RPSBLAST alignment of GI: 254780350 and protein with PDBid: 1zat
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A Length = 250
Score = 55.0 bits (132), Expect = 3e-08
Identities = 19/178 (10%), Positives = 41/178 (23%), Gaps = 56/178 (31%)
Query: 188 EQKMGLRYVLVNIPAASLEAVENGKVGLRSTVIVGRVDRQTPILHSRINRIMFNPYWVIP 247
+ Y+ V++ + ++GKV L + ++ G+ TP + +
Sbjct: 121 HPLIEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTPAGVFYVWNKEEDATLKGT 180
Query: 248 RSIIQKDMMALLRQDPQYLKDNNIHMIDEKGKEVFVEEVDWNSPEPPNFIFRQDPGKINA 307
D G
Sbjct: 181 N----------------------------------------------------DDGTPYE 188
Query: 308 MASTKIEFYSRNNTYMHDTPEPILF--NNVVRFETSGCVRVRN--IIDLDVWLLKDTP 361
+HD+ + + + GC+ + +L + K TP
Sbjct: 189 SPVNYWMPIDWTGVGIHDSDWQPEYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTP 246