HHsearch alignment for GI: 254780351 and conserved domain: COG3413

>COG3413 Predicted DNA binding protein [General function prediction only].

Probab=93.17  E-value=0.25  Score=28.45  Aligned_cols=51  Identities=18%  Similarity=0.072  Sum_probs=39.1

Q ss_pred             HHHHCCCCCCHHHHHHHHHH-HCC----C--CCHHHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf             98502579999999999993-217----9--688999998547710567999999977
Q gi|254780351|r   47 FERQGRSDVNAVQALLLFNI-GDL----E--LTAGELRSRGYYLGSNVSYNLKKLIDL   97 (171)
Q Consensus        47 l~~~g~~~l~~~q~~~L~~~-~~~----~--~t~~eLa~~l~i~~~tvs~~i~~Le~~   97 (171)
T Consensus       148 ~~~~~~~~LTdrQ~~vL~~A~~~GYFd~PR~~~l~dLA~~lGISkst~~ehLRrAe~K  205 (215)
T COG3413         148 FVEIGKNDLTDRQLEVLRLAYKMGYFDYPRRVSLKDLAKELGISKSTLSEHLRRAERK  205 (215)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             2345644699999999999998589888765899999999599888999999999999