HHsearch alignment for GI: 254780351 and conserved domain: pfam01638
>pfam01638 HxlR HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.
Probab=98.16 E-value=2.2e-05 Score=54.49 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=65.1
Q ss_pred HHHHHHHCCCCCHHHHHHHH-CCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHHH
Q ss_conf 99999321796889999985-477105679999999778878863610071056445788999999999999999
Q gi|254780351|r 61 LLLFNIGDLELTAGELRSRG-YYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRH 134 (171)
Q Consensus 61 ~~L~~~~~~~~t~~eLa~~l-~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~~~~~ 134 (171)
T Consensus 9 ~Il~~L~~g~~rF~el~~~l~gis~~vLs~rLk~L~~~gli~r~~~~~~p~~~eY~LT~~G~~l~pvl~~l~~W~ 83 (90)
T pfam01638 9 LILRELLDGPKRFSELKRALPGISQKMLTQRLRELEQDGIINREVYPEVPPKVEYSLTEKGRSLEPILQAMCDWG 83 (90)
T ss_pred HHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 999999749988999997765769899999999999889937645699999368743907878999999999999