HHsearch alignment for GI: 254780351 and conserved domain: PRK10837
>PRK10837 putative DNA-binding transcriptional regulator; Provisional.
Probab=97.00 E-value=0.0052 Score=39.26 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=55.7
Q ss_pred CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHH
Q ss_conf 9999999999932179688999998547710567999999977---8878863610071056445788999999999999
Q gi|254780351|r 55 VNAVQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLY 131 (171)
Q Consensus 55 l~~~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~ 131 (171)
T Consensus 3 m~L~~L~~F~~va~~g-sft~AA~~L~isQpavS~~I~~LE~~Lg~~Lf~R-------~~r~v~lT~~G~~l~~~a~~~l 74 (291)
T PRK10837 3 ITLRQLEVFAEVLKSG-STTQASVMLALSQSAVSAALTDLEGQLGVQLFDR-------VGKRLVVNEHGRLLYPRALALL 74 (291)
T ss_pred CCHHHHHHHHHHHHCC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEE-------CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8699999999999809-9999999988887899999999999969922898-------5996524685999999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780351|r 132 QRHIE 136 (171)
Q Consensus 132 ~~~~~ 136 (171)
T Consensus 75 ~~~~~ 79 (291)
T PRK10837 75 EQAVE 79 (291)
T ss_pred HHHHH
T ss_conf 99999