PSIBLAST alignment of GI: 254780353 and protein with PDB id: 3nuh

>gi|302566244|pdb|3NUH|A Chain A, A Domain Insertion In E. Coli Gyrb Adopts A Novel Fold That Plays A Critical Role In Gyrase Function Length = 525

 Score =  465 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 213/522 (40%), Positives = 301/522 (57%), Gaps = 45/522 (8%)

Query: 16  NVKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKS 75
            +  V++   L+  YL YA S I  RA+PD+RDG KPVHRR+++A + +G D+  A+KKS
Sbjct: 7   EITPVNIEEELKSSYLDYAXSVIVGRALPDVRDGLKPVHRRVLYAXNVLGNDWNKAYKKS 66

Query: 76  ARIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEAR 135
           AR+VG+VIGK HPHGD +VYD++VR AQPF  RY L+ GQGNFG+IDGDSAAA RYTE R
Sbjct: 67  ARVVGDVIGKYHPHGDSAVYDTIVRXAQPFSLRYXLVDGQGNFGSIDGDSAAAXRYTEIR 126

Query: 136 MTQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHN 195
           + ++A  +   ++++ VDF D Y+  +  P V P+K PNLL NG+SGIAVG AT+IP HN
Sbjct: 127 LAKIAHELXADLEKETVDFVDNYDGTEKIPDVXPTKIPNLLVNGSSGIAVGXATNIPPHN 186

Query: 196 VQEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRAR 255
           + E+    LA ID+ +ISIE L E+I GPDFPT   I+  R  I E+YR GRG   +RAR
Sbjct: 187 LTEVINGCLAYIDDEDISIEGLXEHIPGPDFPTAA-IINGRRGIEEAYRTGRGKVYIRAR 245

Query: 256 WCVE-EVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAEDVRIVLF 314
             VE +   G   I+V EIPYQV K+RLIEKIAEL+  KR+  +  +RDES +D   ++ 
Sbjct: 246 AEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGXRIVI 305

Query: 315 PKNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFR 374
              R    ++++ +++  + ++  F +N   L     P++  L  I+  ++ HRREV+ R
Sbjct: 306 EVKRDAVGEVVLNNLYSQTQLQVSFGINXVAL-HHGQPKIXNLKDIIAAFVRHRREVVTR 364

Query: 375 RSSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIRNEDKPKP------------------- 415
           R+ F ++    R  IL+ L +A  NID II +IR+   P                     
Sbjct: 365 RTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAXL 424

Query: 416 ------------------VMVSRFSLTENQVDAILNLRLRSLRKLEEYQIKSELDNLLAE 457
                             V    + LTE Q  AIL+LRL+ L  LE  ++  E   LL +
Sbjct: 425 ERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQ 484

Query: 458 KEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDLGRRRTTF 499
             ++  +L S  +    I  E+  V+E F       +RRT  
Sbjct: 485 IAELLRILGSADRLXEVIREELELVREQFGD-----KRRTEI 521