HHsearch alignment for GI: 254780351 and conserved domain: COG1339

>COG1339 Transcriptional regulator of a riboflavin/FAD biosynthetic operon [Transcription / Coenzyme metabolism].
Probab=97.87  E-value=6.3e-05  Score=51.57  Aligned_cols=62  Identities=26%  Similarity=0.295  Sum_probs=54.0

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             96889999985477105679999999778878863610071056445788999999999999999
Q gi|254780351|r   70 ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRH  134 (171)
Q Consensus        70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~  134 (171)
T Consensus        19 ~~t~~ela~~l~~S~qta~R~l~~le~~~~I~R~~~~---~Gq~i~iTekG~~~L~~~~~d~~r~   80 (214)
T COG1339          19 KVTSSELAKRLGVSSQTAARKLKELEDEGYITRTISK---RGQLITITEKGIDLLYKEYEDLSRI   80 (214)
T ss_pred             CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECC---CCCEEEEHHHHHHHHHHHHHHHHHH
T ss_conf             0208999988574707788998864117847888337---9848981676899999999999999