HHsearch alignment for GI: 254780351 and conserved domain: smart00420

>smart00420 HTH_DEOR helix_turn_helix, Deoxyribose operon repressor.

Probab=95.73  E-value=0.028  Score=34.58  Aligned_cols=46  Identities=15%  Similarity=0.132  Sum_probs=38.6

Q ss_pred             HHHHHHH-CCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECC
Q ss_conf             9999932-179688999998547710567999999977887886361
Q gi|254780351|r   61 LLLFNIG-DLELTAGELRSRGYYLGSNVSYNLKKLIDLGFIKHQRSR  106 (171)
Q Consensus        61 ~~L~~~~-~~~~t~~eLa~~l~i~~~tvs~~i~~Le~~G~i~r~~~~  106 (171)
T Consensus         4 ~Il~~l~~~~~~~i~~La~~~~VS~~TiRRDl~~L~~~g~i~r~hGG   50 (53)
T smart00420        4 QILELLAQQGKVSVEELAELLGVSEMTIRRDLNKLEEQGLLTRVHGG   50 (53)
T ss_pred             HHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf             99999998697979999999897999999969999988998997798