HHsearch alignment for GI: 254780351 and conserved domain: PRK09990

>PRK09990 DNA-binding transcriptional regulator GlcC; Provisional.
Probab=95.18  E-value=0.27  Score=28.19  Aligned_cols=85  Identities=16%  Similarity=0.198  Sum_probs=50.8

Q ss_pred             C-CHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHH-------------HHHHH--HHHHHHHHH
Q ss_conf             6-8899999854771056799999997788788636100710564457889-------------99999--999999999
Q gi|254780351|r   71 L-TAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG-------------KEIAE--TISQLYQRH  134 (171)
Q Consensus        71 ~-t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G-------------~~~~~--~~~~~~~~~  134 (171)
T Consensus        31 LP~E~eLae~~gVSR~~VREAL~~L~~~GlV~~~~g~G---~~V~~~~~~~~~~~~~~~~~~~~~~i~dl~e~R~~lE~~  107 (251)
T PRK09990         31 LPSERRLTEKLGVSRSALREGLKVLRGRGIIETAQGRG---SFVARLNRVQDASPLMHLFSSQPRTLYDLLEVRALLEGE  107 (251)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCC---CEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf             92399999998979599999999999889979857985---067158701124579998765844299999999999999


Q ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf             9999853499989999999999999
Q gi|254780351|r  135 IESIDKVGGLSVDDFIAMNKLLQRL  159 (171)
Q Consensus       135 ~~~l~~~~~ls~ee~~~l~~~L~rl  159 (171)
T Consensus       108 aa~lA-A~~~t~~d~~~l~~~~~~~  131 (251)
T PRK09990        108 SARLA-ALRGTQADFVLITRRYEEM  131 (251)
T ss_pred             HHHHH-HHHCCHHHHHHHHHHHHHH
T ss_conf             99999-9839999999999999999