HHsearch alignment for GI: 254780351 and conserved domain: pfam04967

>pfam04967 HTH_10 HTH DNA binding domain.

Probab=92.69  E-value=0.28  Score=28.17  Aligned_cols=28  Identities=18%  Similarity=0.071  Sum_probs=25.4

Q ss_pred             CCCHHHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf             9688999998547710567999999977
Q gi|254780351|r   70 ELTAGELRSRGYYLGSNVSYNLKKLIDL   97 (171)
Q Consensus        70 ~~t~~eLa~~l~i~~~tvs~~i~~Le~~   97 (171)
T Consensus        23 ~~~l~elA~~lgis~sT~~~hLr~ae~k   50 (53)
T pfam04967        23 RVTLKDLAKELGISKSTLSEHLRRAESK   50 (53)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             6889999999698999999999999998