HHsearch alignment for GI: 254780351 and conserved domain: PRK11151
>PRK11151 DNA-binding transcriptional regulator OxyR; Provisional.
Probab=96.96 E-value=0.014 Score=36.45 Aligned_cols=68 Identities=12% Similarity=0.135 Sum_probs=51.2
Q ss_pred HHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHC---CCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf 999999932179688999998547710567999999977---8878863610071056445788999999999999999
Q gi|254780351|r 59 QALLLFNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDL---GFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRH 134 (171)
Q Consensus 59 q~~~L~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~---G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~ 134 (171)
T Consensus 5 qL~~F~aVae~g-Sfs~AA~~L~isQpavS~~I~~LE~~LG~~LF~R~~-------r~v~LT~aG~~l~~~a~~il~~~ 75 (305)
T PRK11151 5 DLEYLVALAEHK-HFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTS-------RKVLFTQAGLLLVDQAKTVLREV 75 (305)
T ss_pred HHHHHHHHHHCC-CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECC-------CEEEECHHHHHHHHHHHHHHHHH
T ss_conf 999999999729-999999997898789999999999997986589859-------90468886999999999999999