HHsearch alignment for GI: 254780351 and conserved domain: pfam08784

>pfam08784 RPA_C Replication protein A C terminal. This domain corresponds to the C terminal of the single stranded DNA binding protein RPA (replication protein A). RPA is involved in many DNA metabolic pathways including DNA replication, DNA repair, recombination, cell cycle and DNA damage checkpoints.
Probab=93.42  E-value=0.3  Score=27.95  Aligned_cols=54  Identities=15%  Similarity=0.060  Sum_probs=46.1

Q ss_pred             CCCHHHHHHHHHHHC-----CCCCHHHHHHHH-CCCCCHHHHHHHHHHHCCCEEEEECCC
Q ss_conf             999999999999321-----796889999985-477105679999999778878863610
Q gi|254780351|r   54 DVNAVQALLLFNIGD-----LELTAGELRSRG-YYLGSNVSYNLKKLIDLGFIKHQRSRI  107 (171)
Q Consensus        54 ~l~~~q~~~L~~~~~-----~~~t~~eLa~~l-~i~~~tvs~~i~~Le~~G~i~r~~~~~  107 (171)
T Consensus        44 ~ls~~~~~V~~~i~~~~~~~eG~h~~~l~~~l~~~~~~~i~~a~d~L~~eG~IYsTiDd~  103 (103)
T pfam08784        44 GLTPLQDQVLNLIKQSCPGEEGVHVDELAAQLNGLPVNDIRQAVDFLSNEGHIYSTIDDD  103 (103)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCC
T ss_conf             878999999999995488988727999999982999999999999998488066426899