citreicella sp. SE45]
          Length = 391

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P       + G S   ++RL+  L   G       +     A   +AV+  Q + GL 
Sbjct: 321 GAPVYDAGNPNPGLSGDQMKRLQTALAGRGY--DVGAIDGILGAGTRAAVRDMQAQLGLP 378

Query: 153 PSG 155
             G
Sbjct: 379 ADG 381


>gi|218889726|ref|YP_002438590.1| putative murein transglycosylase [Pseudomonas aeruginosa LESB58]
 gi|218769949|emb|CAW25710.1| putative murein transglycosylase [Pseudomonas aeruginosa LESB58]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|116052030|ref|YP_789126.1| putative murein transglycosylase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254236884|ref|ZP_04930207.1| hypothetical protein PACG_02905 [Pseudomonas aeruginosa C3719]
 gi|115587251|gb|ABJ13266.1| putative murein transglycosylase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168815|gb|EAZ54326.1| hypothetical protein PACG_02905 [Pseudomonas aeruginosa C3719]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|254388457|ref|ZP_05003692.1| peptidoglycan-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|197702179|gb|EDY47991.1| peptidoglycan-binding domain-containing protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 349

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 2/52 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             + V++    L   G       +  +F      AV+ +Q   GL  +G V 
Sbjct: 108 RGLDVKQFETNLSALGY--TGFTVDDSFTELTARAVRAWQRDLGLPRTGRVG 157


>gi|254242677|ref|ZP_04935999.1| hypothetical protein PA2G_03440 [Pseudomonas aeruginosa 2192]
 gi|126196055|gb|EAZ60118.1| hypothetical protein PA2G_03440 [Pseudomonas aeruginosa 2192]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 379 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 431

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 432 PADGYPTPALLDRLRTP 448


>gi|126738028|ref|ZP_01753749.1| hypothetical protein RSK20926_05827 [Roseobacter sp. SK209-2-6]
 gi|126720525|gb|EBA17230.1| hypothetical protein RSK20926_05827 [Roseobacter sp. SK209-2-6]
          Length = 389

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 2/74 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GG P         G S   +++L+ +L   G       +     A    AV+  Q R G+
Sbjct: 318 GGEPVYQAGNPDQGLSGSQMKQLQRKLQALGH--DVGKVDGILGAKSRQAVQREQQRLGM 375

Query: 152 DPSGMVDSSTLEAM 165
                   + L  +
Sbjct: 376 PADAWPTPALLNRL 389


>gi|332264806|ref|XP_003281419.1| PREDICTED: matrix metalloproteinase-28 [Nomascus leucogenys]
          Length = 520

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGRLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|167645415|ref|YP_001683078.1| peptidoglycan-binding domain-containing protein [Caulobacter sp.
           K31]
 gi|167347845|gb|ABZ70580.1| Peptidoglycan-binding domain 1 protein [Caulobacter sp. K31]
          Length = 997

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  +   ++ L   G               +  A+  +Q    L  SG +D  TL  +  
Sbjct: 937 SAGLATAQKALSRLGYY--QGPQDGVASPALRMAIAAYQRDQSLPTSGALDGETLSRLAT 994


>gi|26249918|ref|NP_755958.1| general secretion pathway protein A [Escherichia coli CFT073]
 gi|227883454|ref|ZP_04001259.1| general secretion pathway protein A [Escherichia coli 83972]
 gi|300979894|ref|ZP_07174770.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301046094|ref|ZP_07193272.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|26110346|gb|AAN82532.1|AE016767_292 Probable general secretion pathway protein A [Escherichia coli
           CFT073]
 gi|227839598|gb|EEJ50064.1| general secretion pathway protein A [Escherichia coli 83972]
 gi|300301920|gb|EFJ58305.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300409405|gb|EFJ92943.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|307555410|gb|ADN48185.1| export protein A for general secretion pathway [Escherichia coli
           ABU 83972]
 gi|315292360|gb|EFU51712.1| conserved hypothetical protein [Escherichia coli MS 153-1]
          Length = 489

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 392 WKMSPEGESTITHDSSEEEILWLETMLNRA--LHISTESSAEWRPLLVEKIKQFQKSHHL 449

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 450 KTDGVVGFSTL 460


>gi|126463546|ref|YP_001044660.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17029]
 gi|126105210|gb|ABN77888.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17029]
          Length = 419

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 13/84 (15%)

Query: 89  LSRGGWPELPIRPLHLGNS---SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLF 145
              GGWP         G+    S     L+  L  +G    + G          SA++ +
Sbjct: 346 AIAGGWPR--------GDRALASAERTELQRLLTAAGF--DTGGADGMIGPNTLSALRAW 395

Query: 146 QMRHGLDPSGMVDSSTLEAMNVPV 169
           Q   GL   G  + + L  +    
Sbjct: 396 QAARGLVADGYANEAVLNRLREGA 419


>gi|224070919|ref|XP_002187592.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 572

 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A+   Q   GL  +G++D +TLE M  P
Sbjct: 29  LTKFGYLPPPDPVTGQLQTQEELTKAITAMQRFGGLKATGVLDEATLELMKTP 81


>gi|300785515|ref|YP_003765806.1| peptidoglycan binding protein [Amycolatopsis mediterranei U32]
 gi|299795029|gb|ADJ45404.1| putative peptidoglycan binding protein [Amycolatopsis mediterranei
           U32]
          Length = 320

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 8/102 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G     V  ++  L+ +        +  +F       V  FQ+  GL   G+VD +T  A
Sbjct: 152 GQHDECVTEVQNLLVAA---HGRLSVDGSFGPETLRRVTAFQVLAGLPARGVVDEATKTA 208

Query: 165 M---NVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA 203
           +      +      +     R++ +  +       +    + 
Sbjct: 209 LYDHRASMATWSAAMV--EQRVRAVFTEAPDTAVAIARCASF 248


>gi|298243549|ref|ZP_06967356.1| ErfK/YbiS/YcfS/YnhG family protein [Ktedonobacter racemifer DSM
           44963]
 gi|297556603|gb|EFH90467.1| ErfK/YbiS/YcfS/YnhG family protein [Ktedonobacter racemifer DSM
           44963]
          Length = 319

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 40/154 (25%), Gaps = 40/154 (25%)

Query: 198 VNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMA 257
           VN+    L A ENG V     +  GR +  TP     +     N  +  P  +       
Sbjct: 185 VNLSTQYLYAYENGAVVRSFPITSGRPELYTPAGTFTVLSKGANLTFYSPWPV------- 237

Query: 258 LLRQDPQYLKDNNIHMIDE-KGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFY 316
                P Y    ++    +     +++    W             PG  N          
Sbjct: 238 ---GSPYYYSPEHVDYALKLTTGGIYIHTAGWREYNDFG------PGTQNP-----HTLP 283

Query: 317 SRNNTYMHDTPEPILFNNVVRFETSGCV--RVRN 348
                    T             + GC+  RV +
Sbjct: 284 D-------GTQSTG---------SHGCINTRVSD 301


>gi|289208505|ref|YP_003460571.1| ErfK/YbiS/YcfS/YnhG family protein [Thioalkalivibrio sp. K90mix]
 gi|288944136|gb|ADC71835.1| ErfK/YbiS/YcfS/YnhG family protein [Thioalkalivibrio sp. K90mix]
          Length = 197

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWLLKDT 360
                 Y+H T E           + GCVR+RN  +I+L   L   T
Sbjct: 136 SYHRYIYIHGTDEEGRIGQP---ASEGCVRMRNDEVIELFPRLPVGT 179


>gi|298492601|ref|YP_003722778.1| polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
 gi|298234519|gb|ADI65655.1| Polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
          Length = 907

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 36/112 (32%), Gaps = 13/112 (11%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            ++ +G+ +    +  +      +    ++         A + +      P +S +    
Sbjct: 140 TVMALGIHVDTGSLTYNQ-----STPRDALALAWLMQQGASLSVISTYRDPGLSPQLQQL 194

Query: 78  TEKAIAFYQDILSRG---GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDP 126
             +A+   + +  RG    W  L       G S      L  +L+   ++D 
Sbjct: 195 LTEALENLEYLCLRGYTMAWVTLKTGAFVPGLSG-----LASKLVELTEIDA 241


>gi|254467082|ref|ZP_05080493.1| hypothetical protein RBY4I_3695 [Rhodobacterales bacterium Y4I]
 gi|206687990|gb|EDZ48472.1| hypothetical protein RBY4I_3695 [Rhodobacterales bacterium Y4I]
          Length = 548

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 24/173 (13%)

Query: 95  PELPIRPLHLGNSSV-SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GL- 151
           P+          ++   V+ +R  L  +G    S  +S   DA + + ++ FQ +  G  
Sbjct: 20  PKTGESKFKPVKNAPADVELVRLMLKANGY---SVEISTKCDAGLITMIRDFQKKKLGFK 76

Query: 152 DPSGMVDS--STLEAMNVPVD---------LRIRQLQVNLMRIKKLLEQKMGLRY-VLVN 199
            P G+VD    T  A    +           R+  ++    ++  + E + G        
Sbjct: 77  KPDGIVDPGMRTWNAGLPKLAAMHAADTKVERVEVVENGKTKLITVAEFEAGQEELRRKL 136

Query: 200 IPAASLEA------VENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
           +  A +        V+       +                 +     +P W  
Sbjct: 137 LAKAEMMYGQAESWVDFCNDVEHTRQGNETFLNALTEFAVSVVNDKTDPPWTP 189


>gi|206599910|ref|YP_002241715.1| gp30 [Mycobacterium phage Fruitloop]
 gi|206286998|gb|ACI12344.1| gp30 [Mycobacterium phage Fruitloop]
          Length = 332

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------GLDP 153
           L  G+ S  +++++  +        +   +  +D  + + V   Q R+        GL  
Sbjct: 10  LGPGDRSDEIRKIKAFMRRKFSYAATLADTEFYDEAMAAVVAEMQSRYNTAGQLRDGLYI 69

Query: 154 SGMVDSST 161
            G+V + T
Sbjct: 70  PGIVGAET 77


>gi|329940078|ref|ZP_08289360.1| Putative peptidoglycan binding domain 1 [Streptomyces
           griseoaurantiacus M045]
 gi|329300904|gb|EGG44800.1| Putative peptidoglycan binding domain 1 [Streptomyces
           griseoaurantiacus M045]
          Length = 458

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQK 190
                A + SAV+ +Q   GLDP+G++D +  +A+     +R+  L+             
Sbjct: 247 DGVLTASLMSAVERWQKAAGLDPTGVLDPA--DAVVAKSAVRVSGLRAQPGDEAADELMS 304

Query: 191 MGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMF 240
           +      V +P  SL+    G V     V V   DR T          + 
Sbjct: 305 LTSTTKTVTVPVESLDL---GSVSTGRRVTVVLPDRSTTPGRVAAISTVV 351


>gi|283852763|ref|ZP_06370027.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio sp. FW1012B]
 gi|283571844|gb|EFC19840.1| Peptidoglycan-binding domain 1 protein [Desulfovibrio sp. FW1012B]
          Length = 381

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 39/132 (29%), Gaps = 14/132 (10%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V   + RL   G       +    D   + ++K +Q   GL P      + L+ +     
Sbjct: 91  VADTQARLAGLGWYP--GPVDGRLDRMTKWSIKAYQTAVGLAPRPEASQALLDELARNPK 148

Query: 171 LRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVE----NGKVGLRSTVIVGRVDR 226
                L           E +    + +V  P    EA +    N K   R     G  + 
Sbjct: 149 PAPADL--------VFPEFRTEEVHDVVLSPERLAEARDFYAVNRKALARVRERYGVPEE 200

Query: 227 QTPILHSRINRI 238
               L +   R+
Sbjct: 201 YLVALLAVETRV 212


>gi|218508162|ref|ZP_03506040.1| putative hemaglutinin protein [Rhizobium etli Brasil 5]
          Length = 373

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           +++ ++  L  +G    +        A   +A+K FQ   G  P G V  +T++A+    
Sbjct: 309 AIRNIQAILNNNGF--DAGVPDGEMGAKTVTAIKNFQKSIGQAPDGKVTDATVKALLERN 366

Query: 170 DLRIRQL 176
               + +
Sbjct: 367 KQVAKAI 373


>gi|169351524|ref|ZP_02868462.1| hypothetical protein CLOSPI_02304 [Clostridium spiroforme DSM 1552]
 gi|169291746|gb|EDS73879.1| hypothetical protein CLOSPI_02304 [Clostridium spiroforme DSM 1552]
          Length = 492

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
             +V+ L++ L I G     K     F     +A+K F+  + L   G+
Sbjct: 412 DSNVKSLQKGLKILGY--DCKREDGYFSNETVAALKQFESTNNLTVDGI 458


>gi|27379491|ref|NP_771020.1| transglycolase [Bradyrhizobium japonicum USDA 110]
 gi|27352643|dbj|BAC49645.1| bll4380 [Bradyrhizobium japonicum USDA 110]
          Length = 409

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 20/62 (32%), Gaps = 3/62 (4%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNV 167
             VQ ++ RL  +G    + G           A+K FQ   G+    G      L  +  
Sbjct: 350 AEVQEMQTRLTKAGF--DTGGTDGRVGNDTMKAIKDFQQHAGITPADGYGGLKVLARLRQ 407

Query: 168 PV 169
             
Sbjct: 408 GP 409


>gi|325981398|ref|YP_004293800.1| peptidoglycan-binding domain 1 protein [Nitrosomonas sp. AL212]
 gi|325530917|gb|ADZ25638.1| Peptidoglycan-binding domain 1 protein [Nitrosomonas sp. AL212]
          Length = 170

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           ++ +++ L+ +G       +         +A++ FQ  +G+ P G +D  TL A+ V
Sbjct: 115 IRDIQQALVNAGF--NPGPVDGKSGGKTTAAIEAFQKENGITP-GKIDKRTLRALGV 168


>gi|145351115|ref|XP_001419931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580164|gb|ABO98224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 319

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 6/93 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G+S   V  L +RL   G            D     A++ +Q+  GL PSG   +S+   
Sbjct: 12  GDSGTDV-SLAQRL--LGRDARRA--HGVCDRETTEALRAWQISRGLKPSGFFGASSRAQ 66

Query: 165 MNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
           M +  + R R+L    +  +   E+        
Sbjct: 67  MAM-EEERWRELGGGALLERLWEEEARARDASE 98


>gi|126174804|ref|YP_001050953.1| lytic murein transglycosylase [Shewanella baltica OS155]
 gi|125998009|gb|ABN62084.1| lytic murein transglycosylase [Shewanella baltica OS155]
          Length = 411

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+ +L  +G                 + ++ FQ    
Sbjct: 335 NGGLPLTVSPPEQPRLSREQVKQLQAKLNEAGF--DVGKPDGVLGRNSVAGLQAFQRSKQ 392

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 393 MIADGFPSPEVFSALGLS 410


>gi|152985260|ref|YP_001346502.1| putative lipoprotein [Pseudomonas aeruginosa PA7]
 gi|150960418|gb|ABR82443.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
          Length = 448

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 5/80 (6%)

Query: 91  RGGWPELPIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMR 148
           +GG   +   PL     + S  +  L+++L   G       +     A    A++  Q  
Sbjct: 372 KGGGRIVAAWPLEDVPLSRSQRI-ELQQQLAARGH--DPGAVDGIIGANTRKAIRACQQE 428

Query: 149 HGLDPSGMVDSSTLEAMNVP 168
            G    G    + L+ +  P
Sbjct: 429 FGWPADGYPTPALLDRLRTP 448


>gi|114332050|ref|YP_748272.1| peptidoglycan binding domain-containing protein [Nitrosomonas
           eutropha C91]
 gi|114309064|gb|ABI60307.1| Peptidoglycan-binding domain 1 protein [Nitrosomonas eutropha C91]
          Length = 194

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++++++ L  +G                ++A+  FQ +HGL   G +   TL  + + 
Sbjct: 139 IRKIQKALKDAGL--NPGAADGMMGPRTQNALVDFQKQHGLAE-GKITKETLRELGIT 193


>gi|116492161|ref|YP_803896.1| hypothetical protein PEPE_0358 [Pediococcus pentosaceus ATCC 25745]
 gi|116102311|gb|ABJ67454.1| hypothetical protein PEPE_0358 [Pediococcus pentosaceus ATCC 25745]
          Length = 221

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 28/108 (25%), Gaps = 13/108 (12%)

Query: 271 IHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDT---- 326
             M    G             +     F  +P      A   + F   +  Y+  T    
Sbjct: 118 YTMYASTGSHESPTPTGTFKIQAERGDFFYNPTSKEG-AKYWVSF-KDHGIYLFHTVPTD 175

Query: 327 -PEPILFNN----VVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIE 369
                L +         ++ GCVR+        W+ +  P   +  I 
Sbjct: 176 KNGKFLEDEAEQLGKEAQSHGCVRLAVPD--AKWIYEKVPEGMKVEIH 221


>gi|118098430|ref|XP_415092.2| PREDICTED: similar to membrane-type-4 matrix metalloproteinase
           [Gallus gallus]
          Length = 592

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 20/113 (17%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP------- 168
           L   G L P   ++        +  A+   Q   GL+ +G++D +TLE M  P       
Sbjct: 50  LTKFGYLPPPDPITGQLQTQEELTKAITAMQRFGGLEATGVLDEATLELMKTPRCSLPDM 109

Query: 169 --VDLRIRQLQVNL---------MRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
                R ++    +          R++   ++       +  +   +L+   +
Sbjct: 110 AGPAARRKRHTQAVTKWNKRNLSWRVRTFPKESHLGHDTVRALMYYALKVWSD 162


>gi|260459702|ref|ZP_05807956.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034504|gb|EEW35761.1| ErfK/YbiS/YcfS/YnhG family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 142

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/63 (14%), Positives = 17/63 (26%), Gaps = 4/63 (6%)

Query: 310 STKIEF-YSRNNTYMHDTPE---PILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSR 365
           S K        + + H             + R  + GCVR+        + +     +  
Sbjct: 76  SRKYHMSPMPYSVFFHGGYAIHGTGAVRQLGRPASHGCVRLHTANAAAFYSMVREVGFGN 135

Query: 366 YHI 368
             I
Sbjct: 136 TRI 138


>gi|325123472|gb|ADY82995.1| transglycosylase, putative [Acinetobacter calcoaceticus PHEA-2]
          Length = 393

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 324 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 381

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 382 AFRQEQAQKMMQ 393


>gi|271969741|ref|YP_003343937.1| peptidoglycan binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
 gi|270512916|gb|ACZ91194.1| peptidoglycan binding domain-containing protein [Streptosporangium
           roseum DSM 43021]
          Length = 587

 Score = 38.9 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
           R +  G +   V++L+  L   G       ++  FD+   +AV+ +  + G
Sbjct: 117 RTMAPGTTGADVRQLQTALRRLGF---GAPVTGVFDSATTAAVQRWYAKRG 164


>gi|327269601|ref|XP_003219582.1| PREDICTED: matrix metalloproteinase-16-like [Anolis carolinensis]
          Length = 610

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P+            ++SA+   Q  +G++ +G VD +T++ M  P      Q
Sbjct: 49  LQKYGYLPPTDPRMSVLRTAETMKSAIAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQ 108

Query: 176 LQVN 179
            + N
Sbjct: 109 TRGN 112


>gi|194435137|ref|ZP_03067372.1| probable general secretion pathway protein A [Shigella dysenteriae
           1012]
 gi|194416634|gb|EDX32768.1| probable general secretion pathway protein A [Shigella dysenteriae
           1012]
 gi|332085960|gb|EGI91124.1| putative peptidoglycan binding domain protein [Shigella dysenteriae
           155-74]
          Length = 406

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 94  WPELPIR--PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           W   P     +   +S   +  L   L  +  L  S   S  +   +   +K FQ  H L
Sbjct: 309 WKMSPEGESTITCDSSEEEILWLETMLNRA--LHISTEPSAEWRPLLVEKIKQFQKSHHL 366

Query: 152 DPSGMVDSSTL 162
              G+V  STL
Sbjct: 367 KTDGVVGFSTL 377


>gi|218674837|ref|ZP_03524506.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli GR56]
          Length = 318

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  ++++L+  G    +            +A+  FQ   G+  +G      L A+     
Sbjct: 147 VMGIQQQLVRRGLY--NGVPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAALKTDAA 204


>gi|160935588|ref|ZP_02082963.1| hypothetical protein CLOBOL_00478 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441332|gb|EDP19042.1| hypothetical protein CLOBOL_00478 [Clostridium bolteae ATCC
           BAA-613]
          Length = 674

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 14/57 (24%), Gaps = 4/57 (7%)

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +  K           HD      F         + GCV +      +L   +    P
Sbjct: 501 SPVKFWMPFNGGIGFHDASWRSSFGGSIYKNGGSHGCVNMPYDKAKELFENVYAGMP 557


>gi|114766698|ref|ZP_01445637.1| Membrane-bound lytic murein transglycosylase B [Pelagibaca
           bermudensis HTCC2601]
 gi|114541088|gb|EAU44143.1| Membrane-bound lytic murein transglycosylase B [Roseovarius sp.
           HTCC2601]
          Length = 415

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 2/84 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D L+ GG       P   G +    + L+  L  +G           F +  E+ ++
Sbjct: 333 HLSDRLAGGGPVRGTFPPDRYGFTIDERKELQALLNRAGY--DVGTPDGVFGSKTEAGIR 390

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNV 167
            +Q R GL  +G    + L+ +  
Sbjct: 391 SYQARAGLAVTGEPSQALLQQLRR 414


>gi|73995001|ref|XP_852332.1| PREDICTED: similar to matrix metalloproteinase 17 preproprotein
           [Canis familiaris]
          Length = 661

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 3/63 (4%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            + V  +   L   G L P+   +        +  A+   Q   GL+ +G++D +TL  M
Sbjct: 108 DLRVAEMEW-LSRFGYLPPADSTTGQLQTQEELSKAIAAMQRFGGLEATGILDVATLALM 166

Query: 166 NVP 168
             P
Sbjct: 167 KTP 169


>gi|13471570|ref|NP_103136.1| transglycolase [Mesorhizobium loti MAFF303099]
 gi|14022312|dbj|BAB48922.1| probable transglycolase [Mesorhizobium loti MAFF303099]
          Length = 392

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 7/92 (7%)

Query: 74  TIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVA 133
           T A T   +A         G P L  R    G ++  ++ L+ +L   G       +   
Sbjct: 308 TYALTAANLA-----ARLAGAPALDPRNPDQGLNNEQMKALQTKLEARGY--DVGTVDGI 360

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                  A++  Q+R GL   G      L  +
Sbjct: 361 LGTNTREAIRKEQIRLGLPVDGWPTPELLAKL 392


>gi|147904008|ref|NP_001079285.1| matrix metalloproteinase-21 precursor [Xenopus laevis]
 gi|50400815|sp|O93470|MMP21_XENLA RecName: Full=Matrix metalloproteinase-21; Short=MMP-21;
           Short=xMMP; Flags: Precursor
 gi|3211705|gb|AAC21447.1| matrix metalloproteinase [Xenopus laevis]
          Length = 604

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
              +            A+K FQ  + L  +G +D +T+ AMN P
Sbjct: 90  PRQEVAEPTKSPQFIDALKKFQKLNNLPVTGTLDDATINAMNKP 133


>gi|301605887|ref|XP_002932554.1| PREDICTED: matrix metalloproteinase-9-like [Xenopus (Silurana)
           tropicalis]
          Length = 684

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 97  LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGM 156
           +    +    +SV V      L+  G L   +G S      ++ A+   Q + GL  +G 
Sbjct: 31  IFPGEIRSNMTSVEVAE--WYLVKFGYLPLQQGPSNHH-VSIKKALSQMQRKLGLKVTGN 87

Query: 157 VDSSTLEAMNVP 168
           +D+ TLEAM  P
Sbjct: 88  LDAETLEAMKSP 99


>gi|254292546|ref|YP_003058569.1| peptidoglycan-binding protein [Hirschia baltica ATCC 49814]
 gi|254041077|gb|ACT57872.1| Peptidoglycan-binding domain 1 protein [Hirschia baltica ATCC
           49814]
          Length = 312

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
           +++L++ L   G    +  +         +AV+ FQ+R GL  +G +  +TLE + V  
Sbjct: 256 IRQLQQSLNNQGF--DAGTVDGQVGRQTLTAVRDFQLREGLP-TGGLTLATLERLGVNP 311


>gi|167758399|ref|ZP_02430526.1| hypothetical protein CLOSCI_00739 [Clostridium scindens ATCC 35704]
 gi|167664296|gb|EDS08426.1| hypothetical protein CLOSCI_00739 [Clostridium scindens ATCC 35704]
          Length = 571

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 41/179 (22%), Gaps = 57/179 (31%)

Query: 182 RIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRV--DRQTPILHSRINRIM 239
           R        +G  Y  V++    +  V+NG+V L+S ++ G       TP     +    
Sbjct: 432 RAASHEGNDVGSTYAEVDLSNQMMYFVQNGQVVLQSGIVTGNPNKGNGTPQGVYSLAYKA 491

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
            +                               ++    K                + + 
Sbjct: 492 LD------------------------------QVLRGTKKP------------DGTYEYE 509

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRVRNIIDLDVWL 356
                       K           HD      F         + GCV +    D+   L
Sbjct: 510 TP---------VKFWMPFNGGIGFHDATWQSSFGGSRYQTNGSHGCVNL--PYDVAAQL 557


>gi|187736252|ref|YP_001878364.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187426304|gb|ACD05583.1| ErfK/YbiS/YcfS/YnhG family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 285

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 50/175 (28%), Gaps = 44/175 (25%)

Query: 197 LVNIPAASLEAVENGKVGLRSTV---IVGRVDR----QTPILHSRINRIMFNPYWVIPRS 249
           +V++    +  + NG+V     V     G  DR    +TP+   RI   +       P+ 
Sbjct: 44  VVSVRDQKMAVMRNGRVVKTYPVSTSKFGLGDRKGSCRTPLGAHRIASKI---GSGQPKG 100

Query: 250 IIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR-QDPGKINAM 308
           ++ K                        G+ V       +            +P   NA 
Sbjct: 101 MVFKSRKP-------------------TGECVAPNSPGRDPIVTRIMWLEGLEPRNRNA- 140

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTP 361
                        Y+H T E           + GCVR+   ++ +    L    P
Sbjct: 141 --------HSRLIYIHGTAEERTIGTP---ASYGCVRMTSNDVYEAFNLLRTGDP 184


>gi|33592814|ref|NP_880458.1| putative peptidoglycan-binding protein [Bordetella pertussis Tohama
           I]
 gi|33572462|emb|CAE42032.1| putative peptidoglycan-binding protein [Bordetella pertussis Tohama
           I]
 gi|332382227|gb|AEE67074.1| putative peptidoglycan-binding protein [Bordetella pertussis CS]
          Length = 409

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + L+E L+  G                  A++  Q + GL   G     TL+
Sbjct: 347 PGLSRAERRELQELLLARGF--DIGKPDGVIGVRTRQALQTVQGQLGLPADGRAGQKTLK 404

Query: 164 AMNVP 168
           A+  P
Sbjct: 405 ALRTP 409


>gi|332839031|ref|XP_001154045.2| PREDICTED: matrix metalloproteinase-19 [Pan troglodytes]
          Length = 505

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|300113590|ref|YP_003760165.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
 gi|299539527|gb|ADJ27844.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosococcus watsonii C-113]
          Length = 217

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 5/38 (13%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN--IIDLDVWL 356
            Y+H  P+  +        + GC+R+ N  +++L   +
Sbjct: 174 IYIHGVPDAAVMG---LPGSHGCIRIHNGPVLELFKQV 208


>gi|294675803|ref|YP_003576418.1| membrane-bound lytic murein transglycosylase B [Rhodobacter
           capsulatus SB 1003]
 gi|294474623|gb|ADE84011.1| membrane-bound lytic murein transglycosylase B [Rhodobacter
           capsulatus SB 1003]
          Length = 419

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 7/75 (9%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
            WP    R L    +      ++  L   G    +KG      A    AV  +Q  HG+ 
Sbjct: 351 PWPR-EGRAL----TDAEKVEVQRLLTAQGY--DTKGTDGLIGAGTIGAVMDYQRDHGMT 403

Query: 153 PSGMVDSSTLEAMNV 167
           P+G V    LE++  
Sbjct: 404 PNGWVTIKLLESLRK 418


>gi|116253070|ref|YP_768908.1| lytic transglycosylase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257718|emb|CAK08816.1| putative lytic transglycosylase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 405

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 13/147 (8%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
              +G+   +       L+  +       +   F        + ++      +K  I  T
Sbjct: 272 WFALGVKPRDGNTAFGDLEGDLVLPQGR-MGPAF-IAYPNFKIYLE-----WNKSFIYTT 324

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             A   Y      G  P L   P   G +S  ++ L+ +L   G       +     +  
Sbjct: 325 SAA---YFGTRLSGAEPYLKGVP-EQGLASDQMKALQTKLQSLGH--DVGEIDGILGSGT 378

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             A++  Q R G+   G    + L A+
Sbjct: 379 RVAIQKEQQRLGMPADGWATPALLNAL 405


>gi|328724695|ref|XP_003248224.1| PREDICTED: matrix metalloproteinase-16-like isoform 3
           [Acyrthosiphon pisum]
          Length = 583

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 118 LIISGDLDPSKGLSV----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L PS           +  +  A+  FQ   GL+ +G +D  TL  M++P     
Sbjct: 38  LSQFGYLSPSMKNPNSGHIMSEETMARALMEFQSFVGLNLTGHLDDETLHYMSMPRCGVR 97

Query: 169 ------VDLRIRQLQVNLMRIK 184
                  D R R+  +   R +
Sbjct: 98  DKVGFATDSRSRRYALQGSRWR 119


>gi|302036308|ref|YP_003796630.1| hypothetical protein NIDE0941 [Candidatus Nitrospira defluvii]
 gi|300604372|emb|CBK40704.1| conserved exported protein of unknown function, contains von
           Willebrand factor, type A and vault protein
           inter-alpha-trypsin domain [Candidatus Nitrospira
           defluvii]
          Length = 712

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            I+    S+    I  +    +          DRF+         + S  PI    T   
Sbjct: 359 FIIDRSGSMAGASIEQAK-GSLTAALSRLTTQDRFNIIQFNHT--VRSLFPIPQPVTTKS 415

Query: 78  TEKAIAFYQDILSRGGWPELPI--RPLHLGNSSVSVQRLRERLIISG 122
            ++AI + + + + GG   LP   + L     S  +Q++   LI  G
Sbjct: 416 MQQAIRYTEHLAADGGTEILPALRQALKSPQDSARLQQI--ILITDG 460


>gi|294851948|ref|ZP_06792621.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
 gi|294820537|gb|EFG37536.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
          Length = 338

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|255319277|ref|ZP_05360494.1| secretion activator protein [Acinetobacter radioresistens SK82]
 gi|255303670|gb|EET82870.1| secretion activator protein [Acinetobacter radioresistens SK82]
          Length = 255

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 20/107 (18%)

Query: 82  IAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESA 141
           +A  ++I  R  W +L    L       ++           D   + G S         A
Sbjct: 143 LAEAKEIYRRDWWEKLGAEQL-----HSAIV------FQLWDFAVNAGKS--------RA 183

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLE 188
           +K  Q   G+   G++   T+ A+N  +DL    L +   R+K   +
Sbjct: 184 IKELQQVAGVPADGIIGPKTIAAVNA-MDLNDVLLTLTAERLKFYTD 229


