RPSBLAST alignment of GI: 254780353 and protein with PDBid: 1zvu

>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 3.00A {Escherichia coli} Length = 716
 Score =  583 bits (1503), Expect = e-167
 Identities = 262/724 (36%), Positives = 431/724 (59%), Gaps = 25/724 (3%)

Query: 40  ERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPHGDQSVYDSLV 99
           +RA+P + DG KPV RRI++AMSE+GL+  A FKKSAR VG+V+GK HPHGD + Y+++V
Sbjct: 2   DRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMV 61

Query: 100 RLAQPFVQRYPLISGQGNFGNIDG-DSAAAYRYTEARMTQVAELILQGVDEDAVDFRDTY 158
            +AQPF  RYPL+ GQGN+G  D   S AA RYTE+R+++ +EL+L  + +   D+   +
Sbjct: 62  LMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNF 121

Query: 159 NEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIEKLL 218
           +    EP + P++ PN+L NGT+GIAVGMAT IP HN++E+ +AA+ALID P+ ++++LL
Sbjct: 122 DGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLL 181

Query: 219 EYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARWCVEEVGRGSWCIVVTEIPYQVQ 278
           + + GPD+PT   I+ SR  I + Y  GRG  R+RA W  E+       +V++ +P+QV 
Sbjct: 182 DIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKED-----GAVVISALPHQVS 236

Query: 279 KSRLIEKIAELIIAKRIPLLEDIRDESAED--VRIVLFPKNRSLDPDLLMESIFMLSDME 336
            +R++E+IA  +  K++P+++D+RDES  +   R+V+ P++  +D D +M  +F  +D+E
Sbjct: 237 GARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLE 296

Query: 337 TRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEILKGLLIA 396
             + +N+N++ +   P V  L  IL EWL  RR+ + RR ++R++ + +R+ IL+GLL+A
Sbjct: 297 KSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVA 356

Query: 397 YLNIDEIIAIIRNEDKPKPVMVSRFSLTENQVDAILNLRLRSLRKLEEYQIKSELDNLLA 456
           +LNIDE+I IIRNED+PKP ++SRF LTE Q +AIL L+LR L KLEE +I+ E   L  
Sbjct: 357 FLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEK 416

Query: 457 EKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDLGRRRTTFCEVSRADKATLQQAMIE 516
           E++++  +L S ++  N +  E++   + +      G  R +  +     KA  +  M+ 
Sbjct: 417 ERDQLQGILASERKMNNLLKKELQADAQAY------GDDRRSPLQEREEAKAMSEHDMLP 470

Query: 517 KEPITVVISNRGWIRSLKSHSVDLSALHFKEGDSLKIALHAHTTDRILLLSTDGKAYTLP 576
            EP+T+V+S  GW+RS K H +D   L++K GDS K A+   +   ++ + + G++Y + 
Sbjct: 471 SEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAID 530

Query: 577 AGNLLSGRGHGEAIQLLIDLNHNQDIVTAFVYDSTCKLLVVSSKGNAFIVEESEIIANTR 636
              L S RG GE +   + L     +    +     KLL+ S  G  F+   ++++A  R
Sbjct: 531 PITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNR 590

Query: 637 KGKTFLKVSSEEKMKLVVKVTG--DHVAVVGENRKLLIFSIDQIPEMSRGKGVRLQSYKD 694
            GK  + +     +   V +    D +  + +  ++L+F +  +P++S+GKG ++ +   
Sbjct: 591 AGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPS 650

Query: 695 G-------GISDVICFKICEGLTWIDSAGRSYNRSENDLLGWLGKRGGVGSLVPKGFPRS 747
                   G++ +        LT      R       +L    G+RG  G+L  +G  R 
Sbjct: 651 AEAARGEDGLAQLYVLPPQSTLTIH-VGKRKIKLRPEELQKVTGERGRRGTL-MRGLQRI 708

Query: 748 GKFL 751
            +  
Sbjct: 709 DRVE 712