HHsearch alignment for GI: 254780353 and conserved domain: PRK09630

>PRK09630 DNA topoisomerase IV subunit A; Provisional.
Probab=97.45  E-value=0.0078  Score=40.84  Aligned_cols=106  Identities=11%  Similarity=-0.004  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHCCCCCCCCC-CCCCCCCHH----
Q ss_conf             99998999989999999999999999999999999986410-------789999752000011000-000257757----
Q gi|254780353|r  359 GILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLN-------IDEIIAIIRNEDKPKPVM-VSRFSLTEN----  426 (753)
Q Consensus       359 eil~~f~~~R~~vi~rr~~~~L~k~~~RlhIleGl~~a~~~-------ID~vI~iIR~s~~~k~~L-~~~f~lse~----  426 (753)
T Consensus       307 l~l~eiL~~~~~~~~~~lrr~l~~~~~~~~r~~-~~k~Le~l~I~~~~~d~I~eiI~~i~~~~~~ed~~~~l~~~~~~~~  385 (479)
T PRK09630        307 TSISEILKLHTEALQGYLKKELLILQDSLTREH-YHKTLEYIFIKHKLYDTVREMLSKRKTKPSASDLHNAVLHALEPFL  385 (479)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             668999999999875543466899989999999-9988889999877899999999988538989999999998765667


Q ss_pred             --HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q ss_conf             --788998878999988999976-667899998877654420
Q gi|254780353|r  427 --QVDAILNLRLRSLRKLEEYQI-KSELDNLLAEKEKIDSLL  465 (753)
Q Consensus       427 --QA~aIL~mrL~rLt~le~~kl-~~E~~eL~~~i~~L~~IL  465 (753)
T Consensus       386 ~~~~~~i~~q~~~~L~~l~l~kL~~Le~~k~~~El~~l~~~i  427 (479)
T PRK09630        386 HTLPTAPDKQATSQLASLTIKKILCFNENAYTKELAAIEKKQ  427 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             877543389999999998999875133999999999999999