>gi|325981114|ref|YP_004293516.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
 gi|325530633|gb|ADZ25354.1| ErfK/YbiS/YcfS/YnhG family protein [Nitrosomonas sp. AL212]
          Length = 159

 Score = 38.9 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVW 355
            Y+H TP+ +         + GC+R+RN  DL   
Sbjct: 115 IYIHGTPDSVEMGKPG---SIGCIRMRN-SDLVEL 145


>gi|213512999|ref|NP_001133929.1| Matrix metalloproteinase-9 [Salmo salar]
 gi|209155852|gb|ACI34158.1| Matrix metalloproteinase-9 precursor [Salmo salar]
          Length = 671

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 9/118 (7%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             P   L    +   +      L   G ++               A+   Q + GL+ +G
Sbjct: 29  TFPGDVLK-NMTDTELAE--SYLKKFGYMNVQHRSGFQSMVSTSKALMTMQRQMGLEETG 85

Query: 156 MVDSSTLEAMNVP--VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVN-IPAASLEAVEN 210
            +D ST+ AM  P      +R  Q     +K        + Y ++N  P      +++
Sbjct: 86  TLDKSTVAAMKAPRCGVPDVRSYQTFEGDLKW---DHHDITYRILNYSPDMVASLIDD 140


>gi|114799549|ref|YP_762022.1| lytic murein transglycosylase [Hyphomonas neptunium ATCC 15444]
 gi|114739723|gb|ABI77848.1| lytic murein transglycosylase [Hyphomonas neptunium ATCC 15444]
          Length = 434

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 13/85 (15%)

Query: 88  ILSRGG----WPE-LPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
           I  +GG    WP  LP  PL +      ++ L+  L   G    +           ++A+
Sbjct: 352 IAGKGGPVASWPTHLP--PLTV----ADIRDLQTSLNALGY--DAGTPDGIAGRRTKTAL 403

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
           + FQ   G    G      L A+  
Sbjct: 404 QNFQKARGFLADGYPTQEMLAAVKA 428


>gi|190890254|ref|YP_001976796.1| hemaglutinin protein [Rhizobium etli CIAT 652]
 gi|190695533|gb|ACE89618.1| putative hemaglutinin protein [Rhizobium etli CIAT 652]
          Length = 1253

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 2/67 (2%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            +++ ++  L  +G    +        A   +A+K FQ   G  P G V  +T++A+    
Sbjct: 1189 AIRNIQAILNNNGF--DAGVPDGEMGAKTVTAIKNFQKSIGQAPDGKVTDATVKALLERN 1246

Query: 170  DLRIRQL 176
                + +
Sbjct: 1247 KQVAKAI 1253


>gi|213623846|gb|AAI70300.1| Matrix metalloproteinase 21 [Xenopus laevis]
 gi|213627655|gb|AAI70298.1| Matrix metalloproteinase 21 [Xenopus laevis]
          Length = 604

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
                A+K FQ  + L  +G +D +T+ AMN P
Sbjct: 101 PQFIDALKKFQKLNNLPVTGTLDDATINAMNKP 133


>gi|194217260|ref|XP_001917946.1| PREDICTED: matrix metallopeptidase 28, partial [Equus caballus]
          Length = 501

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G LD     +        SA++ FQ    L  SG++D +TL  M  P
Sbjct: 21  LEKYGYLDEQASRAPT-STQFSSAIREFQWVSQLPVSGVLDPATLRQMMRP 70


>gi|111226115|ref|YP_716909.1| hypothetical protein FRAAL6784 [Frankia alni ACN14a]
 gi|111153647|emb|CAJ65407.1| hypothetical protein FRAAL6784 [Frankia alni ACN14a]
          Length = 274

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 22/78 (28%), Gaps = 13/78 (16%)

Query: 101 PLHLGNSSVSVQRLRERLIIS-------GDLDPSKGLSVAFDAYVESAVKLFQM----RH 149
            L  G     V  L+  L I        GD         A+     + V   Q       
Sbjct: 188 TLREGARGADVVELQNALNIVFGHEAPIGD-PNRISPDGAYGPRTTARVASLQRYASPWF 246

Query: 150 G-LDPSGMVDSSTLEAMN 166
           G +   G+  ++T   + 
Sbjct: 247 GRIPDDGVCGTNTWRKIG 264


>gi|49473830|ref|YP_031872.1| peptidoglycan-binding protein [Bartonella quintana str. Toulouse]
 gi|49239333|emb|CAF25666.1| Peptidoglycan-binding protein [Bartonella quintana str. Toulouse]
          Length = 418

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           + L+ RL   G       +          A+K FQ+ H L+ +G
Sbjct: 364 KELQSRLAALGYYKGE--VDGKIGIGSRKAIKAFQLHHSLEANG 405


>gi|307945426|ref|ZP_07660762.1| lytic murein transglycosylase [Roseibium sp. TrichSKD4]
 gi|307771299|gb|EFO30524.1| lytic murein transglycosylase [Roseibium sp. TrichSKD4]
          Length = 394

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 2/74 (2%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           GG P         G +   +++L+ +L   G       +     A    AV+  Q + GL
Sbjct: 323 GGAPVYNKGNPDKGLNDAQMKQLQTKLRAMGY--DVGKIDGILGAGTRGAVQDVQKKLGL 380

Query: 152 DPSGMVDSSTLEAM 165
                   + L  +
Sbjct: 381 PADAWPTPTLLNKL 394


>gi|296387479|ref|ZP_06876954.1| lytic murein transglycosylase [Pseudomonas aeruginosa PAb1]
          Length = 382

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 7/77 (9%)

Query: 92  GGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           G WP L   PL   + S  +  L+ +L   G       +     A    A++  Q   G 
Sbjct: 313 GAWP-LEDVPL---SRSQRI-ELQRQLAARGH--DPGAVDGIIGANTRKAIRACQQEFGW 365

Query: 152 DPSGMVDSSTLEAMNVP 168
              G    + L+ +  P
Sbjct: 366 PADGYPTPALLDRLRTP 382


>gi|217972932|ref|YP_002357683.1| lytic murein transglycosylase [Shewanella baltica OS223]
 gi|217498067|gb|ACK46260.1| lytic murein transglycosylase [Shewanella baltica OS223]
          Length = 436

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+ +L  +G                 + ++ FQ    
Sbjct: 360 NGGLPLTVSPPEQPRLSREQVKQLQAKLNEAGF--DVGKPDGVLGRNSVAGLQAFQRSKQ 417

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 418 MIADGFPSPEVFTALGLS 435


>gi|109127347|ref|XP_001091146.1| PREDICTED: matrix metalloproteinase-25 [Macaca mulatta]
          Length = 562

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P           A +  A+K+ Q   GL  +G +D  T+  M  P
Sbjct: 36  LTRYGYLPPPNPAQAQLQSPAKLRDAIKVMQRFAGLPETGRMDPETVATMRKP 88


>gi|319957198|ref|YP_004168461.1| lytic murein transglycosylase [Nitratifractor salsuginis DSM 16511]
 gi|319419602|gb|ADV46712.1| lytic murein transglycosylase [Nitratifractor salsuginis DSM 16511]
          Length = 397

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           S   +Q L+  L   G       +          AVK  Q + GL   G      L  + 
Sbjct: 340 SGRQIQTLQRLLAKRGY--DVGKIDGIIGEKTRLAVKDLQKKLGLPADGYPTQELLRRLR 397


>gi|260828369|ref|XP_002609136.1| hypothetical protein BRAFLDRAFT_126164 [Branchiostoma floridae]
 gi|229294490|gb|EEN65146.1| hypothetical protein BRAFLDRAFT_126164 [Branchiostoma floridae]
          Length = 778

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 19/34 (55%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D   + A++ FQ  + L  +G++D +T   MN P
Sbjct: 243 DEEFKEAIRKFQQANNLTITGLLDDATRNKMNEP 276


>gi|319947668|ref|ZP_08021886.1| hypothetical protein ES5_00180 [Dietzia cinnamea P4]
 gi|319438658|gb|EFV93560.1| hypothetical protein ES5_00180 [Dietzia cinnamea P4]
          Length = 313

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGK 304
            + R+      M      P +   N I+   ++G++V              F  R + G 
Sbjct: 183 TVTRNGQHVRTMRASAGRPGWDTYNGIYYTGQRGRQV--------RMNSETFGLRIEEGG 234

Query: 305 INAMASTKIEFYSRNNTYMHDTPEPILF-NNVVRFETSGCVRVRNIIDLDVW 355
            N++ +  +     +  Y+H    P    +  VR  + GC+ V    D   W
Sbjct: 235 YNSIVNDAVRLSY-DGIYIH--SAPWSVADQGVRNVSHGCINVS-PED-ARW 281


>gi|297184320|gb|ADI20437.1| membrane-bound lytic murein transglycosylase b [uncultured alpha
           proteobacterium EB080_L43F08]
          Length = 410

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP  P   L           L+  L   G                 +A++ FQ+  GL P
Sbjct: 342 WPRGP-GALKF----KEKVELQNLLNKLGYEVGEA--DGIIGPNSIAAIRKFQISVGLIP 394

Query: 154 SGMVDSSTLEAMNV 167
            GM +   L  M  
Sbjct: 395 DGMSNKDLLLKMQK 408


>gi|298527994|ref|ZP_07015398.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511646|gb|EFI35548.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 412

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           +  RL   G L  +       +  +E A+K+FQ   GL+PSG   + T + +
Sbjct: 358 IASRLHELGFLKNA---DNKCEEKLEEALKIFQHTRGLNPSGQWSAETQKKL 406


>gi|114769612|ref|ZP_01447222.1| Membrane bound lytic murein transglycosylase B [alpha
           proteobacterium HTCC2255]
 gi|114549317|gb|EAU52199.1| Membrane bound lytic murein transglycosylase B [alpha
           proteobacterium HTCC2255]
          Length = 410

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP  P   L           L+  L   G                 +A++ FQ+  GL P
Sbjct: 342 WPRGP-GALKF----KEKVELQNLLNKLGYEVGEA--DGIIGPNSIAAIRKFQISVGLIP 394

Query: 154 SGMVDSSTLEAMNV 167
            GM +   L  M  
Sbjct: 395 DGMSNKDLLLKMQK 408


>gi|313901337|ref|ZP_07834824.1| peptidase, S41 family [Clostridium sp. HGF2]
 gi|312953945|gb|EFR35626.1| peptidase, S41 family [Clostridium sp. HGF2]
          Length = 493

 Score = 38.9 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 2/81 (2%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P L          S + +  +  L   G           F      A+K +Q   G+  +
Sbjct: 396 PVLKKEVYKPDTVSAAAKSAQIYLKFLGY--AVDRTDEYFSYASGEALKQYQKDKGMKVT 453

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G +D+ TL ++     L+   
Sbjct: 454 GNIDADTLTSLLSSCALKWHS 474


>gi|118588870|ref|ZP_01546278.1| hypothetical protein SIAM614_19229 [Stappia aggregata IAM 12614]
 gi|118438856|gb|EAV45489.1| hypothetical protein SIAM614_19229 [Stappia aggregata IAM 12614]
          Length = 152

 Score = 38.9 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 11/61 (18%)

Query: 316 YSRNNTY------MHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYH 367
               + +      +H T +      + R  + GCVR+   N   L   + K     +R  
Sbjct: 93  PMPYSIFFLGGYAIHGTTD---LKRLGRPASHGCVRLHPKNAAHLYNLVRKVGRAETRIV 149

Query: 368 I 368
           I
Sbjct: 150 I 150


>gi|224367795|ref|YP_002601958.1| putative general secretion pathway protein A [Desulfobacterium
           autotrophicum HRM2]
 gi|223690511|gb|ACN13794.1| putative general secretion pathway protein A [Desulfobacterium
           autotrophicum HRM2]
          Length = 581

 Score = 38.9 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 19/55 (34%), Gaps = 2/55 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
              +  L+  L   G    +      +D  V+ A+   Q  +G+   G+    T 
Sbjct: 508 GSQIINLKLLLKAIGFQGINLTAD--YDDRVKQAIIEIQSENGITVDGLAGPMTR 560


>gi|167755026|ref|ZP_02427153.1| hypothetical protein CLORAM_00530 [Clostridium ramosum DSM 1402]
 gi|237735249|ref|ZP_04565730.1| carboxy-terminal processing proteinase [Mollicutes bacterium D7]
 gi|167705076|gb|EDS19655.1| hypothetical protein CLORAM_00530 [Clostridium ramosum DSM 1402]
 gi|229380994|gb|EEO31085.1| carboxy-terminal processing proteinase [Coprobacillus sp. D7]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
             ++  +++ L I G           F      A+K F+  + L   G+  
Sbjct: 405 GTAIASMQKMLSILGY--DCGRNDGYFSQQSVEALKQFEQANNLTVDGIYT 453


>gi|332687298|ref|YP_004457071.1| hypothetical protein MPTP_1868 [Melissococcus plutonius ATCC 35311]
 gi|332371307|dbj|BAK22262.1| hypothetical protein MPTP_1868 [Melissococcus plutonius ATCC 35311]
          Length = 725

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 125 DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S+ L   +  + + AV+ FQ   GL P G + +  ++A+
Sbjct: 100 SGSEALDGMYTKFTKEAVEKFQKMAGLSPDGYLSTMLMKAL 140


>gi|268571949|ref|XP_002641192.1| C. briggsae CBR-ZMP-1 protein [Caenorhabditis briggsae]
          Length = 451

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L    G +      +  A+K  Q   GL+ +G +D  T   M  P
Sbjct: 28  LQKYGYLPR--GSNQLSSTSLSEALKNMQRMAGLEETGELDERTKRMMERP 76


>gi|254487251|ref|ZP_05100456.1| peptidoglycan binding domain protein [Roseobacter sp. GAI101]
 gi|214044120|gb|EEB84758.1| peptidoglycan binding domain protein [Roseobacter sp. GAI101]
          Length = 404

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 9/93 (9%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           +      IA  + I     WP +  R L        +  L+ RL   G    +  +    
Sbjct: 319 VGHLSDRIAGGRPIEQS--WP-VQDRALTF---DERI-ELQTRLTALGF--DTVKIDAKI 369

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                +AV+ FQ   G  P G      L+ +  
Sbjct: 370 GPLTINAVRRFQEAQGYLPDGYASLRLLDRVRA 402


>gi|209550890|ref|YP_002282807.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536646|gb|ACI56581.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 407

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 330 QIAGYGGMQQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 383 SAVQSRIGMQPDGEPSLPLLNALRR 407


>gi|75907904|ref|YP_322200.1| OpcA protein [Anabaena variabilis ATCC 29413]
 gi|75701629|gb|ABA21305.1| OpcA [Anabaena variabilis ATCC 29413]
          Length = 458

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           L   G    +  +        E+A++  Q+++ L  +G     TL  +      R
Sbjct: 65  LASLGFY--NGPIDGILGPQTETALRQVQIKYALPETGTATPETLAKLREEFVKR 117


>gi|4505213|ref|NP_002420.1| matrix metalloproteinase-19 isoform rasi-1 preproprotein [Homo
           sapiens]
 gi|12643345|sp|Q99542|MMP19_HUMAN RecName: Full=Matrix metalloproteinase-19; Short=MMP-19; AltName:
           Full=Matrix metalloproteinase RASI; AltName: Full=Matrix
           metalloproteinase-18; Short=MMP-18; Flags: Precursor
 gi|1731986|emb|CAA63299.1| MMP-19 (matrix metalloproteinase) [Homo sapiens]
 gi|2228244|gb|AAB63008.1| matrix metalloproteinase RASI-1 [Homo sapiens]
 gi|2253587|gb|AAC51521.1| matrix metalloproteinase RASI-1 [Homo sapiens]
 gi|29791916|gb|AAH50368.1| Matrix metallopeptidase 19 [Homo sapiens]
 gi|51234137|gb|AAT97983.1| matrix metalloproteinase 19 [Homo sapiens]
 gi|312153168|gb|ADQ33096.1| matrix metallopeptidase 19 [synthetic construct]
          Length = 508

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|1702930|emb|CAA69913.1| matrix metalloproteinase [Homo sapiens]
          Length = 508

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      S  F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 32  LSQYGYLQKPLEGSNNFKPEDITEALRAFQEASELPVSGQLDDATRARMRQP 83


>gi|23006315|ref|ZP_00048690.1| COG3409: Putative peptidoglycan-binding domain-containing protein
           [Magnetospirillum magnetotacticum MS-1]
          Length = 78

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             +V R++  L   G                ++A++ F+    L   G     TL A+  
Sbjct: 11  DPTVIRVQRALAKLGY--GPLKDDGLMGPGTKAAIEKFERDRKLPVKGEAAGPTLRALTR 68

Query: 168 PVDLRI 173
            +  + 
Sbjct: 69  EMTAKA 74


>gi|315125333|ref|YP_004067336.1| hypothetical protein PSM_A0229 [Pseudoalteromonas sp. SM9913]
 gi|315013846|gb|ADT67184.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 115 RERLIISGDLDPSK------GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           R  L+  G L             V +D     A++ +Q    L  +G+ D +T ++++  
Sbjct: 296 RMNLVCLGYLKNQPNYEEFETEDVKYDRQTVLALREYQQEKSLKVTGLADETTKKSLDDS 355


>gi|269126835|ref|YP_003300205.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
 gi|268311793|gb|ACY98167.1| ErfK/YbiS/YcfS/YnhG family protein [Thermomonospora curvata DSM
           43183]
          Length = 411

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 53/195 (27%), Gaps = 31/195 (15%)

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKD 268
           + G+        V   + +T  +  ++N             I       ++     YL  
Sbjct: 230 DFGRKFRIGDAHVSIANAKTKQMVVKVNGKTVKK-----TPISAGKGGRVVNGVDTYLTT 284

Query: 269 NNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS-----RNNTYM 323
           + IH+   K   V     +W   +P +           A     +          +  Y+
Sbjct: 285 SGIHLTMSK-HRVERMTSEWMGVDPKDK----------ANGGYDLLLPHAVRISSSGEYV 333

Query: 324 HDTPEP-ILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKL 382
           H +P+    F  V    + GC+          W    T          V+ T  T  +  
Sbjct: 334 HASPDRYWAFGRVN--ASHGCI--NTPPPFAEWFYNLTYRGDI-----VIVTGTTRRLPW 384

Query: 383 ATEVPVHFVYISAWS 397
                 + +  S W 
Sbjct: 385 NNGWSYYEMPWSQWV 399


>gi|261419216|ref|YP_003252898.1| peptidoglycan-binding protein [Geobacillus sp. Y412MC61]
 gi|297530814|ref|YP_003672089.1| peptidoglycan-binding protein [Geobacillus sp. C56-T3]
 gi|319766032|ref|YP_004131533.1| peptidoglycan-binding protein [Geobacillus sp. Y412MC52]
 gi|261375673|gb|ACX78416.1| Peptidoglycan-binding domain 1 protein [Geobacillus sp. Y412MC61]
 gi|297254066|gb|ADI27512.1| Peptidoglycan-binding domain 1 protein [Geobacillus sp. C56-T3]
 gi|317110898|gb|ADU93390.1| Peptidoglycan-binding domain 1 protein [Geobacillus sp. Y412MC52]
          Length = 168

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 6/58 (10%)

Query: 111 VQRLRERLIIS--GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V  ++  L  +  G       +   + +   + V  FQ   G+   G+V   T E   
Sbjct: 51  VLAIQRMLKDTPWGY----SAVDGYWGSKTYNGVVNFQRNEGIAADGIVGPVTWEEFE 104


>gi|71908465|ref|YP_286052.1| hypothetical protein Daro_2852 [Dechloromonas aromatica RCB]
 gi|71848086|gb|AAZ47582.1| hypothetical protein Daro_2852 [Dechloromonas aromatica RCB]
          Length = 335

 Score = 38.5 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 117 RLIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           RL+  G       +     F     + +K FQ   GL  +G+     L  +
Sbjct: 283 RLLQLGMSGRGVAIKADGIFGQTSVNLLKRFQASQGLPANGIATPQQLSEL 333


>gi|330891787|gb|EGH24448.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. mori str.
           301020]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGTADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|222147979|ref|YP_002548936.1| hypothetical protein Avi_1306 [Agrobacterium vitis S4]
 gi|221734967|gb|ACM35930.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 374

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 2/67 (2%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +      ++ +LI  G  D +           ++A+  +Q R G+  +G      L AM+
Sbjct: 133 TDPLTASIQAQLIRLGLYDGAA--DGKRGPRTDAAISAYQRRIGMSVTGAPSDDLLAAMS 190

Query: 167 VPVDLRI 173
           V      
Sbjct: 191 VDQKSPA 197


>gi|217979650|ref|YP_002363797.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocella silvestris BL2]
 gi|217505026|gb|ACK52435.1| N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
           [Methylocella silvestris BL2]
          Length = 255

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD-PSGMVDSSTLEA 164
           +    V+ L+  L   G       +S A+DA  +  ++ FQ         G+ D ST+  
Sbjct: 188 SRGAEVEELQAMLGAYGY---GAPVSGAYDARTQCVIRAFQRHFRPALVDGIADFSTVAT 244

Query: 165 MNVPVDLR 172
           +   + +R
Sbjct: 245 LRKLLAMR 252


>gi|328724693|ref|XP_003248223.1| PREDICTED: matrix metalloproteinase-16-like isoform 2
           [Acyrthosiphon pisum]
          Length = 557

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 118 LIISGDLDPSKGLSV----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L PS           +  +  A+  FQ   GL+ +G +D  TL  M++P     
Sbjct: 38  LSQFGYLSPSMKNPNSGHIMSEETMARALMEFQSFVGLNLTGHLDDETLHYMSMPRCGVR 97

Query: 169 ------VDLRIRQLQVNLMRIK 184
                  D R R+  +   R +
Sbjct: 98  DKVGFATDSRSRRYALQGSRWR 119


>gi|156349373|ref|XP_001622031.1| hypothetical protein NEMVEDRAFT_v1g142824 [Nematostella vectensis]
 gi|156208428|gb|EDO29931.1| predicted protein [Nematostella vectensis]
          Length = 216

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  VE+A+K FQ   GL+ +G +D +T+  M +P
Sbjct: 11  NQDVETAIKNFQRFAGLEVTGELDDATIAQMKMP 44


>gi|301752966|ref|XP_002912340.1| PREDICTED: matrix metalloproteinase-15-like [Ailuropoda
           melanoleuca]
          Length = 648

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 45  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 104

Query: 172 RIRQLQVNLMRIK 184
               ++ NL R +
Sbjct: 105 FGVHVKANLRRRR 117


>gi|255264816|ref|ZP_05344158.1| lytic murein transglycosylase [Thalassiobium sp. R2A62]
 gi|255107151|gb|EET49825.1| lytic murein transglycosylase [Thalassiobium sp. R2A62]
          Length = 369

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            ++  L   G       +   F    E+A++ FQ + G   +G   +S + A+ 
Sbjct: 318 AVQRGLERRGY--DIGTIDGVFGKKTEAAIRDFQQKQGFPVTGAASASLVSALR 369


>gi|218509677|ref|ZP_03507555.1| probable membrane-bound lytic murein transglycosylase protein
           [Rhizobium etli Brasil 5]
          Length = 71

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G ++  ++ L+ +L   G       +     +    A++  Q R G+ 
Sbjct: 1   GAPSYLKGAPEPGLANDQMKTLQTKLQSLGH--DVGEIDGILGSGTRIAIQKEQQRLGIP 58

Query: 153 PSGMVDSSTLEAM 165
             G    + L A+
Sbjct: 59  ADGWATPALLNAL 71


>gi|148255394|ref|YP_001239979.1| putative membrane-bound lytic transglycosylase protein signal
           peptide [Bradyrhizobium sp. BTAi1]
 gi|146407567|gb|ABQ36073.1| Putative membrane-bound lytic transglycosylase precursor protein,
           putative signal peptide [Bradyrhizobium sp. BTAi1]
          Length = 406

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNV 167
             VQ +++RL  +G    + G           A++ FQ + GL    G      L  +  
Sbjct: 347 AEVQEMQKRLTAAGF--DTGGTDGRVGNDTMKAIRDFQAKAGLTPADGYGGLKVLAKLRQ 404


>gi|297272408|ref|XP_002800423.1| PREDICTED: matrix metalloproteinase-28 isoform 2 [Macaca mulatta]
          Length = 510

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WDRLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|30061802|ref|NP_835973.1| IS629 orfB [Shigella flexneri 2a str. 2457T]
 gi|30040044|gb|AAP15778.1| IS629 orfB [Shigella flexneri 2a str. 2457T]
          Length = 215

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 37/121 (30%), Gaps = 15/121 (12%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLR--ERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            +  W   P   +H  +       L   +RL  +G L  +     ++D  +  ++     
Sbjct: 98  EQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESI----- 152

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            +GL  + ++   + +        R       L  +     +++  R   +    A    
Sbjct: 153 -NGLYKAKVIHRKSWK-------NRAEVELATLTWVDWYNNRRLPERLGHIPPAEAEKAY 204

Query: 208 V 208
            
Sbjct: 205 Y 205


>gi|84685464|ref|ZP_01013362.1| hypothetical protein 1099457000258_RB2654_11363 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666621|gb|EAQ13093.1| hypothetical protein RB2654_11363 [Rhodobacterales bacterium
           HTCC2654]
          Length = 397

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G SS  ++ L+++L   G       +     +   +AV+  Q+R GL 
Sbjct: 327 GAPVYDAGNPEPGLSSGQMKALQQKLQARGH--DVGKIDGILGSGTRAAVQAEQVRLGLP 384

Query: 153 PSGMVDSSTLEAM 165
                 ++ L A+
Sbjct: 385 ADAWPTAALLNAL 397


>gi|71734551|ref|YP_273050.1| type III helper protein HopAJ1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555104|gb|AAZ34315.1| type III helper protein HopAJ1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGTADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|170078482|ref|YP_001735120.1| bacteriophage endolysin [Synechococcus sp. PCC 7002]
 gi|169886151|gb|ACA99864.1| bacteriophage endolysin with peptidoglycan binding domain
           [Synechococcus sp. PCC 7002]
          Length = 202

 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
               +   V+  ++++   G    S  +   +    E   +  Q + GL+  G++   T 
Sbjct: 136 RPYMAGHDVREWQKQVNFWG---ISIEIDGIYGPESEKVCRTLQEKWGLEVDGVIGPITW 192

Query: 163 EAMNVPVDL 171
           E    P   
Sbjct: 193 ERTFKPSRE 201


>gi|327193899|gb|EGE60774.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli CNPAF512]
          Length = 318

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  ++++L+  G    +            +A+  FQ   G+  +G      L A+     
Sbjct: 147 VMGIQQQLVRRGLY--NGIPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAALKTDAA 204


>gi|255552738|ref|XP_002517412.1| Matrix metalloproteinase, putative [Ricinus communis]
 gi|223543423|gb|EEF44954.1| Matrix metalloproteinase, putative [Ricinus communis]
          Length = 321

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLS-------VAFDAYVESAVKLFQMRHGLDPSGMV 157
           G+    V  L++ L   G L  +K  S         FD  +ESA++ +Q+ + L+ SG++
Sbjct: 47  GDKLKGVGELKKYLKHFGYLSYNKNQSHANEDDDDDFDDPLESAIRTYQLNYHLNVSGLL 106

Query: 158 DSSTLEAMNVP 168
           DS T   M +P
Sbjct: 107 DSETASKMMMP 117


>gi|328544565|ref|YP_004304674.1| peptidoglycan binding domain protein [polymorphum gilvum
           SL003B-26A1]
 gi|326414307|gb|ADZ71370.1| Putative peptidoglycan binding domain protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 229

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           S  V  ++  L   G       L        E AV+ ++++ GL  +G   ++ L  + +
Sbjct: 69  SALVLDIQTELRRLGLY--EGLLDGLVGPATERAVRRYELQAGLPETGEATAALLARLTM 126

Query: 168 PVD 170
             D
Sbjct: 127 EPD 129



 Score = 36.2 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
                + R+++ L   G                 SA++ F++  GL  +G V+ + +E +
Sbjct: 162 AQDRLLMRVQQVLSDLGYGPLRA--DGLMGDNTASAIQRFELDRGLPITGRVNPTLVERL 219

Query: 166 NV 167
             
Sbjct: 220 EQ 221


>gi|260566048|ref|ZP_05836518.1| LOW QUALITY PROTEIN: lytic murein transglycosylase [Brucella suis
           bv. 4 str. 40]
 gi|261752738|ref|ZP_05996447.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella suis
           bv. 5 str. 513]
 gi|261755398|ref|ZP_05999107.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella suis
           bv. 3 str. 686]
 gi|260155566|gb|EEW90646.1| LOW QUALITY PROTEIN: lytic murein transglycosylase [Brucella suis
           bv. 4 str. 40]
 gi|261742491|gb|EEY30417.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella suis
           bv. 5 str. 513]
 gi|261745151|gb|EEY33077.1| LOW QUALITY PROTEIN: lytic Murein transglycosylase [Brucella suis
           bv. 3 str. 686]
          Length = 267

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G +   ++ L+ +L   G       +   F      AV+  Q+R G+ 
Sbjct: 197 GAPAFDPGTPVPGLTQDQLKELQTKLQARGY--EMGKIDGVFGVATRDAVRSEQLRLGMP 254

Query: 153 PSGMVDSSTLEAM 165
                    L+ +
Sbjct: 255 ADSWPTQELLDRL 267


>gi|254385315|ref|ZP_05000644.1| phage protein [Streptomyces sp. Mg1]
 gi|194344189|gb|EDX25155.1| phage protein [Streptomyces sp. Mg1]
          Length = 414

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 4/78 (5%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G   +    +  G  + SV+ ++  L     LD        F    ++AV  FQ + GL 
Sbjct: 167 GDVTVTATDVVFGARNTSVRIVQAALAAEVGLD-YASAPGTFGPRTKAAVAAFQRKLGLT 225

Query: 153 P---SGMVDSSTLEAMNV 167
                G     +L  +  
Sbjct: 226 DGDADGAFGRFSLTELGR 243


>gi|157644751|gb|ABV59081.1| type III effector HopAJ1 [Pseudomonas syringae pv. averrhoi]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGTADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|115377348|ref|ZP_01464555.1| ErfK/YbiS/YcfS/YnhG family protein, putative [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365668|gb|EAU64696.1| ErfK/YbiS/YcfS/YnhG family protein, putative [Stigmatella
           aurantiaca DW4/3-1]
          Length = 516

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 155 GMVDSSTL----------EAMNVPVDLRIRQLQVNLMRIKK---LLEQKMGLRYVLVNIP 201
           G++   T+          +   +  +  +     NL R++    L +     R++ V++ 
Sbjct: 312 GVLAPRTVVALQEFSGDGQWARLAPEQWVA--VENLHRLRAAPALPDLLPEERWLDVDLT 369

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI--NRIMFNPYWVIPRSIIQKDMMALL 259
              L A E  K    + +  G+   +TP    RI       +      RS  +   +   
Sbjct: 370 EQVLVAYEGVKPVYATLISSGKPLHETPTGIFRIWLKSSEADMTGAEGRSRYRVATVPWT 429

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                    +  +  D  G+ V    ++ +  +          G    + 
Sbjct: 430 MFFQGNFALHTAYWHDRWGEPVSHGCINLSPRDARALYRW--SGPEVPLG 477


