HHsearch results for GI: 254780353 and protein with PDBid: 1wp5_A
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=99.87 E-value=4.6e-20 Score=168.76 Aligned_cols=174 Identities=14% Similarity=0.208 Sum_probs=80.7
Q ss_pred CCEEEEECCCEEECCCCCCC-------CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCC--CCCCCC
Q ss_conf 70599871010202565544-------553223455555401211114781789806882787551121212--344442
Q gi|254780353|r 519 PITVVISNRGWIRSLKSHSV-------DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSG--RGHGEA 589 (753)
Q Consensus 519 ~v~V~LS~~GyIKr~k~~~~-------~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~--~~kG~p 589 (753)
.-.+++|++|++|+.+...+ +...++++++|.+..+..++..+.+++.|+.|++...+..++|.. +++|.
T Consensus 107 ~~ll~~Tk~G~iKr~~l~e~~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~t~~G~~lrf~~~~vr~~gr~a~GV- 185 (323)
T 1wp5_A 107 GYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGV- 185 (323)
T ss_dssp CEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCE-
T ss_pred CEEEEEECCCCEEEEEHHHHCCCCCCCHHEEEECCCCCCCCCEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCC-
T ss_conf 4699998888233865566101123330002433665555516843898489974049828970345423468765673-
Q ss_pred CCCCCCCCCCCEEEEEEEE-CCCCEEEEEECCCCEEEEEHHHHHCCCCCCE--EEEEECC--CCCEEEEEECCC-CEEEE
Q ss_conf 2223576765307899985-7998599997489789963887402333562--7885368--980568896189-80999
Q gi|254780353|r 590 IQLLIDLNHNQDIVTAFVY-DSTCKLLVVSSKGNAFIVEESEIIANTRKGK--TFLKVSS--EEKMKLVVKVTG-DHVAV 663 (753)
Q Consensus 590 I~~ll~l~~~EkIv~~~~~-~~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk--~~ikLk~--~D~li~v~~~~~-d~iil 663 (753)
..+.|.++++|+++... +++.+++++|++|++||+++++|...+|.|+ .++++.+ ++.+..+..+++ |++++
T Consensus 186 --k~i~L~~~D~vv~~~~v~~~~~~ll~iT~~G~gKr~~~~e~~~~~Rg~kGv~~~k~~k~~~~~v~~~~v~~~~d~i~i 263 (323)
T 1wp5_A 186 --KGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDTIYL 263 (323)
T ss_dssp --ECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCEEEE
T ss_pred --CCCCCCCCCEEEEEEEEEECCCEEEEEECCCCEEECCHHHHHHCCCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEE
T ss_conf --020247898899999996057269998508814751145633115578870610133567824889997689988999
Q ss_pred EECCCCEEEEEHHHCCCCCH-HHCCEEEECCCC
Q ss_conf 95699389955787783361-214133421878
Q gi|254780353|r 664 VGENRKLLIFSIDQIPEMSR-GKGVRLQSYKDG 695 (753)
Q Consensus 664 iT~~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~ 695 (753)
+|+.|+++||++++||.+|| ++||++|+|+++
T Consensus 264 ~T~~g~~~r~~~~~i~~~gR~~~Gv~li~l~~~ 296 (323)
T 1wp5_A 264 QTEKSFIETIKVGDIRFSDRYSNGSFVLDEEEN 296 (323)
T ss_dssp EETTSCEEEEEGGGSCBCCSSSCCEESSCHHHH
T ss_pred EECCCEEEEEECCCCCCCCCCCCCEEEEECCCC
T ss_conf 959988999870026767886888797988999