HHsearch alignment for GI: 254780355 and conserved domain: PRK12351

>PRK12351 methylcitrate synthase; Provisional.
Probab=100.00  E-value=0  Score=970.08  Aligned_cols=371  Identities=39%  Similarity=0.659  Sum_probs=358.7

Q ss_pred             EECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             98888786238787565433447778989931999975089899999998187999899999999886406899899999
Q gi|254780355|r   41 TYDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQLSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRF  120 (429)
Q Consensus        41 ~~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~  120 (429)
T Consensus         7 ~~~~GL~gv~v~~S~Is~IDg~~G~L~YRGy~i~dLa~~~~fEEva~LL~~G~LPt~~el~~f~~~l~~~~~lp~~v~~~   86 (377)
T PRK12351          7 KVSKGLEGVVAGNTAISTVGGSGGDLTYRGYDIEDLAENCSFEEVAYLLLHGELPTKAELAAFKEKLRALRGLPAAVKDV   86 (377)
T ss_pred             CCCCCCCCCEEEEEECCEEECCCCEEEECCEEHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             88988899815576581464789889998934999982499999999997797939999999999999727999999999


Q ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             98512476525789999999875206855767878898889999999999999999972798534888642468877876
Q gi|254780355|r  121 FMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHM  200 (429)
Q Consensus       121 i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~M  200 (429)
T Consensus        87 l~~~p~~~hPM~~L~~~vs~L~~~~~~~~~-~~~~~~~~~a~rliA~~p~i~a~~~r~~~g~~~i~p~~~ls~a~NfL~m  165 (377)
T PRK12351         87 LESLPASAHPMDVLRTGVSALGLFDPEAED-HSPEAARDIADRLLAKLPTIVAYWYRYRHGGDPIEPRDDLSIAANFLYM  165 (377)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf             985788898078999999998732867566-9989999999999999999999999997799887898520399999998


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf             42898410147969999987563501367876301555544205654246776755421002220352899999862155
Q gi|254780355|r  201 CFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS  280 (429)
Q Consensus       201 l~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~  280 (429)
T Consensus       166 l~g~-----~p~~~~~~~l~~~LiL~ADHe~NaSTfaaRvvaST~ad~ysav~agi~aL~GPlHGGAn~~v~~ml~eI~~  240 (377)
T PRK12351        166 LHGE-----EPSELWVKAMDVSLILYAEHEFNASTFTARVIASTLSDMYSAITAAIGALKGPLHGGANEAVMEMLEEIGS  240 (377)
T ss_pred             HCCC-----CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             4589-----99989999999999987237888058999999705987899999988863676444667999999999589


Q ss_pred             CCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             35127999999821478614302774355554034689999999888608776517999999999996115314579877
Q gi|254780355|r  281 LERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLYP  360 (429)
Q Consensus       281 ~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~p  360 (429)
T Consensus       241 ~~~v~~~i~~~l~~~~--rl~GFGHrvYk~~DPRa~~l~~~~~~l~~~~~--~~~~~~~a~~ie~~~~~-----~~~l~p  311 (377)
T PRK12351        241 PEEAEAYLRKRLANKE--KIMGFGHRVYKVSDPRAKILKELAEKLAKEKG--DEKLYDIAERLEKVMWE-----EKGIFP  311 (377)
T ss_pred             CHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHH-----HCCCCC
T ss_conf             2577999999985589--76577876578999368999999999987349--84799999999999997-----379998


Q ss_pred             CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHC
Q ss_conf             84478899999849996685899999999899999999970789830045621058876870685542
Q gi|254780355|r  361 NVDFYSGITLRALGFPTNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPLEER  428 (429)
Q Consensus       361 NvDfysg~i~~~lGip~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi~~R  428 (429)
T Consensus       312 NVDfys~~l~~~lGip~~~ft~iFa~~R~~GW~AH~~Eq~~~--~~liRP~~~YvG~~~r~y~p~~~R  377 (377)
T PRK12351        312 NVDFYSGVVYHMMGIPTDLFTPIFAISRVAGWLAHIIEQRED--NRIIRPSANYVGPEDRKYVPIEER  377 (377)
T ss_pred             CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             712689999999398866788999999999999999999847--970077640149999888771129