>gi|23501467|ref|NP_697594.1| peptidoglycan-binding protein [Brucella suis 1330]
 gi|82699474|ref|YP_414048.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis biovar Abortus 2308]
 gi|148560514|ref|YP_001258575.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|161618553|ref|YP_001592440.1| peptidoglycan binding domain-containing protein [Brucella canis
           ATCC 23365]
 gi|189023802|ref|YP_001934570.1| peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225627085|ref|ZP_03785123.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|225852107|ref|YP_002732340.1| peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|254688863|ref|ZP_05152117.1| Peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|254696994|ref|ZP_05158822.1| Peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254701373|ref|ZP_05163201.1| Peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|254703918|ref|ZP_05165746.1| Peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|254707706|ref|ZP_05169534.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|254709711|ref|ZP_05171522.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|254712866|ref|ZP_05174677.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|254716780|ref|ZP_05178591.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|254729895|ref|ZP_05188473.1| Peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|256031202|ref|ZP_05444816.1| Peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|256044287|ref|ZP_05447191.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256060710|ref|ZP_05450874.1| Peptidoglycan-binding domain 1 protein [Brucella neotomae 5K33]
 gi|256113120|ref|ZP_05453997.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256159300|ref|ZP_05457095.1| Peptidoglycan-binding domain 1 protein [Brucella ceti M490/95/1]
 gi|256254610|ref|ZP_05460146.1| Peptidoglycan-binding domain 1 protein [Brucella ceti B1/94]
 gi|256257111|ref|ZP_05462647.1| Peptidoglycan-binding domain 1 protein [Brucella abortus bv. 9 str.
           C68]
 gi|256369017|ref|YP_003106525.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260168338|ref|ZP_05755149.1| peptidoglycan-binding protein, putative [Brucella sp. F5/99]
 gi|260754347|ref|ZP_05866695.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|260757566|ref|ZP_05869914.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260761391|ref|ZP_05873734.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883372|ref|ZP_05894986.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|261218577|ref|ZP_05932858.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261221785|ref|ZP_05936066.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|261315200|ref|ZP_05954397.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317243|ref|ZP_05956440.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261320574|ref|ZP_05959771.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261324701|ref|ZP_05963898.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|261751911|ref|ZP_05995620.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261754569|ref|ZP_05998278.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|265988282|ref|ZP_06100839.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|265990698|ref|ZP_06103255.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265994530|ref|ZP_06107087.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265997749|ref|ZP_06110306.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M490/95/1]
 gi|297247958|ref|ZP_06931676.1| peptidoglycan-binding protein [Brucella abortus bv. 5 str. B3196]
 gi|23347371|gb|AAN29509.1| peptidoglycan-binding protein, putative [Brucella suis 1330]
 gi|82615575|emb|CAJ10558.1| Putative peptidoglycan binding domain 1 [Brucella melitensis biovar
           Abortus 2308]
 gi|148371771|gb|ABQ61750.1| putative peptidoglycan-binding protein [Brucella ovis ATCC 25840]
 gi|161335364|gb|ABX61669.1| Peptidoglycan-binding domain 1 protein [Brucella canis ATCC 23365]
 gi|189019374|gb|ACD72096.1| Putative peptidoglycan binding domain 1 [Brucella abortus S19]
 gi|225617920|gb|EEH14964.1| peptidoglycan-binding protein [Brucella ceti str. Cudo]
 gi|225640472|gb|ACO00386.1| Peptidoglycan-binding domain 1 protein [Brucella melitensis ATCC
           23457]
 gi|255999177|gb|ACU47576.1| peptidoglycan-binding protein, putative [Brucella microti CCM 4915]
 gi|260667884|gb|EEX54824.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 4 str.
           292]
 gi|260671823|gb|EEX58644.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674455|gb|EEX61276.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 6 str.
           870]
 gi|260872900|gb|EEX79969.1| peptidoglycan binding domain-containing protein [Brucella abortus
           bv. 9 str. C68]
 gi|260920369|gb|EEX87022.1| peptidoglycan binding domain-containing protein [Brucella ceti
           B1/94]
 gi|260923666|gb|EEX90234.1| peptidoglycan-binding domain 1 protein [Brucella ceti M13/05/1]
 gi|261293264|gb|EEX96760.1| peptidoglycan-binding domain 1 protein [Brucella ceti M644/93/1]
 gi|261296466|gb|EEX99962.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           B2/94]
 gi|261300681|gb|EEY04178.1| peptidoglycan binding domain-containing protein [Brucella neotomae
           5K33]
 gi|261304226|gb|EEY07723.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M163/99/10]
 gi|261741664|gb|EEY29590.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 5 str.
           513]
 gi|261744322|gb|EEY32248.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 3 str.
           686]
 gi|262552217|gb|EEZ08207.1| peptidoglycan binding domain-containing protein [Brucella ceti
           M490/95/1]
 gi|262765643|gb|EEZ11432.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|263001482|gb|EEZ14057.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|264660479|gb|EEZ30740.1| peptidoglycan-binding domain 1 protein [Brucella pinnipedialis
           M292/94/1]
 gi|297175127|gb|EFH34474.1| peptidoglycan-binding protein [Brucella abortus bv. 5 str. B3196]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|328724691|ref|XP_001949484.2| PREDICTED: matrix metalloproteinase-16-like isoform 1
           [Acyrthosiphon pisum]
          Length = 547

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 31/82 (37%), Gaps = 15/82 (18%)

Query: 118 LIISGDLDPSKGLSV----AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L PS           +  +  A+  FQ   GL+ +G +D  TL  M++P     
Sbjct: 38  LSQFGYLSPSMKNPNSGHIMSEETMARALMEFQSFVGLNLTGHLDDETLHYMSMPRCGVR 97

Query: 169 ------VDLRIRQLQVNLMRIK 184
                  D R R+  +   R +
Sbjct: 98  DKVGFATDSRSRRYALQGSRWR 119


>gi|187935651|ref|YP_001884915.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum B str. Eklund
           17B]
 gi|187723804|gb|ACD25025.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum B str. Eklund
           17B]
          Length = 412

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 11/90 (12%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD------PGKINAMASTKIEFYSR 318
           +   N   ++        +              ++Q       PG  + + S  + F   
Sbjct: 304 WFYKNGYLVVQSDIVTGNMSAGYATPSGTYKLYYKQKDTVLRGPGYASPV-SFWMPFNG- 361

Query: 319 NNTYMHDTPEPILFN--NVVRFETSGCVRV 346
               +HD      F         + GC+ +
Sbjct: 362 -GIGLHDANWRSEFGGEIYKNGGSHGCINL 390


>gi|146340537|ref|YP_001205585.1| putative membrane-bound lytic transglycosylase protein signal
           peptide [Bradyrhizobium sp. ORS278]
 gi|146193343|emb|CAL77359.1| Putative membrane-bound lytic transglycosylase precursor protein,
           putative signal peptide [Bradyrhizobium sp. ORS278]
          Length = 406

 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNV 167
             VQ +++RL  +G    + G           A++ FQ + GL    G      L  +  
Sbjct: 347 AEVQEMQKRLTAAGF--ATGGTDGRVGNDTMKAIRDFQAKAGLTPADGYGGLKVLTKLRQ 404


>gi|310824581|ref|YP_003956939.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
 gi|309397653|gb|ADO75112.1| ErfK/YbiS/YcfS/YnhG family protein [Stigmatella aurantiaca DW4/3-1]
          Length = 489

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 19/170 (11%)

Query: 155 GMVDSSTL----------EAMNVPVDLRIRQLQVNLMRIKK---LLEQKMGLRYVLVNIP 201
           G++   T+          +   +  +  +     NL R++    L +     R++ V++ 
Sbjct: 285 GVLAPRTVVALQEFSGDGQWARLAPEQWVA--VENLHRLRAAPALPDLLPEERWLDVDLT 342

Query: 202 AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRI--NRIMFNPYWVIPRSIIQKDMMALL 259
              L A E  K    + +  G+   +TP    RI       +      RS  +   +   
Sbjct: 343 EQVLVAYEGVKPVYATLISSGKPLHETPTGIFRIWLKSSEADMTGAEGRSRYRVATVPWT 402

Query: 260 RQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA 309
                    +  +  D  G+ V    ++ +  +          G    + 
Sbjct: 403 MFFQGNFALHTAYWHDRWGEPVSHGCINLSPRDARALYRW--SGPEVPLG 450


>gi|237654230|ref|YP_002890544.1| peptidoglycan-binding protein [Thauera sp. MZ1T]
 gi|237625477|gb|ACR02167.1| Peptidoglycan-binding domain 1 protein [Thauera sp. MZ1T]
          Length = 380

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 31/145 (21%)

Query: 54  NFLARVDMGIDSDIPIISKETIAQTEKAIAFYQD---ILSRGGWP-------------EL 97
              A +D  + +    +     A   + +   +    ++ +G W               +
Sbjct: 236 GEQAWIDAYVRTRRAWLEGHARADLRQTVYRMEAFGRLIDQGFWGLEMPLVVRGREISSV 295

Query: 98  PIRPLHLG-----NSSVSVQRLRE--------RLIISGDLDPSKGL--SVAFDAYVESAV 142
            +  L  G             L          RL+  G  D    +     F     + +
Sbjct: 296 TLAALPPGCYDGPQPGSRPLTLATPLARGLDVRLLQLGLSDRGVDILADGIFGRTSFNLL 355

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
           K +Q +HGL  +G+ D + +  +  
Sbjct: 356 KAWQAQHGLAATGIADPALIGELTA 380


>gi|306845192|ref|ZP_07477768.1| peptidoglycan binding domain-containing protein [Brucella sp. BO1]
 gi|306274351|gb|EFM56158.1| peptidoglycan binding domain-containing protein [Brucella sp. BO1]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|281346656|gb|EFB22240.1| hypothetical protein PANDA_000051 [Ailuropoda melanoleuca]
          Length = 617

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 4   LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 63

Query: 172 RIRQLQVNLMRIK 184
               ++ NL R +
Sbjct: 64  FGVHVKANLRRRR 76


>gi|254693344|ref|ZP_05155172.1| Peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261213593|ref|ZP_05927874.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915200|gb|EEX82061.1| peptidoglycan-binding domain 1 protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|163842856|ref|YP_001627260.1| peptidoglycan binding domain-containing protein [Brucella suis ATCC
           23445]
 gi|163673579|gb|ABY37690.1| Peptidoglycan-binding domain 1 protein [Brucella suis ATCC 23445]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|116253819|ref|YP_769657.1| peptidoglycan binding protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258467|emb|CAK09571.1| putative peptidoglycan binding protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 407

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 330 QIAGYGGVLQRWPR-PDGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 383 SAVQSRIGMQPDGEPSLPLLNALRR 407


>gi|297272410|ref|XP_001114445.2| PREDICTED: matrix metalloproteinase-28 isoform 1 [Macaca mulatta]
          Length = 520

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WDRLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|294853408|ref|ZP_06794080.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
 gi|294819063|gb|EFG36063.1| peptidoglycan-binding protein [Brucella sp. NVSL 07-0026]
          Length = 978

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           +V+ ++  L  +G    +       DA   +A+  FQ  +G +P+G V+   ++
Sbjct: 920 AVRNIQLILQKNGY--DTGTADGMMDAKTRTAISAFQKANGQEPTGEVNQKLVQ 971


>gi|66814378|ref|XP_641368.1| hypothetical protein DDB_G0280311 [Dictyostelium discoideum AX4]
 gi|60469388|gb|EAL67382.1| hypothetical protein DDB_G0280311 [Dictyostelium discoideum AX4]
          Length = 1084

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/36 (25%), Positives = 15/36 (41%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQ 146
           V+ L+  L     L     +   +D    +A+K FQ
Sbjct: 474 VKELQAALSHLNYLPLLTKIDGCYDQKTINALKAFQ 509


>gi|325126435|gb|ADY85765.1| Hypothetical conserved protein [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 211

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 37/157 (23%), Gaps = 14/157 (8%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVD--LRIRQLQVNLMRIKK-----LLEQKMGL 193
           AV+ FQ  H L  +G VD  T   + +      +I      L           +E  +  
Sbjct: 20  AVRRFQASHHLKVTGNVDQKTWTKLGLGKKLFKQIDSYTAPLGAQAWEGRKAHIEAMIRQ 79

Query: 194 RYVLVNIP--AASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSII 251
            Y  +  P    S      G       +        +P+  S I        W       
Sbjct: 80  AYKYMGHPYLVGSSSMTRYGTDCSGLIIQSLYAGGISPVPVSAIGHAHPGNEWN-----S 134

Query: 252 QKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           +        +   Y              +       W
Sbjct: 135 RNLWADKKLKRVSYASRRRGATWSSTTSQAPGLSGTW 171


>gi|157110203|ref|XP_001650998.1| hypothetical protein AaeL_AAEL000790 [Aedes aegypti]
 gi|108883949|gb|EAT48174.1| conserved hypothetical protein [Aedes aegypti]
          Length = 102

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L  S   +        ++ AV+LFQ    LDP+G +D  TLE M +P
Sbjct: 3   LMEFGYLPKSNIETGNLRTMEQLQEAVRLFQNFANLDPTGKIDQDTLELMRMP 55


>gi|254718729|ref|ZP_05180540.1| Peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|265983705|ref|ZP_06096440.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306838707|ref|ZP_07471542.1| peptidoglycan binding domain-containing protein [Brucella sp. NF
           2653]
 gi|264662297|gb|EEZ32558.1| peptidoglycan-binding domain 1 protein [Brucella sp. 83/13]
 gi|306406194|gb|EFM62438.1| peptidoglycan binding domain-containing protein [Brucella sp. NF
           2653]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 275 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 332


>gi|150395374|ref|YP_001325841.1| peptidoglycan binding domain-containing protein [Sinorhizobium
            medicae WSM419]
 gi|150026889|gb|ABR59006.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae WSM419]
          Length = 1226

 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 3/72 (4%)

Query: 94   WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            W   P +   +  +  +V+ ++  L  +G    +            +A+K FQ   G +P
Sbjct: 1153 WIGPPTKTATVDMT-RAVRNIQAILNKNGF--DAGTPDGRVGNKTTAAIKAFQKTVGQEP 1209

Query: 154  SGMVDSSTLEAM 165
            +G +  + +  +
Sbjct: 1210 TGEITDALVREL 1221


>gi|109082872|ref|XP_001100232.1| PREDICTED: matrix metalloproteinase-14-like [Macaca mulatta]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|4126377|dbj|BAA36551.1| Membrane-type matrix metalloproteinase-1 [Capra hircus]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|804994|emb|CAA58519.1| MT-MMP [Homo sapiens]
 gi|40675475|gb|AAH64803.1| Matrix metallopeptidase 14 (membrane-inserted) [Homo sapiens]
 gi|54781371|gb|AAV40837.1| matrix metalloproteinase 14 (membrane-inserted) [Homo sapiens]
 gi|158256086|dbj|BAF84014.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|332222943|ref|XP_003260629.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-14-like
           [Nomascus leucogenys]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|793763|dbj|BAA05519.1| membrane-type matrix metalloproteinase [Homo sapiens]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|4826834|ref|NP_004986.1| matrix metalloproteinase-14 preproprotein [Homo sapiens]
 gi|317373419|sp|P50281|MMP14_HUMAN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=MMP-X1; AltName: Full=Membrane-type matrix
           metalloproteinase 1; Short=MT-MMP 1; Short=MTMMP1;
           AltName: Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|963054|emb|CAA88372.1| membrane-type matrix metalloproteinase 1 [Homo sapiens]
 gi|1127837|gb|AAA83770.1| membrane-type matrix metalloproteinase-1 [Homo sapiens]
 gi|119586641|gb|EAW66237.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_b [Homo
           sapiens]
 gi|168277826|dbj|BAG10891.1| matrix metalloproteinase-14 precursor [synthetic construct]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|297517138|ref|ZP_06935524.1| LysM domain/ErfK/YbiS/YcfS/YnhG family protein [Escherichia coli
           OP50]
          Length = 171

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
           LL      + ++VN+    L     G+ +     + +G    +TP++ +R+ + + NP W
Sbjct: 88  LLLPDAPRQGIIVNLAELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTW 147

Query: 245 VIPRSIIQKDMMALLR 260
                I Q+ +   ++
Sbjct: 148 TPTAGIRQRSLERGIK 163


>gi|296483589|gb|DAA25704.1| matrix metalloproteinase-14 precursor [Bos taurus]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|294676544|ref|YP_003577159.1| lysozyme [Rhodobacter capsulatus SB 1003]
 gi|294475364|gb|ADE84752.1| lysozyme [Rhodobacter capsulatus SB 1003]
          Length = 309

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAMNV--PVDLRIRQLQV 178
           ++ FQ  HGL   G +  +TL  +        + + + +
Sbjct: 199 IRRFQADHGLTIDGKIGRATLSTLQRRLDAAEKAKPVAL 237


>gi|291390212|ref|XP_002711594.1| PREDICTED: matrix metalloproteinase 15 [Oryctolagus cuniculus]
          Length = 668

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 50  LRLYGYLPQPSRHMSTLRSAQILASALAEMQRFYGIPVTGVLDEETKAWMKRPRCGVPDQ 109

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVI 220
               ++ NL R +K      G ++   ++  +     E          +
Sbjct: 110 FGVHVKANLRRRRKRYALT-GRKWSNNHLTFSIQNYTEKLGWYHSMEAV 157


>gi|241206300|ref|YP_002977396.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860190|gb|ACS57857.1| lytic murein transglycosylase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 407

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 11/85 (12%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
            I   GG    WP  P   L +         L+ RL   G    +  +   F +  ++A+
Sbjct: 330 QIAGYGGMQQRWPR-PNGALDI----TEKFELQTRLKTLGYY--NGEVDGNFGSGSKAAI 382

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNV 167
              Q R G+ P G      L A+  
Sbjct: 383 SAVQSRIGMQPDGEPSLPLLNALRR 407


>gi|114652043|ref|XP_001157566.1| PREDICTED: matrix metalloproteinase 14 isoform 2 [Pan troglodytes]
          Length = 545

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|49475255|ref|YP_033296.1| hypothetical protein BH04580 [Bartonella henselae str. Houston-1]
 gi|49238060|emb|CAF27267.1| hypothetical protein BH04580 [Bartonella henselae str. Houston-1]
          Length = 282

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             +  +++ L I G  +    ++   D     A+K FQ    L  +G ++ + L
Sbjct: 221 ADIIEVQKALRIFG--NQEVIVTGVEDQKTVEALKQFQKMFDLPITGKINHTVL 272


>gi|261244996|ref|NP_001159653.1| matrix metalloproteinase-14 [Ovis aries]
 gi|256665391|gb|ACV04841.1| membrane-inserted matrix metallopeptidase 14 [Ovis aries]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|327286066|ref|XP_003227752.1| PREDICTED: matrix metalloproteinase-25-like [Anolis carolinensis]
          Length = 514

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      +        + +A+K  Q   GL  +G +D  T++ M+ P
Sbjct: 37  LTRYGYLPQPDPRAAQLQSSEELANAIKTMQRFAGLPTTGEMDQKTMDMMSKP 89


>gi|312195312|ref|YP_004015373.1| peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
 gi|311226648|gb|ADP79503.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EuI1c]
          Length = 404

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 36/130 (27%), Gaps = 5/130 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              V++L + L+  G  +       S  F    + A++  Q   GLD +G +D   +  +
Sbjct: 152 GSDVRQLNQALVRLGYANELGLDPDSDQFGWATKLAIERLQDHLGLDQTGRLDLGQIVFL 211

Query: 166 NVPVDLRIRQLQV---NLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVG 222
                +      V          +       +  +    A   +     KV +       
Sbjct: 212 PTAARIIAVSATVGAPTPTSAVIMQATSTERQVTVALDAAQQTQVNAGDKVTITLPSGRT 271

Query: 223 RVDRQTPILH 232
                  +  
Sbjct: 272 TPGVVAAVGT 281


>gi|114652041|ref|XP_001157686.1| PREDICTED: matrix metalloproteinase-14 isoform 4 [Pan troglodytes]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|77165651|ref|YP_344176.1| hypothetical protein Noc_2186 [Nitrosococcus oceani ATCC 19707]
 gi|254434758|ref|ZP_05048266.1| ErfK/YbiS/YcfS/YnhG superfamily [Nitrosococcus oceani AFC27]
 gi|76883965|gb|ABA58646.1| conserved hypothetical protein [Nitrosococcus oceani ATCC 19707]
 gi|207091091|gb|EDZ68362.1| ErfK/YbiS/YcfS/YnhG superfamily [Nitrosococcus oceani AFC27]
          Length = 161

 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)

Query: 321 TYMHDTPEPILFNNVVRFETSGCVRVRN 348
            Y+H  P+  +        + GC+R+ N
Sbjct: 118 IYIHGAPDAAIMG---LPGSHGCIRIHN 142


>gi|327291129|ref|XP_003230274.1| PREDICTED: matrix metalloproteinase-15-like, partial [Anolis
           carolinensis]
          Length = 404

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L PS        +   + +A+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 49  LRFYGYLPPSSPQMSTLRSAQTLSAAISEMQGFYGIPVTGLLDHETAAWMKRPRCGVPDK 108

Query: 172 RIRQLQVNLMRIK 184
               ++ N+ R +
Sbjct: 109 IGAGVKANMRRKR 121


>gi|327285686|ref|XP_003227564.1| PREDICTED: matrix metalloproteinase-14-like, partial [Anolis
           carolinensis]
          Length = 542

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS TL+AM  P     D 
Sbjct: 3   LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKSDSETLKAMKRPRCGVPDK 62

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 63  FGAEIKANVRRRR 75


>gi|325291890|ref|YP_004277754.1| hemaglutinin protein [Agrobacterium sp. H13-3]
 gi|325059743|gb|ADY63434.1| putative hemaglutinin protein [Agrobacterium sp. H13-3]
          Length = 1273

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +++ ++  L  +G    +            +A+K FQ   G  P G + +  + A+
Sbjct: 1215 AIRNIQAILNKNGF--DAGQPDGKLGKNTVTAIKDFQKSVGQTPDGRITNELVTAL 1268


>gi|323136902|ref|ZP_08071982.1| lytic murein transglycosylase [Methylocystis sp. ATCC 49242]
 gi|322397663|gb|EFY00185.1| lytic murein transglycosylase [Methylocystis sp. ATCC 49242]
          Length = 391

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 2/63 (3%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + L+  LI +G                + A+  FQ R GL  +G      L 
Sbjct: 329 PGLSRAERRELQSLLIRAGY--EVGDPDGVIGTKTKEAIADFQGRVGLPRNGRASLKVLN 386

Query: 164 AMN 166
           A+ 
Sbjct: 387 ALR 389


>gi|319790645|ref|YP_004152278.1| Peptidoglycan-binding domain 1 protein [Thermovibrio ammonificans
           HB-1]
 gi|317115147|gb|ADU97637.1| Peptidoglycan-binding domain 1 protein [Thermovibrio ammonificans
           HB-1]
          Length = 445

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS-GMVDSSTLEAMNVP 168
           + +L+  L   G  D    +   + A  + AV  +Q  H L  + G V    L+ +N+ 
Sbjct: 388 IGKLQVALKKEGYYD--GPIDGIWGAKTQRAVVAYQKDHDLPITPGAVTLKMLKMLNLS 444


>gi|306842151|ref|ZP_07474820.1| peptidoglycan binding domain-containing protein [Brucella sp. BO2]
 gi|306287738|gb|EFM59169.1| peptidoglycan binding domain-containing protein [Brucella sp. BO2]
          Length = 322

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 259 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 316


>gi|251779919|ref|ZP_04822839.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084234|gb|EES50124.1| ErfK/YbiS/YcfS/YnhG family [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 412

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 24/90 (26%), Gaps = 11/90 (12%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD------PGKINAMASTKIEFYSR 318
           +   N   ++        +              ++Q       PG  + + S  + F   
Sbjct: 304 WFYKNGYLIVQSDIVTGNMSAGYATPSGTYKLYYKQKDTVLRGPGYASPV-SFWMPFNG- 361

Query: 319 NNTYMHDTPEPILFN--NVVRFETSGCVRV 346
               +HD      F         + GC+ +
Sbjct: 362 -GIGLHDANWRSEFGGEIYKNGGSHGCINL 390


>gi|162329592|ref|NP_001104772.1| matrix metalloproteinase-9 [Equus caballus]
 gi|157930939|gb|ABW04638.1| MMP9 [Equus caballus]
          Length = 714

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G    ++      D  +E A++  Q R  L  +G +DS+TLEAM  P
Sbjct: 49  LFRYGYTGVAEMSEG--DQPLERALRRLQKRLALPETGELDSTTLEAMRTP 97


>gi|17228165|ref|NP_484713.1| hypothetical protein alr0669 [Nostoc sp. PCC 7120]
 gi|17130015|dbj|BAB72627.1| alr0669 [Nostoc sp. PCC 7120]
          Length = 295

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 4/99 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           + ++++LI  G LDP       F  +   A+K FQ    ++   ++  ST++A+    ++
Sbjct: 26  KEVQKQLIDLGLLDPPA--DGKFGRFSTQALKDFQSLMKIEE-AVLGKSTIQALMEVKEV 82

Query: 172 RIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVEN 210
              QL  NL   + +   +    +V       ++  +E 
Sbjct: 83  IPFQLSNNLA-SRIIKYMQSKDYFVARGKQRYNIVYIEG 120


>gi|239987393|ref|ZP_04708057.1| hypothetical protein SrosN1_08817 [Streptomyces roseosporus NRRL
           11379]
 gi|291444351|ref|ZP_06583741.1| ykuG [Streptomyces roseosporus NRRL 15998]
 gi|291347298|gb|EFE74202.1| ykuG [Streptomyces roseosporus NRRL 15998]
          Length = 804

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ-------VNLMRIKKL 186
           +DA +   V+ FQ    L+ +G  D  T   + V +    R +        +   R K L
Sbjct: 258 YDAKLAEWVREFQRFCKLEVNGRSDYQTWAQLLVSMGDPDRDVTGSDTRFEITASRAKWL 317

Query: 187 LEQKMGLRYVLVNIP 201
            + K+ +    +N P
Sbjct: 318 RDNKIEIVGRYINDP 332


>gi|239940917|ref|ZP_04692854.1| hypothetical protein SrosN15_07960 [Streptomyces roseosporus NRRL
           15998]
          Length = 764

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 7/75 (9%)

Query: 134 FDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ-------VNLMRIKKL 186
           +DA +   V+ FQ    L+ +G  D  T   + V +    R +        +   R K L
Sbjct: 218 YDAKLAEWVREFQRFCKLEVNGRSDYQTWAQLLVSMGDPDRDVTGSDTRFEITASRAKWL 277

Query: 187 LEQKMGLRYVLVNIP 201
            + K+ +    +N P
Sbjct: 278 RDNKIEIVGRYINDP 292


>gi|330872617|gb|EGH06766.1| type III helper protein HopAJ1 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330943490|gb|EGH45832.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGAADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|310826551|ref|YP_003958908.1| hypothetical protein ELI_0937 [Eubacterium limosum KIST612]
 gi|308738285|gb|ADO35945.1| hypothetical protein ELI_0937 [Eubacterium limosum KIST612]
          Length = 628

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 7/132 (5%)

Query: 80  KAIAFYQDILSRGGWPELPIRPLH----LGNSSVSVQRL-RERLIISGDLDPSKGLSVAF 134
           +AI  Y    + G + +     L      G+       L R  L  +G        S  +
Sbjct: 198 QAIEGYSVEDATGNFGDGTKANLVNILVPGSGDSEALLLARYALCCNGYTVNYTSTS--W 255

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLR 194
           D+ + S V  FQ    L  +G VD +T  ++ +      R       R +    +   L 
Sbjct: 256 DSEMASQVTAFQSDLALPQTGTVDVNTWMSLLLSKGNPDRSCDACDTRFEITDYRMQHLN 315

Query: 195 YVLVNIPAASLE 206
               +I    L 
Sbjct: 316 AKGYSIVGRYLT 327


>gi|218508965|ref|ZP_03506843.1| putative peptidoglycan binding (cell wall degradation) protein
           [Rhizobium etli Brasil 5]
          Length = 272

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           V  ++++L+  G    +            +A+  FQ   G+  +G      L A+     
Sbjct: 101 VMGIQQQLVRRGLY--NGIPDGIIGPRTSAAILFFQETVGMAQTGEATPEVLAALKTDAA 158


>gi|110331901|gb|ABG67056.1| matrix metalloproteinase 14 preproprotein [Bos taurus]
          Length = 536

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|19071492|gb|AAL84245.1|AF458045_1 type III effector HopPmaG [Pseudomonas syringae pv. maculicola]
 gi|330962749|gb|EGH63009.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGAADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|62289545|ref|YP_221338.1| peptidoglycan-binding protein [Brucella abortus bv. 1 str. 9-941]
 gi|62195677|gb|AAX73977.1| hypothetical peptidoglycan-binding protein [Brucella abortus bv. 1
           str. 9-941]
          Length = 322

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 259 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 316


>gi|148251697|ref|YP_001236282.1| peptidoglycan binding domain-containing protein [Bradyrhizobium sp.
           BTAi1]
 gi|146403870|gb|ABQ32376.1| putative exported protein of unknown function with peptidoglycan
           binding domain [Bradyrhizobium sp. BTAi1]
          Length = 459

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 8/90 (8%)

Query: 95  PELPIRPLHLGNSSVSVQR----LRERLIISGDLD----PSKGLSVAFDAYVESAVKLFQ 146
             +  +P+  G  + +         ERL +  DL      +  ++      + +A+K +Q
Sbjct: 41  KPVATQPVRPGVQAPADTANAMGQAERLALQSDLAWVGQYNGAITGDVSERMVNAIKEYQ 100

Query: 147 MRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
              G  P+G+++      +      +   +
Sbjct: 101 KLKGGKPTGVLNPQERAVLADTARRKQESV 130


>gi|260558069|ref|ZP_05830280.1| lytic murein transglycosylase B [Acinetobacter baumannii ATCC
           19606]
 gi|260408423|gb|EEX01730.1| lytic murein transglycosylase B [Acinetobacter baumannii ATCC
           19606]
          Length = 430

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|239503932|ref|ZP_04663242.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB900]
          Length = 430

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|193078394|gb|ABO13365.2| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii ATCC 17978]
          Length = 430

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|118590195|ref|ZP_01547598.1| putative transglycosylase transmembrane protein [Stappia aggregata
           IAM 12614]
 gi|118437167|gb|EAV43805.1| putative transglycosylase transmembrane protein [Stappia aggregata
           IAM 12614]
          Length = 416

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P         G     +++L+ +L   G       +     +   +AV+  Q + G+ 
Sbjct: 346 GAPVYTQGNPDPGLDDAQMRQLQSKLSSMGY--DVGKIDGILGSGTRNAVQQVQQKLGMP 403

Query: 153 PSGMVDSSTLEAM 165
                    L  +
Sbjct: 404 ADAWPTPELLNRL 416


>gi|130486970|ref|NP_001076262.1| matrix metalloproteinase-14 precursor [Oryctolagus cuniculus]
 gi|3041677|sp|Q95220|MMP14_RABIT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|1805295|gb|AAB41500.1| membrane type 1 metalloproteinase [Oryctolagus cuniculus]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|1495995|emb|CAA62432.1| MT-MMP protein [Homo sapiens]
          Length = 582

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|91977288|ref|YP_569947.1| hypothetical protein RPD_2818 [Rhodopseudomonas palustris BisB5]
 gi|91683744|gb|ABE40046.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris BisB5]
          Length = 536

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+         L   T
Sbjct: 138 NGVALHGGPLPGY------AASHGCVRM--PYGFAEKLFDRT 171


>gi|224824538|ref|ZP_03697645.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
 gi|224603031|gb|EEG09207.1| ErfK/YbiS/YcfS/YnhG family protein [Lutiella nitroferrum 2002]
          Length = 219

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)

