HHsearch alignment for GI: 254780351 and conserved domain: PRK10082
>PRK10082 putative DNA-binding transcriptional regulator; Provisional.
Probab=97.45 E-value=0.0016 Score=42.49 Aligned_cols=82 Identities=10% Similarity=0.144 Sum_probs=59.8
Q ss_pred CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
Q ss_conf 799999999999932179688999998547710567999999977---88788636100710564457889999999999
Q gi|254780351|r 53 SDVNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQ 129 (171)
Q Consensus 53 ~~l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~ 129 (171)
T Consensus 9 ~nmelr~L~~F~~Vae~-gSFs~AA~~L~itQpavS~~I~~LE~~LGv~Lf~-------R~tr~v~LT~aG~~~~~~a~~ 80 (303)
T PRK10082 9 HNIETKWLYDFLTLEKC-RNFSQAAVSRNVSQPAFSRRIRALEQAIGVELFN-------RQVTPLQLSEQGKIFHSQIRH 80 (303)
T ss_pred CCCCHHHHHHHHHHHHC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEE-------ECCCCEEECHHHHHHHHHHHH
T ss_conf 46629999999999980-9999999997898159999999999996995086-------799983036889999999999
Q ss_pred HHHHHHHHHHHHC
Q ss_conf 9999999998534
Q gi|254780351|r 130 LYQRHIESIDKVG 142 (171)
Q Consensus 130 ~~~~~~~~l~~~~ 142 (171)
T Consensus 81 il~~le~~~~~l~ 93 (303)
T PRK10082 81 LLQQLESNLAELR 93 (303)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986