HHsearch alignment for GI: 254780351 and conserved domain: pfam01978

>pfam01978 TrmB Sugar-specific transcriptional regulator TrmB. One member of this family, TrmB, has been shown to be a sugar-specific transcriptional regulator of the trehalose/maltose ABC transporter in Thermococcus litoralis.
Probab=97.42  E-value=0.00061  Score=45.26  Aligned_cols=54  Identities=17%  Similarity=0.127  Sum_probs=46.3

Q ss_pred             CCCCCHHHHHHH-HHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEC
Q ss_conf             579999999999-993217968899999854771056799999997788788636
Q gi|254780351|r   52 RSDVNAVQALLL-FNIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRS  105 (171)
Q Consensus        52 ~~~l~~~q~~~L-~~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~  105 (171)
T Consensus         3 ~~Gls~~E~~vY~~Ll~~g~~t~~eia~~~~i~r~~vY~~L~~L~~kGlv~~~~~   57 (68)
T pfam01978         3 KLGLSEYEAKVYLALLKLGPATADEIAEESGVPRSKVYEVLRSLEKKGLVEREKG   57 (68)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECC
T ss_conf             2398999999999999819988999999959889899999999998898898679