Query: 316 YSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDL 352
                 Y+H   E + F       + GCVR+RN   +
Sbjct: 168 SYDRAIYIHGAGEHVAFGTPT---SLGCVRMRNPDVI 201


>gi|184156347|ref|YP_001844686.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           baumannii ACICU]
 gi|183207941|gb|ACC55339.1| Membrane-bound lytic murein transglycosylase B [Acinetobacter
           baumannii ACICU]
          Length = 430

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|169797788|ref|YP_001715581.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii AYE]
 gi|213155414|ref|YP_002317459.1| transglycolase [Acinetobacter baumannii AB0057]
 gi|215485138|ref|YP_002327379.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB307-0294]
 gi|301347988|ref|ZP_07228729.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB056]
 gi|301512988|ref|ZP_07238225.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB058]
 gi|301596722|ref|ZP_07241730.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB059]
 gi|169150715|emb|CAM88625.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii AYE]
 gi|213054574|gb|ACJ39476.1| transglycolase [Acinetobacter baumannii AB0057]
 gi|213988779|gb|ACJ59078.1| lytic murein transglycosylase family protein [Acinetobacter
           baumannii AB307-0294]
          Length = 430

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|28868073|ref|NP_790692.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28851309|gb|AAO54387.1| type III helper protein HopAJ1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 413

 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE++  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGAADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLESLRR 413


>gi|17987639|ref|NP_540273.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260545698|ref|ZP_05821439.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260563641|ref|ZP_05834127.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260566833|ref|ZP_05837303.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|261757799|ref|ZP_06001508.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|265999562|ref|ZP_05466915.2| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|17983350|gb|AAL52537.1| peptidoglycan binding domain containing protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260097105|gb|EEW80980.1| peptidoglycan-binding domain 1 protein [Brucella abortus NCTC 8038]
 gi|260153657|gb|EEW88749.1| peptidoglycan-binding domain 1 protein [Brucella melitensis bv. 1
           str. 16M]
 gi|260156351|gb|EEW91431.1| peptidoglycan-binding domain 1 protein [Brucella suis bv. 4 str.
           40]
 gi|261737783|gb|EEY25779.1| peptidoglycan-binding domain 1 protein [Brucella sp. F5/99]
 gi|263094677|gb|EEZ18456.1| peptidoglycan binding domain-containing protein [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326408602|gb|ADZ65667.1| Putative peptidoglycan binding domain 1 [Brucella melitensis M28]
 gi|326538323|gb|ADZ86538.1| peptidoglycan-binding domain 1 protein [Brucella melitensis M5-90]
          Length = 299

 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           SS  + R++  L   G  + +  ++       + AV+ FQ   GL  +G +DS+ +  M 
Sbjct: 236 SSQDIVRVQAGLKAFG--NDTVPVNGQPGKATQEAVREFQKLFGLHVTGEIDSALISKMR 293


>gi|316933731|ref|YP_004108713.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315601445|gb|ADU43980.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 502

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 12/67 (17%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
              +H    P          + GC+R+     + +W       W+R     +V     TP
Sbjct: 169 GIALHAGALPGY------PASHGCIRMPMPFAIKMW------GWTRMGARVIVSAGDVTP 216

Query: 380 VKLATEV 386
              A  +
Sbjct: 217 ASFAHPL 223


>gi|126730456|ref|ZP_01746267.1| Peptidoglycan-binding domain 1 [Sagittula stellata E-37]
 gi|126709189|gb|EBA08244.1| Peptidoglycan-binding domain 1 [Sagittula stellata E-37]
          Length = 670

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 13/95 (13%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLH-----LGNSSVSVQRLRERLIISGDLDPSKGL 130
           A    A    + I +       P   L      LG +  + + ++  L + G    +  +
Sbjct: 483 AYVNAATQRIKAIKAD------PHYDLRRAEDFLGLTREARRDIQRDLDMLGYY--TWAV 534

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
              F      AV+ +Q   GL+ +G +D   +  +
Sbjct: 535 DGIFGEGTRDAVRGWQKNAGLEETGYLDLDQIAKI 569


>gi|293339906|ref|XP_001055465.2| PREDICTED: matrix metalloproteinase 25 [Rattus norvegicus]
          Length = 615

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLD 152
             +  + L   + S+ V      L   G L P+  +     +   ++ A+K+ Q   GL 
Sbjct: 71  QPVRAQNLRAQDVSMGVDW----LTRYGYLPPADPVHAQMQSLGKLQDAIKVMQRFAGLP 126

Query: 153 PSGMVDSSTLEAMNVP 168
            +G +D  T+  M+ P
Sbjct: 127 ETGQMDPITIATMHKP 142


>gi|254477979|ref|ZP_05091364.1| peptidoglycan binding domain protein [Ruegeria sp. R11]
 gi|214028564|gb|EEB69400.1| peptidoglycan binding domain protein [Ruegeria sp. R11]
          Length = 351

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D ++ GG    P  P   G +      L++ L   G    + G         E A++
Sbjct: 272 HLADRIAGGGPLRTPFPPDANGLTKEDRIALQKGLTARGF--DTGGADGVIGPNTEKAIR 329

Query: 144 LFQMRHGLDPSGMVDSSTLEAM 165
            +Q   GL  +G    S L  +
Sbjct: 330 AYQQSRGLPLTGTPSQSLLLEL 351


>gi|169634920|ref|YP_001708656.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii SDF]
 gi|169153712|emb|CAP02911.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii]
          Length = 430

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 361 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 418

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 419 AFRQEQARKMMQ 430


>gi|192288521|ref|YP_001989126.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282270|gb|ACE98650.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 448

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++  L  +GD   +  ++      + +A+K FQ   G  P+G+++  
Sbjct: 54  AIQSDLAWTGDY--NGLINGEVSDRMIAAIKQFQTNQGHKPTGVLNPQ 99


>gi|30348960|ref|NP_536701.1| matrix metalloproteinase-28 isoform 1 [Mus musculus]
 gi|27461082|gb|AAL57761.1| matrix metalloproteinase-28 variant A precursor [Mus musculus]
 gi|56207069|emb|CAI24738.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
 gi|219518500|gb|AAI45050.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
          Length = 510

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 29  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 87

Query: 167 VP 168
            P
Sbjct: 88  RP 89


>gi|260577440|ref|ZP_05845401.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
 gi|259020344|gb|EEW23679.1| Peptidoglycan-binding domain 1 protein [Rhodobacter sp. SW2]
          Length = 433

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
             +  ++ RL+        +G+     A   SA+ L+Q   G+  +G +D   L+ + V 
Sbjct: 314 PDIAEIQARLMAMSY--DPEGIDGLTGAGFRSALGLWQTSAGIPSTGYLDGPQLDRLKVD 371

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVL 197
            +      + N    K L +     +  +
Sbjct: 372 SESAFDLWKANSDHFKLLSKASAAPKTGV 400


>gi|114652047|ref|XP_001157506.1| PREDICTED: matrix metalloproteinase 14 isoform 1 [Pan troglodytes]
          Length = 589

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 46  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 105

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 106 FGAEIKANVRRKR 118


>gi|27446748|gb|AAL47576.1| matrix metalloproteinase-28 precursor [Mus musculus]
 gi|56207071|emb|CAI24740.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
 gi|219520252|gb|AAI45049.1| Mmp28 protein [Mus musculus]
          Length = 520

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 29  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 87

Query: 167 VP 168
            P
Sbjct: 88  RP 89


>gi|30348964|ref|NP_766385.1| matrix metalloproteinase-28 isoform 2 [Mus musculus]
 gi|26341830|dbj|BAC34577.1| unnamed protein product [Mus musculus]
 gi|27461084|gb|AAL57762.1| matrix metalloproteinase-28 variant B precursor [Mus musculus]
 gi|56207070|emb|CAI24739.1| matrix metalloproteinase 28 (epilysin) [Mus musculus]
 gi|223459846|gb|AAI37922.1| Matrix metallopeptidase 28 (epilysin) [Mus musculus]
          Length = 496

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 29  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 87

Query: 167 VP 168
            P
Sbjct: 88  RP 89


>gi|118580986|ref|YP_902236.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
 gi|118503696|gb|ABL00179.1| ErfK/YbiS/YcfS/YnhG family protein [Pelobacter propionicus DSM
           2379]
          Length = 192

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 20/68 (29%), Gaps = 8/68 (11%)

Query: 290 SPEPPNFIFRQDPG-KINAMASTKIEFYS---RNNTY-MHDTPEPILFNNVVRFETSGCV 344
                +      PG  +N M   KI       +   Y +H    P       R  T GC 
Sbjct: 112 RERGISLPRAVPPGHPLNYMGPFKISLSHRTWKGAIYRIHGNNNPRRVG---RRVTGGCF 168

Query: 345 RVRNIIDL 352
            + N   L
Sbjct: 169 VMHNRDGL 176


>gi|242000886|ref|XP_002435086.1| matrix metalloproteinase, putative [Ixodes scapularis]
 gi|215498416|gb|EEC07910.1| matrix metalloproteinase, putative [Ixodes scapularis]
          Length = 550

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 118 LIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G +    +   ++     +  AVK FQ   GL  +G VD+ T   M +P
Sbjct: 5   LEKFGYIAPPRNGTAALRSQQALVDAVKDFQRFAGLRVTGRVDNETATMMQLP 57


>gi|170745242|ref|YP_001766699.1| peptidoglycan binding domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658843|gb|ACB27897.1| Peptidoglycan-binding domain 1 protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 455

 Score = 38.1 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 5/93 (5%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN---VPVD 170
           +++ L   G   P             +AV +FQ R GLD SG+ D+ T+ A+     P  
Sbjct: 219 VQQSLNRLG-AAPPLVEDGRNGPRTMAAVAMFQERCGLDDSGLADARTIAAIQEALRPAP 277

Query: 171 LRIRQLQVN-LMRIKKLLEQKMGLRYVLVNIPA 202
            R    ++  L R              L  +P 
Sbjct: 278 DRAVLARIQDLERQVAARAASPTQTAPLQPVPM 310


>gi|293351330|ref|XP_002742480.1| PREDICTED: matrix metalloproteinase 25 [Rattus norvegicus]
          Length = 630

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 6/76 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLD 152
             +  + L   + S+ V      L   G L P+  +     +   ++ A+K+ Q   GL 
Sbjct: 71  QPVRAQNLRAQDVSMGVDW----LTRYGYLPPADPVHAQMQSLGKLQDAIKVMQRFAGLP 126

Query: 153 PSGMVDSSTLEAMNVP 168
            +G +D  T+  M+ P
Sbjct: 127 ETGQMDPITIATMHKP 142


>gi|83952660|ref|ZP_00961390.1| hypothetical protein ISM_10920 [Roseovarius nubinhibens ISM]
 gi|83835795|gb|EAP75094.1| hypothetical protein ISM_10920 [Roseovarius nubinhibens ISM]
          Length = 424

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            ++  L  +G    +      + A    A++ +Q  +GL  +G  D ++L AM + 
Sbjct: 371 AIQTMLNSAGY--EAGTPDGVWGAGSAQAMRAWQAENGLATTGAPDRASLAAMGMN 424


>gi|316931482|ref|YP_004106464.1| peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           DX-1]
 gi|315599196|gb|ADU41731.1| Peptidoglycan-binding domain 1 protein [Rhodopseudomonas palustris
           DX-1]
          Length = 446

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
            ++  L  +GD   +  ++      + +A+K FQ   G  P+G+++  
Sbjct: 53  AIQSDLAWTGDY--NGLINGEVSDRMIAAIKQFQTNQGHKPTGVLNPQ 98


>gi|195027856|ref|XP_001986798.1| GH21566 [Drosophila grimshawi]
 gi|193902798|gb|EDW01665.1| GH21566 [Drosophila grimshawi]
          Length = 587

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 14/81 (17%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     +A++ FQ   GL+ +G +D  T++ M++P     
Sbjct: 40  LSQFGYLPASARNPENSGLQDKRTWVNAIQEFQSFAGLNITGELDEETMKLMSLPRCGVR 99

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R +
Sbjct: 100 DRVGTGDGRSKRYALQGSRWR 120


>gi|171913689|ref|ZP_02929159.1| hypothetical protein VspiD_20955 [Verrucomicrobium spinosum DSM
           4136]
          Length = 214

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 50/185 (27%), Gaps = 41/185 (22%)

Query: 185 KLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYW 244
              +   G   + +++    +   + G++   S +  GR    T     R          
Sbjct: 68  WDADDMTGAPSIRIDLGEQMVYFYKGGELAGGSPISSGREGYSTRPGRYR---------- 117

Query: 245 VIPRSIIQKDMMALLRQDPQY-LKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPG 303
                II+KD+         Y   D N+ + +   ++              N+  R   G
Sbjct: 118 -----IIEKDIDHKSSIYGDYEDYDGNVIVQNVDNRKHPRPAGTRFEGAKMNYFMRIYGG 172

Query: 304 KINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTW 363
                              MH    P          + GC+R+     +     + TP  
Sbjct: 173 -----------------VGMHQGYLPGY------AASHGCIRL--PGRMAEKFYEATPMG 207

Query: 364 SRYHI 368
           +   I
Sbjct: 208 TPVTI 212


>gi|219847915|ref|YP_002462348.1| ErfK/YbiS/YcfS/YnhG family protein [Chloroflexus aggregans DSM
           9485]
 gi|219542174|gb|ACL23912.1| ErfK/YbiS/YcfS/YnhG family protein [Chloroflexus aggregans DSM
           9485]
          Length = 374

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 48/146 (32%), Gaps = 12/146 (8%)

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMG--L 193
             +   ++  Q+ +G D    +D   ++ +   V  ++      + R+    +       
Sbjct: 196 EALSPFLRQQQLIYGFDLD-TLDEVQIDDLGRRVAEQLGLSTAPVARLPGAPDWSPALWQ 254

Query: 194 RYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPY---------W 244
           R + V++    L A E+  +   + V  GR    TP     I   +             W
Sbjct: 255 RRIEVDLTRQRLFAYEDDLLVFTAPVATGRDGFNTPRGEFAIYYRLPEQTMADCLGGECW 314

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNN 270
            +P     + ++  +     Y  + +
Sbjct: 315 YVPNIPWVQYVVGGVALHGTYWHNAH 340


>gi|147900438|ref|NP_001083604.1| matrix metalloproteinase-28 b [Xenopus laevis]
 gi|38197301|gb|AAH61659.1| MGC68506 protein [Xenopus laevis]
          Length = 497

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+ +          + SAV+ FQ    L  SG +D+ T++ M  P
Sbjct: 36  LEKYGYLEETTKQHN--GKQLASAVREFQWLSHLPVSGQLDTITVQQMVQP 84


>gi|51244909|ref|YP_064793.1| hypothetical protein DP1057 [Desulfotalea psychrophila LSv54]
 gi|50875946|emb|CAG35786.1| unknown protein [Desulfotalea psychrophila LSv54]
          Length = 364

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + +++  L+ +G       +     +    AV  FQ    L  +  +   TL+A++V
Sbjct: 308 ISQVQRALLKAGY--NPGSIDGVIGSQTMKAVNKFQAAKKLSVTKYLTIETLQALSV 362


>gi|88703918|ref|ZP_01101633.1| membrane-bound lytic murein transglycosylase [Congregibacter
           litoralis KT71]
 gi|88701745|gb|EAQ98849.1| membrane-bound lytic murein transglycosylase [Congregibacter
           litoralis KT71]
          Length = 422

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 8/71 (11%)

Query: 99  IRPLHLGN------SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             PL LG+          V+  +  L   G    +            +A++ FQ+   L 
Sbjct: 346 APPLALGDAASAPLRRADVENAQRALNSLGH--EAGEPDGVLGKRTRAALRAFQLEQKLP 403

Query: 153 PSGMVDSSTLE 163
             G  D  TLE
Sbjct: 404 ADGYPDRRTLE 414


>gi|114652045|ref|XP_001157623.1| PREDICTED: matrix metalloproteinase 14 isoform 3 [Pan troglodytes]
          Length = 600

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|197103006|ref|NP_001124793.1| matrix metalloproteinase-14 precursor [Pongo abelii]
 gi|75070961|sp|Q5RES1|MMP14_PONAB RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; Flags:
           Precursor
 gi|55725913|emb|CAH89736.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLRVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|47523560|ref|NP_999404.1| matrix metalloproteinase-14 precursor [Sus scrofa]
 gi|11386723|sp|Q9XT90|MMP14_PIG RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|5051632|gb|AAD38324.1|AF067419_1 membrane-type 1 matrix metalloproteinase [Sus scrofa]
          Length = 580

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 37  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 96

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 97  FGAEIKANVRRKR 109


>gi|294141374|ref|YP_003557352.1| membrane-bound lytic murein transglycolase [Shewanella violacea
           DSS12]
 gi|293327843|dbj|BAJ02574.1| membrane-bound lytic murein transglycolase [Shewanella violacea
           DSS12]
          Length = 393

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG   +   P     S   V++L+ +L   G                ++ ++ +Q   G
Sbjct: 318 NGGVSLVAAPPKQDNLSRAKVKQLQAKLNSKGF--DVGKPDGVMGRNSKTGLRAYQKSVG 375

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G  D +T  A+ V 
Sbjct: 376 IVADGFPDEATFNAIGVN 393


>gi|224077434|ref|XP_002187137.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
           (predicted) [Taeniopygia guttata]
          Length = 596

 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS      +     V+SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 36  LKTYGYLLPSDSQMSPLQSGKAVQSAVATMQQFYGIPVTGVLDQTTIEWMKKP 88


>gi|288916653|ref|ZP_06411028.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
 gi|288351908|gb|EFC86110.1| Peptidoglycan-binding domain 1 protein [Frankia sp. EUN1f]
          Length = 276

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 21/78 (26%), Gaps = 13/78 (16%)

Query: 101 PLHLGNSSVSVQRLRERLII-------SGDLDPSKGLSVAFDAYVESAVKLFQM----RH 149
            L   +    V  L+  L I       SGD          +     + V   Q       
Sbjct: 190 TLREKSRGPEVVTLQNALNIIFGHEATSGD-PYRLVPDGVYGPLTTARVAAVQRYATPWF 248

Query: 150 G-LDPSGMVDSSTLEAMN 166
           G +   G+   +T   + 
Sbjct: 249 GRIPDDGICGPNTWRKIG 266


>gi|148683757|gb|EDL15704.1| matrix metallopeptidase 28 (epilysin), isoform CRA_a [Mus musculus]
          Length = 470

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 29  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 87

Query: 167 VP 168
            P
Sbjct: 88  RP 89


>gi|12803593|gb|AAH02631.1| MMP28 protein [Homo sapiens]
 gi|60655721|gb|AAX32424.1| matrix metalloproteinase 28 [synthetic construct]
 gi|119600535|gb|EAW80129.1| matrix metallopeptidase 28, isoform CRA_b [Homo sapiens]
 gi|325464269|gb|ADZ15905.1| matrix metallopeptidase 28 [synthetic construct]
          Length = 393

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|254472170|ref|ZP_05085570.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
 gi|211958453|gb|EEA93653.1| ErfK/YbiS/YcfS/YnhG [Pseudovibrio sp. JE062]
          Length = 127

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 5/51 (9%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWLLKDTPTWSRYHI 368
              +H T    +   +    + GCVR+   N   L   +  + P+ +R  I
Sbjct: 78  GYAIHGT---DVVKRLGAPASHGCVRLHPKNAKRLFSLIQANGPSNARIVI 125


>gi|148683760|gb|EDL15707.1| matrix metallopeptidase 28 (epilysin), isoform CRA_d [Mus musculus]
          Length = 543

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 62  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 120

Query: 167 VP 168
            P
Sbjct: 121 RP 122


>gi|312869485|ref|ZP_07729641.1| KxYKxGKxW signal domain protein [Lactobacillus oris PB013-T2-3]
 gi|311094993|gb|EFQ53281.1| KxYKxGKxW signal domain protein [Lactobacillus oris PB013-T2-3]
          Length = 843

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 40/131 (30%), Gaps = 25/131 (19%)

Query: 258 LLRQDPQYLKDNNIHMID------EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA-- 309
            + Q+  YL +NN  +             V    +     +      R +     A+   
Sbjct: 720 RIGQNRVYLMNNNDVVYTMYCTAGYYQNGVSTTPLGTYYIQAE----RGNSFYNGALGEG 775

Query: 310 -STKIEFYSRNNTYMHDT--PEPILFNNVVRF-------ETSGCVRVRNIIDLDVWLLKD 359
            +    F + +  Y+  T   +                  + GC+R+        W++ +
Sbjct: 776 ANYWTSFLN-HGEYLFHTVPTDRWGNYKPYEASQLGINQGSHGCIRLSIPD--AYWIMHN 832

Query: 360 TPTWSRYHIEE 370
            PT +R  I+ 
Sbjct: 833 VPTGTRVVIDN 843


>gi|213965906|ref|ZP_03394097.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium amycolatum
           SK46]
 gi|213951484|gb|EEB62875.1| ErfK/YbiS/YcfS/YnhG family protein [Corynebacterium amycolatum
           SK46]
          Length = 389

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 3/53 (5%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVV 372
             Y+H  P    +      ++ GC+ V +      W L +T       ++  +
Sbjct: 309 GIYVHGAPW-STWAQGSVNQSHGCINVTDAN--AKWFLDNTKRGDIVIVKNTI 358


>gi|45382789|ref|NP_989998.1| matrix metalloproteinase-9 [Gallus gallus]
 gi|12043935|gb|AAG47650.1|AF222690_1 75 kDa gelatinase [Gallus gallus]
          Length = 686

 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G +  ++    +    +  A++  Q + GL+ +G +D+STLEAM  P
Sbjct: 47  LLRFGYIQEAEVRRSSKHVSLAKALRRMQKQLGLEETGELDASTLEAMRAP 97


>gi|297687615|ref|XP_002821303.1| PREDICTED: matrix metalloproteinase-21-like [Pongo abelii]
          Length = 569

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
            A +  AV+ FQ  + L  SG +D +TL  MN P
Sbjct: 82  GAALAEAVRRFQRANALPASGELDVATLATMNRP 115


>gi|259503864|ref|ZP_05746766.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
 gi|259168165|gb|EEW52660.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
          Length = 926

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 28/85 (32%), Gaps = 10/85 (11%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
            YQ I +    P      +  G   V    ++ RL        +  +   +      A+ 
Sbjct: 690 NYQQIQAN---PSEVGHNIGPGYEGVKTWFIKSRL-------GTANIHNQYTMGDAYAIM 739

Query: 144 LFQMRHGLDPSGMVDSSTLEAMNVP 168
             Q  HGL  +G VD  T  A+   
Sbjct: 740 NIQRSHGLPATGWVDLPTWRALGYS 764


>gi|320094720|ref|ZP_08026474.1| hypothetical protein HMPREF9005_1086 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978362|gb|EFW09951.1| hypothetical protein HMPREF9005_1086 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 476

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 14/37 (37%), Gaps = 2/37 (5%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWL 356
           +  MH  P    F       + GC+ +   ++   W+
Sbjct: 428 SYAMHGAPWVARFGIGSDASSHGCINM--PVEEAQWM 462


>gi|145341184|ref|XP_001415693.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144575916|gb|ABO93985.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 210

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           ERL+    L      +  F      AVK +Q   G++P+G+   ++ EA
Sbjct: 5   ERLLA---LPNGGLPTGFFGPSTTEAVKKWQKVRGIEPTGVFGDASREA 50


>gi|332854690|ref|ZP_08435477.1| lytic murein transglycosylase [Acinetobacter baumannii 6013150]
 gi|332865570|ref|ZP_08436410.1| lytic murein transglycosylase [Acinetobacter baumannii 6013113]
 gi|332727847|gb|EGJ59249.1| lytic murein transglycosylase [Acinetobacter baumannii 6013150]
 gi|332735222|gb|EGJ66299.1| lytic murein transglycosylase [Acinetobacter baumannii 6013113]
          Length = 416

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 347 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 404

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 405 AFRQEQARKMMQ 416


>gi|114705563|ref|ZP_01438466.1| hypothetical protein FP2506_13894 [Fulvimarina pelagi HTCC2506]
 gi|114538409|gb|EAU41530.1| hypothetical protein FP2506_13894 [Fulvimarina pelagi HTCC2506]
          Length = 268

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 10/118 (8%)

Query: 45  HSIVNDRFDNFLARVDMGIDSDIPIISKETIA-QTEKAIAFYQDILSRGGWPELPIRPLH 103
             + +   D   A        + P   +     +   A+   +  L        PI PL 
Sbjct: 154 GRLADRLADGDYAGFAR--RYNGPGYRRNAYDTKIATALKRARAALETTD----PIGPLA 207

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
           +G     V RL++ L  +G    +  +   F +   +A+  +Q   GL  +G+ D  T
Sbjct: 208 IGARGRVVLRLQDALRSAG---SAIRVDGLFGSRTAAALAAWQAAAGLPATGVADERT 262


>gi|209528064|ref|ZP_03276542.1| OpcA protein [Arthrospira maxima CS-328]
 gi|209491488|gb|EDZ91865.1| OpcA protein [Arthrospira maxima CS-328]
          Length = 443

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 7/64 (10%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV-----PV 169
           ++ L   G       +          AV+  Q  + L  +G VDS TLE +         
Sbjct: 58  QQLLGGLGFYK--GAIDGIHGTETRDAVRDAQKAYQLPITGRVDSDTLEHLRTEFAKLSP 115

Query: 170 DLRI 173
           + R+
Sbjct: 116 EQRV 119


>gi|148683759|gb|EDL15706.1| matrix metallopeptidase 28 (epilysin), isoform CRA_c [Mus musculus]
          Length = 529

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 62  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 120

Query: 167 VP 168
            P
Sbjct: 121 RP 122


>gi|148683761|gb|EDL15708.1| matrix metallopeptidase 28 (epilysin), isoform CRA_e [Mus musculus]
          Length = 553

 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 62  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 120

Query: 167 VP 168
            P
Sbjct: 121 RP 122


>gi|332873283|ref|ZP_08441238.1| lytic murein transglycosylase [Acinetobacter baumannii 6014059]
 gi|322506216|gb|ADX01670.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           baumannii 1656-2]
 gi|332738489|gb|EGJ69361.1| lytic murein transglycosylase [Acinetobacter baumannii 6014059]
          Length = 416

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 347 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 404

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 405 AFRQEQARKMMQ 416


>gi|289771425|ref|ZP_06530803.1| membrane protein [Streptomyces lividans TK24]
 gi|289701624|gb|EFD69053.1| membrane protein [Streptomyces lividans TK24]
          Length = 226

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHG---LDPSGMV 157
              G  +  V RL  +L+  G       G    +       V+ FQ   G       G  
Sbjct: 157 FRPGADNPYVTRLGRQLVRKGFGTYYTRGPGPRWGEADRRGVQAFQRAQGWRGGAADGYP 216

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 217 GPETWRRL 224


>gi|256377950|ref|YP_003101610.1| peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
 gi|255922253|gb|ACU37764.1| Peptidoglycan-binding domain 1 protein [Actinosynnema mirum DSM
           43827]
          Length = 164

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 2/55 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
           V  L+E L               F    E AV+  Q   G+   G     T +AM
Sbjct: 92  VLVLQESLNAC--YGQGLVEDGDFGGNTERAVRNVQAIIGVPVDGRAGPITRKAM 144


>gi|217071900|gb|ACJ84310.1| unknown [Medicago truncatula]
          Length = 330

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL 151
           P  P + L        + ++++ L   G L+ S   +   D     A+K +Q    +
Sbjct: 78  PSPPSQLLK----YKGLDQIKQYLQNFGYLEQSGPFNNTLDQETVLALKTYQRYFNI 130


>gi|254466552|ref|ZP_05079963.1| putative transglycolase [Rhodobacterales bacterium Y4I]
 gi|206687460|gb|EDZ47942.1| putative transglycolase [Rhodobacterales bacterium Y4I]
          Length = 410

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 11/73 (15%)

Query: 99  IRPLHLG--------NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
             PL  G             +  L++RL   G    + G          +A+  +Q   G
Sbjct: 338 GGPLRTGFPPDSYGLTKDDRI-LLQKRLTAKGF--DTGGADGVLGPKSRAAISGYQSSRG 394

Query: 151 LDPSGMVDSSTLE 163
           L  +G    + L 
Sbjct: 395 LPVTGDPSPALLA 407


>gi|254424330|ref|ZP_05038048.1| opcA protein [Synechococcus sp. PCC 7335]
 gi|196191819|gb|EDX86783.1| opcA protein [Synechococcus sp. PCC 7335]
          Length = 441

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +++ L   G       +  +       A+   Q   GL  SG VD+ TL  + 
Sbjct: 54  EIQQLLASLGFYAGE--IDGSHGNDTREAILAAQQDFGLRLSGQVDTETLARLR 105


>gi|195153567|ref|XP_002017696.1| GL17167 [Drosophila persimilis]
 gi|198460451|ref|XP_001361721.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
 gi|194113492|gb|EDW35535.1| GL17167 [Drosophila persimilis]
 gi|198137022|gb|EAL26300.2| GA18484 [Drosophila pseudoobscura pseudoobscura]
          Length = 586

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 14/92 (15%)

Query: 118 LIISGDLDPSK---GLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L  S      S   D     +A++ FQ   GL+ +G +D  TL+ M++P     
Sbjct: 37  LSQFGYLPASARNPANSGLQDKSTWLNAIQEFQNFAGLNITGELDDETLKLMSLPRCGVR 96

Query: 169 -----VDLRIRQLQVNLMRIKKLLEQKMGLRY 195
                 D R ++  +   R +         +Y
Sbjct: 97  DRVGTGDSRSKRYALQGSRWRVKNLTYKVSKY 128


>gi|110634376|ref|YP_674584.1| lytic murein transglycosylase [Mesorhizobium sp. BNC1]
 gi|110285360|gb|ABG63419.1| lytic murein transglycosylase [Chelativorans sp. BNC1]
          Length = 394

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 2/63 (3%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    R    G    +++ L+++L   G       +          AV+  Q+R GL 
Sbjct: 322 GAPAFDARNPEQGLEPENMKILQQKLQALGY--HVGEVDGILGFNTREAVRQEQLRQGLP 379

Query: 153 PSG 155
             G
Sbjct: 380 ADG 382


>gi|157146473|ref|YP_001453792.1| hypothetical protein CKO_02233 [Citrobacter koseri ATCC BAA-895]
 gi|157083678|gb|ABV13356.1| hypothetical protein CKO_02233 [Citrobacter koseri ATCC BAA-895]
          Length = 525

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              +  L + L  +  L+     S ++ A +    + FQ + GL   G+    TL  +  
Sbjct: 442 DKDLAWLDQTLSQT--LNEPLTHSRSWTAELAKRTREFQDKAGLHVDGIAGEETLMQLMR 499

Query: 168 PVDLRIRQLQVNLMRIK 184
             +     L   L + +
Sbjct: 500 ATNSVPGVLAQTLSQKQ 516


>gi|11935132|gb|AAG41981.1| matrix metalloproteinase 28 [Homo sapiens]
          Length = 520

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|121606027|ref|YP_983356.1| extracellular solute-binding protein [Polaromonas naphthalenivorans
           CJ2]
 gi|120594996|gb|ABM38435.1| extracellular solute-binding protein, family 1 [Polaromonas
           naphthalenivorans CJ2]
          Length = 524

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 53/191 (27%), Gaps = 28/191 (14%)

Query: 114 LRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           LRE  I+ G LD +   L   F    + A + FQ   G+   G++               
Sbjct: 129 LREAQILLGKLDYNAGPLDGTFGPQTQVATEAFQESQGVTVDGLIT-------------- 174

