HHsearch alignment for GI: 254780355 and conserved domain: KOG1254
>KOG1254 consensus.
Probab=99.48 E-value=2.2e-14 Score=119.42 Aligned_cols=217 Identities=22% Similarity=0.314 Sum_probs=152.4
Q ss_pred CCCCCCCCCC--CHHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHH-HHHHHCCCCCHHHHHHHH
Q ss_conf 7985348886--424688778-764289841014796999998756350136787630155-554420565424677675
Q gi|254780355|r 180 IGQPFVYPRS--DLDYASNFL-HMCFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTST-VRLAGSSGADPFACIAAG 255 (429)
Q Consensus 180 ~G~~~i~Pd~--~lsyaeNfL-~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft-~R~vaSt~adlysai~ag 255 (429)
T Consensus 353 rGaeviYA~~p~~~~~a~elG~gg~~Sllw~~~~lp~Ya~kfie~~~m~~aDhgp~Vsga~ntI~~~ra~kdl~sslv~g 432 (600)
T KOG1254 353 RGAEVIYADVPISLGYASELGNGGVYSLLWFQRRLPQYARKFIEICTMLTADHGPAVSGAGNTIANFRAGKDLFSSLVRG 432 (600)
T ss_pred CCCEEEECCCHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHH
T ss_conf 87403655860555567650666057144134411789999999884216898854674167168732589999999998
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHC-CCCCHHHHHHHHHHHCCCCCEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 54210022203528999998621-553512799999982147861430277435--555403468999999988860877
Q gi|254780355|r 256 VACLGGRAHGGANEEALNMLMEI-GSLERIPHYIMRAKDKNDPFRIMGFGHRVY--RNHDPRCRIMRETMYEVLEVTGRF 332 (429)
Q Consensus 256 i~aL~GPlHGGAne~v~~ml~~I-~~~~~v~~~i~~~~~~~~~~ri~GfGHrvy--k~~DPRa~~l~~~~~~l~~~~~~~ 332 (429)
T Consensus 433 Llti-gdRfggald~aaR~f~~ayd~GL~~m~fv~~~~--k~~~~V~Gighriksi~n~d~rv~~lk~~~~~~fp----- 504 (600)
T KOG1254 433 LLTI-GDRFGGALDIAARRFGPAYDKGLAPMRFVGKMR--KVPIEVYGIGHRIKSINNPDKRVEILKAFARKNFP----- 504 (600)
T ss_pred HHHH-HHHHCCHHHHHHHHCCHHHHCCCHHHHHHHHHH--CCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHCC-----
T ss_conf 8551-012143226998861845434660788776764--78846317865444147855300328999985198-----
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHH--------------HHHHHHHHHHHHHHHHH
Q ss_conf 6517999999999996115314579877844788999998499966858--------------99999999899999999
Q gi|254780355|r 333 NDPIAQVAIELERIALEDEYFIERKLYPNVDFYSGITLRALGFPTNLFT--------------VLFAVARTAGWVSQWTE 398 (429)
Q Consensus 333 ~~~~~~~a~~le~~a~~d~~~~~r~l~pNvDfysg~i~~~lGip~~~ft--------------~iFa~~R~~Gw~AH~~E 398 (429)
T Consensus 505 ~~~~~~yal~ve~~t~~----k~~nlilnvdg~i~~~fvd~l~~~g~ft~~e~~e~i~ig~lng~fvl~rsig~igh~~d 580 (600)
T KOG1254 505 ATPLLDYALEVEKITTS----KKPNLILNVDGAIAVLFVDLLRNSGMFTKEEADEYINIGALNGLFVLGRSIGFIGHYLD 580 (600)
T ss_pred CCHHHHHHHHHEEEECC----CCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHEECCCCCCEEEEEEECCHHHHHCC
T ss_conf 73277866532023215----78877996242278999999844687507765454320230215884201021121213
Q ss_pred HHHCCCCCCCC
Q ss_conf 97078983004
Q gi|254780355|r 399 MIVDPSRRIGR 409 (429)
Q Consensus 399 q~~~~~~ri~R 409 (429)
T Consensus 581 qkrlkq-~lyr 590 (600)
T KOG1254 581 QKRLKQ-GLYR 590 (600)
T ss_pred HHHHHC-CCCC
T ss_conf 766637-5323