PSIBLAST alignment of GI: 254780353 and protein with PDB id: 1wp5

>gi|56554393|pdb|1WP5|A Chain A, Crystal Structure Of The C-Terminal Domain Of Dna Topoisomerase Iv Length = 323

 Score =  144 bits (363), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 87/243 (35%), Gaps = 11/243 (4%)

Query: 516 EKEPITVVISNRGWIRSLKSHSV---DLSALHFKEGDSLKIALHAHTTDRILLLSTDGKA 572
             E + V ++  G+++     S    +      K+ D L   L  +T D +LL +  G  
Sbjct: 3   ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAXKDTDRLLAXLEXNTKDVLLLFTNKGNY 62

Query: 573 YTLPAGNLLSGRGHG--EAIQLLIDLNHNQDIVTAFVYDS---TCKLLVVSSKGNAFIVE 627
              P   L   R     + I  +I ++ +++I+ A   +        L V+  G     E
Sbjct: 63  LYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGXVKKTE 122

Query: 628 ESEIIANT-RKGKTFLKVSSEEKMKLVVKVTG-DHVAVVGENRKLLIFSIDQIPEMS-RG 684
                A    K  T + + +++++  V    G + + +V  N   L F   ++  +  R 
Sbjct: 123 LKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGXNELFLVTHNGYALWFDESEVSIVGVRA 182

Query: 685 KGVRLQSYKDGGISDVICFKICEGLTWIDSAGRSYNRSENDLLGWLGKRGGVGSLVPKGF 744
            GV+  + K+G           +  + + +  R   +           R   G ++ +  
Sbjct: 183 AGVKGXNLKEGDYIVSGQLITSKDESIVVATQRGAVKKXKLTEFEKATRAKRGVVILREL 242

Query: 745 PRS 747
             +
Sbjct: 243 KAN 245