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAA----SLEAVENGKVGLRSTVIVGRVDRQT 228
              + +NL R              ++N P       L+  E          I    D   
Sbjct: 175 -ATVLMNLRRAVNGAGASAKETVRVLNWPDYIDAGVLQDFEKENNIRVVYDIFTSNDDLQ 233

Query: 229 PILHSRIN-RIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVD 287
             L +      +  P      ++  K ++         L   ++  +      V      
Sbjct: 234 ARLRAGGTPYDVVFPTANAVPAMAAKGLLGK-------LDKASLKNLGNIDPRVDATLRA 286

Query: 288 WNSPEPPNFIF 298
           W+     +  +
Sbjct: 287 WDKDGSYSLPY 297


>gi|298485427|ref|ZP_07003514.1| Hrp-associated lytic transglycosylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160047|gb|EFI01081.1| Hrp-associated lytic transglycosylase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 413

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 20/59 (33%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V  L++ L   G             A   +A++ +Q    L P G   +  LE +  
Sbjct: 357 AQVTDLQKLLTAKGY--SLGAADGVIGAMTRAAIRAYQKDQHLPPDGYASTVLLERLRR 413


>gi|309371391|emb|CAP28733.3| CBR-ZMP-1 protein [Caenorhabditis briggsae AF16]
          Length = 517

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L    G +      +  A+K  Q   GL+ +G +D  T   M  P
Sbjct: 28  LQKYGYLPR--GSNQLSSTSLSEALKNMQRMAGLEETGELDERTKRMMERP 76


>gi|170726300|ref|YP_001760326.1| lytic murein transglycosylase [Shewanella woodyi ATCC 51908]
 gi|169811647|gb|ACA86231.1| lytic murein transglycosylase [Shewanella woodyi ATCC 51908]
          Length = 395

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
             V++L+ +L   G             A  +S ++ FQ   GL   G    ++  A+ V
Sbjct: 338 ARVKQLQAKLNEKGF--DVGKPDGVLGANSKSGLREFQRSAGLVADGFPSEASFNALGV 394


>gi|88813298|ref|ZP_01128537.1| hypothetical protein NB231_07362 [Nitrococcus mobilis Nb-231]
 gi|88789470|gb|EAR20598.1| hypothetical protein NB231_07362 [Nitrococcus mobilis Nb-231]
          Length = 173

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 50/179 (27%), Gaps = 27/179 (15%)

Query: 184 KKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH----SRINRIM 239
           +   + +   R+VL+ +    L   +  ++     V  GR      +         + I 
Sbjct: 6   RSEPDSEGAARWVLIELGTQRLHLYQANRLLSSYLVSSGRNGVGEQMGSGCTPRGWHVIR 65

Query: 240 FNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFR 299
                  P   +              L +         G++  +  + W S     F   
Sbjct: 66  ARIGANQPLGAVFVGRRPTGEIYSPALANR------YPGRDWILTRILWLSGLEQGF--- 116

Query: 300 QDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII--DLDVWL 356
                 N + S       R   Y+H  P  +         + GC+R+ N    +L   +
Sbjct: 117 ------NRLGSVD---SMRRFIYIHGAPANVPLG---LPASKGCIRMGNADVVELFEAV 163


>gi|291388662|ref|XP_002710873.1| PREDICTED: matrix metalloproteinase 24 [Oryctolagus cuniculus]
          Length = 574

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDL-DPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L       S       ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 14  LKSYGYLLPYDARASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 66


>gi|229368716|gb|ACQ62999.1| matrix metalloproteinase 24 preproprotein (predicted), 5 prime
           [Dasypus novemcinctus]
          Length = 245

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 3   LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 55


>gi|169731509|gb|ACA64881.1| matrix metalloproteinase 24 preproprotein (predicted) [Callicebus
           moloch]
          Length = 595

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 30  RLANWLKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 87


>gi|168984487|emb|CAI24737.2| matrix metalloproteinase 28 (epilysin) [Mus musculus]
          Length = 407

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 111 VQRLRE----RLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +  LR+     L   G L      + A  A   +A++ FQ    L  SG++D +TL  M 
Sbjct: 29  LPELRQEAEAFLEKYGYLSEQGSKAPA-SAQFRNAIREFQWISQLPLSGVLDQATLRQMT 87

Query: 167 VP 168
            P
Sbjct: 88  RP 89


>gi|149733599|ref|XP_001499275.1| PREDICTED: similar to matrix metalloproteinase 24 preproprotein
           (predicted) [Equus caballus]
          Length = 666

 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 101 RLANWLKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 158


>gi|311895838|dbj|BAJ28246.1| putative hydrolase [Kitasatospora setae KM-6054]
          Length = 484

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 14/125 (11%)

Query: 56  LARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLR 115
            AR    + S  P +                          +P R L LG++   V  ++
Sbjct: 352 TARPTQAVTSKAPAVPTNQAPVAVAPSTSAAAPSPSPTPSFVPGRVLRLGDTGPEVVAMQ 411

Query: 116 ERLII-----SGDLDP---SKGLSVAFDAYVESAVKLFQ----MRHGLD--PSGMVDSST 161
             L+       G LD           F ++  S +  FQ      H L     G  D+ T
Sbjct: 412 RLLMAYNCNNIGPLDQNRTDLTNQPGFGSWTLSVLSSFQQDQKQAHNLRGFQPGTYDAPT 471

Query: 162 LEAMN 166
            EA+ 
Sbjct: 472 QEALQ 476


>gi|126724804|ref|ZP_01740647.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150]
 gi|126705968|gb|EBA05058.1| Peptidoglycan-binding domain 1 [Rhodobacterales bacterium HTCC2150]
          Length = 546

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 116 ERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           ++L   G       +          A++ FQ    L  +G +  ST+
Sbjct: 495 QKLTKLGF--EPGRIDGKLSEETRRAIRRFQRAANLPVTGYLSRSTV 539


>gi|126642983|ref|YP_001085967.1| putative membrane-bound lytic murein transglycosylase
           [Acinetobacter baumannii ATCC 17978]
          Length = 348

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 279 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 336

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 337 AFRQEQARKMMQ 348


>gi|319785587|ref|YP_004145063.1| peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
            biserrulae WSM1271]
 gi|317171475|gb|ADV15013.1| Peptidoglycan-binding domain 1 protein [Mesorhizobium ciceri biovar
            biserrulae WSM1271]
          Length = 1345

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 110  SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +VQ ++  L  +G    + G         ++A+  FQ  + +  +G VD + ++A+
Sbjct: 1288 AVQNIQRILNKNGY--DAGGADGKMGQKTKTAIMAFQTDNKMAATGEVDENLVKAL 1341


>gi|296199747|ref|XP_002747296.1| PREDICTED: matrix metalloproteinase-24 [Callithrix jacchus]
          Length = 595

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           RL   L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 30  RLANWLKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 87


>gi|27375875|ref|NP_767404.1| hypothetical protein bll0764 [Bradyrhizobium japonicum USDA 110]
 gi|27349013|dbj|BAC46029.1| bll0764 [Bradyrhizobium japonicum USDA 110]
          Length = 468

 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 36/104 (34%), Gaps = 17/104 (16%)

Query: 90  SRGGWPELPIRPLHLGNSSV-SVQRLR------------ERLIISGDLD----PSKGLSV 132
           ++   P++P        +       L+            ERL +  DL      +  ++ 
Sbjct: 34  AQMTTPQIPGTKPKTVQTVPIRPPALQTPSETADAMAQAERLSLQSDLAWVGQYNGAITG 93

Query: 133 AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQL 176
                + +A+K +Q   G  P+G+++     A+      +   +
Sbjct: 94  EVSERMVNAIKEYQKNKGGKPTGVLNPQERAALAETARRKQDSV 137


>gi|194100557|ref|YP_002003882.1| gp43 [Mycobacterium phage Nigel]
 gi|192758273|gb|ACF05046.1| gp43 [Mycobacterium phage Nigel]
          Length = 442

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 22/51 (43%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           +G+   ++   +++L       P+   +  + A   +A+  +Q R  ++  
Sbjct: 13  VGDVDPNIVLAKQKLAKYSYGKPANDGTPIYTAEFGAALAEYQRRRNVEID 63


>gi|1658112|gb|AAD13803.1| membane-type 1 metalloproteinase precursor [Oryctolagus cuniculus]
          Length = 572

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADTDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|239627713|ref|ZP_04670744.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517859|gb|EEQ57725.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 478

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 16/55 (29%), Gaps = 6/55 (10%)

Query: 311 TKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
             + F       +HD      F         + GC+ +      +L   + K  P
Sbjct: 421 YWMPFNG--GIGLHDANWRSKFGGAIYQTSGSHGCINLPPAKAKELYGLVYKGMP 473


>gi|198429635|ref|XP_002120500.1| PREDICTED: similar to matrix metalloproteinase 21 (predicted)
           [Ciona intestinalis]
          Length = 854

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 18/157 (11%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           + RER    G            D     A+  FQ  +GL+ +G++D  T+  +   +   
Sbjct: 179 QFRERFKAMG------------DEEFLVALSNFQHANGLNITGVLDEETM-MIMTQLRCG 225

Query: 173 IRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILH 232
           +  L VN        +        +   P  +    ++G                 P L 
Sbjct: 226 VPDLTVNPNITTSTGDPSDSDTESVTITPQINDIIADSGSAEGSGRAEP--PTTAFPYLT 283

Query: 233 SRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDN 269
           +   R++    +  P  + +   +    ++ +Y+++ 
Sbjct: 284 TFSPRMVRKRRFSEPPLVHR---LTERAENAEYMENE 317


>gi|118100493|ref|XP_417326.2| PREDICTED: similar to MMP24 protein [Gallus gallus]
          Length = 565

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGL--SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L PS     +      V+SAV   Q  +G+  +G++D +TLE M  P
Sbjct: 5   LKTYGYLLPSDSQMSAAQSGKAVQSAVATMQQFYGIPVTGVLDQTTLEWMKKP 57


>gi|13591995|ref|NP_112318.1| matrix metalloproteinase-14 [Rattus norvegicus]
 gi|146345458|sp|Q10739|MMP14_RAT RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT-MMP; Short=MT1-MMP; Short=MT1MMP; Flags:
           Precursor
 gi|1001927|emb|CAA62897.1| membrane-type metalloproteinase [Rattus norvegicus]
 gi|47939003|gb|AAH72509.1| Mmp14 protein [Rattus norvegicus]
 gi|149063898|gb|EDM14168.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
           [Rattus norvegicus]
 gi|149063899|gb|EDM14169.1| matrix metallopeptidase 14 (membrane-inserted), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLQVTGKADSDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|805013|emb|CAA58521.1| MT-MMP [Rattus norvegicus]
          Length = 582

 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  DS T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAIAAIQRFYGLQVTGKADSDTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|193783707|dbj|BAG53618.1| unnamed protein product [Homo sapiens]
          Length = 510

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|288557361|ref|NP_001165700.1| matrix metalloproteinase-28 a [Xenopus laevis]
 gi|122894094|gb|ABM67693.1| matrix metalloproteinase-28 [Xenopus laevis]
          Length = 496

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+ +          + SAV+ FQ    L  SG +D+ST++ M  P
Sbjct: 36  LEKYGYLEETTKQHS--GKQLASAVREFQWLSHLSVSGELDTSTVQQMIQP 84


>gi|92119372|ref|YP_579101.1| hypothetical protein Nham_3965 [Nitrobacter hamburgensis X14]
 gi|91802266|gb|ABE64641.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Nitrobacter hamburgensis X14]
          Length = 520

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 20/67 (29%), Gaps = 12/67 (17%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           N   +H  P P          + GCVR+         L   T    R  +  ++      
Sbjct: 128 NGLALHGGPLPGY------AASHGCVRM--PYGFAEKLFDKT----RIGMRVIISPNDAA 175

Query: 379 PVKLATE 385
           PV  +  
Sbjct: 176 PVDFSHP 182


>gi|255958232|ref|NP_001157646.1| matrix metalloproteinase 1 isoform 1 [Tribolium castaneum]
 gi|270008219|gb|EFA04667.1| matrix metalloproteinase 1 [Tribolium castaneum]
          Length = 581

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 118 LIISGDLD---PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L     S   S   D   +  AV+ FQ   GLD +G +D  TL+ M +P     
Sbjct: 31  LSQYGYLGGNLRSLNSSALTDERVLRKAVEDFQSFAGLDVTGELDDRTLKEMQLPRCGVK 90

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R K
Sbjct: 91  DKVGTGDNRAKRYALQGSRWK 111


>gi|108757447|ref|YP_634531.1| hypothetical protein MXAN_6407 [Myxococcus xanthus DK 1622]
 gi|108461327|gb|ABF86512.1| hypothetical protein MXAN_6407 [Myxococcus xanthus DK 1622]
          Length = 381

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 2/53 (3%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           + RL   G              +   A++ FQ  H L  +  +D +T   +  
Sbjct: 327 QARLCHLGY--SCGEEDGVMGPWTRRALRDFQRDHDLPVTCELDDATRTRLRA 377


>gi|13027664|gb|AAG34676.2|AF306662_1 matrix metalloprotease MT1-MMP [Cricetulus griseus]
          Length = 582

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +AV   Q  +GL  +G  D  T++AM  P     D 
Sbjct: 39  LQQYGYLPPGDLRTHTQRSPQSLSAAVAAMQRFYGLQVTGKADLDTMKAMKRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGTEIKANVRRKR 111


>gi|13236530|ref|NP_077278.1| matrix metalloproteinase-28 isoform 1 preproprotein [Homo sapiens]
 gi|37538314|sp|Q9H239|MMP28_HUMAN RecName: Full=Matrix metalloproteinase-28; Short=MMP-28; AltName:
           Full=Epilysin; Flags: Precursor
 gi|12698338|gb|AAK01480.1|AF219624_1 matrix metalloproteinase-28 precursor [Homo sapiens]
 gi|12698852|gb|AAK01706.1|AF330002_1 matrix metalloprotease MMP25 [Homo sapiens]
 gi|37183092|gb|AAQ89346.1| metalloprotease [Homo sapiens]
 gi|119600534|gb|EAW80128.1| matrix metallopeptidase 28, isoform CRA_a [Homo sapiens]
          Length = 520

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 16/82 (19%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRE----RLIISGDLD---PSKGLSVAFDAYVESAVKLFQ 146
           W  L  +P   G        LR+     L   G L+   P    S  F      A++ FQ
Sbjct: 17  WGHLDAQPAERGGQ-----ELRKEAEAFLEKYGYLNEQVPKAPTSTRF----SDAIRAFQ 67

Query: 147 MRHGLDPSGMVDSSTLEAMNVP 168
               L  SG++D +TL  M  P
Sbjct: 68  WVSQLPVSGVLDRATLRQMTRP 89


>gi|119387337|ref|YP_918371.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377912|gb|ABL72675.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 244

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 5/124 (4%)

Query: 43  SYHSIVNDRFDNFL-ARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPIRP 101
                    F             S +        A   +A    + +      PE P   
Sbjct: 37  LQQEQDRAAFSQAQNTNTLSAYQSYLRQFPNGMYAA--QARDRVERLGGATSRPETPSAA 94

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSST 161
                ++     ++ RL   G    + G+  +F      A+ L+Q       +G ++++ 
Sbjct: 95  DTASLTAQQRLEIQRRLNALGY--ETNGVDGSFGPGTRRAIALWQRDRNYSQTGALNAAQ 152

Query: 162 LEAM 165
              +
Sbjct: 153 ANEI 156


>gi|256787530|ref|ZP_05525961.1| membrane protein [Streptomyces lividans TK24]
          Length = 294

 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 4/68 (5%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSK-GLSVAFDAYVESAVKLFQMRHG---LDPSGMV 157
              G  +  V RL  +L+  G       G    +       V+ FQ   G       G  
Sbjct: 225 FRPGADNPYVTRLGRQLVRKGFGTYYTRGPGPRWGEADRRGVQAFQRAQGWRGGAADGYP 284

Query: 158 DSSTLEAM 165
              T   +
Sbjct: 285 GPETWRRL 292


>gi|225414494|ref|ZP_03761683.1| hypothetical protein CLOSTASPAR_05717 [Clostridium asparagiforme
           DSM 15981]
 gi|225041984|gb|EEG52230.1| hypothetical protein CLOSTASPAR_05717 [Clostridium asparagiforme
           DSM 15981]
          Length = 466

 Score = 37.7 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 15/62 (24%), Gaps = 10/62 (16%)

Query: 303 GKINAMASTK------IEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRVRNIIDLDV 354
           G   A  S +                +HD      F         + GCV +    D   
Sbjct: 393 GPKKADGSYEYESHVDFWMPFNGGIGLHDANWRGSFGGTIYQTSGSHGCVNL--PPDRAK 450

Query: 355 WL 356
            L
Sbjct: 451 IL 452


>gi|321314927|ref|YP_004207214.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
 gi|320021201|gb|ADV96187.1| putative phage N-acetylmuramoyl-L-alanine amidase [Bacillus
           subtilis BSn5]
          Length = 80

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%)

Query: 137 YVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
               AV+ FQ+ +GL+P+G+    T   + 
Sbjct: 47  ETNDAVRRFQLMNGLNPNGIYGPKTKAKLE 76


>gi|255958234|ref|NP_001157647.1| matrix metalloproteinase 1 isoform 2 [Tribolium castaneum]
          Length = 550

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 14/81 (17%)

Query: 118 LIISGDLD---PSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----- 168
           L   G L     S   S   D   +  AV+ FQ   GLD +G +D  TL+ M +P     
Sbjct: 31  LSQYGYLGGNLRSLNSSALTDERVLRKAVEDFQSFAGLDVTGELDDRTLKEMQLPRCGVK 90

Query: 169 -----VDLRIRQLQVNLMRIK 184
                 D R ++  +   R K
Sbjct: 91  DKVGTGDNRAKRYALQGSRWK 111


>gi|92115679|ref|YP_575408.1| peptidoglycan binding domain-containing protein [Nitrobacter
           hamburgensis X14]
 gi|91798573|gb|ABE60948.1| Peptidoglycan-binding domain 1 [Nitrobacter hamburgensis X14]
          Length = 448

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            +  + Q L+  L  +G    +  ++      + +A+K FQ   G   +G+++     A+
Sbjct: 51  MTQAARQALQSDLAWTGHY--NGIINGEVSDRLIAAIKAFQKDQGGKQTGVLNPQERGAL 108

Query: 166 N 166
            
Sbjct: 109 A 109


>gi|299772105|ref|YP_003734131.1| lytic murein transglycosylase family protein [Acinetobacter sp.
           DR1]
 gi|298702193|gb|ADI92758.1| lytic murein transglycosylase family protein [Acinetobacter sp.
           DR1]
          Length = 430

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 75  IAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAF 134
           IA     +   +   +   WP         G S    + +++ LI  G       +    
Sbjct: 339 IAHLSDRLKGARPFATS--WPTDD-----PGTSRAERREIQQFLINRGY--DIGAVDGLI 389

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
                 A++  Q R GL+PSG      L A       ++ Q
Sbjct: 390 GDKTRVAIRQEQTRLGLNPSGRAGQQILRAFRQEQAQKMMQ 430


>gi|225452578|ref|XP_002280805.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 321

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--------VESAVKLFQMRHGLDPSGMV 157
           +    + +L++ L   G L  +                  +ESA+K +Q  + L  +G +
Sbjct: 56  DKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLKATGKL 115

Query: 158 DSSTLEAMNVP 168
           DS T+  M   
Sbjct: 116 DSETVSEMMRS 126


>gi|326680219|ref|XP_001924042.3| PREDICTED: matrix metalloproteinase-15 [Danio rerio]
          Length = 623

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L  +        +   + SA++  Q  +GL  +G +DS TL AM  P
Sbjct: 39  LRTYGYLSQASRQMSTMQSSQILSSAIRDMQRFYGLQETGHMDSETLRAMKRP 91


>gi|311104883|ref|YP_003977736.1| lytic murein transglycosylase family protein [Achromobacter
           xylosoxidans A8]
 gi|310759572|gb|ADP15021.1| lytic murein transglycosylase family protein [Achromobacter
           xylosoxidans A8]
          Length = 415

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 30/92 (32%), Gaps = 12/92 (13%)

Query: 81  AIAFYQDILSRGG-----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           AIA   D L  GG     WP         G S    + L+  LI  G             
Sbjct: 326 AIAHLSDRLRGGGPLAQAWPTDD-----PGLSRAQRRELQRLLIARGY--EIGEPDGMIG 378

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                A++  Q   GL P G     +L+A+  
Sbjct: 379 KRTREALQTVQRELGLRPDGRAGLKSLQALQA 410


>gi|218130612|ref|ZP_03459416.1| hypothetical protein BACEGG_02201 [Bacteroides eggerthii DSM 20697]
 gi|217986956|gb|EEC53287.1| hypothetical protein BACEGG_02201 [Bacteroides eggerthii DSM 20697]
          Length = 171

 Score = 37.7 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 4/65 (6%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGL----SVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
           G     +  L   L   G  D            FD  +E  ++  Q ++G+   G+    
Sbjct: 106 GMYGADIDMLAAILDSKGLYDKQHVTKIKGMTCFDLRMEQCIRNIQAKYGMTVDGVCTRE 165

Query: 161 TLEAM 165
            L  +
Sbjct: 166 VLSKI 170


>gi|332846033|ref|XP_001150678.2| PREDICTED: matrix metalloproteinase-15 isoform 1 [Pan troglodytes]
          Length = 669

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 6/71 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P     D 
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRPRCGVPDQ 116

Query: 172 RIRQLQVNLMR 182
              +++ NL R
Sbjct: 117 FGVRVKANLRR 127


>gi|222086465|ref|YP_002544999.1| membrane-bound lytic murein transglycosylase protein [Agrobacterium
           radiobacter K84]
 gi|221723913|gb|ACM27069.1| membrane-bound lytic murein transglycosylase protein [Agrobacterium
           radiobacter K84]
          Length = 414

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 13/147 (8%)

Query: 19  ILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQT 78
              +G+   +   +   L   +                    +G +      +      T
Sbjct: 281 WFQLGVKPRDGNTNFGSLPAALILPQGRKGPAFLTYPNYNAYLGWNQSFIYTTSAAYFAT 340

Query: 79  EKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             +           G P         G + V ++ L+ +L   G       +     +  
Sbjct: 341 RLS-----------GAPTYNKGMPEEGLNDVDMKALQTKLQARGY--DVGKIDGILGSGT 387

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             A++  Q R GL   G    + L A+
Sbjct: 388 RVAIQKEQFRLGLPADGWATQALLSAL 414


>gi|160875817|ref|YP_001555133.1| lytic murein transglycosylase [Shewanella baltica OS195]
 gi|160861339|gb|ABX49873.1| lytic murein transglycosylase [Shewanella baltica OS195]
 gi|315268008|gb|ADT94861.1| lytic murein transglycosylase [Shewanella baltica OS678]
          Length = 438

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 24/78 (30%), Gaps = 2/78 (2%)

Query: 91  RGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            GG P     P     S   V++L+ +L  +G                 + ++ FQ    
Sbjct: 362 NGGLPLTVSPPEQPRLSREQVKQLQAKLNEAGF--DVGKPDGVLGRNSVAGLQAFQRSKQ 419

Query: 151 LDPSGMVDSSTLEAMNVP 168
           +   G        A+ + 
Sbjct: 420 MIADGFPSQEVFSALGLS 437


>gi|124504280|gb|AAI28677.1| Mmp-9th protein [Xenopus laevis]
          Length = 674

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVD 158
              +    +SV V      L+  G L   +G +      ++ A+   Q + GL  +G +D
Sbjct: 33  PGEIRNNMTSVEVAE--WYLVKFGYLPLQQGSNHH--VSLKKALSQMQSKLGLKVTGNLD 88

Query: 159 SSTLEAMNVP 168
           + TL+AM  P
Sbjct: 89  AETLDAMKTP 98


>gi|27806001|ref|NP_776815.1| matrix metalloproteinase-14 precursor [Bos taurus]
 gi|75056123|sp|Q9GLE4|MMP14_BOVIN RecName: Full=Matrix metalloproteinase-14; Short=MMP-14; AltName:
           Full=Membrane-type matrix metalloproteinase 1;
           Short=MT-MMP 1; Short=MTMMP1; AltName:
           Full=Membrane-type-1 matrix metalloproteinase;
           Short=MT1-MMP; Short=MT1MMP; Flags: Precursor
 gi|11055605|gb|AAG28170.1|AF290429_1 membrane-type matrix metalloprotease 1 [Bos taurus]
          Length = 582

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L   G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 38  LQQHGYLPPGDLRTHTQRSPQSLSAAIAAMQRFYGLRVTGKADADTMKAMRRPRCGVPDK 97

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 98  FGAEIKANVRRKR 110


>gi|298527991|ref|ZP_07015395.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511643|gb|EFI35545.1| Peptidoglycan-binding domain 1 protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 418

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 33/95 (34%), Gaps = 14/95 (14%)

Query: 69  IISKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNS--------SVSVQRLRERLII 120
           + + E   + +K +   +    R   P     PL  G S           +  ++ RL  
Sbjct: 315 LFTPEKDYEGQKKVQRERMSQQREHTPR--EGPLSRGESVLDTSDRSDARI--IQTRLAE 370

Query: 121 SGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
            G    +  +   +      A++ FQ   GL+ SG
Sbjct: 371 LGYY--NMIIDGLWGPGSRGALEQFQRSSGLEASG 403


>gi|119605820|gb|EAW85414.1| hCG15613, isoform CRA_b [Homo sapiens]
          Length = 235

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G +D  T+  M  P
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKP 88


>gi|73992282|ref|XP_542973.2| PREDICTED: similar to Matrix metalloproteinase-24 precursor
           (MMP-24) (Membrane-type matrix metalloproteinase 5)
           (MT-MMP 5) (Membrane-type-5 matrix metalloproteinase)
           (MT5-MMP) [Canis familiaris]
          Length = 626

 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 66  LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 118


>gi|323516092|gb|ADX90473.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 378

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 2/72 (2%)

Query: 104 LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
            G S    + +++ LI  G       +          A++  Q R GL+P+G      L 
Sbjct: 309 PGTSRAERREIQQFLINRGY--DIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILR 366

Query: 164 AMNVPVDLRIRQ 175
           A       ++ Q
Sbjct: 367 AFRQEQARKMMQ 378


>gi|222085601|ref|YP_002544131.1| hypothetical protein Arad_1877 [Agrobacterium radiobacter K84]
 gi|221723049|gb|ACM26205.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 422

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 42/148 (28%), Gaps = 14/148 (9%)

Query: 95  PELPIRPL-----HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH 149
           P +   PL       G    +V+ L+  L   G    +             A+  F+  H
Sbjct: 205 PPVDQAPLSILMTRRGLR-ENVRDLQGLLNALGF--ATGTPDGLLGPATVQAIGDFKKAH 261

Query: 150 GLDPSG-MVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           G+  SG +V  + ++A+              ++R       +             +    
Sbjct: 262 GITTSGSLVSPALMKAVYAAAGKGEPPNGAIMVRQNFKPLFEAPAIIAEPQEALGTHFFT 321

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRIN 236
            N         I G+ D     L   ++
Sbjct: 322 AN-----TVDRINGKTDWFGVTLEDDLS 344


>gi|281182734|ref|NP_001162479.1| matrix metalloproteinase-24 [Papio anubis]
 gi|297259948|ref|XP_001100890.2| PREDICTED: matrix metalloproteinase-24 [Macaca mulatta]
 gi|164623742|gb|ABY64668.1| matrix metallopeptidase 24 (predicted) [Papio anubis]
          Length = 598

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 38  LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 90


>gi|27376609|ref|NP_768138.1| transglycolase [Bradyrhizobium japonicum USDA 110]
 gi|27349750|dbj|BAC46763.1| bll1498 [Bradyrhizobium japonicum USDA 110]
          Length = 515

 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L   G           F      A++ FQ   G+   G   S  LE + 
Sbjct: 462 ELQQLLAQRGFYK--GTPDGQFGGQTREALRNFQASIGVPADGFASSDVLERLR 513


>gi|115610712|ref|XP_781575.2| PREDICTED: similar to matrix metalloproteinase 14
           [Strongylocentrotus purpuratus]
 gi|115961219|ref|XP_001188043.1| PREDICTED: similar to matrix metalloproteinase 14
           [Strongylocentrotus purpuratus]
          Length = 509

 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L  S   +        V  A+K FQ    +D +G +D+ T+  M +P
Sbjct: 11  LMNYGYLKQSDMANGQLTTEGDVVKALKQFQYMANIDETGTLDNDTMRMMKMP 63


>gi|254437459|ref|ZP_05050953.1| ErfK/YbiS/YcfS/YnhG family [Octadecabacter antarcticus 307]
 gi|198252905|gb|EDY77219.1| ErfK/YbiS/YcfS/YnhG family [Octadecabacter antarcticus 307]
          Length = 258

 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 36/103 (34%), Gaps = 15/103 (14%)

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP---------PNFIFRQDPGKINAM 308
             R+ P  +    + +      ++  E   W   +            F    + G  + +
Sbjct: 96  QARRYPIAVGRQGLSLNRPTVVQLKREWPGWTPTQNMLRTQPEVYGPFARGVEGGLASPL 155

Query: 309 ASTKIE-FYSRNNTY--MHDTPEPILFNNVVRFETSGCVRVRN 348
            +  +  F +  +T+  +H T +     N     ++GC+R+ N
Sbjct: 156 GARALYLFQNGRDTHFRIHGTNDLSSIGNSG---SAGCIRMFN 195


>gi|147807821|emb|CAN73130.1| hypothetical protein VITISV_030258 [Vitis vinifera]
          Length = 437

 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 8/71 (11%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAY--------VESAVKLFQMRHGLDPSGMV 157
           +    + +L++ L   G L  +                  +ESA+K +Q  + L  +G +
Sbjct: 56  DKVKGIHKLKKYLEQFGYLSYNSHSKNQIRTDDDDYFDDLLESAIKSYQTNYHLKATGKL 115

Query: 158 DSSTLEAMNVP 168
           DS T+  M   
Sbjct: 116 DSETVSEMMRS 126


>gi|291561852|emb|CBL40652.1| Uncharacterized protein conserved in bacteria [butyrate-producing
           bacterium SS3/4]
          Length = 459

 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 25/88 (28%), Gaps = 7/88 (7%)

Query: 265 YLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQD----PGKINAMASTKIEFYSRNN 320
           Y   +   +ID       V +     P      ++Q      G+  A A  K        
Sbjct: 351 YFYKDGKVIIDSPFVSGNVSKNYTTPPGLFELYYKQKDRVLKGEDYA-APVKYWMPFNGG 409

Query: 321 TYMHDTPEPILFN--NVVRFETSGCVRV 346
             +HD      F         + GC+ +
Sbjct: 410 IGLHDADWRSKFGGTIYQTNGSHGCINL 437


>gi|298290355|ref|YP_003692294.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
 gi|296926866|gb|ADH87675.1| ErfK/YbiS/YcfS/YnhG family protein [Starkeya novella DSM 506]
          Length = 225

 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
             + + Q+    +R +     +     ++V++ A     V      LR  V VG+ +   
Sbjct: 55  PAVDLSQIDPRFLRREVAYATREEPGTIVVDVEARYAYLVMENGRALRYGVGVGKEEGFN 114

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
               + I R    P W     +I+++        P+        +    G  +    +  
Sbjct: 115 FRGAATIARKAEWPRWTPTPDMIRRE--------PERYAKYAGGLPGGPGNPLGPRALYL 166

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRV-- 346
              +  + ++R                       +H T EP          +SGC+R+  
Sbjct: 167 YR-DGRDTLYR-----------------------LHGTIEPWTIGT---MVSSGCIRLLN 199

