RPSBLAST alignment of GI: 254780351 and protein with PDBid: 1lj9
>1lj9_A Transcriptional regulator SLYA; HTH DNA binding protein, structural genomics, PSI, protein structure initiative; 1.60A {Enterococcus faecalis} SCOP: a.4.5.28 Length = 144
Score = 64.9 bits (158), Expect = 9e-12
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 27 ECLRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDLE-LTAGELRSRGYYLGS 85
+ LR + + R+L ++ EF+ + Q L L + + + ++ +
Sbjct: 2 DILREIGMIARALDSISNIEFKELS---LTRGQYLYLVRVCENPGIIQEKIAELIKVDRT 58
Query: 86 NVSYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLS 145
+ +K+L + GFI Q +K+ RI T+ GK + I + Q + + GLS
Sbjct: 59 TAARAIKRLEEQGFIYRQEDASNKKIKRIYATEKGKNVYPIIVRENQHSNQVA--LQGLS 116
Query: 146 VDDFIAMNKLLQRLNR 161
+ + L R+ +
Sbjct: 117 EVEISQLADYLVRMRK 132