HHsearch alignment for GI: 254780351 and conserved domain: pfam09397
>pfam09397 Ftsk_gamma Ftsk gamma domain. This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.
Probab=90.69 E-value=0.49 Score=26.56 Aligned_cols=49 Identities=10% Similarity=0.085 Sum_probs=40.1
Q ss_pred HHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEE
Q ss_conf 93217968899999854771056799999997788788636100710564
Q gi|254780351|r 65 NIGDLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRI 114 (171)
Q Consensus 65 ~~~~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i 114 (171)
T Consensus 16 V~~~~~~S~S~lQR~~~IGynRAariid~LE~~GiVsp~-~g~~~ReVL~ 64 (67)
T pfam09397 16 VIETQKASTSLLQRRLRIGYNRAARLIEQMEEEGIVGPA-NGSKPREVLV 64 (67)
T ss_pred HHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC-CCCCCCEECC
T ss_conf 998186348999999710506999999999998488887-7898850508