Query: 347 RNIIDLDVWLLKDT 360
           ++IIDL   +   +
Sbjct: 200 QDIIDLYRRVPAGS 213


>gi|115524938|ref|YP_781849.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisA53]
 gi|115518885|gb|ABJ06869.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisA53]
          Length = 403

 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAMNV 167
             VQ ++ RL   G    + G           AV+ FQ++ G L   G      L  +  
Sbjct: 344 AEVQEMQTRLTAQGF--DTGGTDGRVGNDTMKAVRDFQLKAGLLPADGYGGLKVLARLRQ 401


>gi|110633667|ref|YP_673875.1| ErfK/YbiS/YcfS/YnhG [Mesorhizobium sp. BNC1]
 gi|110284651|gb|ABG62710.1| ErfK/YbiS/YcfS/YnhG [Chelativorans sp. BNC1]
          Length = 139

 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 5/51 (9%)

Query: 308 MASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVR--NIIDLDVWL 356
           M+      +      +H T       ++ R  + GCVR+   N   L   +
Sbjct: 78  MSPMPFSIFYHRGYAIHGT---YAVKSLGRRASHGCVRLHPDNAAKLYSLV 125


>gi|167463502|ref|ZP_02328591.1| YkuG [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 668

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 11/116 (9%)

Query: 47  IVNDRFDNFLARVDMGID---SDIP--IISKETIAQTEKAIAFYQDILSRGG---WPELP 98
                 ++        I    +  P    SK  I+  +  +     +    G        
Sbjct: 7   DAQVWLNSTYGNNSKYIRVKETGYPGTATSKALISALQIELG-LSSVTGNFGDMTSKACD 65

Query: 99  IRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
             PL  G++   V+ L+  L   G    S      F+ + ++A+K  Q   GL  +
Sbjct: 66  ANPLGSGSTGNKVKLLQYGLYCKGYNPRS--TDGVFNQHTQNALKSIQQDAGLSEN 119


>gi|71278899|ref|YP_268059.1| putative peptidoglycan-binding protein [Colwellia psychrerythraea
           34H]
 gi|71144639|gb|AAZ25112.1| putative peptidoglycan-binding protein [Colwellia psychrerythraea
           34H]
          Length = 427

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 3/74 (4%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN-V 167
             ++ L+ +L   G    +      +      A++ FQ++H L   G  +      +N V
Sbjct: 355 AQMKNLQSQLNSLGF--ETGEPDGIWGPKSRQAIRSFQLQHQLIADGYPNKEVFVKINLV 412

Query: 168 PVDLRIRQLQVNLM 181
               R     +N  
Sbjct: 413 TNKTRDNMSNINQE 426


>gi|15964289|ref|NP_384642.1| hypothetical protein SMc02231 [Sinorhizobium meliloti 1021]
 gi|15073466|emb|CAC45108.1| Hypothetical protein SMc02231 [Sinorhizobium meliloti 1021]
          Length = 229

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           W   P +   +  +  +V+ ++  L  +G    +            +A+K FQ   G +P
Sbjct: 156 WVGPPTKTATVDMT-RAVRNIQAILNNNGF--DAGKPDGQVGQKTTAAIKAFQKSVGQEP 212

Query: 154 SGMVDSSTLEAM 165
           +G +    +  +
Sbjct: 213 TGEITDGLVREL 224


>gi|319781607|ref|YP_004141083.1| lytic murein transglycosylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167495|gb|ADV11033.1| lytic murein transglycosylase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 406

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            L++RL   G  D             ++A+  FQ + GL   G      L+ +  
Sbjct: 353 ELQKRLSQHGLYD--GKFDGKIGDGSKTAIMAFQAKAGLTQDGYPSMEVLKWLRQ 405


>gi|260427736|ref|ZP_05781715.1| membrane-bound lytic murein transglycosylase B [Citreicella sp.
           SE45]
 gi|260422228|gb|EEX15479.1| membrane-bound lytic murein transglycosylase B [Citreicella sp.
           SE45]
          Length = 415

 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
           L+ +L  +G           F +  E+A++ +Q   GL  +G      L
Sbjct: 363 LQAQLNRAGY--DVGTPDGVFGSKTEAAIRSYQASVGLPVTGEPSRDLL 409


>gi|307307025|ref|ZP_07586764.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
            BL225C]
 gi|306901965|gb|EFN32564.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti
            BL225C]
          Length = 1220

 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 94   WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            W   P +   +  +  +V+ ++  L  +G    +            +A+K FQ   G +P
Sbjct: 1147 WVGPPTKTATVDMT-RAVRNIQAILNNNGF--DAGKPDGQVGQKTTAAIKAFQKSVGQEP 1203

Query: 154  SGMVDSSTLEAM 165
            +G +    +  +
Sbjct: 1204 TGEITDGLVREL 1215


>gi|166831586|gb|ABY90111.1| matrix metalloproteinase 24 preproprotein (predicted) [Callithrix
           jacchus]
          Length = 564

 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 4   LKSYGYLLPYDSRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 56


>gi|118100110|ref|XP_415771.2| PREDICTED: similar to matrix metalloproteinase-28 [Gallus gallus]
          Length = 498

 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 107 SSVSVQRLRER----LIISGDL--DPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
              +V+  R R    L   G L       LS        +A++ FQ    L PSG++D  
Sbjct: 19  RGAAVRGERRRAELFLQKYGYLGAPQPGRLSPV---EFTAALRDFQRVSHLRPSGVLDVP 75

Query: 161 TLEAMNVP 168
           TL  M  P
Sbjct: 76  TLRQMGRP 83


>gi|307320679|ref|ZP_07600092.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti AK83]
 gi|306893714|gb|EFN24487.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti AK83]
          Length = 1220

 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 28/72 (38%), Gaps = 3/72 (4%)

Query: 94   WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
            W   P +   +  +  +V+ ++  L  +G    +            +A+K FQ   G +P
Sbjct: 1147 WVGPPTKTATVDMT-RAVRNIQAILNNNGF--DAGKPDGQVGQKTTAAIKAFQKSVGQEP 1203

Query: 154  SGMVDSSTLEAM 165
            +G +    +  +
Sbjct: 1204 TGEITDGLVREL 1215


>gi|149051938|gb|EDM03755.1| rCG35535 [Rattus norvegicus]
          Length = 531

 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P+  +     +   ++ A+K+ Q   GL  +G +D  T+  M+ P
Sbjct: 6   LTRYGYLPPADPVHAQMQSLGKLQDAIKVMQRFAGLPETGQMDPITIATMHKP 58


>gi|169628804|ref|YP_001702453.1| hypothetical protein MAB_1714 [Mycobacterium abscessus ATCC 19977]
 gi|169240771|emb|CAM61799.1| Conserved hypothetical protein (cobalt transport protein?)
           [Mycobacterium abscessus]
          Length = 271

 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 1/94 (1%)

Query: 21  PMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEK 80
            + L+L   P+ +     +I          R      R    I   + +++    A   +
Sbjct: 164 TLALALRSFPMLSDEFRVLIAARRLRPPQVREGRRGRRGLRWIAEAVDMLTAAITAALRR 223

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRL 114
           A      I +RGG  ++   P   G +   +  L
Sbjct: 224 ASEMGDAITARGGTGQISAHPARPGLNDA-IALL 256


>gi|146340911|ref|YP_001205959.1| putative peptidase [Bradyrhizobium sp. ORS278]
 gi|146193717|emb|CAL77734.1| conserved hypothetical protein; putative peptidase (caspase-like)
           [Bradyrhizobium sp. ORS278]
          Length = 475

 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 23/71 (32%), Gaps = 3/71 (4%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRI 173
           ++ RL   G        S  FD    + +K +Q   G   SG +     +A+   +    
Sbjct: 365 VQRRLTGLGF---DTKTSGKFDEATRAVLKRWQAARGYPSSGYLTKLQHKALLAEIIPAA 421

Query: 174 RQLQVNLMRIK 184
                +    +
Sbjct: 422 STASASEEEPR 432


>gi|255320738|ref|ZP_05361914.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           radioresistens SK82]
 gi|262380641|ref|ZP_06073794.1| lytic murein transglycosylase B [Acinetobacter radioresistens
           SH164]
 gi|255302208|gb|EET81449.1| membrane-bound lytic murein transglycosylase B [Acinetobacter
           radioresistens SK82]
 gi|262297589|gb|EEY85505.1| lytic murein transglycosylase B [Acinetobacter radioresistens
           SH164]
          Length = 427

 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 33/92 (35%), Gaps = 12/92 (13%)

Query: 81  AIAFYQD-ILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           AIA   D +  +G     WP         G S    + +++ L+  G       +     
Sbjct: 338 AIAHLSDRLQGQGPFLTAWPTDDA-----GTSRAERREIQQFLLKKGY--DIGAVDGLIG 390

Query: 136 AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
                A++  Q R GL+P+G      L A+  
Sbjct: 391 DKTRQAIRQEQQRLGLNPTGRAGQQILRALRA 422


>gi|148258168|ref|YP_001242753.1| putative membrane-bound lytic murein transglycosylase signal
           peptide [Bradyrhizobium sp. BTAi1]
 gi|146410341|gb|ABQ38847.1| Putative membrane-bound lytic murein transglycosylase, putative
           signal peptide [Bradyrhizobium sp. BTAi1]
          Length = 464

 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L   G           F      A++ FQ   G    G   +  LE + 
Sbjct: 411 ELQQLLAERGFY--RGTPDGQFGGQTREALRNFQAAIGAPADGFATTDVLERLR 462


>gi|220922973|ref|YP_002498275.1| peptidoglycan-binding domain 1 protein [Methylobacterium nodulans
           ORS 2060]
 gi|219947580|gb|ACL57972.1| Peptidoglycan-binding domain 1 protein [Methylobacterium nodulans
           ORS 2060]
          Length = 278

 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 99  IRPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGM 156
             PL  G     +V+ L++ +I +G     KG    F      A++ F+ ++ L   SG+
Sbjct: 22  GPPLQWGEPDHAAVKILQQAIIAAGF-PIEKGADGNFGRLTAEAIRAFEAKYRLGPVSGV 80

Query: 157 VDSSTLEAMN 166
              + +  ++
Sbjct: 81  AGRAVIAMLD 90


>gi|302335955|ref|YP_003801162.1| ErfK/YbiS/YcfS/YnhG family protein [Olsenella uli DSM 7084]
 gi|301319795|gb|ADK68282.1| ErfK/YbiS/YcfS/YnhG family protein [Olsenella uli DSM 7084]
          Length = 464

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 17/73 (23%)

Query: 310 STKIEFYSRNNTYMHDTPEPILFNNVVRF--ETSGCVRVRNIIDLDVWLLKDTPTWSRYH 367
           +  + F   N+  +HD      F   +     + GCV +              P      
Sbjct: 405 NYWMPF-VGNSVGLHDATWRSRFGGTIYAWNGSHGCVNL--------------PYDDAER 449

Query: 368 IEEVVKTRKTTPV 380
           + E++    T  V
Sbjct: 450 LYELINVGDTVYV 462


>gi|282899816|ref|ZP_06307778.1| OpcA [Cylindrospermopsis raciborskii CS-505]
 gi|281195298|gb|EFA70233.1| OpcA [Cylindrospermopsis raciborskii CS-505]
          Length = 456

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
           L  +G    +  +      + +++++  Q +HGL  +G+  S T+ 
Sbjct: 65  LAATGFY--TGPIDGILGPHTKTSIREVQKKHGLSETGIPTSETIS 108


>gi|153010008|ref|YP_001371223.1| peptidoglycan-binding domain-containing protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151561896|gb|ABS15394.1| Peptidoglycan-binding domain 1 protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 328

 Score = 37.3 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 9/101 (8%)

Query: 69  IISKETIAQTEKAIAFYQDIL---SRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLD 125
           ++  ET+++ + A+A Y+  +        P +    +    SS  + R++  L   G  +
Sbjct: 228 VLKTETVSKPKPALASYEKPVPKKQVAATPAVQSVKV----SSQDIIRVQAGLKAFG--N 281

Query: 126 PSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            +  ++       + AV+ FQ    +  +G +D++ +  M 
Sbjct: 282 DTVPVNGQPGKTTQEAVREFQKLFSMPVTGEIDATLITKMR 322


>gi|229590705|ref|YP_002872824.1| hypothetical protein PFLU3251 [Pseudomonas fluorescens SBW25]
 gi|229362571|emb|CAY49478.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 201

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 2/62 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
             S  V R++  L++         +          A+  FQM  GL  +G +D+ +L A+
Sbjct: 139 QKSNLVIRVQTALMVRQYY--QGTIDGVMGKATRGALMAFQMDSGLTVNGRMDTPSLNAL 196

Query: 166 NV 167
            +
Sbjct: 197 GI 198


>gi|163735680|ref|ZP_02143111.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
 gi|161391108|gb|EDQ15446.1| ErfK/YbiS/YcfS/YnhG family protein [Roseobacter litoralis Och 149]
          Length = 208

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 301 DPGKINAMASTKIEF--YSRNNTY-MHDTPEPILFNNVVRFETSGCVRV 346
           D G  N + S  +     +R+    ++ +PEP       R  +SGCVR+
Sbjct: 134 DAGPTNPLGSRALYLYVGNRDTYRRIYGSPEPRSIG--GRA-SSGCVRM 179


>gi|114563484|ref|YP_750997.1| lytic murein transglycosylase [Shewanella frigidimarina NCIMB 400]
 gi|114334777|gb|ABI72159.1| lytic murein transglycosylase [Shewanella frigidimarina NCIMB 400]
          Length = 415

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
           V++L+++L  +G                   ++ FQ + GL   G  D  T  A+ +
Sbjct: 359 VKQLQQKLNDAGF--DVGKPDGILGRNSVLGLQAFQQQKGLIADGFPDVQTFNALGI 413


>gi|117924237|ref|YP_864854.1| sporulation domain-containing protein [Magnetococcus sp. MC-1]
 gi|117607993|gb|ABK43448.1| Sporulation domain protein [Magnetococcus sp. MC-1]
          Length = 740

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 47/165 (28%), Gaps = 13/165 (7%)

Query: 98  PIRPLHLGNSSVS---VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P R L              L+  L ++                  +A+K FQ  + L  S
Sbjct: 478 PERWLAPDQVGPRNEASAHLQRMLAMTPFYK--GLPDGMIGPESLNAIKAFQRAYDLPES 535

Query: 155 GMVDSST------LEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAV 208
           G  D+ T           + +  R++Q + ++ +   +         ++   P       
Sbjct: 536 GQPDAETQFMLAFYVRKQLQLSERLQQNKAHIPQASNVAVAAQLDPTMIELQPLRHQPVR 595

Query: 209 ENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQK 253
            N  +     +   +  +   ++      ++ N       +   +
Sbjct: 596 HN--LTRTLPLSPLQPSQPLAVVAPLDEGVIPNRTGGDNTAPAAQ 638


>gi|146276109|ref|YP_001166268.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554350|gb|ABP68963.1| lytic murein transglycosylase [Rhodobacter sphaeroides ATCC 17025]
          Length = 421

 Score = 37.3 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 13/82 (15%)

Query: 91  RGGWPELPIRPLHLGNSS---VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            GGWP         G+ +        L+  L  +G    + G          +A++ +Q 
Sbjct: 350 TGGWPR--------GDRALAAAERTELQRLLTAAGF--DTGGADGMIGPNTLAALRAWQA 399

Query: 148 RHGLDPSGMVDSSTLEAMNVPV 169
             GL   G  + + L  +    
Sbjct: 400 ARGLVADGYANEAILNRLREGA 421


>gi|320162414|ref|YP_004175639.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1]
 gi|319996268|dbj|BAJ65039.1| hypothetical protein ANT_30130 [Anaerolinea thermophila UNI-1]
          Length = 358

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 23/152 (15%)

Query: 245 VIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE--KGKEVFVEEVDWNSPEPPNFIFRQDP 302
            +P    + ++    +    Y  D  + +      GK +     D+++P+      R+ P
Sbjct: 214 TVPPEAKRIEVWLKDQLVIAYENDEPVLITRAATGGKFID---GDYSTPQGRYLTNRKRP 270

Query: 303 GKINAMAST------------KIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
            +  A                 + + + +    H T     F       + GC+ +    
Sbjct: 271 SRHMASGDLAAPNSYDLPGVPWVCYLTESGISFHGTYWHNDFGKPR---SHGCINLSPAA 327

Query: 351 DLDVWLLKDT-PTWSRYHIEEVVKTRKTTPVK 381
               W+ + T P      +     T  +  V+
Sbjct: 328 --ARWIYRWTHPAVPFDQVTWWEDTGTSVVVR 357


>gi|239994683|ref|ZP_04715207.1| membrane-bound lytic transglycolase-related protein [Alteromonas
           macleodii ATCC 27126]
          Length = 428

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 8/81 (9%)

Query: 95  PELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS 154
           P+LP            +  L+ +L   G                   ++ +Q+ + +   
Sbjct: 356 PDLPAYNRK------DIIALQSKLNDLGF--DVGKPDGIIGPATREGIRNYQISNNMIAD 407

Query: 155 GMVDSSTLEAMNVPVDLRIRQ 175
           G      + A+N+ +  +   
Sbjct: 408 GFPGLEVMAALNIDLASKANS 428


>gi|116251151|ref|YP_766989.1| peptidoglycan binding transmembrane protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115255799|emb|CAK06880.1| putative peptidoglycan binding transmembrane protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 317

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 13/152 (8%)

Query: 25  SLVEKPIHASVLDEIINESY-----HSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTE 79
           S+    I  +V+   +  +          +  F     +    + +  P   ++    T 
Sbjct: 59  SIAGGAITFAVIFSFVAANALWYQPGLHPHPIFRTRDPQSPTVLGARRPAEEQQG-DVTT 117

Query: 80  KAIAFYQDILSRGGWPELPIRPLHLGNS-SVSVQRLRERLIISGDLDPSKGLSVAFDAYV 138
             I   QD  +    P         G   S  V  ++++L+  G    +           
Sbjct: 118 FRIERPQDTATTNATPAPAA----PGQQPSQLVMDIQQQLVRRGLY--NGIPDGIIGPRT 171

Query: 139 ESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
            +A+  F+   G+  +G      L A+     
Sbjct: 172 SAAILFFEETVGMTQTGDPTPDVLVALKTDAA 203



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 111 VQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           V ++++ L        + G+         +A++ FQ  + L   G  + + L+ + 
Sbjct: 259 VLKIQKGLSNMAY--ANVGVDGVAGEQTRAAIRHFQKHYNLPEDGEPNQAVLKKLK 312


>gi|4191265|emb|CAA09055.1| MT5-MMP protein [Mus musculus]
          Length = 614

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 54  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 106


>gi|238014842|gb|ACR38456.1| unknown [Zea mays]
          Length = 243

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 100 RPLHLGNSSVSVQRLRERLIISGDLDPSKGLS-VAFDAYVESAVKLFQ 146
           R L  G     V+ ++E L   G     + +   +F +  E AVK +Q
Sbjct: 176 RTLRTGAEGEDVRAMQEALQKLGFYSGEEDMEYSSFSSGTERAVKTWQ 223


>gi|115668714|ref|XP_786545.2| PREDICTED: similar to matrix metalloproteinase 14
           [Strongylocentrotus purpuratus]
 gi|115931871|ref|XP_001182435.1| PREDICTED: similar to matrix metalloproteinase 14
           [Strongylocentrotus purpuratus]
          Length = 526

 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 21/125 (16%)

Query: 119 IISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---------- 168
             S DL      S      +  A++LFQ  +GL+ +G++ +   + M +P          
Sbjct: 35  FESNDLSTGHLRSQ---DSLNDAIRLFQRMNGLNETGILTAEVQDLMQMPRCGLPDNTGT 91

Query: 169 -VDLRIRQLQVNLMRI-----KKLLEQKMGL--RYVLVNIPAASLEAVENGKVGLRSTVI 220
               R R+  ++ ++         LE       R  +  I A +L+   +        V 
Sbjct: 92  QAINRARRYALSDVKWFKTDLTWRLENTTPDLRRSSVREIIARALKHWSDASQLTFREVQ 151

Query: 221 VGRVD 225
            G  D
Sbjct: 152 SGDAD 156


>gi|163733324|ref|ZP_02140767.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
 gi|161393112|gb|EDQ17438.1| peptidoglycan binding domain protein, putative [Roseobacter
           litoralis Och 149]
          Length = 590

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 54/160 (33%), Gaps = 38/160 (23%)

Query: 23  GLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAI 82
            +  + + I   ++  ++     + ++         VD  +D++ P  ++ + +Q   A 
Sbjct: 118 AIGSLSERITPQIVPPVLAGEQTAQLD--------SVDGPVDTETPAQARRSESQLTAAQ 169

Query: 83  AFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAV 142
                                          L+  L  +G    +  +  AF     +A+
Sbjct: 170 RR----------------------------ELQTALQWAGVY--NAAIDGAFGRGTRNAM 199

Query: 143 KLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMR 182
             +Q  +GL+ +G++ +     +       +  L + ++R
Sbjct: 200 ATWQRNNGLEATGVLTTQQRARLIAAYTAILDGLDMRMVR 239


>gi|119386487|ref|YP_917542.1| peptidoglycan binding domain-containing protein [Paracoccus
           denitrificans PD1222]
 gi|119377082|gb|ABL71846.1| Peptidoglycan-binding domain 1 protein [Paracoccus denitrificans
           PD1222]
          Length = 264

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 142 VKLFQMRHGLDPSGMVDSSTLEAM 165
           V+ FQ   GL   G+    TL A+
Sbjct: 196 VRRFQKEAGLTADGIAGPKTLAAL 219


>gi|56698438|ref|YP_168812.1| peptidoglycan-binding protein, putative [Ruegeria pomeroyi DSS-3]
 gi|56680175|gb|AAV96841.1| peptidoglycan-binding protein, putative [Ruegeria pomeroyi DSS-3]
          Length = 385

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 2/83 (2%)

Query: 84  FYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVK 143
              D L  GG       P   G +    + L+ RL  +G    + G      +   +A+ 
Sbjct: 303 HLSDRLKGGGPFRASFGPDETGLTLEERKELQSRLTAAGY--DTGGADGVIGSKSTAAIS 360

Query: 144 LFQMRHGLDPSGMVDSSTLEAMN 166
            +Q   GL  +G      L  + 
Sbjct: 361 DYQRARGLAVTGTPSVELLRQLR 383


>gi|39933976|ref|NP_946252.1| lytic murein transglycosylase [Rhodopseudomonas palustris CGA009]
 gi|39647823|emb|CAE26343.1| putative transglycolase [Rhodopseudomonas palustris CGA009]
          Length = 465

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L   G           F +   SA++ FQ   G    G      LE + 
Sbjct: 412 ELQQLLAQRGFY--RGTPDGQFGSETRSALRNFQASIGAPADGFATGEMLERLR 463


>gi|327283195|ref|XP_003226327.1| PREDICTED: matrix metalloproteinase-17-like [Anolis carolinensis]
          Length = 562

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQ 175
           L   G L P    +        +  A+   Q   GL+ +G++D +TL+ M  P       
Sbjct: 22  LTRFGYLLPPDPNTGQLQTQEELAKAIMTMQQFGGLEATGILDEATLKLMKTPRCSLPDL 81

Query: 176 LQVNLMRIK 184
           LQ     ++
Sbjct: 82  LQSEARTLR 90


>gi|192289396|ref|YP_001990001.1| lytic murein transglycosylase [Rhodopseudomonas palustris TIE-1]
 gi|192283145|gb|ACE99525.1| lytic murein transglycosylase [Rhodopseudomonas palustris TIE-1]
          Length = 461

 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L   G           F +   SA++ FQ   G    G      LE + 
Sbjct: 408 ELQQLLAQRGFY--RGTPDGQFGSETRSALRNFQASIGAPADGFATGEMLERLR 459


>gi|221122763|ref|XP_002164594.1| PREDICTED: similar to LOC100127631 protein [Hydra magnipapillata]
          Length = 359

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 7/53 (13%)

Query: 118 LIISGDLDPSKGLSVAFDA--YVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           LI  G  +P       FDA   +  A+K +Q  + L  +G +D  T E MN P
Sbjct: 30  LINLGYYNPFA-----FDASNNLTEAIKDYQSFYNLPKTGELDQLTTEIMNKP 77


>gi|332668953|ref|YP_004451961.1| peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
 gi|332337991|gb|AEE44574.1| Peptidoglycan-binding domain 1 protein [Cellulomonas fimi ATCC 484]
          Length = 365

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPS--GMVD 158
            L  G +   V++++  +  +G L  + G+   F+A     V+ +Q R  +     G V 
Sbjct: 81  TLARGATGDPVRKVQHAVHDAGVLFRTFGVDGIFEAETARRVRQYQQRESVGGDTAGAVG 140

Query: 159 SSTLEAMNV 167
           + T+ +++ 
Sbjct: 141 AHTIRSLDA 149


>gi|194334076|ref|YP_002015936.1| ErfK/YbiS/YcfS/YnhG family protein [Prosthecochloris aestuarii DSM
           271]
 gi|194311894|gb|ACF46289.1| ErfK/YbiS/YcfS/YnhG family protein [Prosthecochloris aestuarii DSM
           271]
          Length = 235

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 34/128 (26%), Gaps = 28/128 (21%)

Query: 254 DMMALLRQDPQYLKDNNIHMI---DEKGKEVFVEEVDWNSPEPPNFIFRQDPGK------ 304
           + + + +Q   Y  +  I +       G         W             PGK      
Sbjct: 112 EYVPIPKQISDYRGEREIRVFLALQYFGAYENGAIAFWGPVSSGKKSRPTRPGKFVVNYK 171

Query: 305 ---------INAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVR--VRNIIDLD 353
                     NA     I +      ++H+   P          + GC+R  + +   L 
Sbjct: 172 QRYKRSIKYHNAPMPYAINYNG--GYFIHEQSLPGY------PASHGCIRLLMSDAKKLF 223

Query: 354 VWLLKDTP 361
            W+    P
Sbjct: 224 YWIKIGDP 231


>gi|114662852|ref|XP_523380.2| PREDICTED: matrix metalloproteinase 15 isoform 2 [Pan troglodytes]
          Length = 671

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L + G L           +   + SA+   Q  +G+  +G++D  T E M  P
Sbjct: 57  LRLYGYLPQPSRHMSTMRSAQILASALAEMQRFYGIPVTGVLDEETKEWMKRP 109


>gi|89052862|ref|YP_508313.1| lytic murein transglycosylase [Jannaschia sp. CCS1]
 gi|88862411|gb|ABD53288.1| Lytic murein transglycosylase [Jannaschia sp. CCS1]
          Length = 390

 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 93  GWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           G P    R    G     ++RL+  L   G       +     A   +AV+  Q R GL 
Sbjct: 320 GAPVFDARNPEPGLGGDQMRRLQTALQARGY--DVGRIDGILGAGTRAAVREEQRRLGLP 377

Query: 153 PSGMVDSSTLEAM 165
                 S+ L A+
Sbjct: 378 ADAWPTSALLNAL 390


>gi|83313131|ref|YP_423395.1| hypothetical protein amb4032 [Magnetospirillum magneticum AMB-1]
 gi|82947972|dbj|BAE52836.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 185

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 15/98 (15%)

Query: 104 LGNSSV----SVQRLRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMV 157
           +G+S       V  ++  +   G  DP    GL+   D  +   +K FQ  H L+  G++
Sbjct: 9   IGSSYPADPGDVLNVKTSMNNLGYYDPPAAYGLTPWPDTPMFDGIKNFQKDHDLEVDGIM 68

Query: 158 DS---------STLEAMNVPVDLRIRQLQVNLMRIKKL 186
                        L            QL  N      L
Sbjct: 69  HPDGPTVTTMNKGLAQGEDSPSDGNEQLAYNPAAANLL 106


>gi|47225198|emb|CAF98825.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 732

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDL 171
           L+  L   G L           +   ++SA+   Q R+GL+ +G +DS+T+E        
Sbjct: 1   LQAWLQRYGYLPSVDPRMSVLRSARVMQSAIAAMQRRYGLNVTGTLDSNTVERWAPGAAA 60


>gi|189069202|dbj|BAG35540.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L+  G L P      +      + +A+   Q  +GL  +G  D+ T++AM  P     D 
Sbjct: 39  LLQYGYLPPGDLRTHTQRSPQSLSAAIAAMQKFYGLQVTGKADADTMKAMRRPRCGVPDK 98

Query: 172 RIRQLQVNLMRIK 184
              +++ N+ R +
Sbjct: 99  FGAEIKANVRRKR 111


>gi|148674197|gb|EDL06144.1| matrix metallopeptidase 24 [Mus musculus]
          Length = 570

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 10  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 62


>gi|115496089|ref|NP_001069451.1| matrix metalloproteinase-19 [Bos taurus]
 gi|115305300|gb|AAI23723.1| Matrix metallopeptidase 19 [Bos taurus]
 gi|296487677|gb|DAA29790.1| matrix metalloproteinase 19 [Bos taurus]
          Length = 499

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L         F    V  A++ FQ    L  SG +D +T   M  P
Sbjct: 33  LLQYGYLQKPLEGPDNFRPEDVIEALRAFQEASELPVSGQLDDATSARMRQP 84


>gi|332560179|ref|ZP_08414501.1| hypothetical protein RSWS8N_14000 [Rhodobacter sphaeroides WS8N]
 gi|332277891|gb|EGJ23206.1| hypothetical protein RSWS8N_14000 [Rhodobacter sphaeroides WS8N]
          Length = 254

 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
            +      G  N + +  +  Y         +H T +     +     ++GC+R+  ++ 
Sbjct: 138 PYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQNASIGH---ATSAGCIRLFNQDA 194

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           IDL   +   TP   R   E +    +
Sbjct: 195 IDLYGRVNLGTPVKVRTEAESLALEGQ 221


>gi|327271606|ref|XP_003220578.1| PREDICTED: matrix metalloproteinase-24-like [Anolis carolinensis]
          Length = 604

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 118 LIISGDL-DPSKGLSVAF-DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L      +S       ++SAV   Q  +G+  +G++D +T+  M  P
Sbjct: 44  LKTYGYLLSSDTRMSALHSGKVMQSAVTTMQRFYGIPVTGVLDQTTIAWMKKP 96


>gi|291084888|ref|YP_003495171.1| gp30 LysB [Mycobacterium phage Ardmore]
 gi|262262724|gb|ACY39912.1| gp30 LysB [Mycobacterium phage Ardmore]
          Length = 332

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------GLDP 153
           L  G+ S  +++++  +        +   +  +D  + + V   Q R+        GL  
Sbjct: 10  LGPGDRSDEIRKIKAFMRRKFSYAATLADTEFYDEAMTAVVAEMQSRYNTAGHLRDGLYI 69

Query: 154 SGMVDSST 161
            G++++ T
Sbjct: 70  PGIINAET 77


>gi|118589003|ref|ZP_01546410.1| hypothetical protein SIAM614_13163 [Stappia aggregata IAM 12614]
 gi|118438332|gb|EAV44966.1| hypothetical protein SIAM614_13163 [Stappia aggregata IAM 12614]
          Length = 241

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 2/55 (3%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+ RL   G       +          A++ FQ   GL  +   D +T+ A+   
Sbjct: 10  LQSRLTAHGF--ACGEIDGRIGPKTLHALRSFQKAMGLAVTSEADEATVLALRQS 62


