HHsearch alignment for GI: 254780351 and conserved domain: pfam09339
>pfam09339 HTH_IclR IclR helix-turn-helix domain.
Probab=97.10 E-value=0.00095 Score=44.00 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=34.6
Q ss_pred HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEE
Q ss_conf 21796889999985477105679999999778878863
Q gi|254780351|r 67 GDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQR 104 (171)
Q Consensus 67 ~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~ 104 (171)
T Consensus 15 ~~~~~~l~eia~~~gl~kstv~RlL~tL~~~G~v~~dp 52 (52)
T pfam09339 15 APGGLSLTEIARRTGLPKSTAHRLLQTLVELGYVEQDP 52 (52)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89998999999998919999999999999881911692