HHsearch alignment for GI: 254780351 and conserved domain: COG4190

>COG4190 Predicted transcriptional regulator [Transcription].
Probab=96.71  E-value=0.0057  Score=39.01  Aligned_cols=59  Identities=24%  Similarity=0.160  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHH-CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEE
Q ss_conf             9999999999932-1796889999985477105679999999778878863610071056
Q gi|254780351|r   55 VNAVQALLLFNIG-DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIR  113 (171)
Q Consensus        55 l~~~q~~~L~~~~-~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~  113 (171)
T Consensus        62 Lsp~nleLl~~Ia~~~P~Si~ElAe~vgRdv~nvhr~Ls~l~~~GlI~fe~~gq~k~P~~  121 (144)
T COG4190          62 LSPRNLELLELIAQEEPASINELAELVGRDVKNVHRTLSTLADLGLIFFEEDGQRKQPVV  121 (144)
T ss_pred             HCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEE
T ss_conf             192189999998741951389999986754688989999998648278741773137524