HHsearch alignment for GI: 254780351 and conserved domain: pfam07848
>pfam07848 PaaX PaaX-like protein. This family contains proteins that are similar to the product of the paaX gene of Escherichia coli. This protein is involved in the regulation of expression of a group of proteins known to participate in the metabolism of phenylacetic acid. In fact, some members of this family are annotated by InterPro as containing a winged helix DNA-binding domain (Interpro:IPR009058).
Probab=92.48 E-value=0.16 Score=29.71 Aligned_cols=46 Identities=20% Similarity=0.186 Sum_probs=39.3
Q ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHH
Q ss_conf 8899999854771056799999997788788636100710564457889
Q gi|254780351|r 72 TAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSG 120 (171)
Q Consensus 72 t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G 120 (171)
T Consensus 25 sLi~ll~~~Gi~~~avRtAlsRl~~~GwL~~~r~G---r~s~Y~LT~~G 70 (70)
T pfam07848 25 SLIRLLAGFGISERLVRTALSRLVKAGWLVRERVG---RRSYYRLSDRG 70 (70)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECC---CCCEEEECCCC
T ss_conf 99999998399817899999999764864667518---82236648999