HHsearch alignment for GI: 254780351 and conserved domain: PRK03837

>PRK03837 transcriptional regulator NanR; Provisional.
Probab=96.93  E-value=0.034  Score=34.06  Aligned_cols=91  Identities=13%  Similarity=0.081  Sum_probs=58.5

Q ss_pred             C-CHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHH------------------HHHHHHHHHHH
Q ss_conf             6-8899999854771056799999997788788636100710564457889------------------99999999999
Q gi|254780351|r   71 L-TAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG------------------KEIAETISQLY  131 (171)
Q Consensus        71 ~-t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G------------------~~~~~~~~~~~  131 (171)
T Consensus        38 Lp~E~eLae~lgVSRtpVREAL~~L~~~GlV~~~~g~g---~~V~~~~~~~~~~~~~~~~~~~~~~~~~l~el~~~R~~l  114 (243)
T PRK03837         38 LPSERELMAFFGVGRPSVREALQALKRKGLVQISHGER---ARVSRPSADTIISELSGMAKDFLSSPGGLAHFKQARLFF  114 (243)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCC---CEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             93599999997969789999999999889989950897---068357737689987789998733866799999999999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999999853499989999999999999999854
Q gi|254780351|r  132 QRHIESIDKVGGLSVDDFIAMNKLLQRLNRFWGD  165 (171)
Q Consensus       132 ~~~~~~l~~~~~ls~ee~~~l~~~L~rler~~~~  165 (171)
T Consensus       115 E~~aa~~-Aa~~~t~~~l~~L~~~~~~~~~~~~~  147 (243)
T PRK03837        115 ESGLVRY-AAEHATDEQIALLRKALERNSQSLGD  147 (243)
T ss_pred             HHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             9999999-98729999999999999999986338