RPSBLAST alignment for GI: 254780353 and conserved domain: TIGR01063

>gnl|CDD|162183 TIGR01063, gyrA, DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV. Length = 800
 Score =  598 bits (1545), Expect = e-171
 Identities = 283/698 (40%), Positives = 419/698 (60%), Gaps = 34/698 (4%)

Query: 17  VKAVSLRFALEERYLAYALSTIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSA 76
           +  V++   ++  YL YA+S I  RA+PD+RDG KPVHRRI++AM E+GL     +KKSA
Sbjct: 1   IVPVNIEEEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSA 60

Query: 77  RIVGEVIGKLHPHGDQSVYDSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARM 136
           RIVG+V+GK HPHGD ++YD+LVR+AQ F  RYPL+ GQGNFG+IDGD  AA RYTEAR+
Sbjct: 61  RIVGDVMGKYHPHGDSAIYDTLVRMAQDFSLRYPLVDGQGNFGSIDGDPPAAMRYTEARL 120

Query: 137 TQVAELILQGVDEDAVDFRDTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNV 196
           T++AE +L+ +D++ VDF   Y+  + EP V PS+FPNLL NG+SGIAVGMAT+IP HN+
Sbjct: 121 TKIAEELLRDIDKETVDFVPNYDGSEQEPTVLPSRFPNLLVNGSSGIAVGMATNIPPHNL 180

Query: 197 QEICEAALALIDNPEISIEKLLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARW 256
            EI +A LA IDNP+ISI++LLE I GPDFPTGGII+  R  I  +Y  GRG   +RAR 
Sbjct: 181 GEIIDALLAYIDNPDISIQELLEVIKGPDFPTGGIIL-GRSGIRSAYETGRGSIVIRARA 239

Query: 257 CVEEVGRGSWCIVVTEIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESAED-VRIVLFP 315
            +EE  +G   I+VTEIPYQV K+RLIEKIAEL+  K+I  + DIRDES  + +RIV+  
Sbjct: 240 EIEEDSKGREAIIVTEIPYQVNKARLIEKIAELVREKKIEGISDIRDESDREGIRIVIEL 299

Query: 316 KNRSLDPDLLMESIFMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRR 375
           K R    ++++ +++  + ++  F +NM  L  G  P+V+ L  +L+ ++ HR++V+ RR
Sbjct: 300 K-RDAVAEVVLNNLYKQTQLQVSFGINMLALVKGL-PKVLNLKELLEAFVEHRKDVITRR 357

Query: 376 SSFRMQAIDRRVEILKGLLIAYLNIDEIIAIIR---NEDKPKPVMVSRFSLTENQVDAIL 432
           + F ++  + R  IL+GLLIA  NIDE+IA+IR   N ++ K  +V RFSL+E Q  AIL
Sbjct: 358 TIFELRKAEERAHILEGLLIALDNIDEVIALIRASQNTEEAKTRLVERFSLSEIQAQAIL 417

Query: 433 NLRLRSLRKLEEYQIKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDL 492
           ++RL+ L  LE  +++ E   LL     ++ +L S ++    I  E+ E+KE F      
Sbjct: 418 DMRLQRLTGLEREKLQEEYKELLELIADLEDILASEERVLEIIREELEEIKEQFGDP--- 474

Query: 493 GRRRTTFCEVSRADKATLQQAMIEKEPITVVISNRGWI--------RSLKSHSVDLSALH 544
             RRT    V    +    + +I +E + V +S+ G++        R  K     +S   
Sbjct: 475 --RRTEI--VYDESEDIDIEDLIARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGAD 530

Query: 545 FKEGDSLKIALHAHTTDRILLLSTDGKAYTLPAGNL-LSGRG-HGEAIQLLIDLNHNQDI 602
            K+ D ++  L A T D +L  +  GK Y L    +  + R   G+ I  L+ L  ++ I
Sbjct: 531 MKDDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEASRTAKGKPIVNLLPLQPDERI 590

Query: 603 VTAFV----YDSTCKLLVVSSKGNAFIVEESEIIANTRKGKTFLKVSSEEKMKLVVKVTG 658
            TA +    +D    L   +  G       +E       G   +K+   +++  V   +G
Sbjct: 591 -TAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDDGDELISVRLTSG 649

Query: 659 -DHVAVVGENRKLLIFSIDQIPEMSRG----KGVRLQS 691
            D V +  +N K + F  + +  M R     +G++L++
Sbjct: 650 DDEVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKLKN 687