>gi|6678900|ref|NP_032635.1| matrix metalloproteinase-15 precursor [Mus musculus]
 gi|12585269|sp|O54732|MMP15_MOUSE RecName: Full=Matrix metalloproteinase-15; Short=MMP-15; AltName:
           Full=Membrane-type matrix metalloproteinase 2;
           Short=MT-MMP 2; Short=MTMMP2; AltName:
           Full=Membrane-type-2 matrix metalloproteinase;
           Short=MT2-MMP; Short=MT2MMP; Flags: Precursor
 gi|2662366|dbj|BAA23667.1| membrane type-2 matrix metalloproteinase [Mus musculus]
 gi|34784408|gb|AAH57952.1| Matrix metallopeptidase 15 [Mus musculus]
 gi|55777344|gb|AAH47278.1| Matrix metallopeptidase 15 [Mus musculus]
          Length = 657

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP----VDL 171
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P     D 
Sbjct: 53  LRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKRPRCGVPDQ 112

Query: 172 RIRQLQVNLMRIK 184
               ++ NL R +
Sbjct: 113 FGVHVKANLRRRR 125


>gi|115495469|ref|NP_034938.3| matrix metalloproteinase-24 [Mus musculus]
 gi|123236166|emb|CAM22837.1| matrix metallopeptidase 24 [Mus musculus]
 gi|162317834|gb|AAI56392.1| Matrix metallopeptidase 24 [synthetic construct]
          Length = 618

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|13929064|ref|NP_113945.1| matrix metalloproteinase-24 [Rattus norvegicus]
 gi|20138812|sp|Q99PW6|MMP24_RAT RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|12862768|dbj|BAB32589.1| membrane-type matrix metalloproteinase 5 [Rattus norvegicus]
          Length = 618

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|83855364|ref|ZP_00948894.1| peptidoglycan binding domain protein [Sulfitobacter sp. NAS-14.1]
 gi|83843207|gb|EAP82374.1| peptidoglycan binding domain protein [Sulfitobacter sp. NAS-14.1]
          Length = 426

 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 94  WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDP 153
           WP +  R L    +      L+ +L   G    +  +         +AV+ FQ+  GL P
Sbjct: 356 WP-VQDRAL----TYDERIELQTQLTAQGF--DTVQIDAKIGPLTINAVREFQLSQGLVP 408

Query: 154 SGMVDSSTLEAMNVPVDL 171
            G      LE +      
Sbjct: 409 DGYASPRLLETLRAAAAE 426


>gi|318065823|ref|YP_004123854.1| gp32 [Mycobacterium phage Wee]
 gi|12060969|gb|AAG48319.1|AF319619_3 gp3 [Mycobacterium phage Ms6]
 gi|315420906|gb|ADU15907.1| gp32 [Mycobacterium phage Wee]
          Length = 332

 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 28/68 (41%), Gaps = 8/68 (11%)

Query: 102 LHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH--------GLDP 153
           L  G+ S  +++++  +        +   +  +D  + + V   Q R+        GL  
Sbjct: 10  LGPGDRSDEIRKIKAFMRRKFSYAATLADTEFYDEAMTAVVAEMQSRYNTAGQLRDGLYI 69

Query: 154 SGMVDSST 161
            G++++ T
Sbjct: 70  PGIINAET 77


>gi|332240134|ref|XP_003269245.1| PREDICTED: matrix metalloproteinase-25 [Nomascus leucogenys]
          Length = 567

 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G +D  T+  M  P
Sbjct: 41  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKP 93


>gi|11968059|ref|NP_071913.1| matrix metalloproteinase-25 preproprotein [Homo sapiens]
 gi|12585274|sp|Q9NPA2|MMP25_HUMAN RecName: Full=Matrix metalloproteinase-25; Short=MMP-25; AltName:
           Full=Leukolysin; AltName: Full=Membrane-type matrix
           metalloproteinase 6; Short=MT-MMP 6; Short=MTMMP6;
           AltName: Full=Membrane-type-6 matrix metalloproteinase;
           Short=MT6-MMP; Short=MT6MMP; Flags: Precursor
 gi|8052552|gb|AAF66697.2|AF145442_1 leukolysin [Homo sapiens]
 gi|10441358|gb|AAG17007.1|AF185270_1 leukolysin [Homo sapiens]
 gi|8546817|emb|CAB94713.1| matrix metalloproteinase-25 [Homo sapiens]
 gi|9798454|emb|CAC03490.1| membrane type matrix metalloproteinase number 6 [Homo sapiens]
 gi|119605819|gb|EAW85413.1| hCG15613, isoform CRA_a [Homo sapiens]
 gi|119605821|gb|EAW85415.1| hCG15613, isoform CRA_a [Homo sapiens]
 gi|189442380|gb|AAI67800.1| Matrix metallopeptidase 25 [synthetic construct]
          Length = 562

 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G +D  T+  M  P
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKP 88


>gi|326936325|ref|XP_003214206.1| PREDICTED: LOW QUALITY PROTEIN: matrix metalloproteinase-9-like
           [Meleagris gallopavo]
          Length = 689

 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G +  ++    +    +  A++  Q + GL+ +G +D+STLEAM  P
Sbjct: 49  LLRFGYIQEAEARRSSKHVSLAKALRKMQKQLGLEETGELDASTLEAMRXP 99


>gi|281414246|ref|ZP_06245988.1| DNA segregation ATPase, FtsK/SpoIIIE family protein [Micrococcus
           luteus NCTC 2665]
          Length = 774

 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 5/74 (6%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-- 99
                      D           S  P+++ +     E  +A  +++ + GG   +    
Sbjct: 614 AMRSGRPVAVLDG-TGEAATAARSGTPVLTPDAEGAGEAVLARLRELAAAGGTAVITGWN 672

Query: 100 --RPLHLGNSSVSV 111
               L +G++  +V
Sbjct: 673 AWSGLRVGDTYRTV 686


>gi|47212180|emb|CAF95128.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 351

 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   ++        +  A++  Q   GL  +G+ D  TL  M  P
Sbjct: 3   LSRFGYLPPPDPVTGQLQTQEALTQAIRAMQRFGGLKETGIFDQDTLLLMGTP 55


>gi|296219419|ref|XP_002755837.1| PREDICTED: matrix metalloproteinase-25 [Callithrix jacchus]
          Length = 685

 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G++D  T+  M  P
Sbjct: 43  LTRYGYLPPPDPAQAQLQSPEKLSDAIKVMQRFAGLPETGLMDPRTVATMRKP 95


>gi|12643347|sp|Q9R0S2|MMP24_MOUSE RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Matrix metalloproteinase-21; Short=MMP-21; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|5689227|dbj|BAA82966.1| membrane-type-5 matrix metalloproteinase [Mus musculus]
          Length = 618

 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAF--DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P +  + A      ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 58  LKSYGYLLPYESRASALHSGKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 110


>gi|85713853|ref|ZP_01044842.1| hypothetical protein NB311A_06853 [Nitrobacter sp. Nb-311A]
 gi|85698979|gb|EAQ36847.1| hypothetical protein NB311A_06853 [Nitrobacter sp. Nb-311A]
          Length = 506

 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 8/42 (19%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDT 360
           N   +H  P P          + GCVR+         L   T
Sbjct: 115 NGLALHGGPLPG------HAASHGCVRM--PYGFAEKLFDKT 148


>gi|260818326|ref|XP_002604334.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
 gi|229289660|gb|EEN60345.1| hypothetical protein BRAFLDRAFT_88624 [Branchiostoma floridae]
          Length = 423

 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 14/100 (14%)

Query: 138 VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP---VDLRIRQLQVN---------LMRIKK 185
           V  AV+  Q  +GL  +G+++ +TL A+  P   V   + +  ++           R++ 
Sbjct: 2   VAEAVRSVQKSYGLLATGILNPATLAAIRKPRCGVPDVLARYALSGTKWAKNDLTYRLES 61

Query: 186 LLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVD 225
           L               A       +      + V  GR D
Sbjct: 62  LTSHLTETEAREAIRDAF--RVWSDYTPLTFTAVPSGRAD 99


>gi|192823824|ref|YP_001994742.1| gp11 [Mycobacterium phage DD5]
 gi|190610602|gb|ACE80120.1| gp11 [Mycobacterium phage DD5]
          Length = 322

 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    SG      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFSGYARVHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDTRPVLLTVSGTGVPWWIGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|291389397|ref|XP_002711214.1| PREDICTED: matrix metalloproteinase 19 [Oryctolagus cuniculus]
          Length = 525

 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L         F    +  A++ FQ    L  SG +D +    M  P
Sbjct: 32  LLQYGYLQKPLEGPQVFRPEDIAEALRAFQEASELPVSGQLDDAVRARMRQP 83


>gi|221638152|ref|YP_002524414.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides KD131]
 gi|221158933|gb|ACL99912.1| ErfK/YbiS/YcfS/YnhG family protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 254

 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
            +      G  N + +  +  Y         +H T +     +     ++GC+R+  ++ 
Sbjct: 138 PYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQNASIGH---ATSAGCIRLFNQDA 194

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           IDL   +   TP   R   E +    +
Sbjct: 195 IDLYGRVNLGTPVKVRTEAESLALEGQ 221


>gi|194212236|ref|XP_001491808.2| PREDICTED: similar to Matrix metalloproteinase-19 precursor
           (MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Equus
           caballus]
          Length = 547

 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L         F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 33  LLKYGYLQKPLEGPDDFSPEDIMEALRAFQEASELPVSGQLDDATRVRMRQP 84


>gi|75908669|ref|YP_322965.1| ErfK/YbiS/YcfS/YnhG protein [Anabaena variabilis ATCC 29413]
 gi|75702394|gb|ABA22070.1| peptidoglycan transpeptidase precursor, ErfK-YbiS-YhnG family
           [Anabaena variabilis ATCC 29413]
          Length = 171

 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 29/130 (22%), Gaps = 18/130 (13%)

Query: 236 NRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDE----KGKEVFVEEVDWNSP 291
             ++       PR I           D +        ++       GK      V     
Sbjct: 45  TAVVEQNSITQPRRIEID------LSDQRLFAWEGKKLVYSFRISTGKRSTPTPVGQFKI 98

Query: 292 EPPNFIFRQD-PGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRNII 350
                  R   PG         + F+       H       F       + GCV +   +
Sbjct: 99  NSKYRTNRMRGPGYDIPNVPYAMYFHQGYAI--HGAYWHNRFGTP---VSHGCVNL--PV 151

Query: 351 DLDVWLLKDT 360
            L   L   T
Sbjct: 152 KLARKLYNWT 161


>gi|158286645|ref|XP_001688107.1| AGAP006904-PA [Anopheles gambiae str. PEST]
 gi|158286647|ref|XP_001688108.1| AGAP006904-PB [Anopheles gambiae str. PEST]
 gi|158286649|ref|XP_308849.3| AGAP006904-PC [Anopheles gambiae str. PEST]
 gi|157020567|gb|EDO64756.1| AGAP006904-PA [Anopheles gambiae str. PEST]
 gi|157020568|gb|EDO64757.1| AGAP006904-PB [Anopheles gambiae str. PEST]
 gi|157020569|gb|EAA04040.3| AGAP006904-PC [Anopheles gambiae str. PEST]
          Length = 570

 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 4/55 (7%)

Query: 118 LIISGDLDP---SKGLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P   +       D    E A+  FQ   GL+ +G +D  T++ M++P
Sbjct: 38  LSQFGYLSPKYRNPTSGNLLDQDTWEKAIMEFQSFAGLNVTGELDGETMQLMSLP 92


>gi|254515069|ref|ZP_05127130.1| lytic murein transglycosylase [gamma proteobacterium NOR5-3]
 gi|219677312|gb|EED33677.1| lytic murein transglycosylase [gamma proteobacterium NOR5-3]
          Length = 402

 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 110 SVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPV 169
            V   +  L   G       +     +   +A++ FQ+   L   G  D  TLE +N   
Sbjct: 343 DVASAQRALNALGH--DVGTVDGVLGSRTHAALRAFQLEQRLPADGYPDPLTLETLNAAA 400


>gi|51892719|ref|YP_075410.1| hypothetical protein STH1581 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856408|dbj|BAD40566.1| conserved domain protein [Symbiobacterium thermophilum IAM 14863]
          Length = 354

 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 45/195 (23%), Gaps = 73/195 (37%)

Query: 187 LEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGR--------VDR-----QTPILHS 233
                    ++V+     L   E+G++   + V  GR         D       TP    
Sbjct: 203 PVAPPEPTVIVVDKGLNVLWYYEDGELVQTARVSTGRHVAGPAPSPDNWTENLLTPTGRF 262

Query: 234 RINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEP 293
            +  ++    +                          I  +D                  
Sbjct: 263 TVTLMVPGMPYY----------------------KEGIDALD------------------ 282

Query: 294 PNFIFRQDPGKINAMASTKIEFYSRNNTY-----MHDTPEPILFNNVVRFETSGCVRVRN 348
                       N + +  I F            +H T  P       R+ + G + + N
Sbjct: 283 ----------PANPLGTRWIGFTVFEGDGGSLWAIHGTNAPEALG---RWNSEGSIVMSN 329

Query: 349 --IIDLDVWLLKDTP 361
             +  L   +   TP
Sbjct: 330 GEVEQLYERVELGTP 344


>gi|239917277|ref|YP_002956835.1| DNA segregation ATPase, FtsK/SpoIIIE family [Micrococcus luteus
           NCTC 2665]
 gi|239838484|gb|ACS30281.1| DNA segregation ATPase, FtsK/SpoIIIE family [Micrococcus luteus
           NCTC 2665]
          Length = 999

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 5/74 (6%)

Query: 42  ESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQTEKAIAFYQDILSRGGWPELPI-- 99
                      D           S  P+++ +     E  +A  +++ + GG   +    
Sbjct: 839 AMRSGRPVAVLDG-TGEAATAARSGTPVLTPDAEGAGEAVLARLRELAAAGGTAVITGWN 897

Query: 100 --RPLHLGNSSVSV 111
               L +G++  +V
Sbjct: 898 AWSGLRVGDTYRTV 911


>gi|75676549|ref|YP_318970.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
 gi|74421419|gb|ABA05618.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 270

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 20/94 (21%)

Query: 316 YSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKDTP----- 361
              ++ +       +H T             + GCVR+   N   L   + ++       
Sbjct: 81  PMPHSIFFTKAGHAIHGTLSEGSLGVP---VSHGCVRISRANASTLFSLVKQEGVLNTTV 137

Query: 362 ---TWSRYHIEEVVKTRKTTPVKLATEVPVHFVY 392
                SR  +    + ++ T V      P +  Y
Sbjct: 138 TLTGSSRVALARNPRGKRKTDVAGRDPGPAYQSY 171


>gi|77462298|ref|YP_351802.1| hypothetical protein RSP_1754 [Rhodobacter sphaeroides 2.4.1]
 gi|77386716|gb|ABA77901.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
          Length = 269

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
            +      G  N + +  +  Y         +H T +     +     ++GC+R+  ++ 
Sbjct: 153 PYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQNASIGH---ATSAGCIRLFNQDA 209

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           IDL   +   TP   R   E +    +
Sbjct: 210 IDLYGRVNLGTPVKVRTEAESLALEGQ 236


>gi|126461174|ref|YP_001042288.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126102838|gb|ABN75516.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 269

 Score = 36.9 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
            +      G  N + +  +  Y         +H T +     +     ++GC+R+  ++ 
Sbjct: 153 PYAAGLPGGLQNPLGARALYLYRGGRDTMFRIHGTVQNASIGH---ATSAGCIRLFNQDA 209

Query: 350 IDLDVWLLKDTPTWSRYHIEEVVKTRK 376
           IDL   +   TP   R   E +    +
Sbjct: 210 IDLYGRVNLGTPVKVRTEAESLALEGQ 236


>gi|192823912|ref|YP_001994558.1| gp11 [Mycobacterium phage Jasper]
 gi|190610507|gb|ACE80026.1| gp11 [Mycobacterium phage Jasper]
          Length = 322

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    +G      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFAGYARIHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDARPVLLTVSGTGVPWWVGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|86749139|ref|YP_485635.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
 gi|86572167|gb|ABD06724.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris HaA2]
          Length = 253

 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 16/53 (30%), Gaps = 12/53 (22%)

Query: 316 YSRNNTY-------MHDTPEPILFNNVVRFETSGCVRV--RNIIDLDVWLLKD 359
              +  +       +H T             + GCVR+   N   L   + KD
Sbjct: 81  PMPHAIFFTKRGHAIHGTDAAGKLGVP---VSHGCVRLSRENASKLYALVEKD 130


>gi|328543593|ref|YP_004303702.1| Caspase domain protein [polymorphum gilvum SL003B-26A1]
 gi|326413337|gb|ADZ70400.1| Caspase domain protein [Polymorphum gilvum SL003B-26A1]
          Length = 511

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 112 QRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
             ++ RL ++G          AF     S ++ +Q  +GL  +G
Sbjct: 379 VEVQARLNLAGY--NVGRPDGAFGQNTRSGIRAWQTANGLPATG 420


>gi|119512845|ref|ZP_01631912.1| Phosphoesterase, RecJ-like [Nodularia spumigena CCY9414]
 gi|119462518|gb|EAW43488.1| Phosphoesterase, RecJ-like [Nodularia spumigena CCY9414]
          Length = 414

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/94 (12%), Positives = 26/94 (27%), Gaps = 8/94 (8%)

Query: 18  LILPMGLSLVEKPIHASVLDEIINESYHSIVNDRFDNFLARVDMGIDSDIPIISKETIAQ 77
            ++ +G+ +    +              ++             +      P +S +    
Sbjct: 141 TVMALGIHVDTGSLTFDS-----ATPRDALALAWLMAQGVSSSVISTYLDPGLSPQLQQL 195

Query: 78  TEKAIAFYQDILSRG---GWPELPIRPLHLGNSS 108
             +A+   +    RG   GW  L       G SS
Sbjct: 196 LTEALENLEYFSLRGYTIGWVTLRTEEFVPGLSS 229


>gi|157786485|ref|YP_001491661.1| gp9 [Mycobacterium phage Bethlehem]
 gi|40769424|gb|AAR89730.1| gp9 [Mycobacterium phage Bethlehem]
          Length = 322

 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    +G      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFAGYARIHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDKRPVLLTVSGTGVPWWIGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|239623512|ref|ZP_04666543.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521543|gb|EEQ61409.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 549

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 14/57 (24%), Gaps = 4/57 (7%)

Query: 309 ASTKIEFYSRNNTYMHDTPEPILFN--NVVRFETSGCVRV--RNIIDLDVWLLKDTP 361
           +  K           HD      F         + GCV +      +L   +    P
Sbjct: 363 SPVKFWMPFNGGIGFHDASWRSSFGGSIYKTGGSHGCVNMPYAAAKELFENVYAGMP 419


>gi|52549472|gb|AAU83321.1| hypothetical protein GZ27E6_43 [uncultured archaeon GZfos27E6]
          Length = 585

 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              SV  +R    + G     +  S  F   +   + ++Q++ GL+  G +   TL+ + 
Sbjct: 267 QGYSVDFVRRIESLFGFSHSKESESGKFSKDLVRVLAIYQLKEGLEADGELGDETLKKLR 326


>gi|256078917|ref|XP_002575739.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
 gi|238660985|emb|CAZ31973.1| matrix metallopeptidase-7 (M10 family) [Schistosoma mansoni]
          Length = 454

 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 39/106 (36%)

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNI 200
           A++ FQ+++ L  +G +D +T   +  P      Q   +      L + + G        
Sbjct: 80  AIRKFQIQYNLPITGKLDKATKNLLISPRCGNPDQPIKSKQSSTLLSKLRFGNTTHFNQN 139

Query: 201 PAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVI 246
            + +++   N     ++   + +  ++  I   ++        W I
Sbjct: 140 YSFTVQNANNNHNNNQNERRLLKRQKRYLIGDEKMKWTKKQLTWQI 185


>gi|301629918|ref|XP_002944079.1| PREDICTED: matrix metalloproteinase-21-like, partial [Xenopus
           (Silurana) tropicalis]
          Length = 568

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%)

Query: 123 DLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           D      L +  +     A++ FQ  + L+ +G +D++T+ AMNVP
Sbjct: 47  DSVSPTDLELTLNPRFNGALRRFQEANKLEVTGRLDAATIMAMNVP 92


>gi|126272561|ref|XP_001367626.1| PREDICTED: similar to putative matrix metalloproteinase
           [Monodelphis domestica]
          Length = 574

 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  +  A+  FQ  + L  +G +D +TL AMN P
Sbjct: 90  NPGLREAIAKFQSFNRLPVTGQLDKATLAAMNQP 123


>gi|52550439|gb|AAU84288.1| hypothetical protein GZ9D1_1 [uncultured archaeon GZfos9D1]
          Length = 344

 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 25/60 (41%)

Query: 107 SSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
              SV  +R    + G     +  S  F   +   + ++Q++ GL+  G +   TL+ + 
Sbjct: 267 QGYSVDFVRRIESLFGFSHSKESESGKFSKDLVRVLAIYQLKEGLEADGELGDETLKKLR 326


>gi|221108941|ref|XP_002154985.1| PREDICTED: similar to matrix metalloproteinase 14 [Hydra
           magnipapillata]
          Length = 298

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 4/51 (7%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L             +  A+K  Q    L  +G++D  TL  M+ P
Sbjct: 25  LKRYGYLQTGYSNPN----SLTEAIKKMQKFANLPETGVLDKPTLNLMSTP 71


>gi|115522727|ref|YP_779638.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisA53]
 gi|115516674|gb|ABJ04658.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisA53]
          Length = 467

 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 16/54 (29%), Gaps = 2/54 (3%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
            L++ L   G           F      A++ FQ   G    G      LE + 
Sbjct: 414 ELQQLLAQRGFY--RGTPDGQFGGQTREALRSFQASIGTPADGFATGDVLERLR 465


>gi|157820645|ref|NP_001100629.1| matrix metalloproteinase-19 [Rattus norvegicus]
 gi|149029634|gb|EDL84805.1| matrix metalloproteinase 19 (predicted) [Rattus norvegicus]
 gi|225422918|gb|ACN90949.1| matrix metalloproteinase 19 [Rattus norvegicus]
          Length = 517

 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 5/74 (6%)

Query: 96  ELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPS 154
            +  R L        V    + L+  G L      +  F    +  A++ FQ    L  S
Sbjct: 15  TVSGRALGPAEKEAVV----DYLLQYGYLQKPLEGADDFRLEDITEALRTFQEASELPVS 70

Query: 155 GMVDSSTLEAMNVP 168
           G +D +T   M  P
Sbjct: 71  GQMDDATRARMKQP 84


>gi|146341831|ref|YP_001206879.1| hypothetical protein BRADO4960 [Bradyrhizobium sp. ORS278]
 gi|146194637|emb|CAL78662.1| conserved hypothetical protein; putative signal peptide; putative
           Peptidoglycan binding-like domain [Bradyrhizobium sp.
           ORS278]
          Length = 159

 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 113 RLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
            ++  L   G           FD    +A+  +Q   G   +G ++++  +A+  
Sbjct: 61  AVQRGLTRLGF---DTKADGTFDEQTRAAISRWQEERGYPTTGFLNAAQHKALIT 112


>gi|220921182|ref|YP_002496483.1| lytic murein transglycosylase [Methylobacterium nodulans ORS 2060]
 gi|219945788|gb|ACL56180.1| lytic murein transglycosylase [Methylobacterium nodulans ORS 2060]
          Length = 392

 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 2/58 (3%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
             ++ L++ L           L       +  AV+ +Q+  GL   G    + LE + 
Sbjct: 333 AGLRALQQGLAARSLYA--GPLDGRAGPKLREAVRRYQIAAGLPADGYATPALLEHLR 388


>gi|83375894|gb|ABC17785.1| matrix metalloproteinase 24 variant [Homo sapiens]
          Length = 593

 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 33  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 85


>gi|5729929|ref|NP_006681.1| matrix metalloproteinase-24 preproprotein [Homo sapiens]
 gi|332858203|ref|XP_003316927.1| PREDICTED: matrix metalloproteinase-24 [Pan troglodytes]
 gi|12585280|sp|Q9Y5R2|MMP24_HUMAN RecName: Full=Matrix metalloproteinase-24; Short=MMP-24; AltName:
           Full=Membrane-type matrix metalloproteinase 5;
           Short=MT-MMP 5; Short=MTMMP5; AltName:
           Full=Membrane-type-5 matrix metalloproteinase;
           Short=MT5-MMP; Short=MT5MMP; Contains: RecName:
           Full=Processed matrix metalloproteinase-24; Flags:
           Precursor
 gi|5381386|gb|AAD42962.1|AF131284_1 membrane type 5 matrix metalloproteinase [Homo sapiens]
 gi|5689367|dbj|BAA82967.1| membrane-type-5 matrix metalloproteinase [Homo sapiens]
 gi|220675561|emb|CAX12722.1| matrix metallopeptidase 24 (membrane-inserted) [Homo sapiens]
 gi|225000844|gb|AAI72450.1| Matrix metallopeptidase 24 (membrane-inserted) [synthetic
           construct]
          Length = 645

 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 85  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 137


>gi|313646694|gb|EFS11153.1| putative transposase [Shigella flexneri 2a str. 2457T]
          Length = 203

 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 37/121 (30%), Gaps = 15/121 (12%)

Query: 90  SRGGWPELPIRPLHLGNSSVSVQRLR--ERLIISGDLDPSKGLSVAFDAYVESAVKLFQM 147
            +  W   P   +H  +       L   +RL  +G L  +     ++D  +  ++     
Sbjct: 86  EQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESI----- 140

Query: 148 RHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEA 207
            +GL  + ++   + +        R       L  +     +++  R   +    A    
Sbjct: 141 -NGLYKAEVIHRKSWK-------NRAEVELATLTWVDWYNNRRLPERLGHIPPAEAEKAY 192

Query: 208 V 208
            
Sbjct: 193 Y 193


>gi|254501774|ref|ZP_05113925.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
 gi|222437845|gb|EEE44524.1| Putative peptidoglycan binding domain protein [Labrenzia alexandrii
           DFL-11]
          Length = 132

 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAM 165
            SS  V  ++  L   G       +          A+  +Q  +GL  +G    + L+ M
Sbjct: 72  ASSPLVSGIQGALAAKGY--DPGAVDGRMGPGTAQAISAYQQANGLLVTGQPSQALLDHM 129

Query: 166 N 166
            
Sbjct: 130 R 130


>gi|196231441|ref|ZP_03130299.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
 gi|196224294|gb|EDY18806.1| Peptidoglycan-binding domain 1 protein [Chthoniobacter flavus
           Ellin428]
          Length = 285

 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 108 SVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNV 167
              V+  +  L   G        +    A    A++ +Q+R+GL+ +G ++  TL A+ +
Sbjct: 21  DDQVRNAQTELKSLGFYYGEA--NGQSSAEWAFAIRRYQIRNGLEVTGALNHETLAALGM 78


>gi|281341936|gb|EFB17520.1| hypothetical protein PANDA_012844 [Ailuropoda melanoleuca]
          Length = 493

 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+      +   A   +A++ FQ    L  SG++D +TL  M  P
Sbjct: 4   LEKYGYLNEQVPKDLT-AARFSNAIREFQWVSQLPISGVLDPATLRQMTRP 53


>gi|156405599|ref|XP_001640819.1| predicted protein [Nematostella vectensis]
 gi|156227955|gb|EDO48756.1| predicted protein [Nematostella vectensis]
          Length = 222

 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 135 DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           +  V+ A++ FQ   GL  +G +D  T+  M  P
Sbjct: 14  NHDVKKALEKFQEIAGLPVTGEMDPDTIAQMKKP 47


>gi|302560479|ref|ZP_07312821.1| membrane protein [Streptomyces griseoflavus Tu4000]
 gi|302478097|gb|EFL41190.1| membrane protein [Streptomyces griseoflavus Tu4000]
          Length = 446

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 5/76 (6%)

Query: 98  PIRPL-HLGNSSVSVQRLRERLIISG----DLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
           P R L   G  +  V RL E+L+  G      D         D     A +  Q   G  
Sbjct: 371 PGRALFRPGAVNDQVTRLGEQLVRKGFGRYYADGPGPRWSEADRRNVEAFQRAQGWRGGA 430

Query: 153 PSGMVDSSTLEAMNVP 168
             G     T   + + 
Sbjct: 431 ADGYPGPETWRRLFLS 446


>gi|203463369|ref|YP_002223951.1| gp10 [Mycobacterium phage Solon]
 gi|197312556|gb|ACH62910.1| gp10 [Mycobacterium phage Solon]
          Length = 322

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    +G      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFAGYARVHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDTRPVLLTVSGTGVPWWIGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|121594329|ref|YP_986225.1| hypothetical protein Ajs_1969 [Acidovorax sp. JS42]
 gi|120606409|gb|ABM42149.1| hypothetical protein Ajs_1969 [Acidovorax sp. JS42]
          Length = 581

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 20/135 (14%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQ-----------------RLRERLIIS 121
           + +     I   G W  +P  + L L  +    Q                  ++  LI  
Sbjct: 259 RTLIDLATIELVGKWARVPYWQCLTLEQTHPDFQRQMRDWFDESGGVGQATLVQNSLIAQ 318

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G L     L       + +A+  FQ+   L P+G++D ST E               +L 
Sbjct: 319 GYLQAGTDLLALDSPALRTALTQFQIDSLLVPTGVLDFSTYERAMRHFVTLAP--DGSLQ 376

Query: 182 RIKKLLEQKMGLRYV 196
           R+        G    
Sbjct: 377 RVGWGPSGPTGSMAE 391


>gi|222110962|ref|YP_002553226.1| hypothetical protein Dtpsy_1769 [Acidovorax ebreus TPSY]
 gi|221730406|gb|ACM33226.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
          Length = 581

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 41/135 (30%), Gaps = 20/135 (14%)

Query: 80  KAIAFYQDILSRGGWPELPI-RPLHLGNSSVSVQ-----------------RLRERLIIS 121
           + +     I   G W  +P  + L L  +    Q                  ++  LI  
Sbjct: 259 RTLIDLATIELVGKWARVPYWQCLTLEQTHPDFQRQMRDWFDESGGVGQATLVQNSLIAQ 318

Query: 122 GDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQVNLM 181
           G L     L       + +A+  FQ+   L P+G++D ST E               +L 
Sbjct: 319 GYLQAGTDLLALDSPALRTALTQFQIDSLLVPTGVLDFSTYERAMRHFVTLAP--DGSLQ 376

Query: 182 RIKKLLEQKMGLRYV 196
           R+        G    
Sbjct: 377 RVGWGPSGPTGSMAE 391


>gi|120586977|ref|NP_001073357.1| matrix metalloproteinase-28 [Rattus norvegicus]
 gi|119351063|gb|ABL63427.1| matrix metalloproteinase 28 [Rattus norvegicus]
          Length = 525

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 118 LIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L         S  F      A++ FQ    L  SG++D +TL  M  P
Sbjct: 40  LEKYGYLSEQGSKVPASTQF----SDAIREFQWVSQLPISGVLDRATLRQMTRP 89


>gi|146278531|ref|YP_001168690.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556772|gb|ABP71385.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 267

 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 295 NFIFRQDPGKINAMASTKIEFYSRNN---TYMHDTPEPILFNNVVRFETSGCVRV--RNI 349
            +      G  N + +  +  Y         +H T +     +     ++GC+R+  ++ 
Sbjct: 151 PYAAGLPGGLENPLGARALYLYRGGRDTMFRIHGTVQNASIGH---ATSAGCIRLFNQDA 207

