RPSBLAST alignment for GI: 254780353 and conserved domain: TIGR01063
>gnl|CDD|162183 TIGR01063, gyrA, DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV. Length = 800
Score = 598 bits (1545), Expect = e-171
Identities = 283/698 (40%), Positives = 419/698 (60%), Gaps = 34/698 (4%)
Query: 17 VKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSA 76
+ V++ ++ YL YA+S I RA+PD+RDG KPVHRRI++AM E+GL +KKSA
Sbjct: 1 IVPVNIEEEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSA 60
Query: 77 RIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARM 136
RIVG+V+GK HPHGD ++YD+LVR+AQ F RYPL+ GQGNFG+IDGD AA RYTEAR+
Sbjct: 61 RIVGDVMGKYHPHGDSAIYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDPPAAMRYTEARL 120
Query: 137 TQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNV 196
T++AE +L+ +D++ VDF Y+ + EP V PS+FPNLL NG+SGIAVGMAT+IP HN+
Sbjct: 121 TKIAEELLRDIDKETVDFVPNYDGSEQEPTVLPSRFPNLLVNGSSGIAVGMATNIPPHNL 180
Query: 197 QEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARW 256
EI +A LA IDNP+ISI++LLE I GPDFPTGGII+ R I +Y GRG +RAR
Sbjct: 181 GEIIDALLAYIDNPDISIQELLEVIKGPDFPTGGIIL-GRSGIRSAYETGRGSIVIRARA 239
Query: 257 CVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAED-VRIVLFP 315
+EE +G I+VTEIPYQV K+RLIEKIAEL+ K+I + DIRDES + +RIV+
Sbjct: 240 EIEEDSKGREAIIVTEIPYQVNKARLIEKIAELVREKKIEGISDIRDESDREGIRIVIEL 299
Query: 316 KNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRR 375
K R ++++ +++ + ++ F +NM L G P+V+ L +L+ ++ HR++V+ RR
Sbjct: 300 K-RDAVAEVVLNNLYKQTQLQVSFGINMLALVKGL-PKVLNLKELLEAFVEHRKDVITRR 357
Query: 376 SSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIR---NEDKPKPVMVSRFSLTENQVDAIL 432
+ F ++ + R IL+GLLIA NIDE+IA+IR N ++ K +V RFSL+E Q AIL
Sbjct: 358 TIFELRKAEERAHILEGLLIALDNIDEVIALIRASQNTEEAKTRLVERFSLSEIQAQAIL 417
Query: 433 NLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDL 492
++RL+ L LE +++ E LL ++ +L S ++ I E+ E+KE F
Sbjct: 418 DMRLQRLTGLEREKLQEEYKELLELIADLEDILASEERVLEIIREELEEIKEQFGDP--- 474
Query: 493 GRRRTTFCEVSRADKATLQQAMIEKEPITVVISNRGWI--------RSLKSHSVDLSALH 544
RRT V + + +I +E + V +S+ G++ R K +S
Sbjct: 475 --RRTEI--VYDESEDIDIEDLIARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGAD 530
Query: 545 FKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNL-LSGRG-HGEAIQLLIDLNHNQDI 602
K+ D ++ L A T D +L + GK Y L + + R G+ I L+ L ++ I
Sbjct: 531 MKDDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEASRTAKGKPIVNLLPLQPDERI 590
Query: 603 VTAFV----YDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG 658
TA + +D L + G +E G +K+ +++ V +G
Sbjct: 591 -TAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDDGDELISVRLTSG 649
Query: 659 -DHVAVVGENRKLLIFSIDQIPEMSRG----KGVRLQS 691
D V + +N K + F + + M R +G++L++
Sbjct: 650 DDEVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKLKN 687