HHsearch alignment for GI: 254780351 and conserved domain: PRK10870
>PRK10870 transcriptional repressor MprA; Provisional.
Probab=99.88 E-value=5.3e-21 Score=154.97 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=119.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH---CCCCCHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 3079999999999999999999999999985025799999999999932---1796889999985477105679999999
Q gi|254780351|r 19 NDISGLYVECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIG---DLELTAGELRSRGYYLGSNVSYNLKKLI 95 (171)
Q Consensus 19 ~~~~~~~~e~~~lv~rl~r~l~~~~~~~l~~~g~~~l~~~q~~~L~~~~---~~~~t~~eLa~~l~i~~~tvs~~i~~Le 95 (171)
T Consensus 20 p~~p~~~~~l~rl~~~v~~~l~~~~n~~L~~~---GLs~~~f~vL~~L~~~~~~~l~PseLa~~l~~s~a~iTr~vD~LE 96 (176)
T PRK10870 20 EDFPYQEILLTRLCMHMQSKLLENRNKMLKAQ---GINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELE 96 (176)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 89980189999999999999999999899882---998889999999971899985989999997787101999999999
Q ss_pred HCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 7788788636100710564457889999999999999999999853499989999999999999999
Q gi|254780351|r 96 DLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRLNRF 162 (171)
Q Consensus 96 ~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~~~~l~~~~~ls~ee~~~l~~~L~rler~ 162 (171)
T Consensus 97 kkGlV~R~~s~~DRR~~~V~LT~~G~~ll~~~lP~~~~~~~~l--~s~Ls~eE~~qL~~LL~KLL~~ 161 (176)
T PRK10870 97 KRGWIERRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQL--WSALSTTEKDQLEQITRKLLTR 161 (176)
T ss_pred HCCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8899787237123534788989889999999849999999998--7289999999999999999981