HHsearch alignment for GI: 254780351 and conserved domain: PRK13777
>PRK13777 transcriptional regulator Hpr; Provisional.
Probab=98.05 E-value=3.7e-05 Score=53.08 Aligned_cols=103 Identities=20% Similarity=0.263 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHC-CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf 9999999999999999998-50257999999999999321-796889999985477105679999999778878863610
Q gi|254780351|r 30 RLVERLHRSLLDVTRDEFE-RQGRSDVNAVQALLLFNIGD-LELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRI 107 (171)
Q Consensus 30 ~lv~rl~r~l~~~~~~~l~-~~g~~~l~~~q~~~L~~~~~-~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~ 107 (171)
T Consensus 18 ~k~aQLSKALWKsiEKDWQ~WIKP~dLNINEHHILwIay~L~gAsISdiAkfGVMHVSTaFNFSKkLEeRG~L~fsKk~~ 97 (190)
T PRK13777 18 QRIAQLSKALWKSVEKDWQQWIKPYDLNINEHHILWIAYHLKGASISEIAKFGVMHVSTAFNFSKKLEERGYLVFSKKED 97 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEHHHCCCCCHHHHHHHCCEEEEEHHHHHHHHHHCCCEECCCCCC
T ss_conf 99999999999999999998458456786411112201431688399998707246300320557777553453340024
Q ss_pred CCCEEEEEECHHHHHHHHHHHHHHH
Q ss_conf 0710564457889999999999999
Q gi|254780351|r 108 DKRSIRISLTQSGKEIAETISQLYQ 132 (171)
Q Consensus 108 D~R~~~i~LT~~G~~~~~~~~~~~~ 132 (171)
T Consensus 98 DKRNTYi~LT~~G~e~~l~~~~~y~ 122 (190)
T PRK13777 98 DKRNTYIELTDKGEELLLRLMEEYD 122 (190)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHCC
T ss_conf 6555358865016899999998519