RPSBLAST alignment of GI: 254780351 and protein with PDBid: 3bpv
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A* Length = 138
Score = 61.1 bits (148), Expect = 1e-10
Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 29 LRLVERLHRSLLDVTRDEFERQGRSDVNAVQALLLFNIGDLE-LTAGELRSRGYYLGSNV 87
L ++ R HR + G ++ Q L I + EL + + +
Sbjct: 7 LSIILRSHRVFIG------RELGHLNLTDAQVACLLRIHREPGIKQDELATFFHVDKGTI 60
Query: 88 SYNLKKLIDLGFIKHQRSRIDKRSIRISLTQSGKEIAETISQLYQRHIESIDKVGGLSVD 147
+ L++L + GFI+ ++ ++R + +T+ G+EI I ++ +R + + + D
Sbjct: 61 ARTLRRLEESGFIEREQDPENRRRYILEVTRRGEEIIPLILKVEERWEDLL--FRDFTED 118
Query: 148 DFIAMNKLLQRLN 160
+ K+ +RL
Sbjct: 119 ERKLFRKMCRRLA 131