HHsearch alignment for GI: 254780351 and conserved domain: PRK10632
>PRK10632 putative DNA-binding transcriptional regulator; Provisional.
Probab=97.27 E-value=0.0026 Score=41.20 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=53.0
Q ss_pred HHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999932179688999998547710567999999977---88788636100710564457889999999999999999999
Q gi|254780351|r 62 LLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESI 138 (171)
Q Consensus 62 ~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~~~l 138 (171)
T Consensus 9 ~F~~Vae~-gSfs~AA~~L~~s~saVSr~I~~LE~~LG~~Lf~Rt-------tR~l~LT~~G~~~~~~~~~il~~~~~~~ 80 (309)
T PRK10632 9 VFAKVVEF-GSFTAAARQLQMSVSSISQTVSKLEDELQVKLLNRS-------TRSIGLTEAGRIYYQGCRRMLHEVQDVH 80 (309)
T ss_pred HHHHHHHC-CCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEC-------CCCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999980-999999999795988999999999999799568978-------9971289899999999887767888999
Q ss_pred HH
Q ss_conf 85
Q gi|254780351|r 139 DK 140 (171)
Q Consensus 139 ~~ 140 (171)
T Consensus 81 ~~ 82 (309)
T PRK10632 81 EQ 82 (309)
T ss_pred HH
T ss_conf 99