RPSBLAST alignment of GI: 254780353 and protein with PDBid: 3ilw

 Score =  434 bits (1118), Expect = e-122
 Identities = 182/471 (38%), Positives = 285/471 (60%), Gaps = 17/471 (3%)

Query: 36  STIKERAIPDLRDGFKPVHRRIIHAMSEMGLDFGAAFKKSARIVGEVIGKLHPHGDQSVY 95
           S I  RA+P++RDG KPVHRR+++AM + G     +  KSAR V E +G  HPHGD S+Y
Sbjct: 4   SVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSARSVAETMGNYHPHGDASIY 63

Query: 96  DSLVRLAQPFVQRYPLISGQGNFGNIDGDSAAAYRYTEARMTQVAELILQGVDEDAVDFR 155
           DSLVR+AQP+  RYPL+ GQGNFG+   D  AA RYTEAR+T +A  +L+ +DE+ VDF 
Sbjct: 64  DSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARLTPLAMEMLREIDEETVDFI 123

Query: 156 DTYNEEDSEPVVFPSKFPNLLANGTSGIAVGMATSIPSHNVQEICEAALALIDNPEISIE 215
             Y+    EP V PS+FPNLLANG+ GIAVGMAT+IP HN++E+ +A    ++N +   E
Sbjct: 124 PNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNLRELADAVFWALENHDADEE 183

Query: 216 K----LLEYIIGPDFPTGGIIVESRESIVESYRLGRGGFRVRARWCVEEVGRGSWCIVVT 271
           +    ++  + GPDFPT G+IV   +   ++Y+ GRG  R+R    VEE  RG   +V+T
Sbjct: 184 ETLAAVMGRVKGPDFPTAGLIV-GSQGTADAYKTGRGSIRMRGVVEVEEDSRGRTSLVIT 242

Query: 272 EIPYQVQKSRLIEKIAELIIAKRIPLLEDIRDESA--EDVRIVLFPKNRSLDPDLLMESI 329
           E+PYQV     I  IAE +   ++  + +I D+S+    +RIV+  K R     +++ ++
Sbjct: 243 ELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGLRIVIEIK-RDAVAKVVINNL 301

Query: 330 FMLSDMETRFPLNMNVLSMGRVPQVMPLDGILKEWLAHRREVLFRRSSFRMQAIDRRVEI 389
           +  + ++T F  NM  +  G  P+ + LD +++ ++ H+ +V+ RR+++R++  + R  I
Sbjct: 302 YKHTQLQTSFGANMLAIVDGV-PRTLRLDQLIRYYVDHQLDVIVRRTTYRLRKANERAHI 360

Query: 390 LKGLLIAYLNIDEIIAIIR---NEDKPKPVMVSRFSLTENQVDAILNLRLRSLRKLEEYQ 446
           L+GL+ A   +DE+IA+IR     D  +  ++    + E Q  AIL+++LR L  LE  +
Sbjct: 361 LRGLVKALDALDEVIALIRASETVDIARAGLIELLDIDEIQAQAILDMQLRRLAALERQR 420

Query: 447 IKSELDNLLAEKEKIDSLLNSGKQQWNQIACEIREVKEIFSKSTDLGRRRT 497
           I  +L  + AE   ++ +L   ++Q   +  E+ E+ +          RRT
Sbjct: 421 IIDDLAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDD-----RRT 466