HHsearch alignment for GI: 254780351 and conserved domain: PRK03573

>PRK03573 transcriptional regulator SlyA; Provisional.
Probab=99.89  E-value=1.3e-21  Score=158.91  Aligned_cols=128  Identities=19%  Similarity=0.255  Sum_probs=112.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHC-C-CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCC
Q ss_conf             99999999999999999850257999999999999321-7-968899999854771056799999997788788636100
Q gi|254780351|r   31 LVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGD-L-ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRID  108 (171)
Q Consensus        31 lv~rl~r~l~~~~~~~l~~~g~~~l~~~q~~~L~~~~~-~-~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D  108 (171)
T Consensus         8 ~l~r~~r~~r~~~~~~L~~---~gLt~~q~~~L~~L~~~~~g~tq~eLa~~l~v~~~t~tr~ld~LE~~GlI~R~~~~~D   84 (144)
T PRK03573          8 DLARLVRIWRALIDHRLKP---LELTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASD   84 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHH---CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf             9999999999999999886---6998259999999997398989999999979878369999999998889786228676


Q ss_pred             CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             7105644578899999999999999999998534999899999999999999998
Q gi|254780351|r  109 KRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRLNRFW  163 (171)
Q Consensus       109 ~R~~~i~LT~~G~~~~~~~~~~~~~~~~~l~~~~~ls~ee~~~l~~~L~rler~~  163 (171)
T Consensus        85 rR~~~i~LT~~G~~l~~~~~~~~~~~~~~~--~~~ls~eE~~~l~~~L~ki~~Nl  137 (144)
T PRK03573         85 RRAKRIKLTEKAEPLISEMEAVINKTRAEI--LHGISSEEIEQLIKLIAKLEHNI  137 (144)
T ss_pred             CCEEEEEECHHHHHHHHHHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHH
T ss_conf             754676788879999999999999999999--81999999999999999999999