HHsearch alignment for GI: 254780355 and conserved domain: KOG1254

>KOG1254 consensus.
Probab=99.48  E-value=2.2e-14  Score=119.42  Aligned_cols=217  Identities=22%  Similarity=0.314  Sum_probs=152.4

Q ss_pred             CCCCCCCCCC--CHHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHH-HHHHHCCCCCHHHHHHHH
Q ss_conf             7985348886--424688778-764289841014796999998756350136787630155-554420565424677675
Q gi|254780355|r  180 IGQPFVYPRS--DLDYASNFL-HMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTST-VRLAGSSGADPFACIAAG  255 (429)
Q Consensus       180 ~G~~~i~Pd~--~lsyaeNfL-~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft-~R~vaSt~adlysai~ag  255 (429)
T Consensus       353 rGaeviYA~~p~~~~~a~elG~gg~~Sllw~~~~lp~Ya~kfie~~~m~~aDhgp~Vsga~ntI~~~ra~kdl~sslv~g  432 (600)
T KOG1254         353 RGAEVIYADVPISLGYASELGNGGVYSLLWFQRRLPQYARKFIEICTMLTADHGPAVSGAGNTIANFRAGKDLFSSLVRG  432 (600)
T ss_pred             CCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHH
T ss_conf             87403655860555567650666057144134411789999999884216898854674167168732589999999998


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHC-CCCCHHHHHHHHHHHCCCCCEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             54210022203528999998621-553512799999982147861430277435--555403468999999988860877
Q gi|254780355|r  256 VACLGGRAHGGANEEALNMLMEI-GSLERIPHYIMRAKDKNDPFRIMGFGHRVY--RNHDPRCRIMRETMYEVLEVTGRF  332 (429)
Q Consensus       256 i~aL~GPlHGGAne~v~~ml~~I-~~~~~v~~~i~~~~~~~~~~ri~GfGHrvy--k~~DPRa~~l~~~~~~l~~~~~~~  332 (429)
T Consensus       433 Llti-gdRfggald~aaR~f~~ayd~GL~~m~fv~~~~--k~~~~V~Gighriksi~n~d~rv~~lk~~~~~~fp-----  504 (600)
T KOG1254         433 LLTI-GDRFGGALDIAARRFGPAYDKGLAPMRFVGKMR--KVPIEVYGIGHRIKSINNPDKRVEILKAFARKNFP-----  504 (600)
T ss_pred             HHHH-HHHHCCHHHHHHHHCCHHHHCCCHHHHHHHHHH--CCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHCC-----
T ss_conf             8551-012143226998861845434660788776764--78846317865444147855300328999985198-----


Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH--------------HHHHHHHHHHHHHHHHH
Q ss_conf             6517999999999996115314579877844788999998499966858--------------99999999899999999
Q gi|254780355|r  333 NDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFT--------------VLFAVARTAGWVSQWTE  398 (429)
Q Consensus       333 ~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft--------------~iFa~~R~~Gw~AH~~E  398 (429)
T Consensus       505 ~~~~~~yal~ve~~t~~----k~~nlilnvdg~i~~~fvd~l~~~g~ft~~e~~e~i~ig~lng~fvl~rsig~igh~~d  580 (600)
T KOG1254         505 ATPLLDYALEVEKITTS----KKPNLILNVDGAIAVLFVDLLRNSGMFTKEEADEYINIGALNGLFVLGRSIGFIGHYLD  580 (600)
T ss_pred             CCHHHHHHHHHEEEECC----CCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCHHHHHCC
T ss_conf             73277866532023215----78877996242278999999844687507765454320230215884201021121213


Q ss_pred             HHHCCCCCCCC
Q ss_conf             97078983004
Q gi|254780355|r  399 MIVDPSRRIGR  409 (429)
Q Consensus       399 q~~~~~~ri~R  409 (429)
T Consensus       581 qkrlkq-~lyr  590 (600)
T KOG1254         581 QKRLKQ-GLYR  590 (600)
T ss_pred             HHHHHC-CCCC
T ss_conf             766637-5323