HHsearch alignment for GI: 254780355 and conserved domain: COG0372

>COG0372 GltA Citrate synthase [Energy production and conversion].
Probab=100.00  E-value=0  Score=942.81  Aligned_cols=388  Identities=52%  Similarity=0.862  Sum_probs=370.1

Q ss_pred             CCEEECCCCCCCEEEECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             51010011558618988887862387875654334477789899319999750898999999981879998999999998
Q gi|254780355|r   27 SVLDISFLHKNGIFTYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDK  106 (429)
Q Consensus        27 ~~~d~~~l~~~G~~~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~  106 (429)
T Consensus         2 ~~~~~~~-~~~~~~~~~~Gl~~v~a~~t~is~id~~~g~L~yrGy~i~dla~~~~feev~~LLl~G~lPt~~el~~~~~~   80 (390)
T COG0372           2 DVIDIRT-SDVGRFTYDPGLEGVAACETAISYIDGDGGILRYRGYDIEDLAEKSSFEEVAYLLLYGELPTKAELAAFFAK   80 (390)
T ss_pred             CCCCCCC-CCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             8424467-776642147754554246655346658876478888068999750679999999980778971779999999


Q ss_pred             HHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             86406899899999985124765257899999998752068557678788988899999999999999999727985348
Q gi|254780355|r  107 ISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVY  186 (429)
Q Consensus       107 l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~  186 (429)
T Consensus        81 ~~~~~~~~~~~~~~~~~~p~~~hpm~~l~~~vs~l~~~~~~~~~~~~---~~~~a~rlia~~pti~a~~yr~~~g~~~i~  157 (390)
T COG0372          81 LAARRTLPEQVIRLLESLPRDAHPMAVLRTAVSALSAFYPDKLDLND---RREAALRLIAKLPTIAAAVYRYSRGEPPIA  157 (390)
T ss_pred             HHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             99866666889999985777668679999999984012421134423---478888899875589999999753898766


Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             88642468877876428984101479699999875635013678763015555442056542467767554210022203
Q gi|254780355|r  187 PRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGG  266 (429)
Q Consensus       187 Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGG  266 (429)
T Consensus       158 p~~~~s~a~nfL~ml~g~~p~~----~~~~~a~d~~LiL~ADHe~NASTftarvvaST~sd~ys~i~agi~aL~GPlHGG  233 (390)
T COG0372         158 PDPDLSYAENFLYMLFGEPPSP----PVEARAMDRALILHADHELNASTFTARVVASTGSDLYACIAAGIGALKGPLHGG  233 (390)
T ss_pred             CCCCCCHHHHHHHHHCCCCCCC----HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf             8988669999999970889996----799999999998983168871888999998617868999999998757876667


Q ss_pred             CCHHHHHHHHHCCCCCH-HHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             52899999862155351-27999999821478614302774355554034689999999888608776517999999999
Q gi|254780355|r  267 ANEEALNMLMEIGSLER-IPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELER  345 (429)
Q Consensus       267 Ane~v~~ml~~I~~~~~-v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~  345 (429)
T Consensus       234 Ane~v~~ml~ei~~~~~~~~~~v~~~l~~~~--~imGFGHRVYk~~DPRa~~lk~~a~~l~~~~g--~~~~~~~a~~~e~  309 (390)
T COG0372         234 ANEAVMKMLEEIGSSGESAEAYVRKALDRKE--RIMGFGHRVYKNYDPRAKVLKELAEKLGKELG--DLKLYEIAEELEE  309 (390)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHH
T ss_conf             5899999999962132329999999985699--76788977678999559999999999887537--5059999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             99611531457987784478899999849996685899999999899999999970789830045621058876870685
Q gi|254780355|r  346 IALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPL  425 (429)
Q Consensus       346 ~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi  425 (429)
T Consensus       310 ~~l~~~~~-~k~l~PNvDfysg~v~~~lGiP~~~fT~lFa~aR~~GW~AH~~Eq~~~~-~riiRPr~~Y~G~~~r~~~~~  387 (390)
T COG0372         310 IALEDLGF-EKKLYPNVDFYSGIVYRALGIPTDMFTPLFAIARTVGWIAHWIEQKEDG-NKIIRPRALYTGPEERDYVPI  387 (390)
T ss_pred             HHHHHHCC-CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCHHHHCCCCCCCCCCC
T ss_conf             99973322-4588877414379999981998777310455445789999999999745-884578044258665446576


Q ss_pred             HHC
Q ss_conf             542
Q gi|254780355|r  426 EER  428 (429)
Q Consensus       426 ~~R  428 (429)
T Consensus       388 ~~r  390 (390)
T COG0372         388 EER  390 (390)
T ss_pred             CCC
T ss_conf             779