RPSBLAST alignment of GI: 254780351 and protein with PDBid: 2nnn

>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} Length = 140

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 20/131 (15%), Positives = 46/131 (35%), Gaps = 7/131 (5%)

Query: 30  RLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDL-ELTAGELRSRGYYLGSNVS 88
            ++ + ++         F     + +   Q   L  +G+       +L        + + 
Sbjct: 15  FILRQANQRY----AALFANGIGNGLTPTQWAALVRLGETGPCPQNQLGRLTAMDAATIK 70

Query: 89  YNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVDD 148
             +++L   G I+      D R + +SL+ +G+   E      +        +  LS+ +
Sbjct: 71  GVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAELEAGLAAAREINRQA--LAPLSLQE 128

Query: 149 FIAMNKLLQRL 159
              +  LL RL
Sbjct: 129 QETLRGLLARL 139