HHsearch alignment for GI: 254780351 and conserved domain: COG1846
>COG1846 MarR Transcriptional regulators [Transcription].
Probab=99.65 E-value=8.5e-15 Score=115.05 Aligned_cols=105 Identities=30% Similarity=0.398 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHCCC-CCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 99999999999932179-68899999854771056799999997788788636100710564457889999999999999
Q gi|254780351|r 54 DVNAVQALLLFNIGDLE-LTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQ 132 (171)
Q Consensus 54 ~l~~~q~~~L~~~~~~~-~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~ 132 (171)
T Consensus 19 ~l~~~q~~~L~~l~~~~~~~~~~la~~l~~~~~~vt~~l~~Le~~glv~r~~~~~DrR~~~l~lT~~G~~~~~~~~~~~~ 98 (126)
T COG1846 19 GLTPPQYQVLLALYEAGGITVKELAERLGLDRSTVTRLLKRLEDKGLIERLRDPEDRRAVLVRLTEKGRELLEQLLPAAQ 98 (126)
T ss_pred CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHH
T ss_conf 99989999999999848999999999978788889999999998899367438888631243556215999999788899
Q ss_pred HHHHHHHHHCCCCHHH-HHHHHHHHHHHH
Q ss_conf 9999998534999899-999999999999
Q gi|254780351|r 133 RHIESIDKVGGLSVDD-FIAMNKLLQRLN 160 (171)
Q Consensus 133 ~~~~~l~~~~~ls~ee-~~~l~~~L~rle 160 (171)
T Consensus 99 ~~~~~~--~~~l~~~e~~~~l~~l~~~~~ 125 (126)
T COG1846 99 ELLAEI--LAGLSEEELRKLLRKLLEKLE 125 (126)
T ss_pred HHHHHH--HHCCCHHHHHHHHHHHHHHHH
T ss_conf 999999--864999999999999998753