PSIBLAST alignment of GI: 254780353 and protein with PDB id: 3l4j
>gi|297039743|pdb|3L4J|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Apo Length = 722
>gi|297039748|pdb|3L4K|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Metal-Bound Length = 722
Score = 198 bits (502), Expect = 4e-48, Method: Composition-based stats.
Identities = 91/474 (19%), Positives = 176/474 (37%), Gaps = 54/474 (11%)
Query: 8 NSNTLVEENVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLD 67
T+++ +K + + + + + ++L+ R+IP++ DGFKP R++++ + L
Sbjct: 238 EPGTVLDPTLKEIPISDFINKELILFSLADNI-RSIPNVLDGFKPGQRKVLYGCFKKNLK 296
Query: 68 FGAAFKKSARIVGEVIG--KLHPHGDQSVYDSLVRLAQPF--VQRYPLISGQGNFGNI-- 121
K A++ V H HG+QS+ +++ LAQ F L+ G FG
Sbjct: 297 SE---LKVAQLAPYVSECTAYH-HGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRAT 352
Query: 122 DGDSAAAYR-YTEARMTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGT 180
G AAA R Y + ++ I D+ + +E+ EP + P +L NG
Sbjct: 353 GGKDAAAARXYIYTELNKLTRKIFHPADDPLYKYI-QEDEKTVEPEWYLPILPMILVNGA 411
Query: 181 SGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIV 240
GI G +T IP N EI + L+++ E +E++ + G + E I
Sbjct: 412 EGIGTGWSTYIPPFNPLEIIKNIRHLMNDEE--LEQMHPWFRG--------WTGTIEEIE 461
Query: 241 ESYRLGRGGFRVRARWCVEEVGRGSWCIVVTEIPYQVQKSRLIEK--IAELIIAKRIPLL 298
+R+ R G + +TE+P + S + E + K P +
Sbjct: 462 PL------RYRMYGRIE----QIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWI 511
Query: 299 EDIRDESAEDVRIVLFPKNRSLDPDLLMESIFMLSDMETRFPLNMNVLS--MGRVPQVMP 356
+D+ ++ D + + + + + L V G++ +
Sbjct: 512 KDMEEQHD-DNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNS 570
Query: 357 LDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIAYLNIDE-------------I 403
++ IL E+ R E +R + + VE + I E I
Sbjct: 571 VNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAII 630
Query: 404 IAIIRNEDKPKPVMVSRFSLTEN---QVDAILNLRLRSLRKLEEYQIKSELDNL 454
+ + +E + +L +R+ SL K ++ +
Sbjct: 631 QELENLGFPRFNKEGKPYYGSEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEK 684