HHsearch alignment for GI: 254780351 and conserved domain: PRK11074

>PRK11074 putative DNA-binding transcriptional regulator; Provisional.
Probab=97.19  E-value=0.0052  Score=39.24  Aligned_cols=72  Identities=13%  Similarity=0.148  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             9999999932179688999998547710567999999977---8878863610071056445788999999999999999
Q gi|254780351|r   58 VQALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRH  134 (171)
Q Consensus        58 ~q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~  134 (171)
T Consensus         5 ~~L~~F~aVa~~g-Sft~AA~~L~isqsaVS~~I~~LE~~LG~~Lf~R~-------~r~v~LT~aG~~ll~~a~~il~~~   76 (300)
T PRK11074          5 YSLEVVDAVARNG-SFSAAAQELHKVPSAVSYTVRQLEEWLAVPLFERR-------HRDVELTPAGEWFLKEARSVLKKM   76 (300)
T ss_pred             HHHHHHHHHHHCC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEC-------CCCEEECHHHHHHHHHHHHHHHHH
T ss_conf             9999999999709-99999999788878999999999999599639987-------996699962899999999999999


Q ss_pred             HHH
Q ss_conf             999
Q gi|254780351|r  135 IES  137 (171)
Q Consensus       135 ~~~  137 (171)
T Consensus        77 ~~~   79 (300)
T PRK11074         77 EET   79 (300)
T ss_pred             HHH
T ss_conf             999