RPSBLAST alignment for GI: 254780353 and conserved domain: smart00434

>gnl|CDD|128711 smart00434, TOP4c, DNA Topoisomerase IV. Bacterial DNA topoisomerase IV, GyrA, ParC. Length = 445
 Score =  513 bits (1323), Expect = e-146
 Identities = 208/462 (45%), Positives = 292/462 (63%), Gaps = 26/462 (5%)

Query: 20  VSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIV 79
           + +   + + YL Y++S I  RAIPD+RDG KPV RRI++AM + GL       KSAR V
Sbjct: 1   IDIEDFINKEYLDYSMSVINGRAIPDVRDGLKPVQRRILYAMFKRGLTPDEPKVKSARGV 60

Query: 80  GEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNI-DGDSAAAYRYTEARMTQ 138
           G+V+GK HPHGD S+YD++VR+AQ F   YPL+ GQGNFG+  DGD AAA RYTE R++ 
Sbjct: 61  GDVMGKYHPHGDSSLYDAIVRMAQDFSNNYPLLDGQGNFGSRLDGDDAAAMRYTETRLSP 120

Query: 139 VAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNVQE 198
           +A  +L  +D+D VDF   Y+ ++ EP V P   PNLL NG+SGIAVGMAT+IP HN++E
Sbjct: 121 LARELLPDIDKDTVDFVPNYDGQEIEPTVLPPIIPNLLVNGSSGIAVGMATNIPPHNLRE 180

Query: 199 ICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARWCV 258
           + +A   LIDNPE SI++L+    GPDFPTGG I+            G G + VR +  +
Sbjct: 181 VIDAVRRLIDNPEASIDELMMIPWGPDFPTGGEII------------GPGSYVVRGKIEI 228

Query: 259 EEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDES--AEDVRIVLFPK 316
           E+   G   IV+TE+PYQV K++LIEKIAEL+  K+I  + D+RDES     VRIV+  K
Sbjct: 229 ED---GRNTIVITELPYQVNKAKLIEKIAELVKDKKIEGIIDVRDESHDRTGVRIVIELK 285

Query: 317 NRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRS 376
            R    ++++  ++ L+ +++ F +NM  L     P+   L  ILKE+L HR EV  RR 
Sbjct: 286 -RGAMAEVVLNGLYKLTKLQSTFSINMLALFDNGKPKKYNLKEILKEFLDHRLEVYTRRK 344

Query: 377 SFRMQAIDR-RVEILKGLLIAYLNIDEIIAIIRNEDKP----KPVMVSRFSLTENQVDAI 431
            + +  ++  R+ IL+GL IA   IDEII +IR+        K +++ RF L+E Q DAI
Sbjct: 345 EYLLGKLEAERLHILEGLFIALSIIDEIIVLIRSSKDLAKEAKELLMERFELSEEQADAI 404

Query: 432 LNLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWN 473
           L++RLR L KLE  +++ EL  L  E E ++ +L    + W 
Sbjct: 405 LDMRLRRLTKLEVEKLEKELKELEKEIEDLEKIL--ASELWL 444