HHsearch results for GI: 254780353 and protein with PDBid: 1zi0_A
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.4e-45 Score=361.57 Aligned_cols=236 Identities=20% Similarity=0.251 Sum_probs=214.5
Q ss_pred CCCCEEEEECCCEEECC--------CCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEHHHCCCC--CCC
Q ss_conf 66705998710102025--------65544553223455555401211114781789806882787551121212--344
Q gi|254780353|r 517 KEPITVVISNRGWIRSL--------KSHSVDLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNLLSG--RGH 586 (753)
Q Consensus 517 ~E~v~V~LS~~GyIKr~--------k~~~~~~~~~~~KegD~l~~~~~~~t~d~LLffTs~GkvY~l~a~~Ips~--~~k 586 (753)
+|+|+|++|++|||||+ ++++.+.++.++|++|++.+++.|+|||+|+||||.|++|++++|+||.. +++
T Consensus 2 eEdv~V~ls~~GyiKR~~~~~y~~q~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fTn~G~~~~~~v~eIp~~~~~~~ 81 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGAR 81 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSC
T ss_pred CCCEEEEEECCCEEEEEEHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCC
T ss_conf 76799999689868874289975214689983345037895589999971898799992797599999202742123467
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEC---CCCEEEEEECCCCEEEEEHHHHHCCCCCCEEEEEECCCCCEEEEEECCC-CEEE
Q ss_conf 44222235767653078999857---9985999974897899638874023335627885368980568896189-8099
Q gi|254780353|r 587 GEAIQLLIDLNHNQDIVTAFVYD---STCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG-DHVA 662 (753)
Q Consensus 587 G~pI~~ll~l~~~EkIv~~~~~~---~~~~lll~Tk~G~ikr~~l~~~~~~~k~Gk~~ikLk~~D~li~v~~~~~-d~ii 662 (753)
|.||.+++++.++|+|+++++.+ ++.+++++|++|++||+++++|...+++|+.+++|+++|+|++|..+.+ ++++
T Consensus 82 G~~i~~ll~l~~~E~i~~~~~~~~~~~~~~l~~~T~~G~iKr~~l~~f~~~r~~g~~ai~L~~~Delv~v~~~~~~~~v~ 161 (307)
T 1zi0_A 82 GRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVM 161 (307)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEE
T ss_pred CCCHHEEECCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCEEE
T ss_conf 82855040688885489998123356674499996787178730310257673570877558999999999947997399
Q ss_pred EEECCCCEEEEEHHHCCCCCH-HHCCEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCC
Q ss_conf 995699389955787783361-2141334218787568999733888369994177566451143225444136660275
Q gi|254780353|r 663 VVGENRKLLIFSIDQIPEMSR-GKGVRLQSYKDGGISDVICFKICEGLTWIDSAGRSYNRSENDLLGWLGKRGGVGSLVP 741 (753)
Q Consensus 663 liT~~Gk~LrF~~~eIr~~gR-gkGVk~i~Lkd~~~~~~~~~~~~e~~~il~~t~~g~~k~~~~~~~~~~~RggkG~~~~ 741 (753)
++|++|+++||++++||++|| ++||++|+|++++.+..+. ..+++..++..+++|++|+++..+|+.++||++|++++
T Consensus 162 l~T~~G~~lrf~~~~v~~~gr~a~GV~gi~L~~~d~vv~~~-~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~~Gv~~~ 240 (307)
T 1zi0_A 162 LFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLI-VPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISI 240 (307)
T ss_dssp EEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEE-CCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCEESS
T ss_pred EEECCCEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEE-ECCCCCEEEEEECCCEEEEECCCEEEEECCCCCCCEEE
T ss_conf 99838748986033000378888776705708999999998-61387169987448605994021431204565571422
Q ss_pred CCCCCCCCEECC
Q ss_conf 526776861049
Q gi|254780353|r 742 KGFPRSGKFLSS 753 (753)
Q Consensus 742 k~~~K~gklV~A 753 (753)
+..++++.+|++
T Consensus 241 k~~~~~~~~v~~ 252 (307)
T 1zi0_A 241 KVTERNGLVVGA 252 (307)
T ss_dssp CCCTTTCSEEEE
T ss_pred ECCCCCCCEEEE
T ss_conf 025667738999