HHsearch results for GI: 254780355 and protein with PDBid: 1csh_A

Probab=100.00  E-value=0  Score=860.10  Aligned_cols=370  Identities=29%  Similarity=0.428  Sum_probs=342.0

Q ss_pred             CCEEEECC---CCCCEEEEEEEEEEEECCCCEEEECCEEHHHHH---------HHCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             86189888---878623878756543344777898993199997---------508989999999818799989999999
Q gi|254780355|r   37 NGIFTYDP---AFSSTASCKSKITFIDGNNGILLYRGYPIEQLS---------EKSDFLEVCYLLLHGELANVSQQKDFN  104 (429)
Q Consensus        37 ~G~~~~dp---G~~~ta~ceS~IT~IDG~~G~L~YRGY~IedLa---------~~~sFeEVayLLl~GeLPt~~el~~F~  104 (429)
                      .|.+|+|+   |+.++.+|.|.||+|||++| |+||||+|+||+         ++++||||+||||||+|||++||++|+
T Consensus        31 vg~it~d~~~gGlrG~~~~~t~iS~iD~~~G-l~YRGy~I~eL~~~l~k~~~~e~~~fEEv~yLLl~G~LPt~~eL~~f~  109 (435)
T 1csh_A           31 VGQITVDMSYGGMRGMKGLIYETSVLDPDEG-IRFRGFSIPECQKLLPKAGGGEEPLPEGLFWLLVTGQIPTPEQVSWVS  109 (435)
T ss_dssp             CCCCCHHHHHTTTTTCCCCCCCSEEEETTTE-EEETTEEHHHHHHHSCBCTTCCSBCHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred             EEEEEECCCCCCCCCCCEEEEECEEECCCCC-EEECCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             4446631003655798625765704778774-257991089998774204565668799999999838796999999999


Q ss_pred             HHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9886406899899999985124765257899999998752068557-------678788988899999999999999999
Q gi|254780355|r  105 DKISRHALLNENMSRFFMGFPSSAHPMAMLVSAVGALSSFYYSPSG-------VQDLEQCVNVSLRMIAKISTIAAMIYK  177 (429)
Q Consensus       105 ~~l~~~~~lpe~v~~~i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~-------~~d~~~~~~~a~rLiA~~p~i~A~~yr  177 (429)
                      .+|++++.+|+++.+++++||+++|||++|+++|++|+++++...+       ..+++..++.++||+|++|+|+|++||
T Consensus       110 ~~L~~~~~lp~~v~~~l~~~P~~~hPM~~L~~~vsaL~~~~~~~~~~~~~~~~~~~~e~~~~~~~~liAk~p~i~A~~yr  189 (435)
T 1csh_A          110 KEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGINRTKYWEFVYEDAMDLIAKLPCVAAKIYR  189 (435)
T ss_dssp             HHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998258979999999858999991999999999850667530001232232103677899999999999999999999


Q ss_pred             --HHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEECCCC-CCCHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             --72798534888642468877876428984101479699999875635013678-763015555442056542467767
Q gi|254780355|r  178 --YSIGQPFVYPRSDLDYASNFLHMCFSVPCAEYQVNPLLARAMNRIFILHADHE-QNASTSTVRLAGSSGADPFACIAA  254 (429)
Q Consensus       178 --~~~G~~~i~Pd~~lsyaeNfL~Ml~~~~~~~~~~~~~~~~ald~~LILhADHe-~NaSTft~R~vaSt~adlysai~a  254 (429)
                        ++.|+++++||++++|++|||+||++       ++|..+|+||++|||||||| +||||||+|||+||++|+|+||+|
T Consensus       190 ~~~~~g~~~~~pd~~l~~a~nfl~ml~~-------~~p~~~~~ld~~LiLhADHeg~n~StfaarvvaSt~sd~ysavaa  262 (435)
T 1csh_A          190 NLYRAGSSIGAIDSKLDWSHNFTNMLGY-------TDPQFTELMRLYLTIHSDHEGGNVSAHTSHLVGSALSDPYLSFAA  262 (435)
T ss_dssp             HHHSTTCCCCCCCTTSCHHHHHHHHHTC-------CCHHHHHHHHHHHHHTSCCCSCSHHHHHHHHHHTTTCCHHHHHHH
T ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHCCC-------CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCHHHHHHH
T ss_conf             9822899888889876699999986279-------980799999999999711568874323421000477407899999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHC-------CCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             554210022203528999998621-------5535127999999821478614302774355554034689999999888
Q gi|254780355|r  255 GVACLGGRAHGGANEEALNMLMEI-------GSLERIPHYIMRAKDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLE  327 (429)
Q Consensus       255 gi~aL~GPlHGGAne~v~~ml~~I-------~~~~~v~~~i~~~~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~  327 (429)
                      ||+|||||+||||||+|++||++|       ++++++++||++.+++++  |||||||||||++|||+++|++++.+++.
T Consensus       263 ai~al~GplHGGAne~v~~~l~~i~~~~~~~~~~~~~~~~v~~~l~~~~--~i~GfGHrvyk~~DPRa~~l~~~a~~~~~  340 (435)
T 1csh_A          263 AMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGR--VVPGYGHAVLRKTDPRYTCQREFALKHLP  340 (435)
T ss_dssp             HHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTC--CCTTBCCSSCCSCCHHHHHHHHHHHHHCT
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC--EEECCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             8886139744675899999999998634888788899999998652587--42056875578899518999999998706


Q ss_pred             HCCCCCCHHHHHHHHHHHHHHH--HHHCCCCCCCCCCCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             6087765179999999999961--153145798778447889999984999-6685899999999899999999970789
Q gi|254780355|r  328 VTGRFNDPIAQVAIELERIALE--DEYFIERKLYPNVDFYSGITLRALGFP-TNLFTVLFAVARTAGWVSQWTEMIVDPS  404 (429)
Q Consensus       328 ~~~~~~~~~~~~a~~le~~a~~--d~~~~~r~l~pNvDfysg~i~~~lGip-~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~  404 (429)
                           ++++++++.++++++.+  +++|..|+||||||||||++|++|||| .+|||+||++||++||+|||+||++.. 
T Consensus       341 -----~~~~~~~~~~l~~~~~~~~~e~~~~k~l~pNVDfysg~v~~~lGip~~~~ft~iFa~sR~~Gw~AH~~Eq~~~~-  414 (435)
T 1csh_A          341 -----SDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALG-  414 (435)
T ss_dssp             -----TCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_conf             -----48236999999999999999864668998782359999999839996024589999999999999999999628-


Q ss_pred             CCCCCCCCCCCCCCCCCC
Q ss_conf             830045621058876870
Q gi|254780355|r  405 RRIGRPRQLYTGALKRDY  422 (429)
Q Consensus       405 ~ri~RP~~~Y~G~~~r~y  422 (429)
                      +||+||||+|||+.+|-+
T Consensus       415 ~~i~RP~~~Y~G~~~r~~  432 (435)
T 1csh_A          415 FPLERPKSMSTAGLEKLS  432 (435)
T ss_dssp             CCCCCCCCCCHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHCC
T ss_conf             996788865778265336