HHsearch results for GI: 254780355 and protein with PDBid: 2ifc_A
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=0 Score=810.37 Aligned_cols=375 Identities=30% Similarity=0.530 Sum_probs=349.4
Q ss_pred ECCCCCCEEEEEEEEEEEECCCCEEEECCEEHHH-HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 8888786238787565433447778989931999-975089899999998187999899999999886406899899999
Q gi|254780355|r 42 YDPAFSSTASCKSKITFIDGNNGILLYRGYPIEQ-LSEKSDFLEVCYLLLHGELANVSQQKDFNDKISRHALLNENMSRF 120 (429)
Q Consensus 42 ~dpG~~~ta~ceS~IT~IDG~~G~L~YRGY~Ied-La~~~sFeEVayLLl~GeLPt~~el~~F~~~l~~~~~lpe~v~~~ 120 (429)
+||||.+|.+|+|+||+|||++|+|+||||+|+| |+++++||||+||||+|+|||++|+++|+.+|++++.+|+++.++
T Consensus 7 ~~~GL~gv~~~~t~is~idg~~G~L~YRG~~i~dLla~~~~fEeVa~LL~~G~lPt~~el~~f~~~l~~~~~lp~~v~~~ 86 (385)
T 2ifc_A 7 ISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGAQDEEIQYLFLYGNLPTEQELRKYKETVQKGYKIPDFVINA 86 (385)
T ss_dssp BCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTCCHHHHHHHHHHSSCCCHHHHHHHHHHHHGGGCCCHHHHHH
T ss_pred CCCCCCCCCEEEEECCEEECCCCEEEECCEEHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 89887998050577905868988799978759999843899999999998488989999999999999716783999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 98512476525789999999875206855767878898889999999999999999972798534888642468877876
Q gi|254780355|r 121 FMGFPSSAHPMAMLVSAVGALSSFYYSPSGVQDLEQCVNVSLRMIAKISTIAAMIYKYSIGQPFVYPRSDLDYASNFLHM 200 (429)
Q Consensus 121 i~~~p~~ahPM~~L~~~vsaL~a~~~~~~~~~d~~~~~~~a~rLiA~~p~i~A~~yr~~~G~~~i~Pd~~lsyaeNfL~M 200 (429)
++.+|+++|||++++++++++++.++.... +.+...+.+.|++|++|++++++|++..|.++..|+++++|++|||+|
T Consensus 87 i~~~p~~~~pm~~l~~ai~~l~~~~~~~~~--~~~~~~~~a~~l~a~~p~i~a~~~~~~~~~~~~~p~~~~~~a~~~l~m 164 (385)
T 2ifc_A 87 IRQLPRESDAVAMQMAAVAAMAASETKFKW--NKDTDRDVAAEMIGRMSAITVNVYRHIMNMPAELPKPSDSYAESFLNA 164 (385)
T ss_dssp HHTSCTTSCHHHHHHHHHHHHHHHCTTCCC--CTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 972887688178888888876532112343--257777569989999999999999986489877887544647777776
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf 42898410147969999987563501367876301555544205654246776755421002220352899999862155
Q gi|254780355|r 201 CFSVPCAEYQVNPLLARAMNRIFILHADHEQNASTSTVRLAGSSGADPFACIAAGVACLGGRAHGGANEEALNMLMEIGS 280 (429)
Q Consensus 201 l~~~~~~~~~~~~~~~~ald~~LILhADHe~NaSTft~R~vaSt~adlysai~agi~aL~GPlHGGAne~v~~ml~~I~~ 280 (429)
+++. .+++..+++||++||||||||+|+||||+|+++||++|+|+|++||+++|+||+|||||++|++||+++++
T Consensus 165 ~~g~-----~~~~~~~~~l~~~Lvl~aDHg~n~St~aar~~aSt~ad~y~~v~aa~~al~Gplhgga~~~~~~~l~~~~~ 239 (385)
T 2ifc_A 165 AFGR-----KATKEEIDAMNTALILYTDHEVPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGAAEAAIAQFDEIKD 239 (385)
T ss_dssp HHTS-----CCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSHHHHHHHHHHHHCS
T ss_pred HCCC-----CCCHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 4378-----79889999999999895468998732102022025873889998764302454466601558899998544
Q ss_pred CCHHHHHHHHH-HHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 35127999999-82147861430277435555403468999999988860877651799999999999611531457987
Q gi|254780355|r 281 LERIPHYIMRA-KDKNDPFRIMGFGHRVYRNHDPRCRIMRETMYEVLEVTGRFNDPIAQVAIELERIALEDEYFIERKLY 359 (429)
Q Consensus 281 ~~~v~~~i~~~-~~~~~~~ri~GfGHrvyk~~DPRa~~l~~~~~~l~~~~~~~~~~~~~~a~~le~~a~~d~~~~~r~l~ 359 (429)
++++++++.+. +++++ |||||||||||..|||+++|++++.++..... ..+++++++.++|+++. +++.+|++|
T Consensus 240 ~~~~~~~~~~~~~~~~~--~ipGfGH~v~~~~DPRa~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~k~l~ 314 (385)
T 2ifc_A 240 PAMVEKWFNDNIINGKK--RLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKP-EVHKVYEIATKLEDFGI--KAFGSKGIY 314 (385)
T ss_dssp GGGHHHHHHHHTTTSSS--CCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHH--HHHGGGTCC
T ss_pred HHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHH--HHCCCCCCC
T ss_conf 65567899999862123--46576876578889769999999999986147-40489999999999999--732457988
Q ss_pred CCCCHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCC
Q ss_conf 78447889999984999--66858999999998999999999707898300456210588768706855429
Q gi|254780355|r 360 PNVDFYSGITLRALGFP--TNLFTVLFAVARTAGWVSQWTEMIVDPSRRIGRPRQLYTGALKRDYVPLEERE 429 (429)
Q Consensus 360 pNvDfysg~i~~~lGip--~~~ft~iFa~~R~~Gw~AH~~Eq~~~~~~ri~RP~~~Y~G~~~r~y~pi~~R~ 429 (429)
||||||+|++|+.+||| +++||++|++||++||+|||+||++++ +||+||+++|+||.+|+|+||++||
T Consensus 315 pNvD~~~~~l~~~lglp~~~~~~t~lf~i~R~~G~~AH~~Eq~~~~-~~i~RP~~~Y~G~~~r~y~p~~~r~ 385 (385)
T 2ifc_A 315 PNTDYFSGIVYMSIGFPLRNNIYTALFALSRVTGWQAHFIEYVEEQ-QRLIRPRAVYVGPAERKYVPIAERK 385 (385)
T ss_dssp BCTTTTHHHHHHHHTCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEECSCCCCCCCCGGGC-
T ss_pred CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCHHHCC
T ss_conf 7818999999998599983105689999999999999999998568-9863776522699889997767569