Query: 350 IDLDVWLLKDTPTWSRYHIEEV 371
           IDL       TP   R   E +
Sbjct: 208 IDLYNRTRIGTPVKVRTQAESL 229


>gi|29126959|gb|AAH47614.1| MMP24 protein [Homo sapiens]
          Length = 626

 Score = 36.5 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    + A  +   ++SAV   Q  +G+  +G++D +T+E M  P
Sbjct: 66  LKSYGYLLPYDSRASALHSAKALQSAVSTMQQFYGIPVTGVLDQTTIEWMKKP 118


>gi|301760460|ref|XP_002916079.1| PREDICTED: matrix metalloproteinase-19-like [Ailuropoda
           melanoleuca]
          Length = 547

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L         F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 33  LLQYGYLQKPLEGPDDFRAEDIMEALRTFQEASELPVSGQLDDATRARMRQP 84


>gi|149053668|gb|EDM05485.1| matrix metallopeptidase 28 (epilysin) (predicted) [Rattus
           norvegicus]
          Length = 475

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 118 LIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L         S  F      A++ FQ    L  SG++D +TL  M  P
Sbjct: 40  LEKYGYLSEQGSKVPASTQF----SDAIREFQWVSQLPISGVLDRATLRQMTRP 89


>gi|47209949|emb|CAF89957.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 578

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 118 LIISGDLDPSKGLSVAFDAYV-ESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P    +      V +SAV   Q  +G+  +G +D +T+  M  P
Sbjct: 4   LKNYGYLPPHAVPAPL--ETVRQSAVASMQRFYGIPVTGRLDPTTVAWMRKP 53


>gi|300786602|ref|YP_003766893.1| transglycosylase [Amycolatopsis mediterranei U32]
 gi|299796116|gb|ADJ46491.1| transglycosylase domain-containing protein [Amycolatopsis
           mediterranei U32]
          Length = 221

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 3/72 (4%)

Query: 101 PLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSS 160
               G+ +  ++  + R+   G        +  +     +AV   Q  +G++ SG++   
Sbjct: 153 VYRYGDCADPLKTFQLRMNAFGY---GFTGTGCYLEKTRTAVLDLQRANGINDSGLLGPK 209

Query: 161 TLEAMNVPVDLR 172
           T EA       R
Sbjct: 210 TWEAAWTGKPPR 221


>gi|197337354|ref|YP_002158252.1| LysM domain protein [Vibrio fischeri MJ11]
 gi|197314606|gb|ACH64055.1| LysM domain protein [Vibrio fischeri MJ11]
          Length = 798

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 46/150 (30%), Gaps = 19/150 (12%)

Query: 76  AQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFD 135
           +   +++   + +    G        L   +    V+ ++  L+           S  F 
Sbjct: 455 STLLQSVESLELLAKGNG------VLLKENHKGPEVKSIQNALMKLDFELGISEASENFG 508

Query: 136 AYVESAVKLFQMRHG-----------LDPSGMVDSSTLEAMNVPVDLRIRQLQVNL--MR 182
           +  +  + LFQ  +                G+V  +T+ A++  +      ++  L   R
Sbjct: 509 SMTKQTLTLFQKLYEPSHKTHADYSIGSADGIVGKNTILALDEALQDGWSCIRYELRISR 568

Query: 183 IKKLLEQKMGLRYVLVNIPAASLEAVENGK 212
            K          ++       ++ A + G 
Sbjct: 569 KKLYRRHNSVNDFIGNKNTDLTVRAKQGGT 598


>gi|192824007|ref|YP_001994469.1| gp11 [Mycobacterium phage KBG]
 gi|190610237|gb|ACE79759.1| gp11 [Mycobacterium phage KBG]
          Length = 322

 Score = 36.5 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    +G      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFAGYARIHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDTRPVLLTVSGTGVPWWIGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|260820674|ref|XP_002605659.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
 gi|229290994|gb|EEN61669.1| hypothetical protein BRAFLDRAFT_279941 [Branchiostoma floridae]
          Length = 606

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L+  G L     +       +  A+   Q   GL+ +G +D  TL+ M  P       + 
Sbjct: 51  LMKFGYLKQDGKMRT--GEDLREAIITMQRFGGLEETGKLDEGTLKLMQSPRCGVADIIG 108

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
                     E     RY LV          +  K  L   ++     R TP L   +  
Sbjct: 109 TA--------ETTRKKRYALVG------YYWQ--KKNLTYRIV-----RTTPQLSPYVVH 147

Query: 238 IMFNPYWVI 246
                 + +
Sbjct: 148 DAIRRAFNV 156


>gi|39936101|ref|NP_948377.1| hypothetical protein RPA3038 [Rhodopseudomonas palustris CGA009]
 gi|39649955|emb|CAE28479.1| ErfK/YbiS/YcfS/YnhG [Rhodopseudomonas palustris CGA009]
          Length = 537

 Score = 36.5 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 54/218 (24%), Gaps = 70/218 (32%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R++       +I+K   +  G   + V+I    L   +   +   + V  G     T
Sbjct: 78  PRKRLQLDHKAEKQIEKQATKPQGPVVIAVSIEQQKLRVYDANGLFAETPVSTGMRGHST 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+    + +            I     M  +++                        + W
Sbjct: 138 PMGVFSVIQKSKYHRSN----IYSGAPMPYMQR------------------------ITW 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +                                 +H    P          + GC+R+  
Sbjct: 170 S------------------------------GIALHAGALPGY------PASHGCIRMPM 193

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
              + +W       W+R     +V     TPV  +  +
Sbjct: 194 TFAVKMW------GWTRMGARVIVAPGDVTPVSFSHPL 225


>gi|192291819|ref|YP_001992424.1| hypothetical protein Rpal_3448 [Rhodopseudomonas palustris TIE-1]
 gi|192285568|gb|ACF01949.1| ErfK/YbiS/YcfS/YnhG family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 537

 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 54/218 (24%), Gaps = 70/218 (32%)

Query: 169 VDLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQT 228
              R++       +I+K   +  G   + V+I    L   +   +   + V  G     T
Sbjct: 78  PRKRLQLDHKAEKQIEKQATKPQGPVVIAVSIEQQKLRVYDANGLFAETPVSTGMRGHST 137

Query: 229 PILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDW 288
           P+    + +            I     M  +++                        + W
Sbjct: 138 PMGVFSVIQKSKYHRSN----IYSGAPMPYMQR------------------------ITW 169

Query: 289 NSPEPPNFIFRQDPGKINAMASTKIEFYSRNNTYMHDTPEPILFNNVVRFETSGCVRVRN 348
           +                                 +H    P          + GC+R+  
Sbjct: 170 S------------------------------GIALHAGALPGY------PASHGCIRMPM 193

Query: 349 IIDLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEV 386
              + +W       W+R     +V     TPV  +  +
Sbjct: 194 TFAVKMW------GWTRMGARVIVAPGDVTPVSFSHPL 225


>gi|182679997|ref|YP_001834143.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635880|gb|ACB96654.1| lytic murein transglycosylase [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 422

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 32/99 (32%), Gaps = 14/99 (14%)

Query: 72  KETIAQTEKAIAFYQDILSRGG----WPELPIRPLHLGNSSVSVQRLRERLIISGDLDPS 127
            +  A +   +A  Q+I   GG    WPE     L    S      +++RL   G     
Sbjct: 326 SDAYALSLAWLA--QEIKGEGGLRGSWPE-TGPEL----SRKEKAAIQQRLQKLGFY--Q 376

Query: 128 KGLSVAFDAYVESAVKLFQMRHG-LDPSGMVDSSTLEAM 165
             L   F      A+  +Q+R       G    +    +
Sbjct: 377 GTLDGRFGQASRDAIHAYQLRVDPGKADGFATQALYRQL 415


>gi|154247769|ref|YP_001418727.1| lytic murein transglycosylase [Xanthobacter autotrophicus Py2]
 gi|154161854|gb|ABS69070.1| lytic murein transglycosylase [Xanthobacter autotrophicus Py2]
          Length = 416

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNV 167
             +Q +++RL  +G    + G      A    AV+ FQ + G+    G    + L A+  
Sbjct: 357 AELQEVQQRLTAAGF--DTGGADGRVGADTMRAVRGFQQKVGITPADGYASIAVLNALRQ 414


>gi|119351065|gb|ABL63428.1| matrix metalloproteinase 28 [Rattus norvegicus]
          Length = 507

 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 118 LIISGDLDPSK---GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L         S  F      A++ FQ    L  SG++D +TL  M  P
Sbjct: 40  LEKYGYLSEQGSKVPASTQF----SDAIREFQWVSQLPISGVLDRATLRQMTRP 89


>gi|328545614|ref|YP_004305723.1| Lysozyme [polymorphum gilvum SL003B-26A1]
 gi|326415355|gb|ADZ72418.1| Lysozyme [Polymorphum gilvum SL003B-26A1]
          Length = 313

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 15/46 (32%), Gaps = 3/46 (6%)

Query: 115 RERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRH-GLDPSGMVDS 159
           +  L   G  D    L          AV+ FQ  H  L   G++  
Sbjct: 189 QAILARLGHYD--GALDGLAGPRTTKAVRAFQSGHPHLKVDGLLGP 232


>gi|157786402|ref|YP_001491579.1| gp8 [Mycobacterium phage U2]
 gi|40769322|gb|AAR89648.1| gp8 [Mycobacterium phage U2]
          Length = 322

 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 101 PLHLGNSSVSVQRLRERLII--SGDLD---PSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           PL LG+ + +V+R RE +    +G      P    +  F    E+    ++ R      G
Sbjct: 2   PLKLGDRNPTVRRWREVMAARFAGYARIHGPLPTDTDEFGPRAEAWQTEYESRTFQPLDG 61

Query: 156 MVDSSTLEAMNVPV--DLRIRQLQVNLMRIKKL------LEQKMGLRYVLVNI-PAASLE 206
           +V    L A+ +P   D R   L V+   +         + +++G  Y+   + P  + +
Sbjct: 62  IVSDDDLRALGIPAPEDSRPVLLTVSGTGVPWWIGPDADVARRLGDVYLWRPVGPPYTAQ 121

Query: 207 AVENG 211
           A   G
Sbjct: 122 AFPMG 126


>gi|163796472|ref|ZP_02190432.1| Sel1 domain protein repeat-containing protein [alpha
           proteobacterium BAL199]
 gi|159178322|gb|EDP62866.1| Sel1 domain protein repeat-containing protein [alpha
           proteobacterium BAL199]
          Length = 829

 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSG 155
           G +   V  ++  L   G  D    L          A+  +Q+R GL  +G
Sbjct: 769 GVAEEDVAAIQRGLSRLGLYD--GALDGIAGPKTRDAISRYQVREGLPANG 817


>gi|114320728|ref|YP_742411.1| hypothetical protein Mlg_1574 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227122|gb|ABI56921.1| protein of unknown function DUF214 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 789

 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 82  IAFYQDILSRGGWPELPIRPLH--LGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVE 139
           +A  Q +L  G    +    L    G+ +  V+ LRER  I+G  +    +   +D  + 
Sbjct: 598 LATLQRLLGEG--SAVSGARLQLLPGDRASVVEALRERPGIAGIAEREAAIDSFYD-TLA 654

Query: 140 SAVKLF 145
             V +F
Sbjct: 655 ETVLMF 660


>gi|332845157|ref|XP_001165615.2| PREDICTED: matrix metalloproteinase-25 [Pan troglodytes]
          Length = 562

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G +D  T+  M+ P
Sbjct: 36  LTRYGYLPPPHPAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMHKP 88


>gi|75675776|ref|YP_318197.1| hypothetical protein Nwi_1584 [Nitrobacter winogradskyi Nb-255]
 gi|74420646|gb|ABA04845.1| ErfK/YbiS/YcfS/YnhG [Nitrobacter winogradskyi Nb-255]
          Length = 493

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 12/67 (17%)

Query: 320 NTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTTP 379
              MH    P          + GC+R+   +D  V +      W+R     ++   + TP
Sbjct: 176 GIAMHAGALPGY------PASHGCIRM--PLDFAVKM----WGWTRIGARVIITPGEVTP 223

Query: 380 VKLATEV 386
              +  +
Sbjct: 224 ADFSHPL 230


>gi|114567173|ref|YP_754327.1| hypothetical protein Swol_1658 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338108|gb|ABI68956.1| hypothetical protein Swol_1658 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 183

 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 12/93 (12%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S+  +A   +  A Y+D      +  + I+ L +      +      LI    L      
Sbjct: 99  SEPGVAPVRRPRASYRDE----PYSRVNIQLLTIEELDAVIAE----LIKQEYLQQKPAN 150

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLE 163
                  + +A+  FQ  H L P+G VD++TL+
Sbjct: 151 E----EELSNALSQFQSDHNLTPTGQVDAATLK 179


>gi|260432274|ref|ZP_05786245.1| peptidoglycan binding domain protein [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260416102|gb|EEX09361.1| peptidoglycan binding domain protein [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 432

 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 17/87 (19%)

Query: 87  DILSRGG----WPELPIRPLHLGNSSVSVQR---LRERLIISGDLDPSKGLSVAFDAYVE 139
            +  +G     WP         G+  +SV     L+ RL ++G    ++ +         
Sbjct: 356 RLAGQGPFRANWPR--------GDRVLSVAERKELQLRLTLAGF--DTQAIDGRIGPNTI 405

Query: 140 SAVKLFQMRHGLDPSGMVDSSTLEAMN 166
           +A++ +Q+  GL P G      LE M 
Sbjct: 406 NALRAYQVARGLVPDGYATVQLLERMR 432


>gi|281343370|gb|EFB18954.1| hypothetical protein PANDA_015650 [Ailuropoda melanoleuca]
          Length = 554

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%)

Query: 114 LRERLIISGDLDPSK--GLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP--- 168
           L+  L   G L P      +        +A+   Q  +GL  +G  D+ T++AM  P   
Sbjct: 6   LQAWLQQYGYLPPGDLRTHTQRSPQSFSAAIAAMQKFYGLRVTGKADADTMKAMRRPRCG 65

Query: 169 -VDLRIRQLQVNLMRIK 184
             D    +++ N+ R +
Sbjct: 66  VPDKFGAEIKANVRRKR 82


>gi|297199933|ref|ZP_06917330.1| membrane protein [Streptomyces sviceus ATCC 29083]
 gi|197710401|gb|EDY54435.1| membrane protein [Streptomyces sviceus ATCC 29083]
          Length = 444

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 8/77 (10%)

Query: 97  LPIRP----LHLGNSSVSVQRLRERLIISGDLDP-SKGLSVAFDAYVESAVKLFQMRHG- 150
           +P  P       G ++  V +L  +L+  G     + G    +       V+ FQ   G 
Sbjct: 366 VPGYPGRAMFRPGATNEYVTQLGRQLVKKGFGKYYTTGPGPRWGEPDRRGVEAFQRAQGW 425

Query: 151 --LDPSGMVDSSTLEAM 165
                 G     T   +
Sbjct: 426 RGGAADGYPGPETWRRL 442


>gi|254521509|ref|ZP_05133564.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
 gi|219719100|gb|EED37625.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas sp. SKA14]
          Length = 352

 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 20/74 (27%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +   +H    P          + GCVR+         L  +T            +   T 
Sbjct: 123 DGIALHGGSLPG------HPASHGCVRL--PQAFAQKLFSET------------QRGDTV 162

Query: 379 PVKLATEVPVHFVY 392
            V  A   P+   Y
Sbjct: 163 VVADAKSSPMTLAY 176


>gi|328783162|ref|XP_001120736.2| PREDICTED: matrix metalloproteinase-25-like [Apis mellifera]
          Length = 419

 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 113 RLRERLIISGDLDPSKGLSV--AFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVD 170
           +++  L+  G L  S   +     D  +  A+K  Q   G+  +G +D +T++ M +P  
Sbjct: 30  KVQNYLMKFGYLPQSDLETGNLRTDDQLTDAIKNLQRFGGIPVTGDIDEATMKLMRLPRC 89

Query: 171 LRIRQLQVNLMRIK 184
               ++     R++
Sbjct: 90  GLPDKVDPRYTRVR 103


>gi|90424308|ref|YP_532678.1| lytic murein transglycosylase [Rhodopseudomonas palustris BisB18]
 gi|90106322|gb|ABD88359.1| Lytic murein transglycosylase [Rhodopseudomonas palustris BisB18]
          Length = 405

 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 109 VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGL-DPSGMVDSSTLEAMNV 167
             VQ ++ RL  +G    + G           A++ +Q + GL    G      L A+  
Sbjct: 346 AEVQEMQTRLTRAGF--DTGGTDGRVGNDTMKAIRDYQSKIGLSPADGYGGLQVLAALRQ 403


>gi|301776492|ref|XP_002923668.1| PREDICTED: matrix metalloproteinase-28-like [Ailuropoda
           melanoleuca]
          Length = 635

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L+      +   A   +A++ FQ    L  SG++D +TL  M  P
Sbjct: 71  LEKYGYLNEQVPKDLT-AARFSNAIREFQWVSQLPISGVLDPATLRQMTRP 120


>gi|257093810|ref|YP_003167451.1| lytic murein transglycosylase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046334|gb|ACV35522.1| lytic murein transglycosylase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 410

 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 28/92 (30%), Gaps = 2/92 (2%)

Query: 81  AIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVES 140
           AIA   D +  G     P      G S    + L+  L   G   P   +     A    
Sbjct: 321 AIAHLSDRIKGGKPFVTPWPTDDPGLSRRERRELQTLLAARGY--PIGEIDGMIGANSRQ 378

Query: 141 AVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLR 172
           A++  Q R G+   G      L  +      R
Sbjct: 379 AIQAEQKRLGVAADGRPGQKLLNTLRADPPSR 410


>gi|325000684|ref|ZP_08121796.1| hypothetical protein PseP1_18032 [Pseudonocardia sp. P1]
          Length = 430

 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 32/149 (21%)

Query: 216 RSTVIVGRVDRQTPILHSRINRIMFNPYWVIPRSIIQKDMMALLRQDPQYLKDNNIHMID 275
            +TV V    R T +          +  + + RS I K               ++  ++ 
Sbjct: 245 HTTVRVHGALRGTDLGDGTWATEDVDRTFTVGRSQIVK-----------ADTRSHQIVVV 293

Query: 276 EKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMA-STKIEFYSR---------------- 318
             GKE+   +  +     PN + R   G    M  S K+   +                 
Sbjct: 294 RDGKEIARYDASYGMESDPNRVTR--SGTHVVMGKSEKVLMTNEAYGYVDEPQYWAVRIS 351

Query: 319 -NNTYMHDTPEPILFNNVVRFETSGCVRV 346
            N  ++H  P    +    R  + GCV +
Sbjct: 352 NNGEFIHANPS-SSYAQGNRNVSHGCVNL 379


>gi|284042052|ref|YP_003392392.1| peptidoglycan-binding protein [Conexibacter woesei DSM 14684]
 gi|283946273|gb|ADB49017.1| Peptidoglycan-binding domain 1 protein [Conexibacter woesei DSM
           14684]
          Length = 405

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 95  PELPI-RPLHLGNSS-VSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLD 152
             +P+ RP   G      VQ+L   L   G       +  +F     +A++  Q   G+ 
Sbjct: 112 GTVPMWRPFERGMPDGPDVQQLEAGLQAMGYFA--GTVDRSFTELTATAIERMQRALGVS 169

Query: 153 PSGMVDSSTLEAMNVPVDLR 172
              +    T        D  
Sbjct: 170 C--VAPPRTARRAPSAADSP 187


>gi|12060394|dbj|BAB20584.1| membrane-type 6 matrix metalloproteinase [Homo sapiens]
          Length = 562

 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFD--AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L P             +  A+K+ Q   GL  +G +D  T+  M  P
Sbjct: 36  LTRYGYLPPPHRAQAQLQSPEKLRDAIKVMQRFAGLPETGRMDPGTVATMRKP 88


>gi|270012816|gb|EFA09264.1| matrix metalloproteinase 2 [Tribolium castaneum]
          Length = 701

 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 114 LRERLIISGDLDPSKGLSVAF----DAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           ++  L   G +D       AF    +  V  A+K  Q   G+  +G +D  TL+ +N P
Sbjct: 106 VQRYLTRFGYMD--ATADGAFALRTEESVRDAIKDMQEFAGIPVTGRLDERTLKLLNTP 162


>gi|213612519|ref|ZP_03370345.1| hypothetical protein SentesTyp_08467 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 166

 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 3/67 (4%)

Query: 190 KMGLRYVLVNIPAASLEAVENGK-VGLRSTVIVGRV--DRQTPILHSRINRIMFNPYWVI 246
                 +++N+    L   + GK       + +G++  D  TP + + I+    NP W  
Sbjct: 98  DAPREGIVINLAELRLYYYQPGKNTVTVYPIGIGQLGGDTLTPTMVTTISDKRANPTWTP 157

Query: 247 PRSIIQK 253
             +I  +
Sbjct: 158 TTNIRAR 164


>gi|260820672|ref|XP_002605658.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
 gi|229290993|gb|EEN61668.1| hypothetical protein BRAFLDRAFT_264562 [Branchiostoma floridae]
          Length = 499

 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 23/129 (17%)

Query: 118 LIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVPVDLRIRQLQ 177
           L+  G L     +       +  A+   Q   GL+ +G +D  TL+ M  P       + 
Sbjct: 51  LMKFGYLKQDGKMRT--GEDLREAIITMQRFGGLEETGKLDEGTLKLMQSPRCGVADIIG 108

Query: 178 VNLMRIKKLLEQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINR 237
                     E     RY LV          +  K  L   ++     R TP L   +  
Sbjct: 109 TA--------ETTRKKRYALVG------YYWQ--KKNLTYRIV-----RTTPQLSPYVVH 147

Query: 238 IMFNPYWVI 246
                 + +
Sbjct: 148 DAIRRAFNV 156


>gi|194364758|ref|YP_002027368.1| hypothetical protein Smal_0980 [Stenotrophomonas maltophilia
           R551-3]
 gi|194347562|gb|ACF50685.1| ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 361

 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 20/74 (27%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +   +H    P          + GCVR+         L  +T            +   T 
Sbjct: 132 DGIALHGGSLPG------HPASHGCVRL--PQAFAQKLFSET------------QRGDTV 171

Query: 379 PVKLATEVPVHFVY 392
            V  A   P+   Y
Sbjct: 172 VVADAKSSPMTLAY 185


>gi|126732466|ref|ZP_01748265.1| PKD repeat protein [Sagittula stellata E-37]
 gi|126707105|gb|EBA06172.1| PKD repeat protein [Sagittula stellata E-37]
          Length = 632

 Score = 36.5 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 12/95 (12%)

Query: 114 LRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL----EAMNVPV 169
           ++  L   G           F     SAV+ FQ  + ++ SG + +S L    +  N   
Sbjct: 443 IQHTLDALGY--GLGEPDGLFGPASRSAVRAFQKENLIEESGYLSASLLDRIADEYNGAP 500

Query: 170 DLRIRQLQVNLMRIKKLLEQKMGLRYVLVNIPAAS 204
                  ++  +R +          +     PA  
Sbjct: 501 ATLDGTYRI-FIRRRW-----DDAYHRRKPDPAYR 529


>gi|126730969|ref|ZP_01746778.1| Lytic murein transglycosylase [Sagittula stellata E-37]
 gi|126708685|gb|EBA07742.1| Lytic murein transglycosylase [Sagittula stellata E-37]
          Length = 333

 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 103 HLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTL 162
             G      + L+  L  +G    +           E+A++ +Q   G+  +G    + L
Sbjct: 272 RYGLDLDDRKALQRGLTRAGF--DAGTPDGVLGKKTEAAIRAYQQSRGMTVTGSPSRALL 329

Query: 163 EAMN 166
           +A+ 
Sbjct: 330 DAVA 333


>gi|73968283|ref|XP_848410.1| PREDICTED: similar to Matrix metalloproteinase-19 precursor
           (MMP-19) (Matrix metalloproteinase RASI) (MMP-18) [Canis
           familiaris]
          Length = 547

 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFDAY-VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L+  G L         F    +  A++ FQ    L  SG +D +T   M  P
Sbjct: 33  LLQYGYLQKPLEGPDNFRPEDIMEALRTFQEASELPVSGQLDDATRARMRQP 84


>gi|225871960|ref|YP_002753414.1| hypothetical protein ACP_0269 [Acidobacterium capsulatum ATCC
           51196]
 gi|225794111|gb|ACO34201.1| hypothetical protein ACP_0269 [Acidobacterium capsulatum ATCC
           51196]
          Length = 151

 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 106 NSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            +S  V++++  LI    L         ++   ++A++ +Q  HG
Sbjct: 55  MASSRVEQIQAALIREHYLTGEPNGD--WNDETQAAMRKYQADHG 97


>gi|110633235|ref|YP_673443.1| peptidoglycan binding domain-containing protein [Mesorhizobium sp.
           BNC1]
 gi|110284219|gb|ABG62278.1| Peptidoglycan-binding domain 1 [Chelativorans sp. BNC1]
          Length = 266

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 4/96 (4%)

Query: 71  SKETIAQTEKAIAFYQDILSRGGWPELPIRPLHLGNSSVSVQRLRERLIISGDLDPSKGL 130
           S+   A   +         ++             G+S  ++ +++  L   G  +    +
Sbjct: 169 SQIDGALLHQLGLRDDGQAAQEASTAPQTASAEPGDS--NISKVQAGLKAFG--NDGIEI 224

Query: 131 SVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEAMN 166
                     A++ FQ   GL  +G  D+  +  M 
Sbjct: 225 DGMMGERTREAIREFQSLFGLPVTGEPDAPLVAKMR 260


>gi|260818324|ref|XP_002604333.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
 gi|229289659|gb|EEN60344.1| hypothetical protein BRAFLDRAFT_125272 [Branchiostoma floridae]
          Length = 524

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 118 LIISGDLDPSKGLSVAFD-AYVESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L   G L            + V +A+KL Q  +GL  +G +D STLEAM  P
Sbjct: 74  LENYGYLREEDMRDDIASISDVSAAIKLVQYNYGLRMTGRMDESTLEAMRRP 125


>gi|190573161|ref|YP_001971006.1| hypothetical protein Smlt1135 [Stenotrophomonas maltophilia K279a]
 gi|190011083|emb|CAQ44692.1| putative ErfK/YbiS/YcfS/YnhG family protein [Stenotrophomonas
           maltophilia K279a]
          Length = 361

 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 20/74 (27%), Gaps = 20/74 (27%)

Query: 319 NNTYMHDTPEPILFNNVVRFETSGCVRVRNIIDLDVWLLKDTPTWSRYHIEEVVKTRKTT 378
           +   +H    P          + GCVR+         L  +T            +   T 
Sbjct: 132 DGIALHGGSLPG------HPASHGCVRL--PQAFAQKLFSET------------QRGDTV 171

Query: 379 PVKLATEVPVHFVY 392
            V  A   P+   Y
Sbjct: 172 VVADAKSSPMTLAY 185


>gi|326533208|dbj|BAJ93576.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 357

 Score = 36.2 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +      LR  L   G    +   +   D  V   V L+Q   GL  +G +D+ TL+ 
Sbjct: 57  GANGSVTDGLRRYLARFGYASSAPDDA---DGRVV--VSLYQSTLGLPVTGRLDAPTLDL 111

Query: 165 MNVP 168
           +  P
Sbjct: 112 LATP 115


>gi|326492816|dbj|BAJ90264.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score = 36.2 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 105 GNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHGLDPSGMVDSSTLEA 164
           G +      LR  L   G    +   +   D  V   V L+Q   GL  +G +D+ TL+ 
Sbjct: 56  GANGSVTDGLRRYLARFGYASSAPDDA---DGRVV--VSLYQSTLGLPVTGRLDAPTLDL 110

Query: 165 MNVP 168
           +  P
Sbjct: 111 LATP 114


>gi|148265496|ref|YP_001232202.1| peptidoglycan binding domain-containing protein [Geobacter
           uraniireducens Rf4]
 gi|146398996|gb|ABQ27629.1| Peptidoglycan-binding domain 1 protein [Geobacter uraniireducens
           Rf4]
          Length = 580

 Score = 36.2 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 3/57 (5%)

Query: 95  PELPI-RPLHLGNSSVSVQRLRERLIISGDLDPSKGLSVAFDAYVESAVKLFQMRHG 150
            +LP  R L  G S   V++L++ L   G       +   +      AV  +    G
Sbjct: 118 GKLPAYRDLVPGISGDDVRQLQQGLKRLGY--HPGPIDGIYTHQTSIAVAKWYKSKG 172


>gi|302560700|ref|ZP_07313042.1| secreted protein [Streptomyces griseoflavus Tu4000]
 gi|302478318|gb|EFL41411.1| secreted protein [Streptomyces griseoflavus Tu4000]
          Length = 195

 Score = 36.2 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 16/89 (17%)

Query: 110 SVQRLRERLI----ISGDLDPSKGLSVAFDAYVESAVKLFQM--RHGLDPSGMV------ 157
            + +LR +L      + D   +       D  V+ ++ LFQ    HG +  G +      
Sbjct: 93  EIAQLRLKLRTSMRATQDALETAAAE---DQSVKESLALFQRLSAHGHELDGELRRMESE 149

Query: 158 -DSSTLEAMNVPVDLRIRQLQVNLMRIKK 185
            D +T+ A    +  R  ++  +   ++ 
Sbjct: 150 PDRATVAARLADLRERTERITSSADALRW 178


>gi|119897349|ref|YP_932562.1| hypothetical protein azo1058 [Azoarcus sp. BH72]
 gi|119669762|emb|CAL93675.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 398

 Score = 36.2 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 50/189 (26%), Gaps = 51/189 (26%)

Query: 258 LLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINAMASTKIEFYS 317
             R    Y   +     ++  +      +            R      +   +  + + +
Sbjct: 157 KPRFVADYYASHGKAGAEKMREGDNRTPLGVYHVTSFIEPKRLPDFYGS--GAFPLNYPN 214

Query: 318 ---------RNNTYMHDTPEPILFNNVVRFETSGCVRVRN------------------II 350
                     +  ++H TP    ++   +  + GCV + N                  I 
Sbjct: 215 DWDKRLGRTGHGIWLHGTPS-DTYSRPPKA-SEGCVVLTNQDFTSLSSYVEPGSTPVIIS 272

Query: 351 DLDVWLLKDTPTWSRYHIEEVVKTRKTTPVKLATEVPVHFVYISAWSPKDSII-----QF 405
           +   WL  D    SR  + + ++  +     L                 D ++     +F
Sbjct: 273 NEVEWLSLDDWQSSRRSLNDAIERWRRDWESL---------------DVDRLLSNYSREF 317

Query: 406 RDDIYGLDN 414
           R D Y  D 
Sbjct: 318 RSDRYDRDG 326


>gi|157818219|ref|NP_001099638.1| matrix metallopeptidase 15 [Rattus norvegicus]
 gi|149032397|gb|EDL87288.1| rCG39153 [Rattus norvegicus]
          Length = 657

 Score = 36.2 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 118 LIISGDLDPSKGLSVAFDAY--VESAVKLFQMRHGLDPSGMVDSSTLEAMNVP 168
           L + G L           +   + SA+   Q  +G+  +G++D  T   M  P
Sbjct: 53  LRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKRP 105


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.310    0.137    0.396 

Lambda     K      H
   0.267   0.0422    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,605,969,606
Number of Sequences: 14124377
Number of extensions: 150479857
Number of successful extensions: 617354
Number of sequences better than 10.0: 6459
Number of HSP's better than 10.0 without gapping: 3060
Number of HSP's successfully gapped in prelim test: 3399
Number of HSP's that attempted gapping in prelim test: 604184
Number of HSP's gapped (non-prelim): 8458
length of query: 431
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 289
effective length of database: 2,837,132,096
effective search space: 819931175744
effective search space used: 819931175744
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 83 (36.5 bits)