HHsearch alignment for GI: 254780351 and conserved domain: PRK11337

Probab=96.18  E-value=0.052  Score=32.84  Aligned_cols=105  Identities=8%  Similarity=0.027  Sum_probs=64.9

Q ss_pred             CCCHHHHHHHHHH-HCC----CCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEC------CCC-CCEEEEEECHHHH
Q ss_conf             9999999999993-217----968899999854771056799999997788788636------100-7105644578899
Q gi|254780351|r   54 DVNAVQALLLFNI-GDL----ELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRS------RID-KRSIRISLTQSGK  121 (171)
Q Consensus        54 ~l~~~q~~~L~~~-~~~----~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~------~~D-~R~~~i~LT~~G~  121 (171)
T Consensus        26 ~Lt~sEk~IA~yIL~~~~~v~~~si~eLA~~~~vS~aTVvRf~kkLGf~Gf~efK~~l~~~~~~~~~~~~~~~~~~d~~~  105 (293)
T PRK11337         26 GMTENESRVVDWLLKPGNLSCATALKDVAEALAVSEAMIVKVAKLLGFSGFRNLRSALEDYFSQSEQVLPSELSFDDAPQ  105 (293)
T ss_pred             HCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf             44999999999998298999766699999895998889999999957897899999999998603233345478788899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             999999999999999998534999899999999999999
Q gi|254780351|r  122 EIAETISQLYQRHIESIDKVGGLSVDDFIAMNKLLQRLN  160 (171)
Q Consensus       122 ~~~~~~~~~~~~~~~~l~~~~~ls~ee~~~l~~~L~rle  160 (171)
T Consensus       106 ~i~~k~~~~~~~~l~~t--~~~ld~~~i~~av~li~~A~  142 (293)
T PRK11337        106 DVVNKVFNISLQTIMEG--QSIVNVDEIHRAARFFYQAR  142 (293)
T ss_pred             HHHHHHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHHCC
T ss_conf             99999999999999999--97269999999999998279