HHsearch alignment for GI: 254780353 and conserved domain: PRK05560

>PRK05560 DNA gyrase subunit A; Validated.
Probab=99.92  E-value=6e-23  Score=192.08  Aligned_cols=186  Identities=22%  Similarity=0.307  Sum_probs=155.0

Q ss_pred             CCCCEEEEECCCEEECCCCCCC------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCC-C-CCCCC
Q ss_conf             6670599871010202565544------55322345555540121111478178980688278755112121-2-34444
Q gi|254780353|r  517 KEPITVVISNRGWIRSLKSHSV------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLS-G-RGHGE  588 (753)
Q Consensus       517 ~E~v~V~LS~~GyIKr~k~~~~------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips-~-~~kG~  588 (753)
T Consensus       608 ~~~~Lv~~Tk~G~IKRt~L~df~~~r~~G~~AikLke~DeLv~v~l~~~~~dIil~T~~G~alRF~~~eVR~~GR~a~GV  687 (822)
T PRK05560        608 DDLYLFFATKNGTVKKTALSEFSNIRSNGLIAINLDEGDELIGVRLTDGDDDVLLFSANGKAIRFPEEDVRPMGRTARGV  687 (822)
T ss_pred             CCCEEEEEECCCCEEEECHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCC
T ss_conf             88569999579727971368722555255199985899779999984899879999789739995066577778877684


Q ss_pred             CCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEEEHHHHHCCCCCC--EEEEEECC-CCCEEEEEECCC-CEEEEE
Q ss_conf             22223576765307899985799859999748978996388740233356--27885368-980568896189-809999
Q gi|254780353|r  589 AIQLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTRKG--KTFLKVSS-EEKMKLVVKVTG-DHVAVV  664 (753)
Q Consensus       589 pI~~ll~l~~~EkIv~~~~~~~~~~lll~Tk~G~ikr~~l~~~~~~~k~G--k~~ikLk~-~D~li~v~~~~~-d~iili  664 (753)
T Consensus       688 kg---IkL~~gD~VV~~~vv~~~~~iL~vTe~G~GKRt~~~eyr~~~RGgkGv~~ik~~~k~G~lv~~~~V~~~deI~li  764 (822)
T PRK05560        688 RG---IKLREGDEVVSMSVLRDEQFVLTVTENGYGKRTPAEEYRLQGRGGKGVIAIKITERNGKLVGAVPVDDDDEIMLI  764 (822)
T ss_pred             CC---EECCCCCEEEEEEEECCCCEEEEEECCCEEEECCHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCEEEEE
T ss_conf             31---551999989999985799879999189805305288837557787775889964888848999991799869999


Q ss_pred             ECCCCEEEEEHHHCCCCCH-HHCCEEEECCCCCEE-EEEEEEC
Q ss_conf             5699389955787783361-214133421878756-8999733
Q gi|254780353|r  665 GENRKLLIFSIDQIPEMSR-GKGVRLQSYKDGGIS-DVICFKI  705 (753)
Q Consensus       665 T~~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~~~-~~~~~~~  705 (753)
T Consensus       765 T~~G~~iRi~v~~I~~~gR~t~GVrl~~L~~~d~v~~va~v~~  807 (822)
T PRK05560        765 TDAGKLIRTRVSEIRITGRNTQGVTLIRLDEGEKVVSVARVAE  807 (822)
T ss_pred             ECCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECC
T ss_conf             2798799987100475675788708998599998999998078