HHsearch alignment for GI: 254780351 and conserved domain: PRK09990
>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional.
Probab=95.18 E-value=0.27 Score=28.19 Aligned_cols=85 Identities=16% Similarity=0.198 Sum_probs=50.8
Q ss_pred C-CHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHH-------------HHHHH--HHHHHHHHH
Q ss_conf 6-8899999854771056799999997788788636100710564457889-------------99999--999999999
Q gi|254780351|r 71 L-TAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG-------------KEIAE--TISQLYQRH 134 (171)
Q Consensus 71 ~-t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G-------------~~~~~--~~~~~~~~~ 134 (171)
T Consensus 31 LP~E~eLae~~gVSR~~VREAL~~L~~~GlV~~~~g~G---~~V~~~~~~~~~~~~~~~~~~~~~~i~dl~e~R~~lE~~ 107 (251)
T PRK09990 31 LPSERRLTEKLGVSRSALREGLKVLRGRGIIETAQGRG---SFVARLNRVQDASPLMHLFSSQPRTLYDLLEVRALLEGE 107 (251)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCC---CEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 92399999998979599999999999889979857985---067158701124579998765844299999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 9999853499989999999999999
Q gi|254780351|r 135 IESIDKVGGLSVDDFIAMNKLLQRL 159 (171)
Q Consensus 135 ~~~l~~~~~ls~ee~~~l~~~L~rl 159 (171)
T Consensus 108 aa~lA-A~~~t~~d~~~l~~~~~~~ 131 (251)
T PRK09990 108 SARLA-ALRGTQADFVLITRRYEEM 131 (251)
T ss_pred HHHHH-HHHCCHHHHHHHHHHHHHH
T ss_conf 99999-9839999999999999999