HHsearch alignment for GI: 254780351 and conserved domain: COG2345
>COG2345 Predicted transcriptional regulator [Transcription].
Probab=98.05 E-value=0.00012 Score=49.87 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=73.2
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC--CCCEEEEEECHHHHHHHHHH-HHHHHHHH
Q ss_conf 9999999321796889999985477105679999999778878863610--07105644578899999999-99999999
Q gi|254780351|r 59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRI--DKRSIRISLTQSGKEIAETI-SQLYQRHI 135 (171)
Q Consensus 59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~--D~R~~~i~LT~~G~~~~~~~-~~~~~~~~ 135 (171)
T Consensus 14 ~~il~lL~~~g~~sa~elA~~Lgis~~avR~HL~~Le~~Glv~~~~~~~g~GRP~~~y~Lt~~g~~~f~~~y~~l~~~~l 93 (218)
T COG2345 14 ERILELLKKSGPVSADELAEELGISPMAVRRHLDDLEAEGLVEVERQQGGRGRPAKLYRLTEKGREQFPKRYGELALALL 93 (218)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHH
T ss_conf 99999983169824999998859998999999999986866687642578999733322002626544532489999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999853499989999999999999999854673
Q gi|254780351|r 136 ESIDKVGGLSVDDFIAMNKLLQRLNRFWGDQIA 168 (171)
Q Consensus 136 ~~l~~~~~ls~ee~~~l~~~L~rler~~~~~~~ 168 (171)
T Consensus 94 ~~l~---~~~G~--~~l~~~l~~r~~~~~~~~~ 121 (218)
T COG2345 94 DALE---ETGGE--EALNAFLEKRAQAIGAQYR 121 (218)
T ss_pred HHHH---HHCCH--HHHHHHHHHHHHHHHHHHH
T ss_conf 9999---85459--9999999999999999976