HHsearch alignment for GI: 254780351 and conserved domain: pfam01726
>pfam01726 LexA_DNA_bind LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.
Probab=97.32 E-value=0.00063 Score=45.15 Aligned_cols=53 Identities=17% Similarity=0.076 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHH-----CC-CCCHHHHHHHHCC-CCCHHHHHHHHHHHCCCEEEEECC
Q ss_conf 99999999999932-----17-9688999998547-710567999999977887886361
Q gi|254780351|r 54 DVNAVQALLLFNIG-----DL-ELTAGELRSRGYY-LGSNVSYNLKKLIDLGFIKHQRSR 106 (171)
Q Consensus 54 ~l~~~q~~~L~~~~-----~~-~~t~~eLa~~l~i-~~~tvs~~i~~Le~~G~i~r~~~~ 106 (171)
T Consensus 3 ~LT~rQ~~il~~I~~~~~~~G~~Pt~rEI~~~~g~~S~s~v~~~l~~Le~kG~I~r~~~~ 62 (65)
T pfam01726 3 PLTERQREVLDFIKASIEETGYPPSRREIAQALGLRSPNAAEEHLKALERKGYIERDPGK 62 (65)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCCCC
T ss_conf 337999999999999999828898799999993899809999999999998396348999