HHsearch alignment for GI: 254780351 and conserved domain: pfam01325

>pfam01325 Fe_dep_repress Iron dependent repressor, N-terminal DNA binding domain. This family includes the Diphtheria toxin repressor. DNA binding is through a helix-turn-helix motif.

Probab=97.55  E-value=0.00018  Score=48.68  Aligned_cols=39  Identities=26%  Similarity=0.144  Sum_probs=35.1

Q ss_pred             HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf             217968899999854771056799999997788788636
Q gi|254780351|r   67 GDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRS  105 (171)
Q Consensus        67 ~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~  105 (171)
T Consensus        17 ~~~~v~~~~iA~~L~Vs~~SVt~mlkkL~~~GlV~~e~Y   55 (58)
T pfam01325        17 EKGVVKTKDLAERLNVSPSTVSEMLKKLEKDGYVVYEPY   55 (58)
T ss_pred             CCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECC
T ss_conf             699612999999959992529999999998899785326