HHsearch alignment for GI: 254780351 and conserved domain: pfam04182
>pfam04182 B-block_TFIIIC B-block binding subunit of TFIIIC. Yeast transcription factor IIIC (TFIIIC) is a multi-subunit protein complex that interacts with two control elements of class III promoters called the A and B blocks. This family represents the subunit within TFIIIC involved in B-block binding.
Probab=96.63 E-value=0.0073 Score=38.32 Aligned_cols=53 Identities=32% Similarity=0.199 Sum_probs=45.0
Q ss_pred HHHHHHHHHHH---CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 99999999932---179688999998547710567999999977887886361007
Q gi|254780351|r 57 AVQALLLFNIG---DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDK 109 (171)
Q Consensus 57 ~~q~~~L~~~~---~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~ 109 (171)
T Consensus 2 ~~~~~lL~~Ia~~r~~Gi~q~dL~k~~~~D~rs~~~~~k~L~~~gLI~k~~~~~~~ 57 (73)
T pfam04182 2 ALQFELLEEIARSRYNGITQSDLAKLTGQDPRSVFYRLKKLEDKGLIVKQSIINTG 57 (73)
T ss_pred CHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEHHHHH
T ss_conf 24899999999517688018999999689964317989999878897855112010