HHsearch alignment for GI: 254780351 and conserved domain: PRK10360
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional.
Probab=90.18 E-value=1.3 Score=23.84 Aligned_cols=50 Identities=6% Similarity=0.033 Sum_probs=38.4
Q ss_pred HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 985025799999999999932179688999998547710567999999977
Q gi|254780351|r 47 FERQGRSDVNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL 97 (171)
Q Consensus 47 l~~~g~~~l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~ 97 (171)
T Consensus 130 l~~~~~~~LT~RE~eVL~lia~G-~snkeIA~~L~IS~~TVk~h~~~i~~K 179 (196)
T PRK10360 130 LASGRQDPLTKRERQVAEKLAQG-MAVKEIAAELGLSPKTVHVHRANLMEK 179 (196)
T ss_pred HHCCCCCCCCHHHHHHHHHHHCC-CCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 87167689997999999999879-999999999699999999999999998