HHsearch alignment for GI: 254780351 and conserved domain: smart00347

>smart00347 HTH_MARR helix_turn_helix multiple antibiotic resistance protein.
Probab=99.75  E-value=1.8e-17  Score=132.26  Aligned_cols=96  Identities=26%  Similarity=0.344  Sum_probs=89.1

Q ss_pred             CCCCCHHHHHHHHHHHC-CCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
Q ss_conf             57999999999999321-79688999998547710567999999977887886361007105644578899999999999
Q gi|254780351|r   52 RSDVNAVQALLLFNIGD-LELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQL  130 (171)
Q Consensus        52 ~~~l~~~q~~~L~~~~~-~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~  130 (171)
T Consensus         5 ~~glt~~q~~vL~~l~~~~~~t~~~la~~l~~~~~~vs~~v~~L~~~glv~r~~~~~D~R~~~i~LT~~G~~~~~~~~~~   84 (101)
T smart00347        5 PLGLTPTQFLVLRILYEEGPLSVSELAKRLGVSPSTVTRVLDRLEKKGLIRRLPSPEDRRSVLVSLTEEGRELIEELLEA   84 (101)
T ss_pred             HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf             13949999999999997699799999999896887999999999458938982189998858989998999999999999


Q ss_pred             HHHHHHHHHHHCCCCHHHH
Q ss_conf             9999999985349998999
Q gi|254780351|r  131 YQRHIESIDKVGGLSVDDF  149 (171)
Q Consensus       131 ~~~~~~~l~~~~~ls~ee~  149 (171)
T Consensus        85 ~~~~~~~~--~~~ls~eEr  101 (101)
T smart00347       85 RHETLAEL--LAGLTAEEQ  101 (101)
T ss_pred             HHHHHHHH--HHCCCHHHC
T ss_conf             99999999--848897669